BLASTX nr result
ID: Atropa21_contig00018020
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00018020
(641 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355794.1| PREDICTED: DNA repair helicase UVH6-like [So... 135 1e-29
ref|XP_004240533.1| PREDICTED: DNA repair helicase UVH6-like [So... 135 1e-29
emb|CBI32371.3| unnamed protein product [Vitis vinifera] 105 1e-20
ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis v... 105 1e-20
ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h... 103 3e-20
ref|XP_006444090.1| hypothetical protein CICLE_v10018975mg [Citr... 103 4e-20
ref|XP_002300852.1| ULTRAVIOLET HYPERSENSITIVE 6 family protein ... 103 4e-20
ref|XP_006418256.1| hypothetical protein EUTSA_v10006888mg [Eutr... 102 9e-20
ref|XP_006306808.1| hypothetical protein CARUB_v10008351mg [Caps... 102 9e-20
gb|AAF14582.1|AF188623_1 nucleotide excision repair protein XP-D... 102 9e-20
ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]... 102 9e-20
dbj|BAJ34374.1| unnamed protein product [Thellungiella halophila] 102 9e-20
ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arab... 102 9e-20
gb|EMJ00198.1| hypothetical protein PRUPE_ppa001835mg [Prunus pe... 102 1e-19
ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ric... 102 1e-19
gb|EXB39363.1| DNA repair helicase UVH6 [Morus notabilis] 101 2e-19
ref|XP_004290662.1| PREDICTED: DNA repair helicase UVH6-like [Fr... 101 2e-19
gb|ESW24023.1| hypothetical protein PHAVU_004G095600g [Phaseolus... 100 4e-19
ref|XP_004516632.1| PREDICTED: DNA repair helicase UVH6-like iso... 100 4e-19
ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Gl... 100 6e-19
>ref|XP_006355794.1| PREDICTED: DNA repair helicase UVH6-like [Solanum tuberosum]
Length = 758
Score = 135 bits (340), Expect = 1e-29
Identities = 64/67 (95%), Positives = 67/67 (100%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENMVTG 462
KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGK+TLLSQ+DLENM+TG
Sbjct: 692 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKKTLLSQEDLENMITG 751
Query: 461 PDGEMLL 441
PDGEMLL
Sbjct: 752 PDGEMLL 758
>ref|XP_004240533.1| PREDICTED: DNA repair helicase UVH6-like [Solanum lycopersicum]
Length = 758
Score = 135 bits (340), Expect = 1e-29
Identities = 64/67 (95%), Positives = 67/67 (100%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENMVTG 462
KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGK+TLLSQ+DLENM+TG
Sbjct: 692 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKKTLLSQEDLENMITG 751
Query: 461 PDGEMLL 441
PDGEMLL
Sbjct: 752 PDGEMLL 758
>emb|CBI32371.3| unnamed protein product [Vitis vinifera]
Length = 922
Score = 105 bits (262), Expect = 1e-20
Identities = 50/66 (75%), Positives = 57/66 (86%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENMVTG 462
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G G++TLLS++DLE M G
Sbjct: 856 KLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVSGRKTLLSEEDLEKMGDG 915
Query: 461 PDGEML 444
EML
Sbjct: 916 TTNEML 921
>ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis vinifera]
Length = 758
Score = 105 bits (262), Expect = 1e-20
Identities = 50/66 (75%), Positives = 57/66 (86%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENMVTG 462
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G G++TLLS++DLE M G
Sbjct: 692 KLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVSGRKTLLSEEDLEKMGDG 751
Query: 461 PDGEML 444
EML
Sbjct: 752 TTNEML 757
>ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
[Cucumis sativus]
Length = 919
Score = 103 bits (258), Expect = 3e-20
Identities = 50/66 (75%), Positives = 57/66 (86%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENMVTG 462
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G+ G++TLLSQ+DLE M
Sbjct: 853 KLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSSGRKTLLSQEDLEKMSEA 912
Query: 461 PDGEML 444
EML
Sbjct: 913 NMNEML 918
>ref|XP_006444090.1| hypothetical protein CICLE_v10018975mg [Citrus clementina]
gi|568852134|ref|XP_006479735.1| PREDICTED: DNA repair
helicase UVH6-like [Citrus sinensis]
gi|557546352|gb|ESR57330.1| hypothetical protein
CICLE_v10018975mg [Citrus clementina]
Length = 759
Score = 103 bits (257), Expect = 4e-20
Identities = 51/67 (76%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENMVT- 465
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G++G++TLLSQ DLE M
Sbjct: 692 KLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTND 751
Query: 464 GPDGEML 444
G EML
Sbjct: 752 GSINEML 758
>ref|XP_002300852.1| ULTRAVIOLET HYPERSENSITIVE 6 family protein [Populus trichocarpa]
gi|222842578|gb|EEE80125.1| ULTRAVIOLET HYPERSENSITIVE 6
family protein [Populus trichocarpa]
Length = 758
Score = 103 bits (257), Expect = 4e-20
Identities = 48/57 (84%), Positives = 54/57 (94%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENM 471
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G+ GK+TLLSQ+DLE M
Sbjct: 692 KLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGSSGKKTLLSQEDLEKM 748
>ref|XP_006418256.1| hypothetical protein EUTSA_v10006888mg [Eutrema salsugineum]
gi|557096027|gb|ESQ36609.1| hypothetical protein
EUTSA_v10006888mg [Eutrema salsugineum]
Length = 758
Score = 102 bits (254), Expect = 9e-20
Identities = 46/57 (80%), Positives = 54/57 (94%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENM 471
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G +G++TLL+Q+DLE M
Sbjct: 692 KLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQEDLEKM 748
>ref|XP_006306808.1| hypothetical protein CARUB_v10008351mg [Capsella rubella]
gi|482575519|gb|EOA39706.1| hypothetical protein
CARUB_v10008351mg [Capsella rubella]
Length = 786
Score = 102 bits (254), Expect = 9e-20
Identities = 46/57 (80%), Positives = 54/57 (94%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENM 471
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G +G++TLL+Q+DLE M
Sbjct: 720 KLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQEDLEKM 776
>gb|AAF14582.1|AF188623_1 nucleotide excision repair protein XP-D homolog [Arabidopsis
thaliana]
Length = 758
Score = 102 bits (254), Expect = 9e-20
Identities = 46/57 (80%), Positives = 54/57 (94%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENM 471
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G +G++TLL+Q+DLE M
Sbjct: 692 KLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQEDLEKM 748
>ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
gi|30678494|ref|NP_849584.1| DNA repair helicase UVH6
[Arabidopsis thaliana]
gi|57013122|sp|Q8W4M7.1|ERCC2_ARATH RecName: Full=DNA
repair helicase UVH6; AltName: Full=ERCC2 homolog;
AltName: Full=RAD3 homolog; Short=AtUVH6; Short=AtXPD;
AltName: Full=UV hypersensitive protein 6; AltName:
Full=XPD homolog gi|17064790|gb|AAL32549.1| Strong
similarity to nucleotide excision repair protein
[Arabidopsis thaliana] gi|20258776|gb|AAM13910.1|
putative DNA repair protein [Arabidopsis thaliana]
gi|22651570|gb|AAM10793.1| DNA repair/transcription
factor protein [Arabidopsis thaliana]
gi|34098809|gb|AAQ56787.1| At1g03190 [Arabidopsis
thaliana] gi|332189421|gb|AEE27542.1| DNA repair
helicase UVH6 [Arabidopsis thaliana]
gi|332189422|gb|AEE27543.1| DNA repair helicase UVH6
[Arabidopsis thaliana]
Length = 758
Score = 102 bits (254), Expect = 9e-20
Identities = 46/57 (80%), Positives = 54/57 (94%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENM 471
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G +G++TLL+Q+DLE M
Sbjct: 692 KLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQEDLEKM 748
>dbj|BAJ34374.1| unnamed protein product [Thellungiella halophila]
Length = 376
Score = 102 bits (254), Expect = 9e-20
Identities = 46/57 (80%), Positives = 54/57 (94%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENM 471
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G +G++TLL+Q+DLE M
Sbjct: 310 KLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQEDLEKM 366
>ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arabidopsis lyrata subsp.
lyrata] gi|297335286|gb|EFH65703.1| hypothetical protein
ARALYDRAFT_470299 [Arabidopsis lyrata subsp. lyrata]
Length = 758
Score = 102 bits (254), Expect = 9e-20
Identities = 46/57 (80%), Positives = 54/57 (94%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENM 471
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G +G++TLL+Q+DLE M
Sbjct: 692 KLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQEDLEKM 748
>gb|EMJ00198.1| hypothetical protein PRUPE_ppa001835mg [Prunus persica]
Length = 759
Score = 102 bits (253), Expect = 1e-19
Identities = 51/67 (76%), Positives = 59/67 (88%), Gaps = 1/67 (1%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGAL-GKRTLLSQQDLENMVT 465
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G++ G++TLLSQ+DLENM
Sbjct: 692 KLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSVSGRKTLLSQEDLENMGE 751
Query: 464 GPDGEML 444
EML
Sbjct: 752 SIADEML 758
>ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
gi|223540142|gb|EEF41719.1| DNA repair helicase
rad3/xp-d, putative [Ricinus communis]
Length = 758
Score = 102 bits (253), Expect = 1e-19
Identities = 49/66 (74%), Positives = 57/66 (86%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENMVTG 462
KLPGWILSHLRDA+LNLSTDMA++IA+EFLRKMAQPYDK GA G++TLLSQ+DLE M
Sbjct: 692 KLPGWILSHLRDANLNLSTDMALHIAREFLRKMAQPYDKTGASGRKTLLSQEDLEKMAES 751
Query: 461 PDGEML 444
+ML
Sbjct: 752 GMQDML 757
>gb|EXB39363.1| DNA repair helicase UVH6 [Morus notabilis]
Length = 758
Score = 101 bits (252), Expect = 2e-19
Identities = 50/66 (75%), Positives = 56/66 (84%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENMVTG 462
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G G++TLLSQ+DLE M
Sbjct: 692 KLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGGSGRKTLLSQEDLEKMGER 751
Query: 461 PDGEML 444
EML
Sbjct: 752 IVDEML 757
>ref|XP_004290662.1| PREDICTED: DNA repair helicase UVH6-like [Fragaria vesca subsp.
vesca]
Length = 759
Score = 101 bits (251), Expect = 2e-19
Identities = 51/67 (76%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNG-ALGKRTLLSQQDLENMVT 465
KLPGWILSHLRDAHLNLSTDMA++IA+EFLRKMAQPYDK G + G++TLLSQ DLE M
Sbjct: 692 KLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGSSSGRKTLLSQDDLERMGQ 751
Query: 464 GPDGEML 444
G EML
Sbjct: 752 GITDEML 758
>gb|ESW24023.1| hypothetical protein PHAVU_004G095600g [Phaseolus vulgaris]
Length = 758
Score = 100 bits (249), Expect = 4e-19
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENMVTG 462
KLP WILSHL DAHLNLSTDMA++IA+EFLRKMAQPYDK G GK+TLLSQ+DL+ MV
Sbjct: 692 KLPSWILSHLHDAHLNLSTDMALHIAREFLRKMAQPYDKTGGTGKKTLLSQEDLQKMVIS 751
Query: 461 PDGEML 444
+M+
Sbjct: 752 GMDDMM 757
>ref|XP_004516632.1| PREDICTED: DNA repair helicase UVH6-like isoform X1 [Cicer
arietinum] gi|502180410|ref|XP_004516633.1| PREDICTED:
DNA repair helicase UVH6-like isoform X2 [Cicer
arietinum] gi|502180414|ref|XP_004516634.1| PREDICTED:
DNA repair helicase UVH6-like isoform X3 [Cicer
arietinum]
Length = 759
Score = 100 bits (249), Expect = 4e-19
Identities = 49/65 (75%), Positives = 57/65 (87%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENMVTG 462
KLPGWILSHLRDA+LNLSTDMA++IA+EFLRKMAQPYDK G G++TLLSQ+DLE +V
Sbjct: 692 KLPGWILSHLRDANLNLSTDMALHIAREFLRKMAQPYDKTGGTGRKTLLSQEDLEKIVF- 750
Query: 461 PDGEM 447
DG M
Sbjct: 751 -DGSM 754
>ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
Length = 758
Score = 99.8 bits (247), Expect = 6e-19
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = -1
Query: 641 KLPGWILSHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKRTLLSQQDLENM-VT 465
KLP WILSHL DAHLNLSTDMA++IA+EFLRKMAQPYDK G G++TLLSQ+DLE M V+
Sbjct: 692 KLPSWILSHLHDAHLNLSTDMALHIAREFLRKMAQPYDKTGGTGRKTLLSQEDLEKMAVS 751
Query: 464 GPDGEM 447
G D M
Sbjct: 752 GLDDMM 757