BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00017424
         (748 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts...   200   6e-93
ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264...   201   3e-91
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts...   187   2e-78
ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts...   146   4e-66
emb|CBI29694.3| unnamed protein product [Vitis vinifera]              156   3e-60
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr...   132   5e-55
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts...   132   2e-54
emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]   156   1e-53
ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852...   156   1e-53
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm...   133   7e-52
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu...   132   2e-49
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|5...   132   2e-47
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu...   114   5e-47
gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th...   121   1e-45
ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263...   179   7e-43
ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts...    92   9e-36
gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe...   122   1e-35
ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts...    94   2e-35
ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts...    97   2e-35
gb|ESW20566.1| hypothetical protein PHAVU_006G219800g [Phaseolus...    89   2e-34

>ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum
           tuberosum]
          Length = 483

 Score =  200 bits (508), Expect(2) = 6e-93
 Identities = 104/138 (75%), Positives = 107/138 (77%)
 Frame = +3

Query: 6   KEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILLKDARQNQAPAA 185
           KEKENPN                          NQRREASGRIIRSILLKDARQNQAP+A
Sbjct: 275 KEKENPN--------------------------NQRREASGRIIRSILLKDARQNQAPSA 308

Query: 186 SQQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRIRDRPDR 365
           SQQ+KH  DKDKKPPRPPSVQLFQRETN ANED VLG DLH+VHTEKQEKRTRIRDRPDR
Sbjct: 309 SQQDKHRVDKDKKPPRPPSVQLFQRETNGANEDKVLGADLHIVHTEKQEKRTRIRDRPDR 368

Query: 366 GVWTPLRRSDSLHASDES 419
           GVWTPLRRSDSLHASDES
Sbjct: 369 GVWTPLRRSDSLHASDES 386



 Score =  168 bits (425), Expect(2) = 6e-93
 Identities = 79/84 (94%), Positives = 82/84 (97%)
 Frame = +1

Query: 424 FVEGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRGMRDDGISVGEGKPL 603
           FVEGSQGETK+ LANARG EFRP+GSGRNS+SSFDNGTYKHGGRRGMRDDGISVGEGKPL
Sbjct: 400 FVEGSQGETKHGLANARGAEFRPMGSGRNSYSSFDNGTYKHGGRRGMRDDGISVGEGKPL 459

Query: 604 RRGGPSSYGTHEKQVWVQKSSSGT 675
           RRGGPSSYGTHEKQVWVQKSSSGT
Sbjct: 460 RRGGPSSYGTHEKQVWVQKSSSGT 483


>ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264766 [Solanum
           lycopersicum]
          Length = 485

 Score =  201 bits (512), Expect(2) = 3e-91
 Identities = 106/138 (76%), Positives = 107/138 (77%)
 Frame = +3

Query: 6   KEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILLKDARQNQAPAA 185
           KEKENPN                          NQRREASGRIIRSILLKDARQNQAP+A
Sbjct: 277 KEKENPN--------------------------NQRREASGRIIRSILLKDARQNQAPSA 310

Query: 186 SQQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRIRDRPDR 365
           SQQEKH  DKDKKPPRPPSVQLFQRETN ANED VLG DLHVVHTEKQEKRTRIRDRPDR
Sbjct: 311 SQQEKHRVDKDKKPPRPPSVQLFQRETNGANEDRVLGADLHVVHTEKQEKRTRIRDRPDR 370

Query: 366 GVWTPLRRSDSLHASDES 419
           GVWTPLRRSDSLHASDES
Sbjct: 371 GVWTPLRRSDSLHASDES 388



 Score =  160 bits (406), Expect(2) = 3e-91
 Identities = 76/84 (90%), Positives = 78/84 (92%)
 Frame = +1

Query: 424 FVEGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRGMRDDGISVGEGKPL 603
           FVEGS GETK+ L NAR  EFRP+GSGRNSHSSFDNGTYKHGGRRGMRDDGISVGEGKPL
Sbjct: 402 FVEGSPGETKHGLVNARVAEFRPMGSGRNSHSSFDNGTYKHGGRRGMRDDGISVGEGKPL 461

Query: 604 RRGGPSSYGTHEKQVWVQKSSSGT 675
           RRGGPSSY THEKQVWVQKSSSGT
Sbjct: 462 RRGGPSSYNTHEKQVWVQKSSSGT 485


>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
           [Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
           PREDICTED: regulator of nonsense transcripts UPF3-like
           isoform X2 [Solanum tuberosum]
           gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
           nonsense transcripts UPF3-like isoform X3 [Solanum
           tuberosum]
          Length = 508

 Score =  187 bits (474), Expect(2) = 2e-78
 Identities = 95/139 (68%), Positives = 113/139 (81%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILLKDARQNQAPA 182
           GKEKE PNVS GSL Q+NV+  +KN+ + SALKQNQR+EASGRIIRSILLKDARQNQ+  
Sbjct: 275 GKEKEGPNVSGGSLAQQNVSSALKNSPSLSALKQNQRQEASGRIIRSILLKDARQNQSAF 334

Query: 183 ASQQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRIRDRPD 362
            S Q    QDKD +PPRPPS+QLFQ++T+ ANED V+G + HVVH EKQE+R+R RDRPD
Sbjct: 335 QSDQ---IQDKDMRPPRPPSMQLFQKDTSGANEDKVVGNEKHVVHIEKQERRSRNRDRPD 391

Query: 363 RGVWTPLRRSDSLHASDES 419
           RGVW PLRR+DS  AS+ S
Sbjct: 392 RGVWAPLRRADSSQASNGS 410



 Score =  132 bits (333), Expect(2) = 2e-78
 Identities = 64/85 (75%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
 Frame = +1

Query: 424 FVEGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRGMRD-DGISVGEGKP 600
           FVEG QGE KNDL  ARG EFRPIGSGRNSHSS DNG YKHGGRRG+RD  G S+GEGKP
Sbjct: 424 FVEGGQGELKNDLPIARGTEFRPIGSGRNSHSSADNGNYKHGGRRGLRDVAGTSIGEGKP 483

Query: 601 LRRGGPSSYGTHEKQVWVQKSSSGT 675
           +++GG S+Y + EKQVWVQKSSSG+
Sbjct: 484 VKKGGTSAYSSLEKQVWVQKSSSGS 508


>ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4
           [Solanum tuberosum]
          Length = 482

 Score =  146 bits (368), Expect(2) = 4e-66
 Identities = 80/139 (57%), Positives = 93/139 (66%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILLKDARQNQAPA 182
           GKEKE PN                          NQR+EASGRIIRSILLKDARQNQ+  
Sbjct: 275 GKEKEGPN--------------------------NQRQEASGRIIRSILLKDARQNQSAF 308

Query: 183 ASQQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRIRDRPD 362
            S Q    QDKD +PPRPPS+QLFQ++T+ ANED V+G + HVVH EKQE+R+R RDRPD
Sbjct: 309 QSDQ---IQDKDMRPPRPPSMQLFQKDTSGANEDKVVGNEKHVVHIEKQERRSRNRDRPD 365

Query: 363 RGVWTPLRRSDSLHASDES 419
           RGVW PLRR+DS  AS+ S
Sbjct: 366 RGVWAPLRRADSSQASNGS 384



 Score =  132 bits (333), Expect(2) = 4e-66
 Identities = 64/85 (75%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
 Frame = +1

Query: 424 FVEGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRGMRD-DGISVGEGKP 600
           FVEG QGE KNDL  ARG EFRPIGSGRNSHSS DNG YKHGGRRG+RD  G S+GEGKP
Sbjct: 398 FVEGGQGELKNDLPIARGTEFRPIGSGRNSHSSADNGNYKHGGRRGLRDVAGTSIGEGKP 457

Query: 601 LRRGGPSSYGTHEKQVWVQKSSSGT 675
           +++GG S+Y + EKQVWVQKSSSG+
Sbjct: 458 VKKGGTSAYSSLEKQVWVQKSSSGS 482


>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  156 bits (395), Expect(2) = 3e-60
 Identities = 86/144 (59%), Positives = 108/144 (75%), Gaps = 5/144 (3%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILL-KDARQNQAP 179
           GKE+E     S  L+Q+NVT  +KN + ++A KQNQRRE SGRIIRSILL KDARQ+Q+ 
Sbjct: 279 GKERE----ISHHLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQS- 333

Query: 180 AASQQEKHSQ----DKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRI 347
           +  Q E+ SQ    +K+K+PPRPP +QL  +ETN A +D V+G D+H   +EKQ+KRTR 
Sbjct: 334 SMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRN 393

Query: 348 RDRPDRGVWTPLRRSDSLHASDES 419
           +DRPDRGVWTPLRRSD  HASDES
Sbjct: 394 KDRPDRGVWTPLRRSDGSHASDES 417



 Score =  102 bits (254), Expect(2) = 3e-60
 Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 6/89 (6%)
 Frame = +1

Query: 424 FVEGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRG----MRD-DGIS-V 585
           F EGS GE ++D++NAR GE + +GSGR  HS+ DNG++KH GRRG    ++D DG S V
Sbjct: 430 FPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIV 489

Query: 586 GEGKPLRRGGPSSYGTHEKQVWVQKSSSG 672
            EGK  +RG    YG+HEKQVWVQKSSSG
Sbjct: 490 SEGKHSKRGSAPGYGSHEKQVWVQKSSSG 518


>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
           gi|557533707|gb|ESR44825.1| hypothetical protein
           CICLE_v10000901mg [Citrus clementina]
          Length = 514

 Score =  132 bits (332), Expect(2) = 5e-55
 Identities = 78/141 (55%), Positives = 98/141 (69%), Gaps = 2/141 (1%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILL-KDARQNQAP 179
           GKE+E   VS     Q++ +  +K  I+S ALKQNQRRE SGRIIR ILL KDARQNQA 
Sbjct: 278 GKEREISQVSGSVSHQQSAS--VKTIISSPALKQNQRRENSGRIIRGILLNKDARQNQAS 335

Query: 180 AA-SQQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRIRDR 356
              S+Q+  + +KDK+PPRP  VQL  ++TN  ++D V+  DL   H+EKQE+RTR +DR
Sbjct: 336 GLHSEQQISNLEKDKRPPRPSHVQLVMKDTNGVSDDKVIVNDL---HSEKQERRTRNKDR 392

Query: 357 PDRGVWTPLRRSDSLHASDES 419
           PDR  WT LRRSD  + SDES
Sbjct: 393 PDRAAWT-LRRSDGSYQSDES 412



 Score =  109 bits (272), Expect(2) = 5e-55
 Identities = 54/86 (62%), Positives = 67/86 (77%), Gaps = 4/86 (4%)
 Frame = +1

Query: 430 EGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRG---MRDDGISV-GEGK 597
           EG+ G+ K DL+N R GE + +G GR+SHSS DNG+++H GRRG   ++DDG  V  EGK
Sbjct: 429 EGNLGDGKFDLSNMRSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTHVKDDGSPVMSEGK 488

Query: 598 PLRRGGPSSYGTHEKQVWVQKSSSGT 675
           PLRRGG S YG+HEKQVWVQKSSSG+
Sbjct: 489 PLRRGGASGYGSHEKQVWVQKSSSGS 514


>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
           sinensis]
          Length = 514

 Score =  132 bits (333), Expect(2) = 2e-54
 Identities = 78/141 (55%), Positives = 98/141 (69%), Gaps = 2/141 (1%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILL-KDARQNQAP 179
           GKE+E   VS     Q++ +  +KN I+S ALKQNQRRE SGRIIR ILL KDARQNQA 
Sbjct: 278 GKEREISQVSGSVSHQQSAS--VKNIISSPALKQNQRRENSGRIIRGILLNKDARQNQAS 335

Query: 180 AA-SQQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRIRDR 356
              S+Q+  + +KDK+PPRP  V L  ++TN  ++D V+  DL   H+EKQE+RTR +DR
Sbjct: 336 GLHSEQQISNLEKDKRPPRPSHVHLVMKDTNGVSDDKVIVNDL---HSEKQERRTRNKDR 392

Query: 357 PDRGVWTPLRRSDSLHASDES 419
           PDR  WT LRRSD  + SDES
Sbjct: 393 PDRAAWT-LRRSDGSYQSDES 412



 Score =  107 bits (266), Expect(2) = 2e-54
 Identities = 53/86 (61%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
 Frame = +1

Query: 430 EGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRG---MRDDGISV-GEGK 597
           EG+ G+ K DL+N R GE + +G GR+SHSS DNG+++H GRRG   ++DD   V  EGK
Sbjct: 429 EGNLGDGKFDLSNMRSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTHVKDDSSPVMSEGK 488

Query: 598 PLRRGGPSSYGTHEKQVWVQKSSSGT 675
           PLRRGG S YG+HEKQVWVQKSSSG+
Sbjct: 489 PLRRGGASGYGSHEKQVWVQKSSSGS 514


>emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]
          Length = 304

 Score =  156 bits (395), Expect(2) = 1e-53
 Identities = 86/144 (59%), Positives = 108/144 (75%), Gaps = 5/144 (3%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILL-KDARQNQAP 179
           GKE+E     S  L+Q+NVT  +KN + ++A KQNQRRE SGRIIRSILL KDARQ+Q+ 
Sbjct: 24  GKERE----ISHHLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQS- 78

Query: 180 AASQQEKHSQ----DKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRI 347
           +  Q E+ SQ    +K+K+PPRPP +QL  +ETN A +D V+G D+H   +EKQ+KRTR 
Sbjct: 79  SMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRN 138

Query: 348 RDRPDRGVWTPLRRSDSLHASDES 419
           +DRPDRGVWTPLRRSD  HASDES
Sbjct: 139 KDRPDRGVWTPLRRSDGSHASDES 162



 Score = 80.9 bits (198), Expect(2) = 1e-53
 Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 6/79 (7%)
 Frame = +1

Query: 424 FVEGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRG----MRD-DGIS-V 585
           F EGS GE ++D++NAR GE + +GSGR  HS+ DNG++KH GRRG    ++D DG S V
Sbjct: 175 FPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIV 234

Query: 586 GEGKPLRRGGPSSYGTHEK 642
            EGK  +RG    YG+HE+
Sbjct: 235 SEGKHSKRGSAPGYGSHEE 253


>ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852735 [Vitis vinifera]
          Length = 322

 Score =  156 bits (395), Expect(2) = 1e-53
 Identities = 86/144 (59%), Positives = 108/144 (75%), Gaps = 5/144 (3%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILL-KDARQNQAP 179
           GKE+E     S  L+Q+NVT  +KN + ++A KQNQRRE SGRIIRSILL KDARQ+Q+ 
Sbjct: 68  GKERE----ISHHLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQS- 122

Query: 180 AASQQEKHSQ----DKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRI 347
           +  Q E+ SQ    +K+K+PPRPP +QL  +ETN A +D V+G D+H   +EKQ+KRTR 
Sbjct: 123 SMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRN 182

Query: 348 RDRPDRGVWTPLRRSDSLHASDES 419
           +DRPDRGVWTPLRRSD  HASDES
Sbjct: 183 KDRPDRGVWTPLRRSDGSHASDES 206



 Score = 80.5 bits (197), Expect(2) = 1e-53
 Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
 Frame = +1

Query: 424 FVEGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRG----MRD-DGIS-V 585
           F EGS GE ++D++NAR GE + +GSGR  HS+ DNG++KH GRRG    ++D DG S V
Sbjct: 219 FPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIV 278

Query: 586 GEGKPLRRGGPSSYGTHE 639
            EGK  +RG    YG+HE
Sbjct: 279 SEGKHSKRGSAPGYGSHE 296


>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
           gi|223534215|gb|EEF35930.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 472

 Score =  133 bits (335), Expect(2) = 7e-52
 Identities = 75/133 (56%), Positives = 97/133 (72%), Gaps = 4/133 (3%)
 Frame = +3

Query: 33  SGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILL-KDARQNQAPA-ASQQEKHS 206
           SG + ++N     KN +TSSA+KQ+QRRE+SGRIIRSILL KD+RQNQ+    S+Q+  S
Sbjct: 238 SGGMSKQNAASFDKN-VTSSAIKQSQRRESSGRIIRSILLNKDSRQNQSSGFQSEQQIQS 296

Query: 207 Q--DKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRIRDRPDRGVWTP 380
              +K+K+ PRP  VQL  ++ N +++D  +G DLH    EKQEKRTR +DRPDR VWTP
Sbjct: 297 SNLEKEKRLPRPAHVQLVLKDVNGSSDDKFVGNDLHGFSGEKQEKRTRNKDRPDRVVWTP 356

Query: 381 LRRSDSLHASDES 419
           LRRSD  +ASDES
Sbjct: 357 LRRSDGSYASDES 369



 Score = 97.8 bits (242), Expect(2) = 7e-52
 Identities = 50/87 (57%), Positives = 65/87 (74%), Gaps = 5/87 (5%)
 Frame = +1

Query: 430 EGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRG----MRDDGISVGEGK 597
           +G+ G+ K D +N+R G+ + +GSGR+SHSS DNG++KH GRRG    +RD   S  EGK
Sbjct: 386 QGNLGDIKVDSSNSRSGDVKTLGSGRSSHSSLDNGSHKHFGRRGPSHTVRDADGSSLEGK 445

Query: 598 PLRR-GGPSSYGTHEKQVWVQKSSSGT 675
           P +R GG S YG+HEKQVWVQKSSSG+
Sbjct: 446 PSKRGGGASGYGSHEKQVWVQKSSSGS 472


>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
           gi|550341819|gb|ERP62848.1| hypothetical protein
           POPTR_0004s23450g [Populus trichocarpa]
          Length = 520

 Score =  132 bits (331), Expect(2) = 2e-49
 Identities = 74/143 (51%), Positives = 98/143 (68%), Gaps = 4/143 (2%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILL-KDARQNQAP 179
           GKEKE   V+     Q++++   +N I+S+ALK +QRRE SGR+IRSILL KD+R  ++ 
Sbjct: 278 GKEKEISLVTGTMSQQQSISSSDRNIISSTALK-SQRRETSGRMIRSILLNKDSRHIRSS 336

Query: 180 AAS---QQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRIR 350
                 Q +  + +K+K+PPRPP  QL  ++ N   +D V+G DLH    EKQEKRTR +
Sbjct: 337 GVHSEPQMQTSNLEKEKRPPRPPHAQLGLKDANGTPDDKVVGNDLHGFPNEKQEKRTRNK 396

Query: 351 DRPDRGVWTPLRRSDSLHASDES 419
           DRPDRGVWTPLRRSD  +ASDES
Sbjct: 397 DRPDRGVWTPLRRSDGSYASDES 419



 Score = 91.3 bits (225), Expect(2) = 2e-49
 Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
 Frame = +1

Query: 430 EGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRG----MRDDGISVGEGK 597
           +G+ G+ K D  N R GE + +GSGR +HSS DNG++KH GRRG    +RD   S  E K
Sbjct: 436 QGNHGDVKVDSLNLRSGEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDADGSTVEAK 495

Query: 598 PLRRGGPSSYGTHEKQVWVQKSS 666
             +RGG S YG+HEKQVWVQKS+
Sbjct: 496 TPKRGGSSGYGSHEKQVWVQKST 518


>ref|XP_002328787.1| predicted protein [Populus trichocarpa]
           gi|566168252|ref|XP_006385052.1| Smg-4/UPF3 family
           protein [Populus trichocarpa]
           gi|550341820|gb|ERP62849.1| Smg-4/UPF3 family protein
           [Populus trichocarpa]
          Length = 527

 Score =  132 bits (331), Expect(2) = 2e-47
 Identities = 74/143 (51%), Positives = 98/143 (68%), Gaps = 4/143 (2%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILL-KDARQNQAP 179
           GKEKE   V+     Q++++   +N I+S+ALK +QRRE SGR+IRSILL KD+R  ++ 
Sbjct: 278 GKEKEISLVTGTMSQQQSISSSDRNIISSTALK-SQRRETSGRMIRSILLNKDSRHIRSS 336

Query: 180 AAS---QQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRIR 350
                 Q +  + +K+K+PPRPP  QL  ++ N   +D V+G DLH    EKQEKRTR +
Sbjct: 337 GVHSEPQMQTSNLEKEKRPPRPPHAQLGLKDANGTPDDKVVGNDLHGFPNEKQEKRTRNK 396

Query: 351 DRPDRGVWTPLRRSDSLHASDES 419
           DRPDRGVWTPLRRSD  +ASDES
Sbjct: 397 DRPDRGVWTPLRRSDGSYASDES 419



 Score = 84.3 bits (207), Expect(2) = 2e-47
 Identities = 45/90 (50%), Positives = 57/90 (63%), Gaps = 11/90 (12%)
 Frame = +1

Query: 430 EGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRG----MRDDGISVGEGK 597
           +G+ G+ K D  N R GE + +GSGR +HSS DNG++KH GRRG    +RD   S  E K
Sbjct: 436 QGNHGDVKVDSLNLRSGEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDADGSTVEAK 495

Query: 598 PLRRGGPSSYGTHE-------KQVWVQKSS 666
             +RGG S YG+HE       KQVWVQKS+
Sbjct: 496 TPKRGGSSGYGSHEVCSLDSQKQVWVQKST 525


>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
           gi|550312328|gb|ERP48419.1| hypothetical protein
           POPTR_0022s00460g [Populus trichocarpa]
          Length = 511

 Score =  114 bits (284), Expect(2) = 5e-47
 Identities = 69/143 (48%), Positives = 96/143 (67%), Gaps = 4/143 (2%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILL-KDARQNQAP 179
           GKEKE         +Q++++P  +N I+S+ALK +QR E+SGR+I+SILL KD+R+ Q+ 
Sbjct: 277 GKEKEIS-------LQQSISPSDRNIISSTALK-SQRHESSGRVIKSILLNKDSRRIQSS 328

Query: 180 AAS---QQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRIR 350
                 Q +  + +KDK+PPRPP   L  ++ N   +D V+G DLH    EKQE+RTR +
Sbjct: 329 GVQSEPQMQTSNLEKDKRPPRPPHA-LVLKDANGTPDDKVVGNDLHGFPNEKQERRTRNK 387

Query: 351 DRPDRGVWTPLRRSDSLHASDES 419
           DRPDR VWT LRRS+  +ASDES
Sbjct: 388 DRPDRVVWT-LRRSEGSYASDES 409



 Score =  101 bits (251), Expect(2) = 5e-47
 Identities = 49/84 (58%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
 Frame = +1

Query: 436 SQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRG----MRDDGISVGEGKPL 603
           + G+ K D  N R GE + +GSGR++HSS DNG++KH GRRG    +RD   S  EGK L
Sbjct: 428 NHGDVKADTLNLRSGEVKALGSGRSNHSSLDNGSHKHSGRRGPPHPVRDADGSTVEGKSL 487

Query: 604 RRGGPSSYGTHEKQVWVQKSSSGT 675
           +RGG S YG+HEKQVWVQKSSSG+
Sbjct: 488 KRGGASGYGSHEKQVWVQKSSSGS 511


>gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
          Length = 514

 Score =  121 bits (304), Expect(2) = 1e-45
 Identities = 73/143 (51%), Positives = 95/143 (66%), Gaps = 4/143 (2%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILL-KDARQNQAP 179
           GKEKE   V+   L Q+NVT  IK  + S+  KQN RRE  GR+IR ILL KDARQNQ+ 
Sbjct: 279 GKEKEISPVAGNVLHQQNVTSPIKTILGSTPTKQNSRRE--GRMIRGILLNKDARQNQSS 336

Query: 180 AASQQEK---HSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRIR 350
               +++    + +KD++PPR     L  ++TN A++D V+G DLH   +EK E+R R +
Sbjct: 337 GVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTNTASDDKVVGNDLH--GSEKPERRCRNK 394

Query: 351 DRPDRGVWTPLRRSDSLHASDES 419
           DRPDRGVWT LRRSD  +ASDES
Sbjct: 395 DRPDRGVWT-LRRSDGSYASDES 416



 Score = 89.0 bits (219), Expect(2) = 1e-45
 Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
 Frame = +1

Query: 427 VEGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTY-KHGGRRGMRDDGISV-GEGKP 600
           +EG+ G+TK DL+N R  + + +GSGRNS  S DNG++ KH  RRG   DG SV  +GKP
Sbjct: 432 LEGTYGDTKVDLSNVRSVQVKTVGSGRNS--SLDNGSHNKHVSRRGAVADGSSVMSDGKP 489

Query: 601 LRRGGPSSYGTHEKQVWVQKSSSGT 675
            +RG  + YG+HEKQVWVQKSSSG+
Sbjct: 490 GKRGCAAGYGSHEKQVWVQKSSSGS 514


>ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263168 [Solanum
           lycopersicum]
          Length = 438

 Score =  179 bits (455), Expect = 7e-43
 Identities = 91/139 (65%), Positives = 110/139 (79%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILLKDARQNQAPA 182
           GKEKE+PNVS GSL Q+NV+  +KN+ + SALK NQ +E  GRIIRSILLKDARQNQ+  
Sbjct: 275 GKEKESPNVSGGSLAQQNVSSALKNSPSLSALKLNQHQEVGGRIIRSILLKDARQNQSAF 334

Query: 183 ASQQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRIRDRPD 362
            S Q    QDKD +PPRPPS+QLFQ++T+ ANED V+G + HVVH EKQE+R+R RDRPD
Sbjct: 335 QSDQ---IQDKDMRPPRPPSMQLFQKDTSGANEDKVVGNEKHVVHIEKQERRSRNRDRPD 391

Query: 363 RGVWTPLRRSDSLHASDES 419
           RGVW PLRR+DS  AS+ S
Sbjct: 392 RGVWAPLRRADSSQASNGS 410


>ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
           [Glycine max] gi|571524272|ref|XP_006598795.1|
           PREDICTED: regulator of nonsense transcripts UPF3-like
           isoform X2 [Glycine max]
          Length = 512

 Score = 92.0 bits (227), Expect(2) = 9e-36
 Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 6/131 (4%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQE--NVTPIIKNTITSSALKQNQRREASGRIIRSIL----LKDAR 164
           GKE+E   VS    + +  NVT   K  + S+ LKQ+QR E SGRIIRSIL    L+ ++
Sbjct: 275 GKEREIITVSDLDSMSQHHNVTSSAKMIVGSTVLKQSQRHEGSGRIIRSILSKKELRQSQ 334

Query: 165 QNQAPAASQQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTR 344
            ++A +  Q +  + +K+K+PPRP  VQL  + +N   E+ +   D H V +E+QE+  R
Sbjct: 335 YSRALSEQQIQTSNLEKEKQPPRPLHVQLILKGSNGTPENKIGVHDSH-VSSERQERHVR 393

Query: 345 IRDRPDRGVWT 377
            +DRPDRGVWT
Sbjct: 394 HKDRPDRGVWT 404



 Score = 85.5 bits (210), Expect(2) = 9e-36
 Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
 Frame = +1

Query: 427 VEGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRG----MRD-DGISVG- 588
           +EGS  + K+D  NAR GE + +GS R SHSS +NG  KH GRRG    ++D DG SV  
Sbjct: 425 LEGSHADLKHDTPNARSGEVKSLGSVRTSHSS-ENGFNKHFGRRGPSHGVKDVDGYSVSS 483

Query: 589 EGKPLRRGGPSSYGTHEKQVWVQKSSSGT 675
           EGK  RR   S+YG++EKQVWVQK+SSGT
Sbjct: 484 EGKHPRRSSTSAYGSNEKQVWVQKASSGT 512


>gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
          Length = 485

 Score =  122 bits (306), Expect(2) = 1e-35
 Identities = 71/143 (49%), Positives = 96/143 (67%), Gaps = 4/143 (2%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQENVTPIIKNTITSSALKQNQRREASGRIIRSILL-KDARQNQAP 179
           GKE+E  +V +    Q++ +   KN   + ALKQN RR+ +GRIIR ILL KDARQ+Q+ 
Sbjct: 279 GKEREITHVPANMSQQQSSSA--KNMGGTIALKQNLRRQENGRIIRGILLNKDARQSQSS 336

Query: 180 ---AASQQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTRIR 350
              +A Q +  + D+DK+PPR   VQL  ++TN A + N++G DLH + +EKQEKR R +
Sbjct: 337 GIYSAQQIQTSNSDRDKRPPRSQHVQLILKDTNGAPDYNIVGNDLHGICSEKQEKRIRNK 396

Query: 351 DRPDRGVWTPLRRSDSLHASDES 419
           +RPDR VWTPL R D   ASDES
Sbjct: 397 ERPDRVVWTPLNRLDGSSASDES 419



 Score = 54.3 bits (129), Expect(2) = 1e-35
 Identities = 35/63 (55%), Positives = 43/63 (68%), Gaps = 8/63 (12%)
 Frame = +1

Query: 511 SHSSFDN--GTYKHGGRRG----MRD-DGISV-GEGKPLRRGGPSSYGTHEKQVWVQKSS 666
           +HS  D+  G +KH GRRG    ++D DG  V GEGK  +RG    YG+HEKQVWVQKSS
Sbjct: 427 AHSLLDSSEGCHKHHGRRGTTHGVKDLDGSPVAGEGKHSKRG----YGSHEKQVWVQKSS 482

Query: 667 SGT 675
           SG+
Sbjct: 483 SGS 485


>ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
           [Glycine max] gi|571493781|ref|XP_006592655.1|
           PREDICTED: regulator of nonsense transcripts UPF3-like
           isoform X2 [Glycine max]
          Length = 514

 Score = 93.6 bits (231), Expect(2) = 2e-35
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 6/131 (4%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQE--NVTPIIKNTITSSALKQNQRREASGRIIRSIL-LKDARQNQ 173
           GKE+E   VS    + +  NVT   K  + S+ LKQ+QR E SGRIIRSIL  K+  Q+Q
Sbjct: 277 GKEREIITVSDLDSMSQHHNVTSSAKTVVGSTVLKQSQRHEGSGRIIRSILSKKELHQSQ 336

Query: 174 APAASQQEK---HSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTR 344
           +  A  ++K    + +K+K+PPRP  VQL  + +N   E+ +   D H V +E+QE+  R
Sbjct: 337 SSRALSEQKILTSNLEKEKQPPRPLHVQLILKGSNGTPENKIGVHDSH-VSSERQERHVR 395

Query: 345 IRDRPDRGVWT 377
            +DRPDRGVWT
Sbjct: 396 HKDRPDRGVWT 406



 Score = 82.8 bits (203), Expect(2) = 2e-35
 Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
 Frame = +1

Query: 427 VEGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRG----MRD-DGISVG- 588
           +EGSQ + K+D+ NAR  E +  GS R SHSS +NG  KH GRRG    ++D DG SV  
Sbjct: 427 LEGSQADLKHDMPNARSVEVKSFGSVRTSHSS-ENGFNKHFGRRGPSYGVKDVDGYSVSS 485

Query: 589 EGKPLRRGGPSSYGTHEKQVWVQKSSSGT 675
           EGK  RR   S+YG++EKQVWVQK+SSG+
Sbjct: 486 EGKHPRRSSTSAYGSNEKQVWVQKASSGS 514


>ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
           [Cicer arietinum] gi|502076758|ref|XP_004485449.1|
           PREDICTED: regulator of nonsense transcripts UPF3-like
           isoform X3 [Cicer arietinum]
           gi|502076762|ref|XP_004485450.1| PREDICTED: regulator of
           nonsense transcripts UPF3-like isoform X4 [Cicer
           arietinum]
          Length = 510

 Score = 97.1 bits (240), Expect(2) = 2e-35
 Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 6/131 (4%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQEN--VTPIIKNTITSSALKQNQRREASGRIIRSILL-KDARQNQ 173
           GKE+E    S    + ++  +T   K  + S+ALKQNQR E SGRII+SIL  KD RQNQ
Sbjct: 273 GKEREIITASDSDSMSQHHSITSSAKTILNSTALKQNQRHEGSGRIIKSILSNKDLRQNQ 332

Query: 174 APAA---SQQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTR 344
           +  A    Q +  + +K+K+P RP  VQL  + T+ A E+ +    LH V +E+QE+R R
Sbjct: 333 SSRAYSERQLQTSNLEKEKQPTRPLHVQLILKGTDGAPENRITVHGLH-VSSERQERRFR 391

Query: 345 IRDRPDRGVWT 377
            +DRPDRG+WT
Sbjct: 392 QKDRPDRGIWT 402



 Score = 79.3 bits (194), Expect(2) = 2e-35
 Identities = 48/89 (53%), Positives = 60/89 (67%), Gaps = 6/89 (6%)
 Frame = +1

Query: 427 VEGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRG----MRD-DGISVG- 588
           +EG   E K+D  +AR GE +  GS R SHSS +NG  KH GRRG    ++D DG SV  
Sbjct: 423 LEGGHAELKHDTRSARSGEVKSFGSLRASHSS-ENGFNKHFGRRGPIHGVKDVDGYSVSS 481

Query: 589 EGKPLRRGGPSSYGTHEKQVWVQKSSSGT 675
           EGK  R+   S+YG++EKQVWVQK+SSGT
Sbjct: 482 EGKHPRKPSSSAYGSNEKQVWVQKASSGT 510


>gb|ESW20566.1| hypothetical protein PHAVU_006G219800g [Phaseolus vulgaris]
           gi|561021796|gb|ESW20567.1| hypothetical protein
           PHAVU_006G219800g [Phaseolus vulgaris]
          Length = 513

 Score = 88.6 bits (218), Expect(2) = 2e-34
 Identities = 57/131 (43%), Positives = 79/131 (60%), Gaps = 6/131 (4%)
 Frame = +3

Query: 3   GKEKENPNVSSGSLIQE--NVTPIIKNTITSSALKQNQRREASGRIIRSIL-LKDARQNQ 173
           GKE+E   VS    + +  NV    K  + ++ LKQNQR+E SGRIIRSIL  K+ RQ+Q
Sbjct: 276 GKEREIIAVSDLDSMSQHHNVISSAKEIVGATVLKQNQRQEGSGRIIRSILSKKELRQSQ 335

Query: 174 APAA---SQQEKHSQDKDKKPPRPPSVQLFQRETNEANEDNVLGTDLHVVHTEKQEKRTR 344
           +  A    Q +  + +KDK+ PRP  VQL  +  N   ++ +   D H V +E+QE+  R
Sbjct: 336 SSRALSEQQIQTSNLEKDKQSPRPIQVQLILKGMNGTPDNKIGVLDSH-VFSERQERHIR 394

Query: 345 IRDRPDRGVWT 377
            +DRPDRGVWT
Sbjct: 395 HKDRPDRGVWT 405



 Score = 84.7 bits (208), Expect(2) = 2e-34
 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
 Frame = +1

Query: 427 VEGSQGETKNDLANARGGEFRPIGSGRNSHSSFDNGTYKHGGRRG----MRD-DGISVG- 588
           +EGS  + K+D+ N R GE + +G  R SHSS +NG  KH GRRG    ++D DG SV  
Sbjct: 426 LEGSHADLKHDMPNTRSGEVKSLGGVRTSHSS-ENGFNKHFGRRGPTHGVKDVDGYSVSS 484

Query: 589 EGKPLRRGGPSSYGTHEKQVWVQKSSSGT 675
           EGK  RR G ++YG++EKQVWVQK+SSGT
Sbjct: 485 EGKHPRRSGTTAYGSNEKQVWVQKASSGT 513