BLASTX nr result
ID: Atropa21_contig00018271
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00018271 (508 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006349361.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 104 1e-20 ref|XP_006349362.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 59 7e-07 ref|XP_004230479.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 59 7e-07 >ref|XP_006349361.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X1 [Solanum tuberosum] Length = 316 Score = 104 bits (259), Expect = 1e-20 Identities = 55/68 (80%), Positives = 59/68 (86%), Gaps = 1/68 (1%) Frame = +3 Query: 21 AVKMLLMCLITLPLHYPRCYIWLGYIFNESVSAM*GK*LQ-ILLLIDSWQLMKQIFVVKS 197 AVKM LMCLI LPLHYP+CYIWLG IF+E VSAM GK L+ ILLLIDS QL+KQIFVV S Sbjct: 248 AVKMSLMCLIILPLHYPQCYIWLGCIFDEGVSAMLGKWLRLILLLIDSCQLVKQIFVVNS 307 Query: 198 LWSLKILD 221 LWSLKILD Sbjct: 308 LWSLKILD 315 >ref|XP_006349362.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X2 [Solanum tuberosum] Length = 310 Score = 58.9 bits (141), Expect = 7e-07 Identities = 29/44 (65%), Positives = 32/44 (72%) Frame = +2 Query: 2 FDFLRIGRQNVIDVFDYSAIAXXXXXXXXXXXXQRKRFRHVREI 133 FDFLRIGRQNVIDVFDYSAIA +R+RFRHVRE+ Sbjct: 259 FDFLRIGRQNVIDVFDYSAIALSSVLYLVGLYLRRRRFRHVREM 302 >ref|XP_004230479.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Solanum lycopersicum] Length = 312 Score = 58.9 bits (141), Expect = 7e-07 Identities = 29/44 (65%), Positives = 32/44 (72%) Frame = +2 Query: 2 FDFLRIGRQNVIDVFDYSAIAXXXXXXXXXXXXQRKRFRHVREI 133 FDFLRIGRQNVIDVFDYSAIA +R+RFRHVRE+ Sbjct: 261 FDFLRIGRQNVIDVFDYSAIALSSVLYLVGLYLRRRRFRHVREM 304