BLASTX nr result
ID: Atropa21_contig00017969
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00017969
(875 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 227 5e-57
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme... 196 9e-48
gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus no... 67 7e-09
gb|EXB59778.1| NADP-dependent malic enzyme [Morus notabilis] 67 9e-09
gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial ... 65 3e-08
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme... 64 7e-08
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 64 1e-07
ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polyme... 61 6e-07
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 60 1e-06
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 60 1e-06
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 911
Score = 227 bits (578), Expect = 5e-57
Identities = 119/154 (77%), Positives = 133/154 (86%), Gaps = 4/154 (2%)
Frame = +1
Query: 337 MGDPFEEEIDVPQCILEAPLPCSVDGMLRKICSEQCQEAPDTDIRRRLSSIGEQGSLAML 516
MGDPF+EEIDVP CIL+APLP SV+ ML KIC+EQ Q+ T IRRRLSSIGE+GSL +L
Sbjct: 1 MGDPFDEEIDVPSCILDAPLPYSVETMLEKICNEQGQKPLGTGIRRRLSSIGEKGSLEIL 60
Query: 517 KIISSRPIKKTLSAFLVYLMDRYPDCLSSRSFNSPLKR-TSPVLFPSPESKRVQGESSSK 693
KIISSRPIKK+LSAFLVYL+DRYPDCLSS FNSPLKR +SP+LFPSPE KRVQGES SK
Sbjct: 61 KIISSRPIKKSLSAFLVYLIDRYPDCLSSSPFNSPLKRSSSPLLFPSPEGKRVQGESPSK 120
Query: 694 LKLEIG---SASPRKVIRQLSFREEPESNCRKTS 786
KLE+G ASP+KV RQLSFREEPESNCR+TS
Sbjct: 121 SKLEMGFLACASPQKVARQLSFREEPESNCRRTS 154
>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 1011
Score = 196 bits (498), Expect = 9e-48
Identities = 112/156 (71%), Positives = 125/156 (80%), Gaps = 6/156 (3%)
Frame = +1
Query: 337 MGDPFEEEIDVPQCILEAPLPCSVDGMLRKICSEQCQEAPDTDIRRRLSSIGEQGSLAML 516
MGDP EEIDV L+APLP SV+ ML +IC EQ Q+ P T IRRRLSSIGE+GSL ML
Sbjct: 1 MGDPLIEEIDV----LDAPLPYSVETMLDRICKEQGQKPPCTGIRRRLSSIGEKGSLEML 56
Query: 517 KIISSRPIKKTLSAFLVYLMDRYPDCLSSRS--FNSPLKR-TSPVLFPSPESKRVQGESS 687
KIIS RPIKK+LSAFLVY++DRYPDCLSS S FN LKR +SP LFPSPE KR+QGESS
Sbjct: 57 KIISRRPIKKSLSAFLVYMIDRYPDCLSSSSSPFNCLLKRSSSPRLFPSPEGKRLQGESS 116
Query: 688 SKLKLEIG---SASPRKVIRQLSFREEPESNCRKTS 786
SK KLE+G ASP+KV RQLSF EEPESNCR+TS
Sbjct: 117 SKSKLEMGLLACASPQKVARQLSFCEEPESNCRRTS 152
>gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus notabilis]
Length = 529
Score = 67.4 bits (163), Expect = 7e-09
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Frame = +1
Query: 358 EIDVPQCIL----EAPLPCSVDGMLRKICSEQCQEAPDTDIRRRLSSIGEQGSLAMLKII 525
E+ P C L E PLP SV +L +IC+E+ Q PD ++RR+L+S GE +L +L+ I
Sbjct: 2 EVSNPNCDLAPCIEVPLPRSVLELLERICAERSQPPPDAELRRKLASAGEDEALRVLRTI 61
Query: 526 SSRPIK-KTLSAFLVYLMDRYPDCLSSRSFNSPLKRTSPVLFPSPESKRVQGESSSKLKL 702
+ K K+L F+ YL+ + P P +SP P PE+ R +
Sbjct: 62 ADCKTKIKSLHGFVTYLLRQQP---------PPPSLSSPSRSPVPENSRPSSSPGTFANS 112
Query: 703 EIGSASPRKVIRQLSFREE 759
+ + + + + +L FR++
Sbjct: 113 QGANGAQMEALGELEFRKQ 131
>gb|EXB59778.1| NADP-dependent malic enzyme [Morus notabilis]
Length = 1017
Score = 67.0 bits (162), Expect = 9e-09
Identities = 34/82 (41%), Positives = 56/82 (68%)
Frame = +1
Query: 385 EAPLPCSVDGMLRKICSEQCQEAPDTDIRRRLSSIGEQGSLAMLKIISSRPIKKTLSAFL 564
E PLP SVD ++ KIC++Q Q P+ +R RL+ GE+G+L +L+ I++ IK++LS F+
Sbjct: 7 EVPLPRSVDELIDKICADQSQAHPEAKLRWRLAQRGEEGALEILRTIATTKIKRSLSGFI 66
Query: 565 VYLMDRYPDCLSSRSFNSPLKR 630
++L++R SS ++P KR
Sbjct: 67 IHLLER-----SSSPRSTPPKR 83
>gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus
vulgaris]
Length = 689
Score = 65.5 bits (158), Expect = 3e-08
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 2/158 (1%)
Frame = +1
Query: 394 LPCSVDGMLRKICSEQCQEAPDTDIRRRLSSIGEQGSLAMLKIISSRPIKKTLSAFLVYL 573
LP +V+ ++ IC +Q Q PD IR+ L+++GEQ +L +L+ I+ RPI+ +LSAF+ Y+
Sbjct: 14 LPTAVEALINTICHDQNQLPPDFIIRQGLAAVGEQQALQILRTIAERPIRISLSAFIAYM 73
Query: 574 MDRYPDCLSSRSFNSPLKRTSPVLFPSPESKRVQGESSSKLKLEIGSASPRKVIRQLSF- 750
+ + SS S T L PSP G++SS L +G RK LS+
Sbjct: 74 LKNHRTVTSSTPSTSSTPSTP--LTPSPTR---PGQTSSALH-ALGEMEFRKAFLCLSYI 127
Query: 751 -REEPESNCRKTSGKCVQGESSSKSMLEIGSASPQKVI 861
RE E+ S C+ +S+ ++ A+ +K I
Sbjct: 128 GRESLEN---VASADCI------RSLKDLPMATFEKTI 156
>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 759
Score = 63.9 bits (154), Expect = 7e-08
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Frame = +1
Query: 385 EAPLPCSVDGMLRKICSEQCQEAPDTDIRRRLSSIGEQGSLAMLKIISSRPIKKTLSAFL 564
E LP SV M+ +IC ++ Q +PD +RR L +IGE+ SL +L IS IKKTLS F+
Sbjct: 11 EVELPSSVQQMINQICKKERQNSPDDTVRRLLVAIGEERSLYILNEISKCQIKKTLSGFI 70
Query: 565 VYLMDRYPDCLSSRSFNSPLKRTSPVL-----FPSPESKR 669
V++ +Y ++ F PVL + SP+ +R
Sbjct: 71 VFMAKKYYQS-ETQQFYQKQNHEQPVLSAESFYHSPQIRR 109
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 63.5 bits (153), Expect = 1e-07
Identities = 38/93 (40%), Positives = 54/93 (58%)
Frame = +1
Query: 385 EAPLPCSVDGMLRKICSEQCQEAPDTDIRRRLSSIGEQGSLAMLKIISSRPIKKTLSAFL 564
E LP SV M+ +IC ++ Q +PD +RR L +IGE+ SL +L+ IS IKKTLS F+
Sbjct: 11 EVELPHSVQQMINQICKKERQNSPDDKVRRLLVAIGEERSLCILREISKCQIKKTLSGFI 70
Query: 565 VYLMDRYPDCLSSRSFNSPLKRTSPVLFPSPES 663
V++ +Y ++ F PV PS ES
Sbjct: 71 VFMAKKYYQS-ETQQFYQKQNYEEPV--PSAES 100
>ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cicer
arietinum]
Length = 997
Score = 60.8 bits (146), Expect = 6e-07
Identities = 36/100 (36%), Positives = 60/100 (60%)
Frame = +1
Query: 394 LPCSVDGMLRKICSEQCQEAPDTDIRRRLSSIGEQGSLAMLKIISSRPIKKTLSAFLVYL 573
LP SV+ ++ +I +Q Q D+ IRR L+ +GEQ +L +L IS++PIK++L+AF VY+
Sbjct: 8 LPSSVENLINQIREQQSQPPLDSSIRRNLAELGEQKALQILYYISTQPIKRSLNAFTVYM 67
Query: 574 MDRYPDCLSSRSFNSPLKRTSPVLFPSPESKRVQGESSSK 693
++++ RS SP + PS + Q +S S+
Sbjct: 68 INQH------RSPPSPSR-------PSSSQSQSQSQSQSR 94
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 60.1 bits (144), Expect = 1e-06
Identities = 40/123 (32%), Positives = 68/123 (55%)
Frame = +1
Query: 382 LEAPLPCSVDGMLRKICSEQCQEAPDTDIRRRLSSIGEQGSLAMLKIISSRPIKKTLSAF 561
+E LP SV+ ML++IC+EQ Q P+ RR L+S+GE+ +L +L+ IS I + LSA
Sbjct: 1 MEVSLPHSVEQMLQRICTEQQQPPPEAHTRRNLASLGEESTLELLRKISHLKI-RNLSAL 59
Query: 562 LVYLMDRYPDCLSSRSFNSPLKRTSPVLFPSPESKRVQGESSSKLKLEIGSASPRKVIRQ 741
+ Y++ + + +SP + + PS K+ + ++SS + +G RK
Sbjct: 60 INYMVGKAAQ--GDAASHSPTPK-HLISSPSSTPKKARRQASSPQLVALGELEFRKAFLI 116
Query: 742 LSF 750
LS+
Sbjct: 117 LSY 119
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 60.1 bits (144), Expect = 1e-06
Identities = 40/123 (32%), Positives = 68/123 (55%)
Frame = +1
Query: 382 LEAPLPCSVDGMLRKICSEQCQEAPDTDIRRRLSSIGEQGSLAMLKIISSRPIKKTLSAF 561
+E LP SV+ ML++IC+EQ Q P+ RR L+S+GE+ +L +L+ IS I + LSA
Sbjct: 1 MEVSLPHSVEQMLQRICTEQQQPPPEAHTRRNLASLGEESTLELLRKISHLKI-RNLSAL 59
Query: 562 LVYLMDRYPDCLSSRSFNSPLKRTSPVLFPSPESKRVQGESSSKLKLEIGSASPRKVIRQ 741
+ Y++ + + +SP + + PS K+ + ++SS + +G RK
Sbjct: 60 INYMVGKAAQ--GDAASHSPTPK-HLISSPSSTPKKARRQASSPQLVALGELEFRKAFLI 116
Query: 742 LSF 750
LS+
Sbjct: 117 LSY 119