BLASTX nr result
ID: Atropa21_contig00017631
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00017631
(531 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006365739.1| PREDICTED: tRNA-splicing endonuclease subuni... 155 7e-36
ref|XP_006365743.1| PREDICTED: tRNA-splicing endonuclease subuni... 154 9e-36
ref|XP_004241267.1| PREDICTED: tRNA-splicing endonuclease subuni... 154 9e-36
gb|ESW34265.1| hypothetical protein PHAVU_001G138100g [Phaseolus... 110 5e-29
ref|XP_003523107.1| PREDICTED: tRNA-splicing endonuclease subuni... 107 2e-28
ref|XP_006853554.1| hypothetical protein AMTR_s00032p00237240 [A... 115 3e-28
ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, p... 129 4e-28
dbj|BAA88627.1| tRNA intron endonuclease [Arabidopsis thaliana] ... 110 8e-28
ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni... 127 2e-27
ref|XP_006588481.1| PREDICTED: uncharacterized protein LOC100810... 104 4e-27
ref|NP_001240148.1| uncharacterized protein LOC100810335 [Glycin... 104 4e-27
ref|NP_190145.1| tRNA-splicing endonuclease subunit Sen2-1 [Arab... 106 2e-26
ref|XP_002866377.1| predicted protein [Arabidopsis lyrata subsp.... 103 7e-26
ref|XP_006488175.1| PREDICTED: tRNA-splicing endonuclease subuni... 121 9e-26
ref|XP_006424653.1| hypothetical protein CICLE_v10029956mg [Citr... 121 9e-26
ref|XP_002875735.1| tRNA intron endonuclease [Arabidopsis lyrata... 103 1e-25
ref|NP_974966.1| tRNA splicing endonuclease subunit Sen2-2 [Arab... 103 5e-25
ref|NP_200831.1| tRNA splicing endonuclease subunit Sen2-2 [Arab... 103 5e-25
gb|EPS57289.1| hypothetical protein M569_17530, partial [Genlise... 106 5e-25
ref|XP_006281579.1| hypothetical protein CARUB_v10027691mg [Caps... 102 6e-25
>ref|XP_006365739.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like [Solanum
tuberosum]
Length = 242
Score = 155 bits (391), Expect = 7e-36
Identities = 81/103 (78%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
Frame = +2
Query: 8 LQEHMVPMLHDRFSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLS 187
L +HM + F LF+ FSHLRSKNWVTRSGSQYGVDFV Y H+PALVHSEYAVLVLS
Sbjct: 107 LWKHMTSK-KETFPILFKVFSHLRSKNWVTRSGSQYGVDFVAYRHHPALVHSEYAVLVLS 165
Query: 188 AQDGSANSRLRV*SDFPCTLRLCGSVAKTLLVLDIE-QQQGCA 313
AQDGSAN RLRV SDF CTLRLCGSVAKTLL+LDIE QQQ CA
Sbjct: 166 AQDGSANGRLRVWSDFHCTLRLCGSVAKTLLILDIEQQQQSCA 208
Score = 68.9 bits (167), Expect = 7e-10
Identities = 37/56 (66%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +1
Query: 283 SRY*ATARLCMW*WRKHFSVLDIEQQQD-CAISPTCLDNYVVEERTITRWSPEQGR 447
S + T RLC K +LDIEQQQ CA SP+CLDNY+VEERTITRWSPEQGR
Sbjct: 179 SDFHCTLRLCGS-VAKTLLILDIEQQQQSCAASPSCLDNYIVEERTITRWSPEQGR 233
>ref|XP_006365743.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like [Solanum
tuberosum]
Length = 243
Score = 154 bits (390), Expect = 9e-36
Identities = 77/102 (75%), Positives = 86/102 (84%)
Frame = +2
Query: 8 LQEHMVPMLHDRFSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLS 187
L +HM + F LF+AFSHLRSKNWV RSGSQYGVDFV Y H+PALVHSEYAVLVLS
Sbjct: 107 LWKHMTSS-RENFPILFKAFSHLRSKNWVVRSGSQYGVDFVAYRHHPALVHSEYAVLVLS 165
Query: 188 AQDGSANSRLRV*SDFPCTLRLCGSVAKTLLVLDIEQQQGCA 313
AQDG+A+ RL+V SDF CTLRLCGSVAKTLL+LDIE+QQ CA
Sbjct: 166 AQDGNAHGRLKVWSDFHCTLRLCGSVAKTLLILDIEEQQSCA 207
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/55 (67%), Positives = 41/55 (74%)
Frame = +1
Query: 283 SRY*ATARLCMW*WRKHFSVLDIEQQQDCAISPTCLDNYVVEERTITRWSPEQGR 447
S + T RLC K +LDIE+QQ CA SP+CLDNYVVEERTITRWSPEQGR
Sbjct: 179 SDFHCTLRLCGS-VAKTLLILDIEEQQSCATSPSCLDNYVVEERTITRWSPEQGR 232
>ref|XP_004241267.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like [Solanum
lycopersicum]
Length = 243
Score = 154 bits (390), Expect = 9e-36
Identities = 76/102 (74%), Positives = 87/102 (85%)
Frame = +2
Query: 8 LQEHMVPMLHDRFSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLS 187
L +HM+ + F LF+AFSHLRSKNWV RSGSQYGVDFV Y H+PALVHS+YAVLVLS
Sbjct: 107 LWKHMISR-RENFPILFKAFSHLRSKNWVVRSGSQYGVDFVAYRHHPALVHSQYAVLVLS 165
Query: 188 AQDGSANSRLRV*SDFPCTLRLCGSVAKTLLVLDIEQQQGCA 313
AQDG+AN RL+V SDF CTLRLCGSVAKTLL+L+IE+QQ CA
Sbjct: 166 AQDGNANGRLKVWSDFHCTLRLCGSVAKTLLILNIEEQQSCA 207
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +1
Query: 283 SRY*ATARLCMW*WRKHFSVLDIEQQQDCAISPTCLDNYVVEERTITRWSPEQGR 447
S + T RLC K +L+IE+QQ CA SP+CLDNYVVEERTITRWSPEQGR
Sbjct: 179 SDFHCTLRLCGS-VAKTLLILNIEEQQSCATSPSCLDNYVVEERTITRWSPEQGR 232
>gb|ESW34265.1| hypothetical protein PHAVU_001G138100g [Phaseolus vulgaris]
Length = 332
Score = 110 bits (274), Expect(2) = 5e-29
Identities = 56/95 (58%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +2
Query: 17 HMVPMLHDRFSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLS-AQ 193
H + + F ++A+SHLR KNWV RSGSQYGVDFV Y H+P+ VHSEY VLVLS +
Sbjct: 205 HYMKSKKETFPCFYKAYSHLRMKNWVVRSGSQYGVDFVIYRHHPSRVHSEYGVLVLSDGE 264
Query: 194 DGSANSRLRV*SDFPCTLRLCGSVAKTLLVLDIEQ 298
D N RLRV SD CT RL GSVAK LLVL + +
Sbjct: 265 DKDLNGRLRVWSDIHCTTRLVGSVAKILLVLHVNK 299
Score = 43.5 bits (101), Expect(2) = 5e-29
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = +1
Query: 376 SPTCLDNYVVEERTITRWSPEQGR 447
SP CL NY VEE TITRWSPEQ R
Sbjct: 306 SPLCLANYTVEECTITRWSPEQNR 329
>ref|XP_003523107.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like isoform
X1 [Glycine max] gi|571451211|ref|XP_006578664.1|
PREDICTED: tRNA-splicing endonuclease subunit
Sen2-1-like isoform X2 [Glycine max]
gi|571451213|ref|XP_006578665.1| PREDICTED:
tRNA-splicing endonuclease subunit Sen2-1-like isoform
X3 [Glycine max]
Length = 255
Score = 107 bits (266), Expect(2) = 2e-28
Identities = 55/98 (56%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Frame = +2
Query: 17 HMVPMLHDRFSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLS-AQ 193
H + + F ++A+SHLR KNWV RSG+QYG DFV Y H+PA VHSEY VLVLS +
Sbjct: 117 HYMKSKKETFPCFYKAYSHLRMKNWVVRSGAQYGADFVVYRHHPARVHSEYGVLVLSDEE 176
Query: 194 DGSANSRLRV*SDFPCTLRLCGSVAKTLLVLDIEQQQG 307
D N RLRV SD CT RL G VAK LLVL + + G
Sbjct: 177 DKDLNGRLRVWSDVHCTTRLLGGVAKILLVLYVNRNGG 214
Score = 44.3 bits (103), Expect(2) = 2e-28
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +1
Query: 376 SPTCLDNYVVEERTITRWSPEQGR 447
SP CL NY VEERTITRW+PEQ R
Sbjct: 218 SPLCLANYTVEERTITRWNPEQCR 241
>ref|XP_006853554.1| hypothetical protein AMTR_s00032p00237240 [Amborella trichopoda]
gi|548857207|gb|ERN15021.1| hypothetical protein
AMTR_s00032p00237240 [Amborella trichopoda]
Length = 243
Score = 115 bits (288), Expect(2) = 3e-28
Identities = 57/85 (67%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +2
Query: 44 FSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLSAQD-GSANSRLR 220
F L++A+SHLRSKNWV R GSQYG DFV Y H+PALVHSEYAVLVLS +D SRLR
Sbjct: 117 FPRLYKAYSHLRSKNWVVRQGSQYGTDFVAYRHHPALVHSEYAVLVLSEKDQDQGPSRLR 176
Query: 221 V*SDFPCTLRLCGSVAKTLLVLDIE 295
V SD+ +R+CGS+AKTLLVLD++
Sbjct: 177 VWSDWHSIVRVCGSIAKTLLVLDVD 201
Score = 35.4 bits (80), Expect(2) = 3e-28
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 328 KHFSVLDIEQQQDCAISPTCLDNYVVEERTITRWSPEQGR 447
K VLD++ SP+CL+ + V E I RW PEQ R
Sbjct: 193 KTLLVLDVDISGADESSPSCLERFCVSEYKIARWVPEQHR 232
>ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
communis] gi|223534295|gb|EEF36007.1| tRNA-splicing
endonuclease subunit Sen2-2, putative [Ricinus communis]
Length = 237
Score = 129 bits (324), Expect = 4e-28
Identities = 62/85 (72%), Positives = 70/85 (82%)
Frame = +2
Query: 44 FSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLSAQDGSANSRLRV 223
F ++A+SHLR KNWV R GSQYGVDFV Y H+P+LVHSEYAVLVLS +D +AN RLRV
Sbjct: 118 FPDFYKAYSHLRMKNWVVRPGSQYGVDFVAYRHHPSLVHSEYAVLVLSEEDANANGRLRV 177
Query: 224 *SDFPCTLRLCGSVAKTLLVLDIEQ 298
SDF CTLRLCGSVAKTLLVL I +
Sbjct: 178 WSDFHCTLRLCGSVAKTLLVLGINK 202
>dbj|BAA88627.1| tRNA intron endonuclease [Arabidopsis thaliana]
gi|6635258|dbj|BAA88628.1| tRNA intron endonuclease
[Arabidopsis thaliana]
Length = 237
Score = 110 bits (274), Expect(2) = 8e-28
Identities = 56/86 (65%), Positives = 67/86 (77%)
Frame = +2
Query: 44 FSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLSAQDGSANSRLRV 223
F+ L++A+SHLRSKNW+ RSG QYGVDFV Y H+P+LVHSEYAVLV Q S N RL+V
Sbjct: 118 FAILYKAYSHLRSKNWIVRSGLQYGVDFVVYRHHPSLVHSEYAVLV---QSISGNDRLKV 174
Query: 224 *SDFPCTLRLCGSVAKTLLVLDIEQQ 301
SD C++RL GSVAKTLLVL + Q
Sbjct: 175 WSDIHCSVRLTGSVAKTLLVLYVNGQ 200
Score = 39.3 bits (90), Expect(2) = 8e-28
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +1
Query: 379 PTCLDNYVVEERTITRWSPEQGR 447
P CLD Y VEE+TI RWSPE R
Sbjct: 209 PLCLDEYTVEEQTIRRWSPELSR 231
>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
vinifera]
Length = 242
Score = 127 bits (319), Expect = 2e-27
Identities = 61/87 (70%), Positives = 71/87 (81%)
Frame = +2
Query: 38 DRFSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLSAQDGSANSRL 217
+ F + A+SHLR KNWV RSGSQYGVDFV Y H+PALVHSEYAVLVLS ++ +AN RL
Sbjct: 116 ETFPDFYMAYSHLRIKNWVVRSGSQYGVDFVAYRHHPALVHSEYAVLVLSEENENANGRL 175
Query: 218 RV*SDFPCTLRLCGSVAKTLLVLDIEQ 298
RV SDF CT+RLCGSVAKTLLV+ I +
Sbjct: 176 RVWSDFDCTIRLCGSVAKTLLVIHINK 202
>ref|XP_006588481.1| PREDICTED: uncharacterized protein LOC100810335 isoform X1 [Glycine
max]
Length = 261
Score = 104 bits (260), Expect(2) = 4e-27
Identities = 54/95 (56%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +2
Query: 17 HMVPMLHDRFSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLS-AQ 193
H + + F ++A+SHLR KNWV RSG+QYG DFV Y H+PA VHSEY VLVLS +
Sbjct: 123 HYMKSKKETFPCFYKAYSHLRMKNWVVRSGAQYGADFVVYCHHPARVHSEYGVLVLSDGE 182
Query: 194 DGSANSRLRV*SDFPCTLRLCGSVAKTLLVLDIEQ 298
D N RLRV SD CT RL G VAK LLVL + +
Sbjct: 183 DKDLNGRLRVWSDVHCTTRLLGGVAKILLVLYVNR 217
Score = 42.4 bits (98), Expect(2) = 4e-27
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +1
Query: 340 VLDIEQQQDCAISPTCLDNYVVEERTITRWSPEQGR 447
VL + + SP CL NY +EE TITRW+PEQ R
Sbjct: 212 VLYVNRNGSSNESPLCLANYTIEEHTITRWNPEQCR 247
>ref|NP_001240148.1| uncharacterized protein LOC100810335 [Glycine max]
gi|571480897|ref|XP_006588482.1| PREDICTED:
uncharacterized protein LOC100810335 isoform X2 [Glycine
max] gi|255634724|gb|ACU17724.1| unknown [Glycine max]
Length = 255
Score = 104 bits (260), Expect(2) = 4e-27
Identities = 54/95 (56%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +2
Query: 17 HMVPMLHDRFSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLS-AQ 193
H + + F ++A+SHLR KNWV RSG+QYG DFV Y H+PA VHSEY VLVLS +
Sbjct: 117 HYMKSKKETFPCFYKAYSHLRMKNWVVRSGAQYGADFVVYCHHPARVHSEYGVLVLSDGE 176
Query: 194 DGSANSRLRV*SDFPCTLRLCGSVAKTLLVLDIEQ 298
D N RLRV SD CT RL G VAK LLVL + +
Sbjct: 177 DKDLNGRLRVWSDVHCTTRLLGGVAKILLVLYVNR 211
Score = 42.4 bits (98), Expect(2) = 4e-27
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +1
Query: 340 VLDIEQQQDCAISPTCLDNYVVEERTITRWSPEQGR 447
VL + + SP CL NY +EE TITRW+PEQ R
Sbjct: 206 VLYVNRNGSSNESPLCLANYTIEEHTITRWNPEQCR 241
>ref|NP_190145.1| tRNA-splicing endonuclease subunit Sen2-1 [Arabidopsis thaliana]
gi|145332759|ref|NP_001078245.1| tRNA-splicing
endonuclease subunit Sen2-1 [Arabidopsis thaliana]
gi|75181816|sp|Q9M1E8.1|SEN21_ARATH RecName:
Full=tRNA-splicing endonuclease subunit Sen2-1; AltName:
Full=tRNA-intron endonuclease Sen2-1; Short=AtSen1
gi|6996262|emb|CAB75488.1| putative protein [Arabidopsis
thaliana] gi|62320332|dbj|BAD94688.1| putative protein
[Arabidopsis thaliana] gi|88196761|gb|ABD43023.1|
At3g45590 [Arabidopsis thaliana]
gi|332644526|gb|AEE78047.1| tRNA-splicing endonuclease
subunit Sen2-1 [Arabidopsis thaliana]
gi|332644527|gb|AEE78048.1| tRNA-splicing endonuclease
subunit Sen2-1 [Arabidopsis thaliana]
Length = 237
Score = 106 bits (265), Expect(2) = 2e-26
Identities = 53/86 (61%), Positives = 67/86 (77%)
Frame = +2
Query: 44 FSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLSAQDGSANSRLRV 223
F+ L++A+SHLRSKNW+ RSG QYGVDFV Y H+P+LVHSEYAVLV Q N RL+V
Sbjct: 118 FAILYKAYSHLRSKNWIVRSGLQYGVDFVVYRHHPSLVHSEYAVLV---QSIGGNDRLKV 174
Query: 224 *SDFPCTLRLCGSVAKTLLVLDIEQQ 301
SD C++RL GSVAK+LLVL + ++
Sbjct: 175 WSDIHCSVRLTGSVAKSLLVLYVNRK 200
Score = 38.1 bits (87), Expect(2) = 2e-26
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 379 PTCLDNYVVEERTITRWSPEQGR 447
P CL++Y VEE+TI RWSPE R
Sbjct: 209 PLCLEDYTVEEQTIRRWSPELSR 231
>ref|XP_002866377.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312212|gb|EFH42636.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 248
Score = 103 bits (256), Expect(2) = 7e-26
Identities = 53/81 (65%), Positives = 60/81 (74%)
Frame = +2
Query: 44 FSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLSAQDGSANSRLRV 223
F F+A+SHLRSKNWV RSG QYGVDFV Y H+P+LVHSEY+VLV S + RLRV
Sbjct: 123 FPMFFKAYSHLRSKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLVQSGD----SDRLRV 178
Query: 224 *SDFPCTLRLCGSVAKTLLVL 286
SD C +RL GSVAKTLL L
Sbjct: 179 WSDIHCAVRLSGSVAKTLLTL 199
Score = 39.7 bits (91), Expect(2) = 7e-26
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +1
Query: 379 PTCLDNYVVEERTITRWSPEQGR 447
P CL+N+ VEE+TI+RWSPE R
Sbjct: 213 PVCLENFTVEEQTISRWSPELSR 235
>ref|XP_006488175.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like isoform
X1 [Citrus sinensis]
Length = 301
Score = 121 bits (304), Expect = 9e-26
Identities = 61/96 (63%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = +2
Query: 38 DRFSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLSAQDGSANSRL 217
+ F L++A+SHLR KNWV RSGSQYGVDFV Y H+P+LVHSEYAVLVL+ + N RL
Sbjct: 174 ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRL 233
Query: 218 RV*SDFPCTLRLCGSVAKTLLVLDIEQQ-QGCACGS 322
RV SD CT+RLCG VAKTLL+L I + QG A S
Sbjct: 234 RVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPS 269
>ref|XP_006424653.1| hypothetical protein CICLE_v10029956mg [Citrus clementina]
gi|568869948|ref|XP_006488176.1| PREDICTED:
tRNA-splicing endonuclease subunit Sen2-1-like isoform
X2 [Citrus sinensis] gi|568869950|ref|XP_006488177.1|
PREDICTED: tRNA-splicing endonuclease subunit
Sen2-1-like isoform X3 [Citrus sinensis]
gi|557526587|gb|ESR37893.1| hypothetical protein
CICLE_v10029956mg [Citrus clementina]
Length = 243
Score = 121 bits (304), Expect = 9e-26
Identities = 61/96 (63%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = +2
Query: 38 DRFSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLSAQDGSANSRL 217
+ F L++A+SHLR KNWV RSGSQYGVDFV Y H+P+LVHSEYAVLVL+ + N RL
Sbjct: 116 ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRL 175
Query: 218 RV*SDFPCTLRLCGSVAKTLLVLDIEQQ-QGCACGS 322
RV SD CT+RLCG VAKTLL+L I + QG A S
Sbjct: 176 RVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPS 211
>ref|XP_002875735.1| tRNA intron endonuclease [Arabidopsis lyrata subsp. lyrata]
gi|297321573|gb|EFH51994.1| tRNA intron endonuclease
[Arabidopsis lyrata subsp. lyrata]
Length = 237
Score = 103 bits (256), Expect(2) = 1e-25
Identities = 53/81 (65%), Positives = 63/81 (77%)
Frame = +2
Query: 44 FSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLSAQDGSANSRLRV 223
F+ ++A+SHLRSKNW+ RSG QYGVDFV Y H+P+LVHSEYAVLV Q S RL+V
Sbjct: 118 FAISYKAYSHLRSKNWIVRSGLQYGVDFVVYRHHPSLVHSEYAVLV---QSISGIDRLKV 174
Query: 224 *SDFPCTLRLCGSVAKTLLVL 286
SD C++RL GSVAKTLLVL
Sbjct: 175 WSDIHCSVRLTGSVAKTLLVL 195
Score = 39.3 bits (90), Expect(2) = 1e-25
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +1
Query: 379 PTCLDNYVVEERTITRWSPEQGR 447
P CL++Y+VEE+TI RWSPE R
Sbjct: 209 PLCLEDYIVEEQTIRRWSPELSR 231
>ref|NP_974966.1| tRNA splicing endonuclease subunit Sen2-2 [Arabidopsis thaliana]
gi|332009914|gb|AED97297.1| putative tRNA splicing
endonuclease subunit [Arabidopsis thaliana]
Length = 255
Score = 103 bits (256), Expect(2) = 5e-25
Identities = 53/81 (65%), Positives = 60/81 (74%)
Frame = +2
Query: 44 FSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLSAQDGSANSRLRV 223
F F+A+SHLRSKNWV RSG QYGVDFV Y H+P+LVHSEY+VLV S + RLRV
Sbjct: 123 FPMFFKAYSHLRSKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLVQSGD----SDRLRV 178
Query: 224 *SDFPCTLRLCGSVAKTLLVL 286
SD C +RL GSVAKTLL L
Sbjct: 179 WSDIHCAVRLSGSVAKTLLTL 199
Score = 37.0 bits (84), Expect(2) = 5e-25
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 385 CLDNYVVEERTITRWSPEQGR 447
CL+N+ VEE+TI+RWSPE R
Sbjct: 215 CLENFTVEEQTISRWSPELSR 235
>ref|NP_200831.1| tRNA splicing endonuclease subunit Sen2-2 [Arabidopsis thaliana]
gi|75180395|sp|Q9LSS3.1|SEN22_ARATH RecName:
Full=tRNA-splicing endonuclease subunit Sen2-2; AltName:
Full=tRNA-intron endonuclease Sen2-2; Short=AtSen2
gi|8885574|dbj|BAA97504.1| tRNA intron endonuclease
[Arabidopsis thaliana] gi|28393426|gb|AAO42135.1|
putative tRNA intron endonuclease [Arabidopsis thaliana]
gi|28827218|gb|AAO50453.1| putative tRNA intron
endonuclease [Arabidopsis thaliana]
gi|332009913|gb|AED97296.1| putative tRNA splicing
endonuclease subunit [Arabidopsis thaliana]
Length = 250
Score = 103 bits (256), Expect(2) = 5e-25
Identities = 53/81 (65%), Positives = 60/81 (74%)
Frame = +2
Query: 44 FSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLSAQDGSANSRLRV 223
F F+A+SHLRSKNWV RSG QYGVDFV Y H+P+LVHSEY+VLV S + RLRV
Sbjct: 118 FPMFFKAYSHLRSKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLVQSGD----SDRLRV 173
Query: 224 *SDFPCTLRLCGSVAKTLLVL 286
SD C +RL GSVAKTLL L
Sbjct: 174 WSDIHCAVRLSGSVAKTLLTL 194
Score = 37.0 bits (84), Expect(2) = 5e-25
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 385 CLDNYVVEERTITRWSPEQGR 447
CL+N+ VEE+TI+RWSPE R
Sbjct: 210 CLENFTVEEQTISRWSPELSR 230
>gb|EPS57289.1| hypothetical protein M569_17530, partial [Genlisea aurea]
Length = 234
Score = 106 bits (265), Expect(2) = 5e-25
Identities = 52/90 (57%), Positives = 68/90 (75%)
Frame = +2
Query: 56 FRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLSAQDGSANSRLRV*SDF 235
F +++LR+KNWV R GSQYGVDFV Y H+P+LVHSE+AVLVL + S+ RLR SDF
Sbjct: 121 FEGYAYLRAKNWVVRDGSQYGVDFVAYRHHPSLVHSEFAVLVLPS--SSSGDRLRSWSDF 178
Query: 236 PCTLRLCGSVAKTLLVLDIEQQQGCACGSG 325
CT+RLCGSVAKTLL++ + +++ G G
Sbjct: 179 HCTVRLCGSVAKTLLMVCVGRRRDTGDGGG 208
Score = 33.5 bits (75), Expect(2) = 5e-25
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 373 ISPTCLDNYVVEERTITRWSPEQGR 447
+ P L+ Y +EER +TRW+P+Q R
Sbjct: 209 VPPWSLERYRIEERVVTRWNPQQCR 233
>ref|XP_006281579.1| hypothetical protein CARUB_v10027691mg [Capsella rubella]
gi|482550283|gb|EOA14477.1| hypothetical protein
CARUB_v10027691mg [Capsella rubella]
Length = 255
Score = 102 bits (254), Expect(2) = 6e-25
Identities = 56/97 (57%), Positives = 66/97 (68%)
Frame = +2
Query: 44 FSSLFRAFSHLRSKNWVTRSGSQYGVDFVDYHHYPALVHSEYAVLVLSAQDGSANSRLRV 223
F ++A+SHLRSKNWV RSG QYGVDFV Y H+P+LVHSEY+VLV S + RLRV
Sbjct: 123 FPMFYKAYSHLRSKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLVQSGD----SDRLRV 178
Query: 224 *SDFPCTLRLCGSVAKTLLVLDIEQQQGCACGSGENI 334
SD C +RL GSVAKTLL L + G G G N+
Sbjct: 179 WSDIHCAVRLSGSVAKTLLTLYV---NGNFKGEGLNL 212
Score = 37.4 bits (85), Expect(2) = 6e-25
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +1
Query: 379 PTCLDNYVVEERTITRWSPEQGR 447
P CL+++ VEE+T++RWSPE R
Sbjct: 213 PACLEDFTVEEQTVSRWSPELSR 235