BLASTX nr result

ID: Atropa21_contig00018269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00018269
         (696 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353009.1| PREDICTED: KRR1 small subunit processome com...   182   7e-44
ref|XP_004233160.1| PREDICTED: KRR1 small subunit processome com...   182   9e-44
gb|EOY32827.1| RNA-binding KH domain-containing protein [Theobro...   122   1e-25
gb|EXC41712.1| hypothetical protein L484_000599 [Morus notabilis]     122   1e-25
emb|CBI22501.3| unnamed protein product [Vitis vinifera]              118   2e-24
ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mi...   118   2e-24
ref|XP_006478051.1| PREDICTED: KRR1 small subunit processome com...   117   3e-24
ref|XP_006441061.1| hypothetical protein CICLE_v10020638mg [Citr...   116   8e-24
ref|XP_004491162.1| PREDICTED: KRR1 small subunit processome com...   112   1e-22
ref|XP_004491161.1| PREDICTED: KRR1 small subunit processome com...   112   1e-22
gb|AFK40254.1| unknown [Medicago truncatula]                          112   1e-22
ref|XP_003617063.1| KRR1 small subunit processome component-like...   112   1e-22
ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycin...   112   1e-22
ref|NP_196459.1| RNA-binding KH domain-containing protein [Arabi...   111   2e-22
ref|XP_002871325.1| hypothetical protein ARALYDRAFT_487679 [Arab...   111   3e-22
ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putativ...   111   3e-22
ref|XP_003519473.1| PREDICTED: KRR1 small subunit processome com...   109   7e-22
gb|AAM64563.1| rev interacting protein mis3-like [Arabidopsis th...   109   7e-22
ref|XP_002310107.1| hypothetical protein POPTR_0007s08410g [Popu...   109   1e-21
ref|XP_004159171.1| PREDICTED: KRR1 small subunit processome com...   107   5e-21

>ref|XP_006353009.1| PREDICTED: KRR1 small subunit processome component homolog [Solanum
           tuberosum]
          Length = 382

 Score =  182 bits (463), Expect = 7e-44
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = -1

Query: 696 QQLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDK 517
           QQLESGEYFLSDKKK AKQWEEKQVKQAEKVAENKKKREEAFVPPEEPK HNQDVSN+D+
Sbjct: 276 QQLESGEYFLSDKKKMAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKTHNQDVSNVDE 335

Query: 516 DDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSKTSK 397
           DDVTAMASSLK+KAKEFRKQKSIDKIDA EFIAG SK SK
Sbjct: 336 DDVTAMASSLKRKAKEFRKQKSIDKIDAEEFIAGPSKPSK 375


>ref|XP_004233160.1| PREDICTED: KRR1 small subunit processome component homolog [Solanum
           lycopersicum]
          Length = 382

 Score =  182 bits (462), Expect = 9e-44
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = -1

Query: 696 QQLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDK 517
           QQLESGEYFLSDKKK AKQWEEKQVKQAEKVAENKKKREEAFVPPEEPK HNQDVSN+DK
Sbjct: 276 QQLESGEYFLSDKKKMAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKTHNQDVSNVDK 335

Query: 516 DDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSKTSK 397
           DDVTAMASSLK+KAKEFRKQKSIDKI+A EFIAG SK SK
Sbjct: 336 DDVTAMASSLKRKAKEFRKQKSIDKINAEEFIAGPSKPSK 375


>gb|EOY32827.1| RNA-binding KH domain-containing protein [Theobroma cacao]
          Length = 445

 Score =  122 bits (306), Expect = 1e-25
 Identities = 59/93 (63%), Positives = 74/93 (79%)
 Frame = -1

Query: 696 QQLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDK 517
           Q+LESGEYFLS+KKK AK+W+EKQ KQA+K AENK+KREE+FVPP+EP + +   S  DK
Sbjct: 336 QELESGEYFLSEKKKLAKKWQEKQEKQAQKTAENKRKREESFVPPKEPVKQDSRESENDK 395

Query: 516 DDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIA 418
           +DV  +  SLK+KAKEF KQKS   I+A E+IA
Sbjct: 396 EDVAVLTMSLKQKAKEFGKQKSFQNINAEEYIA 428


>gb|EXC41712.1| hypothetical protein L484_000599 [Morus notabilis]
          Length = 367

 Score =  122 bits (305), Expect = 1e-25
 Identities = 61/92 (66%), Positives = 75/92 (81%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKD 514
           QLE+GEYFLSDK KSAK+W+EKQ KQAEK AENK+KRE AFVPPEEP + +++V N D +
Sbjct: 261 QLETGEYFLSDKTKSAKKWQEKQEKQAEKTAENKRKREAAFVPPEEPVKQDRNVKN-DAE 319

Query: 513 DVTAMASSLKKKAKEFRKQKSIDKIDAVEFIA 418
           DV AMA SLKKKAKEF KQK  + ++A  ++A
Sbjct: 320 DVAAMAKSLKKKAKEFGKQKMDETVNAEAYLA 351


>emb|CBI22501.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  118 bits (296), Expect = 2e-24
 Identities = 60/96 (62%), Positives = 73/96 (76%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKD 514
           QLESGEYFLSD+KK AK+W++K  KQAEK AENK+KRE AFVPP EP   +   S  DK+
Sbjct: 314 QLESGEYFLSDQKKFAKKWQQKLEKQAEKTAENKRKREAAFVPPMEPMVQDPSKSADDKN 373

Query: 513 DVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
           DV AMA SLKKKAKEF KQKS++ ++   +IA S +
Sbjct: 374 DVAAMAMSLKKKAKEFGKQKSLENVNPETYIAASGE 409


>ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Vitis
           vinifera]
          Length = 386

 Score =  118 bits (296), Expect = 2e-24
 Identities = 60/96 (62%), Positives = 73/96 (76%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKD 514
           QLESGEYFLSD+KK AK+W++K  KQAEK AENK+KRE AFVPP EP   +   S  DK+
Sbjct: 276 QLESGEYFLSDQKKFAKKWQQKLEKQAEKTAENKRKREAAFVPPMEPMVQDPSKSADDKN 335

Query: 513 DVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
           DV AMA SLKKKAKEF KQKS++ ++   +IA S +
Sbjct: 336 DVAAMAMSLKKKAKEFGKQKSLENVNPETYIAASGE 371


>ref|XP_006478051.1| PREDICTED: KRR1 small subunit processome component homolog [Citrus
           sinensis]
          Length = 376

 Score =  117 bits (293), Expect = 3e-24
 Identities = 56/95 (58%), Positives = 72/95 (75%)
 Frame = -1

Query: 690 LESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKDD 511
           LESGEYFLS++KK +K+W+EKQ KQAEK AENK+KR+ AF+PPEEP R N   +    +D
Sbjct: 273 LESGEYFLSERKKESKKWQEKQEKQAEKTAENKRKRDAAFIPPEEPSRQNSSEAEDKTND 332

Query: 510 VTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
           V AMA SLK+KAK+ RKQK  + I+  E+IA S +
Sbjct: 333 VAAMAKSLKEKAKKLRKQKFAENINPEEYIAASGE 367


>ref|XP_006441061.1| hypothetical protein CICLE_v10020638mg [Citrus clementina]
           gi|557543323|gb|ESR54301.1| hypothetical protein
           CICLE_v10020638mg [Citrus clementina]
          Length = 376

 Score =  116 bits (290), Expect = 8e-24
 Identities = 56/95 (58%), Positives = 72/95 (75%)
 Frame = -1

Query: 690 LESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKDD 511
           LESGEYFLS++KK +K+W+EKQ KQAEK AENK+KR+ AF+PPEEP R N   +    +D
Sbjct: 273 LESGEYFLSERKKESKKWQEKQEKQAEKTAENKRKRDAAFIPPEEPSRQNSCEAEDKTND 332

Query: 510 VTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
           V AMA SLK+KAK+ RKQK  + I+  E+IA S +
Sbjct: 333 VAAMAKSLKEKAKKLRKQKFAENINPEEYIAASGE 367


>ref|XP_004491162.1| PREDICTED: KRR1 small subunit processome component homolog [Cicer
           arietinum]
          Length = 382

 Score =  112 bits (280), Expect = 1e-22
 Identities = 57/98 (58%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMD-- 520
           QLE+GEYF+++KKKSAK+W+E+Q KQAEK AENK+KREEAF+PP+E   H + V N +  
Sbjct: 276 QLETGEYFMTEKKKSAKKWQERQEKQAEKTAENKRKREEAFIPPKE---HAKPVDNSEDA 332

Query: 519 KDDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
            ++V+ MA SLKKKAK+F K+KS + I+A  +I GSS+
Sbjct: 333 NNNVSEMAKSLKKKAKKFEKRKSEENINAETYIMGSSE 370


>ref|XP_004491161.1| PREDICTED: KRR1 small subunit processome component homolog [Cicer
           arietinum]
          Length = 382

 Score =  112 bits (280), Expect = 1e-22
 Identities = 58/98 (59%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMD-- 520
           QLE+GEYF+++KKKSAK+W+E+Q KQAEK AENK+KREEAF+PP+E   H + V N D  
Sbjct: 276 QLETGEYFMTEKKKSAKKWQERQEKQAEKTAENKRKREEAFIPPKE---HAKPVDNSDDA 332

Query: 519 KDDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
            ++V+ MA SLKKKAK+F K+KS + I+A  +I GSS+
Sbjct: 333 TNNVSEMAMSLKKKAKKFGKRKSEENINAETYIMGSSE 370


>gb|AFK40254.1| unknown [Medicago truncatula]
          Length = 380

 Score =  112 bits (280), Expect = 1e-22
 Identities = 58/98 (59%), Positives = 78/98 (79%), Gaps = 3/98 (3%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKR---HNQDVSNM 523
           QLE+GEYFLSDKKKSAK+W+E+QV+QAEK AENK+KR+E+FVPP+EP     +++D SN 
Sbjct: 274 QLETGEYFLSDKKKSAKKWQERQVQQAEKTAENKRKRDESFVPPKEPANLVGNSEDASN- 332

Query: 522 DKDDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSS 409
              +V  MA SLK+KA++F K+KS + I+A  +I GSS
Sbjct: 333 ---NVAEMAMSLKEKARKFGKRKSEENINAETYIMGSS 367


>ref|XP_003617063.1| KRR1 small subunit processome component-like protein [Medicago
           truncatula] gi|355518398|gb|AET00022.1| KRR1 small
           subunit processome component-like protein [Medicago
           truncatula]
          Length = 424

 Score =  112 bits (280), Expect = 1e-22
 Identities = 58/98 (59%), Positives = 78/98 (79%), Gaps = 3/98 (3%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKR---HNQDVSNM 523
           QLE+GEYFLSDKKKSAK+W+E+QV+QAEK AENK+KR+E+FVPP+EP     +++D SN 
Sbjct: 318 QLETGEYFLSDKKKSAKKWQERQVQQAEKTAENKRKRDESFVPPKEPANLVGNSEDASN- 376

Query: 522 DKDDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSS 409
              +V  MA SLK+KA++F K+KS + I+A  +I GSS
Sbjct: 377 ---NVAEMAMSLKEKARKFGKRKSEENINAETYIMGSS 411


>ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycine max]
           gi|255639399|gb|ACU19995.1| unknown [Glycine max]
          Length = 389

 Score =  112 bits (279), Expect = 1e-22
 Identities = 59/96 (61%), Positives = 74/96 (77%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKD 514
           QLE+GEYFLS+K+KSAK W+EKQ KQAEK AENK+KREEAF+PP+EP  +  D S    +
Sbjct: 283 QLETGEYFLSNKRKSAKIWQEKQEKQAEKTAENKRKREEAFIPPKEP-ANLVDKSEDANN 341

Query: 513 DVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
           +V  MA SLKKK K+F K+KS + IDA  +I GSS+
Sbjct: 342 NVADMAISLKKKTKKFGKRKSEENIDAETYIVGSSE 377


>ref|NP_196459.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
           gi|13878039|gb|AAK44097.1|AF370282_1 putative rev
           interacting protein mis3 [Arabidopsis thaliana]
           gi|10178284|emb|CAC08342.1| rev interacting protein
           mis3-like [Arabidopsis thaliana]
           gi|23296614|gb|AAN13132.1| putative rev interacting
           protein mis3 [Arabidopsis thaliana]
           gi|332003916|gb|AED91299.1| RNA-binding KH
           domain-containing protein [Arabidopsis thaliana]
          Length = 391

 Score =  111 bits (278), Expect = 2e-22
 Identities = 53/101 (52%), Positives = 77/101 (76%), Gaps = 3/101 (2%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMD-- 520
           QLESGEYF+SDKKKS K+W+EKQ KQ+EK  ENK+KR+ +F+PPEEP  +N + +  +  
Sbjct: 279 QLESGEYFMSDKKKSEKKWQEKQEKQSEKSTENKRKRDASFLPPEEPMNNNSNANKSEDG 338

Query: 519 KDDVTAMASSLKKKAKEFRKQKSI-DKIDAVEFIAGSSKTS 400
           K+D+T + +SLK K KE +KQK   ++++A E+IAG S ++
Sbjct: 339 KNDITELTNSLKSKTKELKKQKKTHERVNAEEYIAGPSSSA 379


>ref|XP_002871325.1| hypothetical protein ARALYDRAFT_487679 [Arabidopsis lyrata subsp.
           lyrata] gi|297317162|gb|EFH47584.1| hypothetical protein
           ARALYDRAFT_487679 [Arabidopsis lyrata subsp. lyrata]
          Length = 391

 Score =  111 bits (277), Expect = 3e-22
 Identities = 55/102 (53%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMD-- 520
           QLESGEYF+SDKKKS K+W EKQ KQ EK  ENK+KR+ +F+PPEEP  +N   +N +  
Sbjct: 279 QLESGEYFMSDKKKSEKKWLEKQEKQTEKSTENKRKRDASFLPPEEPMNNNSKANNSEDG 338

Query: 519 KDDVTAMASSLKKKAKEFRKQKSI-DKIDAVEFIAGSSKTSK 397
           K+D+T +  SLK K KE +KQK   ++++A E+IAG S   K
Sbjct: 339 KNDITELTQSLKSKTKELKKQKKTHERVNAEEYIAGPSSIDK 380


>ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putative [Ricinus communis]
           gi|223547313|gb|EEF48808.1| Ribosomal RNA assembly
           protein mis3, putative [Ricinus communis]
          Length = 377

 Score =  111 bits (277), Expect = 3e-22
 Identities = 53/100 (53%), Positives = 76/100 (76%)
 Frame = -1

Query: 696 QQLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDK 517
           ++LESGEYFL+++KK AK+W+EKQ +QAEK AENK+KR+ AFVPPEE +  +   S    
Sbjct: 269 RELESGEYFLNNQKKQAKKWQEKQERQAEKTAENKRKRDTAFVPPEEHRDQDAGKSEDKN 328

Query: 516 DDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSKTSK 397
           +DV A+A S+KKKAK+F K+ +++ I+A E+IA S +  K
Sbjct: 329 NDVAAIALSIKKKAKDFGKKNAVENINAEEYIAASGELPK 368


>ref|XP_003519473.1| PREDICTED: KRR1 small subunit processome component homolog [Glycine
           max]
          Length = 389

 Score =  109 bits (273), Expect = 7e-22
 Identities = 58/96 (60%), Positives = 73/96 (76%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKD 514
           QLE+GEYFLS+K+KSAK W+EKQ KQAEK AENK+KREEAF+PP+EP  +  D S     
Sbjct: 283 QLETGEYFLSNKRKSAKIWQEKQEKQAEKTAENKRKREEAFIPPKEP-ANLVDKSEDANS 341

Query: 513 DVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
           +V  MA SLKKK K+F K+KS + I+A  +I GSS+
Sbjct: 342 NVADMAMSLKKKTKKFGKRKSEENINAETYIIGSSE 377


>gb|AAM64563.1| rev interacting protein mis3-like [Arabidopsis thaliana]
          Length = 391

 Score =  109 bits (273), Expect = 7e-22
 Identities = 52/101 (51%), Positives = 76/101 (75%), Gaps = 3/101 (2%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMD-- 520
           QLESGEYF+ DKKKS K+W+EKQ KQ+EK  ENK+KR+ +F+PPEEP  +N + +  +  
Sbjct: 279 QLESGEYFMRDKKKSEKKWQEKQEKQSEKSTENKRKRDASFLPPEEPMNNNSNANKSEDG 338

Query: 519 KDDVTAMASSLKKKAKEFRKQKSI-DKIDAVEFIAGSSKTS 400
           K+D+T + +SLK K KE +KQK   ++++A E+IAG S ++
Sbjct: 339 KNDITELTNSLKSKTKELKKQKKTHERVNAEEYIAGPSSSA 379


>ref|XP_002310107.1| hypothetical protein POPTR_0007s08410g [Populus trichocarpa]
           gi|222853010|gb|EEE90557.1| hypothetical protein
           POPTR_0007s08410g [Populus trichocarpa]
          Length = 379

 Score =  109 bits (272), Expect = 1e-21
 Identities = 57/96 (59%), Positives = 69/96 (71%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKD 514
           QLE+GEYFLSDKKK AK+W EKQ KQ EK AENK+KR+ AFVPP+E      D    +  
Sbjct: 278 QLETGEYFLSDKKKQAKKWHEKQEKQLEKTAENKRKRDAAFVPPKEDPSTYAD----NNK 333

Query: 513 DVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
           DV AMA SLKKKAKEF KQKS + ++  ++IA S +
Sbjct: 334 DVAAMAMSLKKKAKEFGKQKSFENVNPEDYIATSGE 369


>ref|XP_004159171.1| PREDICTED: KRR1 small subunit processome component homolog [Cucumis
           sativus]
          Length = 379

 Score =  107 bits (266), Expect = 5e-21
 Identities = 55/96 (57%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
 Frame = -1

Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEE-PKRHNQDVSNMDK 517
           QLE+GEYFL++KKKSAK+W++KQ KQAEK A+NK+KRE AFVPP+E PK+  +   + DK
Sbjct: 273 QLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAAFVPPKEAPKQDTK--PDGDK 330

Query: 516 DDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSS 409
           +D+  MA SLK+KAK F K+K+ + I+   +IA SS
Sbjct: 331 NDIAEMAKSLKEKAKAFGKRKAAETINPEAYIASSS 366


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