BLASTX nr result
ID: Atropa21_contig00018269
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00018269
(696 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353009.1| PREDICTED: KRR1 small subunit processome com... 182 7e-44
ref|XP_004233160.1| PREDICTED: KRR1 small subunit processome com... 182 9e-44
gb|EOY32827.1| RNA-binding KH domain-containing protein [Theobro... 122 1e-25
gb|EXC41712.1| hypothetical protein L484_000599 [Morus notabilis] 122 1e-25
emb|CBI22501.3| unnamed protein product [Vitis vinifera] 118 2e-24
ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mi... 118 2e-24
ref|XP_006478051.1| PREDICTED: KRR1 small subunit processome com... 117 3e-24
ref|XP_006441061.1| hypothetical protein CICLE_v10020638mg [Citr... 116 8e-24
ref|XP_004491162.1| PREDICTED: KRR1 small subunit processome com... 112 1e-22
ref|XP_004491161.1| PREDICTED: KRR1 small subunit processome com... 112 1e-22
gb|AFK40254.1| unknown [Medicago truncatula] 112 1e-22
ref|XP_003617063.1| KRR1 small subunit processome component-like... 112 1e-22
ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycin... 112 1e-22
ref|NP_196459.1| RNA-binding KH domain-containing protein [Arabi... 111 2e-22
ref|XP_002871325.1| hypothetical protein ARALYDRAFT_487679 [Arab... 111 3e-22
ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putativ... 111 3e-22
ref|XP_003519473.1| PREDICTED: KRR1 small subunit processome com... 109 7e-22
gb|AAM64563.1| rev interacting protein mis3-like [Arabidopsis th... 109 7e-22
ref|XP_002310107.1| hypothetical protein POPTR_0007s08410g [Popu... 109 1e-21
ref|XP_004159171.1| PREDICTED: KRR1 small subunit processome com... 107 5e-21
>ref|XP_006353009.1| PREDICTED: KRR1 small subunit processome component homolog [Solanum
tuberosum]
Length = 382
Score = 182 bits (463), Expect = 7e-44
Identities = 92/100 (92%), Positives = 95/100 (95%)
Frame = -1
Query: 696 QQLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDK 517
QQLESGEYFLSDKKK AKQWEEKQVKQAEKVAENKKKREEAFVPPEEPK HNQDVSN+D+
Sbjct: 276 QQLESGEYFLSDKKKMAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKTHNQDVSNVDE 335
Query: 516 DDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSKTSK 397
DDVTAMASSLK+KAKEFRKQKSIDKIDA EFIAG SK SK
Sbjct: 336 DDVTAMASSLKRKAKEFRKQKSIDKIDAEEFIAGPSKPSK 375
>ref|XP_004233160.1| PREDICTED: KRR1 small subunit processome component homolog [Solanum
lycopersicum]
Length = 382
Score = 182 bits (462), Expect = 9e-44
Identities = 92/100 (92%), Positives = 95/100 (95%)
Frame = -1
Query: 696 QQLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDK 517
QQLESGEYFLSDKKK AKQWEEKQVKQAEKVAENKKKREEAFVPPEEPK HNQDVSN+DK
Sbjct: 276 QQLESGEYFLSDKKKMAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKTHNQDVSNVDK 335
Query: 516 DDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSKTSK 397
DDVTAMASSLK+KAKEFRKQKSIDKI+A EFIAG SK SK
Sbjct: 336 DDVTAMASSLKRKAKEFRKQKSIDKINAEEFIAGPSKPSK 375
>gb|EOY32827.1| RNA-binding KH domain-containing protein [Theobroma cacao]
Length = 445
Score = 122 bits (306), Expect = 1e-25
Identities = 59/93 (63%), Positives = 74/93 (79%)
Frame = -1
Query: 696 QQLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDK 517
Q+LESGEYFLS+KKK AK+W+EKQ KQA+K AENK+KREE+FVPP+EP + + S DK
Sbjct: 336 QELESGEYFLSEKKKLAKKWQEKQEKQAQKTAENKRKREESFVPPKEPVKQDSRESENDK 395
Query: 516 DDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIA 418
+DV + SLK+KAKEF KQKS I+A E+IA
Sbjct: 396 EDVAVLTMSLKQKAKEFGKQKSFQNINAEEYIA 428
>gb|EXC41712.1| hypothetical protein L484_000599 [Morus notabilis]
Length = 367
Score = 122 bits (305), Expect = 1e-25
Identities = 61/92 (66%), Positives = 75/92 (81%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKD 514
QLE+GEYFLSDK KSAK+W+EKQ KQAEK AENK+KRE AFVPPEEP + +++V N D +
Sbjct: 261 QLETGEYFLSDKTKSAKKWQEKQEKQAEKTAENKRKREAAFVPPEEPVKQDRNVKN-DAE 319
Query: 513 DVTAMASSLKKKAKEFRKQKSIDKIDAVEFIA 418
DV AMA SLKKKAKEF KQK + ++A ++A
Sbjct: 320 DVAAMAKSLKKKAKEFGKQKMDETVNAEAYLA 351
>emb|CBI22501.3| unnamed protein product [Vitis vinifera]
Length = 424
Score = 118 bits (296), Expect = 2e-24
Identities = 60/96 (62%), Positives = 73/96 (76%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKD 514
QLESGEYFLSD+KK AK+W++K KQAEK AENK+KRE AFVPP EP + S DK+
Sbjct: 314 QLESGEYFLSDQKKFAKKWQQKLEKQAEKTAENKRKREAAFVPPMEPMVQDPSKSADDKN 373
Query: 513 DVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
DV AMA SLKKKAKEF KQKS++ ++ +IA S +
Sbjct: 374 DVAAMAMSLKKKAKEFGKQKSLENVNPETYIAASGE 409
>ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Vitis
vinifera]
Length = 386
Score = 118 bits (296), Expect = 2e-24
Identities = 60/96 (62%), Positives = 73/96 (76%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKD 514
QLESGEYFLSD+KK AK+W++K KQAEK AENK+KRE AFVPP EP + S DK+
Sbjct: 276 QLESGEYFLSDQKKFAKKWQQKLEKQAEKTAENKRKREAAFVPPMEPMVQDPSKSADDKN 335
Query: 513 DVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
DV AMA SLKKKAKEF KQKS++ ++ +IA S +
Sbjct: 336 DVAAMAMSLKKKAKEFGKQKSLENVNPETYIAASGE 371
>ref|XP_006478051.1| PREDICTED: KRR1 small subunit processome component homolog [Citrus
sinensis]
Length = 376
Score = 117 bits (293), Expect = 3e-24
Identities = 56/95 (58%), Positives = 72/95 (75%)
Frame = -1
Query: 690 LESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKDD 511
LESGEYFLS++KK +K+W+EKQ KQAEK AENK+KR+ AF+PPEEP R N + +D
Sbjct: 273 LESGEYFLSERKKESKKWQEKQEKQAEKTAENKRKRDAAFIPPEEPSRQNSSEAEDKTND 332
Query: 510 VTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
V AMA SLK+KAK+ RKQK + I+ E+IA S +
Sbjct: 333 VAAMAKSLKEKAKKLRKQKFAENINPEEYIAASGE 367
>ref|XP_006441061.1| hypothetical protein CICLE_v10020638mg [Citrus clementina]
gi|557543323|gb|ESR54301.1| hypothetical protein
CICLE_v10020638mg [Citrus clementina]
Length = 376
Score = 116 bits (290), Expect = 8e-24
Identities = 56/95 (58%), Positives = 72/95 (75%)
Frame = -1
Query: 690 LESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKDD 511
LESGEYFLS++KK +K+W+EKQ KQAEK AENK+KR+ AF+PPEEP R N + +D
Sbjct: 273 LESGEYFLSERKKESKKWQEKQEKQAEKTAENKRKRDAAFIPPEEPSRQNSCEAEDKTND 332
Query: 510 VTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
V AMA SLK+KAK+ RKQK + I+ E+IA S +
Sbjct: 333 VAAMAKSLKEKAKKLRKQKFAENINPEEYIAASGE 367
>ref|XP_004491162.1| PREDICTED: KRR1 small subunit processome component homolog [Cicer
arietinum]
Length = 382
Score = 112 bits (280), Expect = 1e-22
Identities = 57/98 (58%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMD-- 520
QLE+GEYF+++KKKSAK+W+E+Q KQAEK AENK+KREEAF+PP+E H + V N +
Sbjct: 276 QLETGEYFMTEKKKSAKKWQERQEKQAEKTAENKRKREEAFIPPKE---HAKPVDNSEDA 332
Query: 519 KDDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
++V+ MA SLKKKAK+F K+KS + I+A +I GSS+
Sbjct: 333 NNNVSEMAKSLKKKAKKFEKRKSEENINAETYIMGSSE 370
>ref|XP_004491161.1| PREDICTED: KRR1 small subunit processome component homolog [Cicer
arietinum]
Length = 382
Score = 112 bits (280), Expect = 1e-22
Identities = 58/98 (59%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMD-- 520
QLE+GEYF+++KKKSAK+W+E+Q KQAEK AENK+KREEAF+PP+E H + V N D
Sbjct: 276 QLETGEYFMTEKKKSAKKWQERQEKQAEKTAENKRKREEAFIPPKE---HAKPVDNSDDA 332
Query: 519 KDDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
++V+ MA SLKKKAK+F K+KS + I+A +I GSS+
Sbjct: 333 TNNVSEMAMSLKKKAKKFGKRKSEENINAETYIMGSSE 370
>gb|AFK40254.1| unknown [Medicago truncatula]
Length = 380
Score = 112 bits (280), Expect = 1e-22
Identities = 58/98 (59%), Positives = 78/98 (79%), Gaps = 3/98 (3%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKR---HNQDVSNM 523
QLE+GEYFLSDKKKSAK+W+E+QV+QAEK AENK+KR+E+FVPP+EP +++D SN
Sbjct: 274 QLETGEYFLSDKKKSAKKWQERQVQQAEKTAENKRKRDESFVPPKEPANLVGNSEDASN- 332
Query: 522 DKDDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSS 409
+V MA SLK+KA++F K+KS + I+A +I GSS
Sbjct: 333 ---NVAEMAMSLKEKARKFGKRKSEENINAETYIMGSS 367
>ref|XP_003617063.1| KRR1 small subunit processome component-like protein [Medicago
truncatula] gi|355518398|gb|AET00022.1| KRR1 small
subunit processome component-like protein [Medicago
truncatula]
Length = 424
Score = 112 bits (280), Expect = 1e-22
Identities = 58/98 (59%), Positives = 78/98 (79%), Gaps = 3/98 (3%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKR---HNQDVSNM 523
QLE+GEYFLSDKKKSAK+W+E+QV+QAEK AENK+KR+E+FVPP+EP +++D SN
Sbjct: 318 QLETGEYFLSDKKKSAKKWQERQVQQAEKTAENKRKRDESFVPPKEPANLVGNSEDASN- 376
Query: 522 DKDDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSS 409
+V MA SLK+KA++F K+KS + I+A +I GSS
Sbjct: 377 ---NVAEMAMSLKEKARKFGKRKSEENINAETYIMGSS 411
>ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycine max]
gi|255639399|gb|ACU19995.1| unknown [Glycine max]
Length = 389
Score = 112 bits (279), Expect = 1e-22
Identities = 59/96 (61%), Positives = 74/96 (77%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKD 514
QLE+GEYFLS+K+KSAK W+EKQ KQAEK AENK+KREEAF+PP+EP + D S +
Sbjct: 283 QLETGEYFLSNKRKSAKIWQEKQEKQAEKTAENKRKREEAFIPPKEP-ANLVDKSEDANN 341
Query: 513 DVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
+V MA SLKKK K+F K+KS + IDA +I GSS+
Sbjct: 342 NVADMAISLKKKTKKFGKRKSEENIDAETYIVGSSE 377
>ref|NP_196459.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|13878039|gb|AAK44097.1|AF370282_1 putative rev
interacting protein mis3 [Arabidopsis thaliana]
gi|10178284|emb|CAC08342.1| rev interacting protein
mis3-like [Arabidopsis thaliana]
gi|23296614|gb|AAN13132.1| putative rev interacting
protein mis3 [Arabidopsis thaliana]
gi|332003916|gb|AED91299.1| RNA-binding KH
domain-containing protein [Arabidopsis thaliana]
Length = 391
Score = 111 bits (278), Expect = 2e-22
Identities = 53/101 (52%), Positives = 77/101 (76%), Gaps = 3/101 (2%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMD-- 520
QLESGEYF+SDKKKS K+W+EKQ KQ+EK ENK+KR+ +F+PPEEP +N + + +
Sbjct: 279 QLESGEYFMSDKKKSEKKWQEKQEKQSEKSTENKRKRDASFLPPEEPMNNNSNANKSEDG 338
Query: 519 KDDVTAMASSLKKKAKEFRKQKSI-DKIDAVEFIAGSSKTS 400
K+D+T + +SLK K KE +KQK ++++A E+IAG S ++
Sbjct: 339 KNDITELTNSLKSKTKELKKQKKTHERVNAEEYIAGPSSSA 379
>ref|XP_002871325.1| hypothetical protein ARALYDRAFT_487679 [Arabidopsis lyrata subsp.
lyrata] gi|297317162|gb|EFH47584.1| hypothetical protein
ARALYDRAFT_487679 [Arabidopsis lyrata subsp. lyrata]
Length = 391
Score = 111 bits (277), Expect = 3e-22
Identities = 55/102 (53%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMD-- 520
QLESGEYF+SDKKKS K+W EKQ KQ EK ENK+KR+ +F+PPEEP +N +N +
Sbjct: 279 QLESGEYFMSDKKKSEKKWLEKQEKQTEKSTENKRKRDASFLPPEEPMNNNSKANNSEDG 338
Query: 519 KDDVTAMASSLKKKAKEFRKQKSI-DKIDAVEFIAGSSKTSK 397
K+D+T + SLK K KE +KQK ++++A E+IAG S K
Sbjct: 339 KNDITELTQSLKSKTKELKKQKKTHERVNAEEYIAGPSSIDK 380
>ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putative [Ricinus communis]
gi|223547313|gb|EEF48808.1| Ribosomal RNA assembly
protein mis3, putative [Ricinus communis]
Length = 377
Score = 111 bits (277), Expect = 3e-22
Identities = 53/100 (53%), Positives = 76/100 (76%)
Frame = -1
Query: 696 QQLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDK 517
++LESGEYFL+++KK AK+W+EKQ +QAEK AENK+KR+ AFVPPEE + + S
Sbjct: 269 RELESGEYFLNNQKKQAKKWQEKQERQAEKTAENKRKRDTAFVPPEEHRDQDAGKSEDKN 328
Query: 516 DDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSKTSK 397
+DV A+A S+KKKAK+F K+ +++ I+A E+IA S + K
Sbjct: 329 NDVAAIALSIKKKAKDFGKKNAVENINAEEYIAASGELPK 368
>ref|XP_003519473.1| PREDICTED: KRR1 small subunit processome component homolog [Glycine
max]
Length = 389
Score = 109 bits (273), Expect = 7e-22
Identities = 58/96 (60%), Positives = 73/96 (76%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKD 514
QLE+GEYFLS+K+KSAK W+EKQ KQAEK AENK+KREEAF+PP+EP + D S
Sbjct: 283 QLETGEYFLSNKRKSAKIWQEKQEKQAEKTAENKRKREEAFIPPKEP-ANLVDKSEDANS 341
Query: 513 DVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
+V MA SLKKK K+F K+KS + I+A +I GSS+
Sbjct: 342 NVADMAMSLKKKTKKFGKRKSEENINAETYIIGSSE 377
>gb|AAM64563.1| rev interacting protein mis3-like [Arabidopsis thaliana]
Length = 391
Score = 109 bits (273), Expect = 7e-22
Identities = 52/101 (51%), Positives = 76/101 (75%), Gaps = 3/101 (2%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMD-- 520
QLESGEYF+ DKKKS K+W+EKQ KQ+EK ENK+KR+ +F+PPEEP +N + + +
Sbjct: 279 QLESGEYFMRDKKKSEKKWQEKQEKQSEKSTENKRKRDASFLPPEEPMNNNSNANKSEDG 338
Query: 519 KDDVTAMASSLKKKAKEFRKQKSI-DKIDAVEFIAGSSKTS 400
K+D+T + +SLK K KE +KQK ++++A E+IAG S ++
Sbjct: 339 KNDITELTNSLKSKTKELKKQKKTHERVNAEEYIAGPSSSA 379
>ref|XP_002310107.1| hypothetical protein POPTR_0007s08410g [Populus trichocarpa]
gi|222853010|gb|EEE90557.1| hypothetical protein
POPTR_0007s08410g [Populus trichocarpa]
Length = 379
Score = 109 bits (272), Expect = 1e-21
Identities = 57/96 (59%), Positives = 69/96 (71%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKRHNQDVSNMDKD 514
QLE+GEYFLSDKKK AK+W EKQ KQ EK AENK+KR+ AFVPP+E D +
Sbjct: 278 QLETGEYFLSDKKKQAKKWHEKQEKQLEKTAENKRKRDAAFVPPKEDPSTYAD----NNK 333
Query: 513 DVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSSK 406
DV AMA SLKKKAKEF KQKS + ++ ++IA S +
Sbjct: 334 DVAAMAMSLKKKAKEFGKQKSFENVNPEDYIATSGE 369
>ref|XP_004159171.1| PREDICTED: KRR1 small subunit processome component homolog [Cucumis
sativus]
Length = 379
Score = 107 bits (266), Expect = 5e-21
Identities = 55/96 (57%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
Frame = -1
Query: 693 QLESGEYFLSDKKKSAKQWEEKQVKQAEKVAENKKKREEAFVPPEE-PKRHNQDVSNMDK 517
QLE+GEYFL++KKKSAK+W++KQ KQAEK A+NK+KRE AFVPP+E PK+ + + DK
Sbjct: 273 QLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAAFVPPKEAPKQDTK--PDGDK 330
Query: 516 DDVTAMASSLKKKAKEFRKQKSIDKIDAVEFIAGSS 409
+D+ MA SLK+KAK F K+K+ + I+ +IA SS
Sbjct: 331 NDIAEMAKSLKEKAKAFGKRKAAETINPEAYIASSS 366