BLASTX nr result
ID: Atropa21_contig00017946
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00017946
(733 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250974.1| PREDICTED: CRS2-associated factor 2, chlorop... 168 2e-68
ref|XP_006349021.1| PREDICTED: CRS2-associated factor 2, chlorop... 158 5e-68
ref|XP_002315689.2| hypothetical protein POPTR_0010s05230g [Popu... 86 1e-33
ref|XP_002525395.1| conserved hypothetical protein [Ricinus comm... 86 2e-32
gb|EMJ28681.1| hypothetical protein PRUPE_ppa003604mg [Prunus pe... 86 2e-29
gb|EOY00533.1| RNA-binding CRS1 / YhbY (CRM) domain-containing p... 84 5e-28
gb|EXB82569.1| CRS2-associated factor 2 [Morus notabilis] 79 2e-27
ref|XP_004298480.1| PREDICTED: CRS2-associated factor 2, chlorop... 77 1e-26
ref|XP_006416086.1| hypothetical protein EUTSA_v10007246mg [Eutr... 75 2e-26
ref|XP_006483899.1| PREDICTED: CRS2-associated factor 2, chlorop... 74 2e-26
ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citr... 74 2e-26
ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa... 79 3e-25
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo] 76 5e-25
ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa... 79 7e-25
ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chlorop... 70 2e-24
ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arab... 72 9e-24
ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]... 70 3e-23
gb|ESW25745.1| hypothetical protein PHAVU_003G062100g [Phaseolus... 69 1e-22
ref|XP_006307133.1| hypothetical protein CARUB_v10008723mg [Caps... 69 2e-22
ref|XP_002455560.1| hypothetical protein SORBIDRAFT_03g013160 [S... 63 4e-19
>ref|XP_004250974.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Solanum
lycopersicum]
Length = 563
Score = 168 bits (426), Expect(2) = 2e-68
Identities = 88/116 (75%), Positives = 91/116 (78%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSSKHVPEQSRM 323
MSLWKNAIDSGKALLL+DIDLKPDDLLNKVEEF SISQA EHTYPAL+LSSK VPEQS
Sbjct: 448 MSLWKNAIDSGKALLLDDIDLKPDDLLNKVEEFASISQAIEHTYPALVLSSKRVPEQSGS 507
Query: 322 MWRGXXXXXXXXXXXXXXXXXXDKYYINNSFVALESTVPKGLLPVDLIVKEFSDEE 155
MWRG DKYYIN SF ALESTVPKGLLPVDLIVKEFSD+E
Sbjct: 508 MWRGSSDDDNDSDDEISDGDHEDKYYINTSFEALESTVPKGLLPVDLIVKEFSDDE 563
Score = 118 bits (295), Expect(2) = 2e-68
Identities = 57/76 (75%), Positives = 61/76 (80%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLKELVPCVLLSFDDE ILMWRGKDWKPMY N P VSSRI V DE+NTS RSGTAKD
Sbjct: 373 AKLKELVPCVLLSFDDEQILMWRGKDWKPMYGNGPSAVSSRIDAVADEINTSGRSGTAKD 432
Query: 551 CSKADAKTRSSSPRMM 504
S +TR +SP+MM
Sbjct: 433 YSNTHLRTRRTSPKMM 448
>ref|XP_006349021.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Solanum
tuberosum]
Length = 564
Score = 158 bits (400), Expect(2) = 5e-68
Identities = 84/116 (72%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
Frame = -1
Query: 499 SLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSSKHVPEQSRMM 320
SLWKNAIDSGKALLL+DIDLKPDDLLNKVEEF SISQA EHTYPAL+LS+K PEQ +M
Sbjct: 449 SLWKNAIDSGKALLLDDIDLKPDDLLNKVEEFASISQAIEHTYPALVLSNKRSPEQPGLM 508
Query: 319 WRG-XXXXXXXXXXXXXXXXXXDKYYINNSFVALESTVPKGLLPVDLIVKEFSDEE 155
WRG DKYYINNSF ALESTVP+GLLPVDLIVKEFSD+E
Sbjct: 509 WRGSSDDDNDSDDEISDDDDHEDKYYINNSFEALESTVPEGLLPVDLIVKEFSDDE 564
Score = 126 bits (317), Expect(2) = 5e-68
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLKELVPCVLLSFDDE ILMWRGKDWKPMY NAPPVVSSRI V DE+NTS RSGTAKD
Sbjct: 373 AKLKELVPCVLLSFDDEQILMWRGKDWKPMYGNAPPVVSSRIDAVADEINTSGRSGTAKD 432
Query: 551 CSKADAKTRSSSPRM 507
S A ++TRS+SP+M
Sbjct: 433 YSNAHSRTRSTSPKM 447
>ref|XP_002315689.2| hypothetical protein POPTR_0010s05230g [Populus trichocarpa]
gi|550329113|gb|EEF01860.2| hypothetical protein
POPTR_0010s05230g [Populus trichocarpa]
Length = 557
Score = 86.3 bits (212), Expect(2) = 1e-33
Identities = 49/111 (44%), Positives = 67/111 (60%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSSKHVPEQSRM 323
M LWK+A++S KA+LL++IDL PD LL KVEEF ISQATEH+YPAL++SS+ S
Sbjct: 446 MLLWKHALESNKAILLDEIDLGPDALLTKVEEFEGISQATEHSYPALVMSSEDGSSNSIS 505
Query: 322 MWRGXXXXXXXXXXXXXXXXXXDKYYINNSFVALESTVPKGLLPVDLIVKE 170
+ D+YY + SF LE++ P G L +DLI ++
Sbjct: 506 TFE---DDSHSENFSEDDMYSDDEYYDSESFEELETSAPPGSLSIDLIAEK 553
Score = 84.3 bits (207), Expect(2) = 1e-33
Identities = 45/77 (58%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTA-K 555
AKLK+LVPCVLLSFDDE ILMWRG+DWK MY A P +S D + S+ SG +
Sbjct: 372 AKLKDLVPCVLLSFDDEQILMWRGQDWKSMYPEARPSIS--FPAELDIASGSDDSGKSDD 429
Query: 554 DCSKADAKTRSSSPRMM 504
DC +DAK SSSP+MM
Sbjct: 430 DCDNSDAKILSSSPKMM 446
>ref|XP_002525395.1| conserved hypothetical protein [Ricinus communis]
gi|223535358|gb|EEF37033.1| conserved hypothetical
protein [Ricinus communis]
Length = 561
Score = 85.5 bits (210), Expect(2) = 2e-32
Identities = 51/118 (43%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSSKHVPEQSRM 323
MSLW+ AI+S KA+LL+ IDL PDDLL KVEEF ISQATEH+YPA+ILSS+ +
Sbjct: 444 MSLWECAIESSKAILLDQIDLGPDDLLRKVEEFECISQATEHSYPAVILSSEDGANNTVA 503
Query: 322 MWRG---XXXXXXXXXXXXXXXXXXDKYYINNSFVALESTVPKGLLPVDLIVKEFSDE 158
+ D+YY ++SF +++ VP G LPVD + + E
Sbjct: 504 AFGDDSLSGSFTEEDDTYTDDEYEDDEYYDSDSFEEVDTAVPLGSLPVDRLAERLHQE 561
Score = 80.5 bits (197), Expect(2) = 2e-32
Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAK- 555
AKLKELVPCVLLSFDDEHILMWRG++WKPMY P V + D + S+ SG +
Sbjct: 371 AKLKELVPCVLLSFDDEHILMWRGQNWKPMYPEVPSVSTP---DAADFTSGSDDSGKFED 427
Query: 554 DCSKADAKTRSSSPRMM 504
D S DA SSP+MM
Sbjct: 428 DPSNRDANVVRSSPKMM 444
>gb|EMJ28681.1| hypothetical protein PRUPE_ppa003604mg [Prunus persica]
Length = 562
Score = 85.5 bits (210), Expect(2) = 2e-29
Identities = 49/115 (42%), Positives = 68/115 (59%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSSKHVPEQSRM 323
MSLWK +IDS KALLL+++DL PD LL KVEEF +SQATEH+YPALI+SS+ S
Sbjct: 449 MSLWKRSIDSNKALLLDELDLDPDALLKKVEEFEGVSQATEHSYPALIVSSEDGTSSSVQ 508
Query: 322 MWRGXXXXXXXXXXXXXXXXXXDKYYINNSFVALESTVPKGLLPVDLIVKEFSDE 158
++ + +++F +S +P G LPVD+IV+E +
Sbjct: 509 VFEEVPQSDPYSEYDDYSDNYDYESDDDDAFYDSDS-IPLGSLPVDVIVEELDHD 562
Score = 70.9 bits (172), Expect(2) = 2e-29
Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLKELVPCVLLSFDDEHILMWRG +W M++ AP + + + +G KD
Sbjct: 377 AKLKELVPCVLLSFDDEHILMWRGPNWISMHQAAPSPSDTA------DFDILSSTGRGKD 430
Query: 551 CS---KADAKTRSSSPRMM 504
K D KT +SP+MM
Sbjct: 431 YDKPCKPDTKTVMTSPKMM 449
>gb|EOY00533.1| RNA-binding CRS1 / YhbY (CRM) domain-containing protein [Theobroma
cacao]
Length = 562
Score = 84.3 bits (207), Expect(2) = 5e-28
Identities = 42/76 (55%), Positives = 49/76 (64%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLKEL PCVLLSFDDE ILMWRG+DWK MY AP + G+ ++ S +S A D
Sbjct: 373 AKLKELAPCVLLSFDDEQILMWRGQDWKSMYPEAPSTLLPSKSGISSGLDDSAKS--ADD 430
Query: 551 CSKADAKTRSSSPRMM 504
C D K SSP+MM
Sbjct: 431 CHTPDIKNGISSPKMM 446
Score = 67.0 bits (162), Expect(2) = 5e-28
Identities = 47/118 (39%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSSKHVPEQSRM 323
M+LW NAI+S KALLL++I L PD LL KVEEF IS TEH+ AL+LSS+ + S
Sbjct: 446 MTLWNNAIESNKALLLDEIALGPDALLEKVEEFEGISLVTEHSCEALVLSSE---DGSGS 502
Query: 322 MWRGXXXXXXXXXXXXXXXXXXDKYYINNSFVALE---STVPKGLLPVDLIVKEFSDE 158
D IN+ + +E S++P G LPVD I + E
Sbjct: 503 SMAESEAGSYSEDFGGENEIYSDDDIINDEYYDVEEVDSSIPLGSLPVDKIAERLRRE 560
>gb|EXB82569.1| CRS2-associated factor 2 [Morus notabilis]
Length = 571
Score = 79.3 bits (194), Expect(2) = 2e-27
Identities = 49/117 (41%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSSKHVPEQS-- 329
+SLWK A++S KA+LL++I+L PD LL KVEEF ISQATEH+YPALI+S + S
Sbjct: 461 LSLWKRALESNKAILLDEINLGPDALLMKVEEFEGISQATEHSYPALIVSGEDGTSSSME 520
Query: 328 RMMWRGXXXXXXXXXXXXXXXXXXDKYYINNSFVALESTVPKGLLPVDLIVKEFSDE 158
+ D YY + +S++P G LPVD+I K+FS +
Sbjct: 521 ESEYLSQSDDDNDDFIDDYDEENDDVYYDS------DSSLPLGSLPVDVIAKKFSQD 571
Score = 70.5 bits (171), Expect(2) = 2e-27
Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSE--RSGTA 558
AKLKELVPCVLLSFDDE ILMWRG DWK MY + + S +G +++ TS+ RSG
Sbjct: 388 AKLKELVPCVLLSFDDEQILMWRGSDWKSMYRDVS--IPSILG---NDVVTSDLHRSGKD 442
Query: 557 KDCS-KADAKTRSSSPRMM 504
D S D +T +SP+M+
Sbjct: 443 NDDSGDPDTQTVRTSPKML 461
>ref|XP_004298480.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 572
Score = 76.6 bits (187), Expect(2) = 1e-26
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSSKHVPEQSRM 323
MSLW+ +I++ KALLLE++DL PD LL KVEEF ISQ TEH+YPALILSS+ +
Sbjct: 453 MSLWRRSIETKKALLLEELDLDPDALLEKVEEFEGISQVTEHSYPALILSSEDGTSNAIQ 512
Query: 322 MWRGXXXXXXXXXXXXXXXXXXDKYYI-----NNSFVALESTVPKGLLPVDLIVKEFSDE 158
++ D Y+ ++ + +VP G LP+D+I ++ +
Sbjct: 513 VYEDAPPNGPYSEYEEAYSDDNDDDYVYEDDSDDDALYDSDSVPLGSLPIDVIAEKLDHD 572
Score = 70.1 bits (170), Expect(2) = 1e-26
Identities = 39/76 (51%), Positives = 44/76 (57%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLKELVPCVLLSFDDE ILMWRG DW + P S + D + + R
Sbjct: 378 AKLKELVPCVLLSFDDEQILMWRGPDWVSISGTRLPSAYSDVYSDVDIITSKGRVKDDDA 437
Query: 551 CSKADAKTRSSSPRMM 504
SK D KT SSP+MM
Sbjct: 438 SSKPDTKTVISSPKMM 453
>ref|XP_006416086.1| hypothetical protein EUTSA_v10007246mg [Eutrema salsugineum]
gi|557093857|gb|ESQ34439.1| hypothetical protein
EUTSA_v10007246mg [Eutrema salsugineum]
Length = 563
Score = 75.5 bits (184), Expect(2) = 2e-26
Identities = 40/78 (51%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAP--PVVSSRIGGVKDEMNTSERSGTA 558
AKLKELVPCVLLSFDDE ILMWRG+DWK + + P P++S ++DE++ S+++G
Sbjct: 381 AKLKELVPCVLLSFDDEQILMWRGRDWKSRFLDNPLTPLLSET--NIEDELDPSDKTGEE 438
Query: 557 KDCSKADAKTRSSSPRMM 504
+ S D T SSP+M+
Sbjct: 439 QTAS--DPNTVISSPKMI 454
Score = 70.5 bits (171), Expect(2) = 2e-26
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSS 350
+SLWK A++S KA++LE++DL PD+LL KVEEF SQA EHTY AL+L S
Sbjct: 454 ISLWKRALESSKAIVLEELDLSPDNLLEKVEEFEGTSQAAEHTYTALVLPS 504
>ref|XP_006483899.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Citrus
sinensis]
Length = 552
Score = 73.9 bits (180), Expect(2) = 2e-26
Identities = 35/50 (70%), Positives = 43/50 (86%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILS 353
+SLWK AI+S KAL+L++I+L PDDLL KVEEF ISQA EH+YPAL+LS
Sbjct: 439 ISLWKRAIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLS 488
Score = 72.0 bits (175), Expect(2) = 2e-26
Identities = 42/76 (55%), Positives = 48/76 (63%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLKELVPCVLLSFDDE ILMWRGKDWK MY PP S+ + D ++ SGT D
Sbjct: 369 AKLKELVPCVLLSFDDEQILMWRGKDWKSMYPE-PPSFSNPVD--LDIAGDADGSGTPSD 425
Query: 551 CSKADAKTRSSSPRMM 504
T SSP+M+
Sbjct: 426 --DPSQGTIRSSPKMI 439
>ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citrus clementina]
gi|557540524|gb|ESR51568.1| hypothetical protein
CICLE_v10031138mg [Citrus clementina]
Length = 552
Score = 73.9 bits (180), Expect(2) = 2e-26
Identities = 35/50 (70%), Positives = 43/50 (86%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILS 353
+SLWK AI+S KAL+L++I+L PDDLL KVEEF ISQA EH+YPAL+LS
Sbjct: 439 ISLWKRAIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLS 488
Score = 72.0 bits (175), Expect(2) = 2e-26
Identities = 42/76 (55%), Positives = 48/76 (63%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLKELVPCVLLSFDDE ILMWRGKDWK MY PP S+ + D ++ SGT D
Sbjct: 369 AKLKELVPCVLLSFDDEQILMWRGKDWKSMYPE-PPSFSNPVD--LDIAGDADGSGTPSD 425
Query: 551 CSKADAKTRSSSPRMM 504
T SSP+M+
Sbjct: 426 --DPSQGTIRSSPKMI 439
>ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Cucumis sativus]
Length = 602
Score = 79.3 bits (194), Expect(2) = 3e-25
Identities = 51/115 (44%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Frame = -1
Query: 496 LWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSSKHV--PEQSRM 323
LW++AIDS KALLL++I L PDDLL KVEEF ISQATEH+YPA I SS+ V P+ S
Sbjct: 497 LWEHAIDSNKALLLDEIGLAPDDLLEKVEEFERISQATEHSYPAFITSSEDVSSPDDSPK 556
Query: 322 MWRGXXXXXXXXXXXXXXXXXXDKYYINNSFVALESTVPKGLLPVDLIVKEFSDE 158
+ F + VP G LPVD+I K+ S E
Sbjct: 557 SQDHTEANYNSDDDVGRE---------EDLFDNADPLVPLGSLPVDIIAKKLSSE 602
Score = 62.8 bits (151), Expect(2) = 3e-25
Identities = 33/75 (44%), Positives = 41/75 (54%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLKELVPCVLLSFD+E ILMWRGKDWK + + D + + S D
Sbjct: 420 AKLKELVPCVLLSFDNEQILMWRGKDWKSIISDDRSAPLPSRASSNDSLGSPGESLENSD 479
Query: 551 CSKADAKTRSSSPRM 507
+ T +SP+M
Sbjct: 480 LLHGNHHTIKTSPKM 494
>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
Length = 603
Score = 75.9 bits (185), Expect(2) = 5e-25
Identities = 46/113 (40%), Positives = 60/113 (53%)
Frame = -1
Query: 496 LWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSSKHVPEQSRMMW 317
LW+ AIDS KAL+L++I L PD+LL +VEEF ISQATEH+YPA I SS+ V +
Sbjct: 498 LWERAIDSNKALMLDEIGLAPDELLERVEEFERISQATEHSYPAFITSSEEVSSPADSPE 557
Query: 316 RGXXXXXXXXXXXXXXXXXXDKYYINNSFVALESTVPKGLLPVDLIVKEFSDE 158
+ F ++ VP G LPVD+I K+ S E
Sbjct: 558 SQDHSEANYNSDDDVGRE-------EDLFDNVDPLVPLGSLPVDIIAKKLSSE 603
Score = 65.5 bits (158), Expect(2) = 5e-25
Identities = 34/75 (45%), Positives = 42/75 (56%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLKELVPCVLLSFD+E ILMWRGKDWK + + D + +S S D
Sbjct: 421 AKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRASSNDSLGSSGESVENSD 480
Query: 551 CSKADAKTRSSSPRM 507
+ T +SP+M
Sbjct: 481 LLNGNHHTIKTSPKM 495
>ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Cucumis sativus]
Length = 603
Score = 79.3 bits (194), Expect(2) = 7e-25
Identities = 51/115 (44%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Frame = -1
Query: 496 LWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSSKHV--PEQSRM 323
LW++AIDS KALLL++I L PDDLL KVEEF ISQATEH+YPA I SS+ V P+ S
Sbjct: 498 LWEHAIDSNKALLLDEIGLAPDDLLEKVEEFERISQATEHSYPAFITSSEDVSSPDDSPK 557
Query: 322 MWRGXXXXXXXXXXXXXXXXXXDKYYINNSFVALESTVPKGLLPVDLIVKEFSDE 158
+ F + VP G LPVD+I K+ S E
Sbjct: 558 SQDHTEANYNSDDDVGRE---------EDLFDNADPLVPLGSLPVDIIAKKLSSE 603
Score = 61.6 bits (148), Expect(2) = 7e-25
Identities = 33/75 (44%), Positives = 41/75 (54%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLKELVPCVLLSFD+E ILMWRGKDWK + + D + + S D
Sbjct: 421 AKLKELVPCVLLSFDNEQILMWRGKDWKSIISDDCSAPLPSRASSNDSLGSPGESLENSD 480
Query: 551 CSKADAKTRSSSPRM 507
+ T +SP+M
Sbjct: 481 LLHDNHHTIKTSPKM 495
>ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Glycine
max]
Length = 593
Score = 70.1 bits (170), Expect(2) = 2e-24
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLK+LVPCVLLSFDDE ILMWRGKDWK Y PV + + + E SG D
Sbjct: 376 AKLKDLVPCVLLSFDDEQILMWRGKDWKSRYPQPLPVFTPSKANI---VGNLENSGETDD 432
Query: 551 CS-KADAKTRSSSPRMM 504
K D ++SP+M+
Sbjct: 433 NQYKHDGNMVNTSPKML 449
Score = 68.9 bits (167), Expect(2) = 2e-24
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSSK 347
+SLWK AI S KALLL++ +L PD LL KVEEF ++SQA EH++PA LSSK
Sbjct: 449 LSLWKRAIQSSKALLLDEFNLGPDALLEKVEEFDTVSQALEHSHPAFSLSSK 500
>ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
lyrata] gi|297339127|gb|EFH69544.1| hypothetical protein
ARALYDRAFT_335585 [Arabidopsis lyrata subsp. lyrata]
Length = 565
Score = 72.0 bits (175), Expect(2) = 9e-24
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLKELVPCVLLSFDDE ILMWRG+DWK + + P + S + +E++ S++ +
Sbjct: 384 AKLKELVPCVLLSFDDEQILMWRGRDWKSRFVDNPLIPSLSETNIANELDPSDKPSDEQT 443
Query: 551 CSKADAKTRSSSPRMM 504
S D + SSP+M+
Sbjct: 444 VS--DPSSTISSPKMI 457
Score = 65.1 bits (157), Expect(2) = 9e-24
Identities = 29/51 (56%), Positives = 40/51 (78%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSS 350
+SLWK A++S KA++LE++DL PDDLL KVEE S A EH+Y A++LS+
Sbjct: 457 ISLWKRALESSKAVILEELDLGPDDLLKKVEELEGTSLAAEHSYTAMVLSN 507
>ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]
gi|75173812|sp|Q9LDA9.1|CAF2P_ARATH RecName:
Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|8778588|gb|AAF79596.1|AC007945_16 F28C11.4
[Arabidopsis thaliana]
gi|9295699|gb|AAF87005.1|AC005292_14 F26F24.27
[Arabidopsis thaliana] gi|17065312|gb|AAL32810.1|
Unknown protein [Arabidopsis thaliana]
gi|21387129|gb|AAM47968.1| unknown protein [Arabidopsis
thaliana] gi|332192262|gb|AEE30383.1| CRS2-associated
factor 2 [Arabidopsis thaliana]
Length = 564
Score = 70.1 bits (170), Expect(2) = 3e-23
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLKELVPCVLLSFDDE ILMWRG++WK + + P + S +E++ S++ +++
Sbjct: 382 AKLKELVPCVLLSFDDEQILMWRGREWKSRFVDNPLIPSLSETNTTNELDPSDK--PSEE 439
Query: 551 CSKADAKTRSSSPRMM 504
+ A+ T SSP+M+
Sbjct: 440 QTVANPSTTISSPKMI 455
Score = 65.1 bits (157), Expect(2) = 3e-23
Identities = 29/51 (56%), Positives = 40/51 (78%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSS 350
+SLW+ A++S KA++LE++DL PDDLL KVEE S A EHTY A++LS+
Sbjct: 455 ISLWQRALESSKAVILEELDLGPDDLLKKVEELEGTSLAAEHTYTAMVLSN 505
>gb|ESW25745.1| hypothetical protein PHAVU_003G062100g [Phaseolus vulgaris]
Length = 575
Score = 69.3 bits (168), Expect(2) = 1e-22
Identities = 38/78 (48%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTA-- 558
AKLK+LVPCVLLSFDDE IL+WRGKDWK Y PV + G SE SG A
Sbjct: 379 AKLKDLVPCVLLSFDDEQILIWRGKDWKSRYHQPVPVFAPSKSGF---TGNSESSGEADG 435
Query: 557 KDCSKADAKTRSSSPRMM 504
D ++SP+M+
Sbjct: 436 NQTEHGDNNVVNTSPKML 453
Score = 63.9 bits (154), Expect(2) = 1e-22
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALILSSK 347
+SLWK AI+S KALLL++ +L PD LL KVEEF SQA EH++PA LS K
Sbjct: 453 LSLWKRAIESSKALLLDEFNLGPDCLLEKVEEFEIASQALEHSHPAFSLSFK 504
>ref|XP_006307133.1| hypothetical protein CARUB_v10008723mg [Capsella rubella]
gi|482575844|gb|EOA40031.1| hypothetical protein
CARUB_v10008723mg [Capsella rubella]
Length = 565
Score = 68.6 bits (166), Expect(2) = 2e-22
Identities = 35/76 (46%), Positives = 51/76 (67%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYENAPPVVSSRIGGVKDEMNTSERSGTAKD 552
AKLKELVPCVLLSFDDE ILMWRG++WK + + P + + + +E++ S+++ +
Sbjct: 383 AKLKELVPCVLLSFDDEQILMWRGREWKSRFLDNPLIPNLSETNIVNELDPSDKAIEEEP 442
Query: 551 CSKADAKTRSSSPRMM 504
S D T SSP+M+
Sbjct: 443 VS--DPNTVISSPKMI 456
Score = 64.3 bits (155), Expect(2) = 2e-22
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = -1
Query: 502 MSLWKNAIDSGKALLLEDIDLKPDDLLNKVEEFGSISQATEHTYPALIL 356
+SLWK A+++ KA++LE++DL PDDLL KVEE S A EHTY AL+L
Sbjct: 456 ISLWKRALETSKAVILEELDLGPDDLLKKVEELEGTSLAAEHTYTALVL 504
>ref|XP_002455560.1| hypothetical protein SORBIDRAFT_03g013160 [Sorghum bicolor]
gi|241927535|gb|EES00680.1| hypothetical protein
SORBIDRAFT_03g013160 [Sorghum bicolor]
Length = 614
Score = 63.2 bits (152), Expect(2) = 4e-19
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Frame = -1
Query: 496 LWKNAIDSGKALLLEDI---DLKPDDLLNKVEEFGSISQATEHTYPALILSSKHVPEQSR 326
LWK+A+DS ALLL+D DL PD LL VEEF SQA EH++PAL++++ V +S
Sbjct: 492 LWKSAVDSSLALLLDDAEANDLTPDSLLTLVEEFSVTSQAVEHSFPALLVTNGEVNTESL 551
Query: 325 MM-------WRGXXXXXXXXXXXXXXXXXXDKYYINNSFVALESTVPKGLLPVDLIVKEF 167
D+++ + LES+VP G LP+D ++++
Sbjct: 552 SAEYINDDESETSIAGNEEGQLEQSPDLSGDEHFELDMLERLESSVPLGSLPIDGMIEQL 611
Query: 166 SDE 158
+ E
Sbjct: 612 NSE 614
Score = 58.2 bits (139), Expect(2) = 4e-19
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Frame = -3
Query: 731 AKLKELVPCVLLSFDDEHILMWRGKDWKPMYE---NAPPVVSSRIGGVKDEMNTSERSGT 561
AKL++LVPCVLLSFDDE ILM+RGK+WK Y P V + +MN+S+
Sbjct: 415 AKLRDLVPCVLLSFDDEQILMYRGKEWKSRYSKPLTLIPKVPKNNLAMSSDMNSSDEVSD 474
Query: 560 A 558
A
Sbjct: 475 A 475