BLASTX nr result
ID: Atropa21_contig00018015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00018015
(639 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004244605.1| PREDICTED: uncharacterized protein LOC101250... 251 1e-64
ref|XP_006352282.1| PREDICTED: uncharacterized protein LOC102596... 251 2e-64
emb|CBI34709.3| unnamed protein product [Vitis vinifera] 70 4e-10
ref|XP_002276931.1| PREDICTED: uncharacterized protein LOC100265... 70 4e-10
emb|CAN68047.1| hypothetical protein VITISV_017724 [Vitis vinifera] 70 4e-10
ref|XP_006417194.1| hypothetical protein EUTSA_v10006889mg [Eutr... 62 1e-07
ref|XP_006417193.1| hypothetical protein EUTSA_v10006889mg [Eutr... 62 1e-07
ref|XP_006306831.1| hypothetical protein CARUB_v10008376mg [Caps... 62 1e-07
ref|XP_002889946.1| predicted protein [Arabidopsis lyrata subsp.... 62 1e-07
ref|XP_004143986.1| PREDICTED: uncharacterized protein LOC101217... 62 2e-07
ref|XP_002509767.1| conserved hypothetical protein [Ricinus comm... 62 2e-07
ref|XP_006385758.1| hypothetical protein POPTR_0003s12430g [Popu... 61 3e-07
ref|XP_002304482.2| S1 RNA-binding domain-containing family prot... 61 3e-07
gb|AAF78485.1|AC012187_5 Contains similarity to S1 protein from ... 60 4e-07
ref|NP_172740.1| Nucleic acid-binding, OB-fold-like protein [Ara... 60 4e-07
ref|XP_002892714.1| S1 RNA-binding domain-containing protein [Ar... 60 4e-07
gb|EXB37387.1| 30S ribosomal protein S1 [Morus notabilis] 59 9e-07
gb|EOY24678.1| Nucleic acid-binding, putative isoform 3 [Theobro... 59 1e-06
gb|EOY24677.1| Nucleic acid-binding, putative isoform 2 [Theobro... 59 1e-06
gb|EOY24676.1| Nucleic acid-binding, OB-fold-like protein, putat... 59 1e-06
>ref|XP_004244605.1| PREDICTED: uncharacterized protein LOC101250822 [Solanum
lycopersicum]
Length = 883
Score = 251 bits (641), Expect = 1e-64
Identities = 136/173 (78%), Positives = 144/173 (83%)
Frame = +1
Query: 121 MNNLSLDKTLTPNPFLSVSSLHHSRTSKSLCFPKKSNKVLVFSDKYDNSSSITNGFLPRT 300
MNNLSLDKT TPNP LS+SSLHHSR SKSLC P+K VLVF+DK DNS+SIT+GFL +T
Sbjct: 1 MNNLSLDKTSTPNPLLSISSLHHSRISKSLCLPRK---VLVFADKNDNSASITSGFLSKT 57
Query: 301 HFSSKKSKIFVVFADKDDNSSIITSGVLSKTHFYSKKSKNVDVFADKDDNSSVIASGVLS 480
HFS KK VFADKDDNSS + SGVLS+THF SKK V VFA KDDN S I SGVLS
Sbjct: 58 HFSYKK---VTVFADKDDNSSPVASGVLSRTHFSSKK---VAVFASKDDNFSSITSGVLS 111
Query: 481 RTVFSSRKTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 639
RTVFSSRKTKK VFASKDDR SNKLDQWDQMELKFGRLIGEDPKLTLAKIIS
Sbjct: 112 RTVFSSRKTKKFVVFASKDDRNSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 164
>ref|XP_006352282.1| PREDICTED: uncharacterized protein LOC102596782 [Solanum tuberosum]
Length = 912
Score = 251 bits (640), Expect = 2e-64
Identities = 136/173 (78%), Positives = 145/173 (83%)
Frame = +1
Query: 121 MNNLSLDKTLTPNPFLSVSSLHHSRTSKSLCFPKKSNKVLVFSDKYDNSSSITNGFLPRT 300
MNNL LDKT TPNPFLS+SSLHHSR SKSLC P+K VLVF+DK DNS+SIT+GFL +T
Sbjct: 1 MNNLRLDKTSTPNPFLSISSLHHSRISKSLCLPRK---VLVFADKNDNSTSITSGFLSKT 57
Query: 301 HFSSKKSKIFVVFADKDDNSSIITSGVLSKTHFYSKKSKNVDVFADKDDNSSVIASGVLS 480
HFSSKK +VFADKDDNSS I SGVLS+T+FY KK V VFA KDDN S I S VLS
Sbjct: 58 HFSSKK---VIVFADKDDNSSSIASGVLSRTNFYPKK---VAVFASKDDNLSSITSEVLS 111
Query: 481 RTVFSSRKTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 639
RTVF SRKTKK AVFASKDDR SNKLDQWDQMELKFGRLIGEDPKLTLAKIIS
Sbjct: 112 RTVFFSRKTKKFAVFASKDDRNSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 164
>emb|CBI34709.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 70.5 bits (171), Expect = 4e-10
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = +1
Query: 478 SRTVFSSRKTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKII 636
SR +F SR K + VFASKDD KLD+WDQMELKFGRL+GEDPKLTLAKI+
Sbjct: 22 SRRIFFSRNPK-LRVFASKDDP---KLDKWDQMELKFGRLLGEDPKLTLAKIM 70
>ref|XP_002276931.1| PREDICTED: uncharacterized protein LOC100265091 [Vitis vinifera]
Length = 773
Score = 70.5 bits (171), Expect = 4e-10
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = +1
Query: 478 SRTVFSSRKTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKII 636
SR +F SR K + VFASKDD KLD+WDQMELKFGRL+GEDPKLTLAKI+
Sbjct: 22 SRRIFFSRNPK-LRVFASKDDP---KLDKWDQMELKFGRLLGEDPKLTLAKIM 70
>emb|CAN68047.1| hypothetical protein VITISV_017724 [Vitis vinifera]
Length = 768
Score = 70.5 bits (171), Expect = 4e-10
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = +1
Query: 478 SRTVFSSRKTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKII 636
SR +F SR K + VFASKDD KLD+WDQMELKFGRL+GEDPKLTLAKI+
Sbjct: 22 SRRIFFSRNPK-LRVFASKDDP---KLDKWDQMELKFGRLLGEDPKLTLAKIM 70
>ref|XP_006417194.1| hypothetical protein EUTSA_v10006889mg [Eutrema salsugineum]
gi|557094965|gb|ESQ35547.1| hypothetical protein
EUTSA_v10006889mg [Eutrema salsugineum]
Length = 755
Score = 62.4 bits (150), Expect = 1e-07
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +1
Query: 502 KTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 639
K KK V ASK R KL++WDQMELKFGRL+GEDPKLTLAKI++
Sbjct: 45 KQKKFLVSASK--REEPKLNEWDQMELKFGRLLGEDPKLTLAKIVA 88
>ref|XP_006417193.1| hypothetical protein EUTSA_v10006889mg [Eutrema salsugineum]
gi|557094964|gb|ESQ35546.1| hypothetical protein
EUTSA_v10006889mg [Eutrema salsugineum]
Length = 746
Score = 62.4 bits (150), Expect = 1e-07
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +1
Query: 502 KTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 639
K KK V ASK R KL++WDQMELKFGRL+GEDPKLTLAKI++
Sbjct: 45 KQKKFLVSASK--REEPKLNEWDQMELKFGRLLGEDPKLTLAKIVA 88
>ref|XP_006306831.1| hypothetical protein CARUB_v10008376mg [Capsella rubella]
gi|482575542|gb|EOA39729.1| hypothetical protein
CARUB_v10008376mg [Capsella rubella]
Length = 766
Score = 62.4 bits (150), Expect = 1e-07
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +1
Query: 502 KTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 639
K KK V ASK R KL++WDQMELKFGRL+GEDPKLTLAKI++
Sbjct: 42 KQKKFLVSASK--REEPKLNEWDQMELKFGRLLGEDPKLTLAKIVA 85
>ref|XP_002889946.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335788|gb|EFH66205.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 660
Score = 62.4 bits (150), Expect = 1e-07
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +1
Query: 502 KTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKII 636
K KK V ASK R KL++WDQMELKFGRL+GEDPKLTLAKI+
Sbjct: 45 KQKKFVVSASK--REEPKLNEWDQMELKFGRLLGEDPKLTLAKIV 87
>ref|XP_004143986.1| PREDICTED: uncharacterized protein LOC101217667 [Cucumis sativus]
gi|449495887|ref|XP_004159975.1| PREDICTED:
uncharacterized protein LOC101229904 [Cucumis sativus]
Length = 766
Score = 61.6 bits (148), Expect = 2e-07
Identities = 31/53 (58%), Positives = 41/53 (77%)
Frame = +1
Query: 481 RTVFSSRKTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 639
R + + + K +V +SK++ +LD+WDQMELKFGRLIGEDPKLTLAKI+S
Sbjct: 26 RNLCFNGRPSKFSVLSSKEEA---ELDRWDQMELKFGRLIGEDPKLTLAKIMS 75
>ref|XP_002509767.1| conserved hypothetical protein [Ricinus communis]
gi|223549666|gb|EEF51154.1| conserved hypothetical
protein [Ricinus communis]
Length = 748
Score = 61.6 bits (148), Expect = 2e-07
Identities = 33/53 (62%), Positives = 43/53 (81%)
Frame = +1
Query: 481 RTVFSSRKTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 639
R ++ RK K V V+A+K+D KLDQ+DQMELKFGR++GEDPKLTLAKI++
Sbjct: 39 RELWFPRKNKLV-VYAAKEDEP--KLDQYDQMELKFGRMLGEDPKLTLAKIMA 88
>ref|XP_006385758.1| hypothetical protein POPTR_0003s12430g [Populus trichocarpa]
gi|550343039|gb|ERP63555.1| hypothetical protein
POPTR_0003s12430g [Populus trichocarpa]
Length = 799
Score = 60.8 bits (146), Expect = 3e-07
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +1
Query: 520 VFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 639
V A+K++ G KLDQWDQMELKFG L+GEDPKLTLAKI++
Sbjct: 49 VLAAKEE-GQPKLDQWDQMELKFGHLLGEDPKLTLAKIMA 87
>ref|XP_002304482.2| S1 RNA-binding domain-containing family protein [Populus
trichocarpa] gi|550343038|gb|EEE79461.2| S1 RNA-binding
domain-containing family protein [Populus trichocarpa]
Length = 816
Score = 60.8 bits (146), Expect = 3e-07
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +1
Query: 520 VFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 639
V A+K++ G KLDQWDQMELKFG L+GEDPKLTLAKI++
Sbjct: 49 VLAAKEE-GQPKLDQWDQMELKFGHLLGEDPKLTLAKIMA 87
>gb|AAF78485.1|AC012187_5 Contains similarity to S1 protein from Homo sapiens gb|U27517 and
contains a S1 RNA binding PF|00575 domain. EST
gb|F15427, gb|F15428 comes from this gene [Arabidopsis
thaliana]
Length = 775
Score = 60.5 bits (145), Expect = 4e-07
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +1
Query: 502 KTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 639
K KK V ASK R KL++WDQMEL FGRL+GEDPKLTLAKI++
Sbjct: 42 KQKKFLVSASK--REEPKLNEWDQMELNFGRLLGEDPKLTLAKIVA 85
>ref|NP_172740.1| Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
gi|15028377|gb|AAK76665.1| putative heat shock factor
protein hsf8 [Arabidopsis thaliana]
gi|25055005|gb|AAN71967.1| putative heat shock factor
protein hsf8 [Arabidopsis thaliana]
gi|225897916|dbj|BAH30290.1| hypothetical protein
[Arabidopsis thaliana] gi|332190809|gb|AEE28930.1|
Nucleic acid-binding, OB-fold-like protein [Arabidopsis
thaliana]
Length = 767
Score = 60.5 bits (145), Expect = 4e-07
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +1
Query: 502 KTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 639
K KK V ASK R KL++WDQMEL FGRL+GEDPKLTLAKI++
Sbjct: 42 KQKKFLVSASK--REEPKLNEWDQMELNFGRLLGEDPKLTLAKIVA 85
>ref|XP_002892714.1| S1 RNA-binding domain-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297338556|gb|EFH68973.1| S1 RNA-binding
domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 768
Score = 60.5 bits (145), Expect = 4e-07
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +1
Query: 502 KTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKIIS 639
K KK V ASK R KL++WDQMEL FGRL+GEDPKLTLAKI++
Sbjct: 38 KQKKFLVSASK--REEPKLNEWDQMELNFGRLLGEDPKLTLAKIVA 81
>gb|EXB37387.1| 30S ribosomal protein S1 [Morus notabilis]
Length = 1032
Score = 59.3 bits (142), Expect = 9e-07
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +1
Query: 499 RKTKKVAVFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKII 636
R +K+ AVFASK++ KLD DQMEL+FGRL+GEDPKLTLAKI+
Sbjct: 46 RGSKRFAVFASKEEP---KLDPLDQMELQFGRLLGEDPKLTLAKIM 88
>gb|EOY24678.1| Nucleic acid-binding, putative isoform 3 [Theobroma cacao]
Length = 592
Score = 58.9 bits (141), Expect = 1e-06
Identities = 30/48 (62%), Positives = 39/48 (81%), Gaps = 2/48 (4%)
Frame = +1
Query: 499 RKTKKVA--VFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKII 636
R K+V+ +FA+K++ K D+WDQMELKFGRL+GEDPKLTLAKI+
Sbjct: 37 RGAKRVSFRIFAAKEEP---KFDKWDQMELKFGRLLGEDPKLTLAKIM 81
>gb|EOY24677.1| Nucleic acid-binding, putative isoform 2 [Theobroma cacao]
Length = 588
Score = 58.9 bits (141), Expect = 1e-06
Identities = 30/48 (62%), Positives = 39/48 (81%), Gaps = 2/48 (4%)
Frame = +1
Query: 499 RKTKKVA--VFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKII 636
R K+V+ +FA+K++ K D+WDQMELKFGRL+GEDPKLTLAKI+
Sbjct: 37 RGAKRVSFRIFAAKEEP---KFDKWDQMELKFGRLLGEDPKLTLAKIM 81
>gb|EOY24676.1| Nucleic acid-binding, OB-fold-like protein, putative isoform 1
[Theobroma cacao]
Length = 747
Score = 58.9 bits (141), Expect = 1e-06
Identities = 30/48 (62%), Positives = 39/48 (81%), Gaps = 2/48 (4%)
Frame = +1
Query: 499 RKTKKVA--VFASKDDRGSNKLDQWDQMELKFGRLIGEDPKLTLAKII 636
R K+V+ +FA+K++ K D+WDQMELKFGRL+GEDPKLTLAKI+
Sbjct: 37 RGAKRVSFRIFAAKEEP---KFDKWDQMELKFGRLLGEDPKLTLAKIM 81