BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00017390
         (1277 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...   134   3e-79
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...   134   7e-79
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]           136   2e-75
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]         131   2e-74
gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum]    128   5e-66
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581...   109   4e-58
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]     108   9e-50
emb|CAA73042.1| polyprotein [Ananas comosus]                          104   2e-49
gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobrom...   114   7e-47
emb|CAH66048.1| OSIGBa0131F24.2 [Oryza sativa Indica Group]            97   9e-47
gb|AAT81665.1| putative retrotransposon protein [Oryza sativa Ja...    97   1e-46
gb|AAT81698.1| putative retrotransposon protein, 5'-partial [Ory...    97   1e-46
gb|AAM00956.1|AC021892_20 Putative polyprotein [Oryza sativa Jap...    96   1e-46
gb|AAV31273.1| putative polyprotein [Oryza sativa Japonica Group...    99   2e-46
gb|ABA92233.1| retrotransposon protein, putative, Ty3-gypsy subc...    99   2e-46
gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao]    110   4e-46
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana...   101   4e-46
gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subc...   100   5e-46
dbj|BAH79971.1| hypothetical protein [Oryza sativa Indica Group]       97   9e-46
emb|CAE04932.2| OSJNBa0017P10.9 [Oryza sativa Japonica Group]          97   1e-45

>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score =  134 bits (338), Expect(3) = 3e-79
 Identities = 73/138 (52%), Positives = 90/138 (65%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQ E T  T++D+ RACV+DFK N DD  PLIEFAYNNSY  SI++APYE LYGRRC
Sbjct: 1343 QTDGQAERTIQTLEDMLRACVIDFKSNWDDHLPLIEFAYNNSYHSSIQMAPYEALYGRRC 1402

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              PI WFEV E   +  D +H +      +  + ++      K  +DVRRR L+  VDD 
Sbjct: 1403 RSPIGWFEVGEARLIGPDLVHQAMEKVKVIQER-LKTAQSRQKSYTDVRRRALEFEVDDW 1461

Query: 54   AFLKVSLMKGVTRFERKG 1
             +LKVS MKGV RF +KG
Sbjct: 1462 VYLKVSPMKGVMRFGKKG 1479



 Score =  117 bits (292), Expect(3) = 3e-79
 Identities = 66/123 (53%), Positives = 86/123 (69%), Gaps = 3/123 (2%)
 Frame = -2

Query: 760  KIYHVLKDFI--SGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  L++F   +GMK + + + +  C NCQ VK EHQ PGG  QNI +P  KWEMINM 
Sbjct: 1194 KMYRDLREFYWWNGMK-KGIAEFVAKCPNCQQVKVEHQRPGGLAQNIELPEWKWEMINMD 1252

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPL-VY 410
            FIT LP S ++H+SI VIVD++TK AH  PVKTT+S EDY KLY++E + L   VP+ + 
Sbjct: 1253 FITGLPRSRRQHDSIWVIVDRMTKSAHFLPVKTTHSAEDYAKLYIQEIVRL-HGVPISII 1311

Query: 409  SDR 401
            SDR
Sbjct: 1312 SDR 1314



 Score = 93.6 bits (231), Expect(3) = 3e-79
 Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSH----DPWEFYPT*KKIKQLW*RXXXXXXXX 1030
            R W +L   YD+ ILY+ GK NV  D+LS              +++ +   R        
Sbjct: 1045 RRWLELLKDYDLSILYHPGKANVVADSLSRLSMGSTTHIEEGRRELAKDMHRLACLGVRF 1104

Query: 1029 XSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDDSALRYQG 850
              + E  I      ESSL+++VKE Q   P LL+L+  + K + + F+Q G D  LRYQG
Sbjct: 1105 TDSTEGGIAVTSKAESSLMSEVKEKQDQDPILLELKANVQKQRVLAFEQ-GGDGVLRYQG 1163

Query: 849  RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
            RLCV  +DGL ER++ EA SSRYS+H GSTK
Sbjct: 1164 RLCVPMVDGLQERVMEEAHSSRYSVHPGSTK 1194


>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score =  134 bits (338), Expect(3) = 7e-79
 Identities = 73/138 (52%), Positives = 90/138 (65%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQ E T  T++D+ RACV+DFK N DD  PLIEFAYNNSY  SI++APYE LYGRRC
Sbjct: 1337 QTDGQAERTIQTLEDMLRACVIDFKSNWDDHLPLIEFAYNNSYHSSIQMAPYEALYGRRC 1396

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              PI WFEV E   +  D +H +      +  + ++      K  +DVRRR L+  VDD 
Sbjct: 1397 RSPIGWFEVGEARLIGPDLVHQAMEKVKVIQER-LKTAQSRQKSYTDVRRRALEFEVDDW 1455

Query: 54   AFLKVSLMKGVTRFERKG 1
             +LKVS MKGV RF +KG
Sbjct: 1456 VYLKVSPMKGVMRFGKKG 1473



 Score =  115 bits (289), Expect(3) = 7e-79
 Identities = 65/123 (52%), Positives = 86/123 (69%), Gaps = 3/123 (2%)
 Frame = -2

Query: 760  KIYHVLKDFI--SGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  L++F   +GMK + + + +  C NCQ VK EHQ PGG  QNI +P  KWEMINM 
Sbjct: 1188 KMYRDLREFYWWNGMK-KGIAEFVAKCPNCQQVKVEHQRPGGLAQNIELPEWKWEMINMD 1246

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPL-VY 410
            FIT LP S ++H+SI VIVD++TK AH  PV+TT+S EDY KLY++E + L   VP+ + 
Sbjct: 1247 FITGLPRSRRQHDSIWVIVDRMTKSAHFLPVRTTHSAEDYAKLYIQEIVRL-HGVPISII 1305

Query: 409  SDR 401
            SDR
Sbjct: 1306 SDR 1308



 Score = 93.6 bits (231), Expect(3) = 7e-79
 Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSH----DPWEFYPT*KKIKQLW*RXXXXXXXX 1030
            R W +L   YD+ ILY+ GK NV  D+LS              +++ +   R        
Sbjct: 1039 RRWLELLKDYDLSILYHPGKANVVADSLSRLSMGSTTHIEEGRRELAKDMHRLACLGVRF 1098

Query: 1029 XSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDDSALRYQG 850
              + E  I      ESSL+++VKE Q   P LL+L+  + K + + F+Q G D  LRYQG
Sbjct: 1099 TDSTEGGIAVTSKAESSLMSEVKEKQDQDPILLELKANVQKQRVLAFEQ-GGDGVLRYQG 1157

Query: 849  RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
            RLCV  +DGL ER++ EA SSRYS+H GSTK
Sbjct: 1158 RLCVPMVDGLQERVMEEAHSSRYSVHPGSTK 1188


>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
          Length = 1554

 Score =  136 bits (343), Expect(3) = 2e-75
 Identities = 75/138 (54%), Positives = 90/138 (65%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQ E T HT++D+ RACV+DFK N DD  PLIEFAYNNSY  SI +APYE LYGRRC
Sbjct: 1343 QTDGQAERTIHTLEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHSSIHMAPYEALYGRRC 1402

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
            I PI WFEV E   +  D +H +      +  ++    S+    I DVR R L+  VDD 
Sbjct: 1403 ISPIGWFEVGEAQLIGPDLVHQAMEKVKVIQERLKTAQSRQKSYI-DVRTRALEFEVDDW 1461

Query: 54   AFLKVSLMKGVTRFERKG 1
             +LKVS MKGV RF +KG
Sbjct: 1462 VYLKVSPMKGVMRFGKKG 1479



 Score =  112 bits (279), Expect(3) = 2e-75
 Identities = 64/123 (52%), Positives = 83/123 (67%), Gaps = 3/123 (2%)
 Frame = -2

Query: 760  KIYHVLKDFI--SGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+YH L++    +GMK + + + +  C NCQ VK EHQ P G  Q I +P  KWEMINM 
Sbjct: 1194 KMYHDLREVYWWNGMK-KGIAEFVAKCPNCQQVKVEHQRPVGLAQRIKLPEWKWEMINMD 1252

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPL-VY 410
            FIT LP S ++H+SI VIVDQ+TK AH  PV+TTN  EDY KLYV+E + L   +P+ + 
Sbjct: 1253 FITGLPKSHRQHDSIWVIVDQMTKSAHFLPVRTTNIAEDYAKLYVQEIVRL-HGIPISII 1311

Query: 409  SDR 401
            SDR
Sbjct: 1312 SDR 1314



 Score = 84.3 bits (207), Expect(3) = 2e-75
 Identities = 44/77 (57%), Positives = 54/77 (70%)
 Frame = -3

Query: 987  ESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDDSALRYQGRLCVIDLDGLLERI 808
            ESSLV++VKE Q   P  L+ +  + K + + F+Q G D  LRYQGRLCV  +DGL ERI
Sbjct: 1119 ESSLVSEVKEKQDQDPIFLEFKANVQKQRVLAFEQ-GGDGVLRYQGRLCVPMVDGLQERI 1177

Query: 807  IAEACSSRYSIHSGSTK 757
            + EA SSRYSIH GSTK
Sbjct: 1178 MEEAHSSRYSIHPGSTK 1194


>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
          Length = 4543

 Score =  131 bits (330), Expect(3) = 2e-74
 Identities = 72/138 (52%), Positives = 90/138 (65%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQ E+T   ++D+ RACV+DFK N DD  PLIEFAYNNSY  SI++APYE LYGRRC
Sbjct: 1092 QTDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHPSIQMAPYEALYGRRC 1151

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              PI WFEV E   +  D +H +      +  + ++      K  +DVRRR L+  VDD 
Sbjct: 1152 RSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKER-LKTAQSRQKSYTDVRRRALEFEVDDW 1210

Query: 54   AFLKVSLMKGVTRFERKG 1
             +LKVS MKGV RF +KG
Sbjct: 1211 VYLKVSPMKGVMRFGKKG 1228



 Score =  131 bits (330), Expect(3) = 2e-74
 Identities = 72/138 (52%), Positives = 90/138 (65%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQ E+T   ++D+ RACV+DFK N DD  PLIEFAYNNSY  SI++APYE LYGRRC
Sbjct: 2602 QTDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHPSIQMAPYEALYGRRC 2661

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              PI WFEV E   +  D +H +      +  + ++      K  +DVRRR L+  VDD 
Sbjct: 2662 RSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKER-LKTAQSRQKSYTDVRRRALEFEVDDW 2720

Query: 54   AFLKVSLMKGVTRFERKG 1
             +LKVS MKGV RF +KG
Sbjct: 2721 VYLKVSPMKGVMRFGKKG 2738



 Score =  131 bits (330), Expect(3) = 2e-74
 Identities = 72/138 (52%), Positives = 90/138 (65%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQ E+T   ++D+ RACV+DFK N DD  PLIEFAYNNSY  SI++APYE LYGRRC
Sbjct: 4112 QTDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHPSIQMAPYEALYGRRC 4171

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              PI WFEV E   +  D +H +      +  + ++      K  +DVRRR L+  VDD 
Sbjct: 4172 RSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKER-LKTAQSRQKSYTDVRRRALEFEVDDW 4230

Query: 54   AFLKVSLMKGVTRFERKG 1
             +LKVS MKGV RF +KG
Sbjct: 4231 VYLKVSPMKGVMRFGKKG 4248



 Score =  110 bits (274), Expect(3) = 2e-74
 Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
 Frame = -2

Query: 760  KIYHVLKDFI--SGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  L++    +GMK + + + +  C NCQ VK EHQ PGG  Q I +P  KWEMINM 
Sbjct: 970  KMYRDLREVYWWNGMK-KGIAEFVAKCPNCQQVKVEHQRPGGLAQRIELPEWKWEMINMD 1028

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRE 446
            FIT LP S ++H+SI VIVD++TK AH  PVKTTN+ EDY KLYV+E
Sbjct: 1029 FITGLPRSRRQHDSIWVIVDRMTKSAHFLPVKTTNTTEDYAKLYVQE 1075



 Score =  110 bits (274), Expect(3) = 2e-74
 Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
 Frame = -2

Query: 760  KIYHVLKDFI--SGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  L++    +GMK + + + +  C NCQ VK EHQ PGG  Q I +P  KWEMINM 
Sbjct: 2480 KMYRDLREVYWWNGMK-KGIAEFVAKCPNCQQVKVEHQRPGGLAQRIELPEWKWEMINMD 2538

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRE 446
            FIT LP S ++H+SI VIVD++TK AH  PVKTTN+ EDY KLYV+E
Sbjct: 2539 FITGLPRSRRQHDSIWVIVDRMTKSAHFLPVKTTNTTEDYAKLYVQE 2585



 Score =  110 bits (274), Expect(3) = 2e-74
 Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
 Frame = -2

Query: 760  KIYHVLKDFI--SGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  L++    +GMK + + + +  C NCQ VK EHQ PGG  Q I +P  KWEMINM 
Sbjct: 3990 KMYRDLREVYWWNGMK-KGIAEFVAKCPNCQQVKVEHQRPGGLAQRIELPEWKWEMINMD 4048

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRE 446
            FIT LP S ++H+SI VIVD++TK AH  PVKTTN+ EDY KLYV+E
Sbjct: 4049 FITGLPRSRRQHDSIWVIVDRMTKSAHFLPVKTTNTTEDYAKLYVQE 4095



 Score = 87.4 bits (215), Expect(3) = 2e-74
 Identities = 60/151 (39%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
 Frame = -3

Query: 1191 RIWFQLYYD--VCILYYLGKVNVAVDALSH----DPWEFYPT*KKIKQLW*RXXXXXXXX 1030
            R W +L  D  + ILY+ GK NV  D+LS              +++ +   R        
Sbjct: 821  RRWLELLKDYVLSILYHPGKANVVADSLSRLSMGSTAHIEEGRRELTKDVHRLACLGVRF 880

Query: 1029 XSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDDSALRYQG 850
              + +  I      ESSLV +VK+ Q   P LL+L+  + K + + F+Q G D ALRYQG
Sbjct: 881  TDSAKGGIAVANRAESSLVLEVKKKQDQDPILLELKANVQKQRVLAFEQ-GGDGALRYQG 939

Query: 849  RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
            RLCV  +DGL E+I+ EA SSRYS+H GSTK
Sbjct: 940  RLCVPMVDGLQEKIMEEAHSSRYSVHPGSTK 970



 Score = 87.4 bits (215), Expect(3) = 2e-74
 Identities = 60/151 (39%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
 Frame = -3

Query: 1191 RIWFQLYYD--VCILYYLGKVNVAVDALSH----DPWEFYPT*KKIKQLW*RXXXXXXXX 1030
            R W +L  D  + ILY+ GK NV  D+LS              +++ +   R        
Sbjct: 2331 RRWLELLKDYVLSILYHPGKANVVADSLSRLSMGSTAHIEEGRRELTKDVHRLACLGVRF 2390

Query: 1029 XSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDDSALRYQG 850
              + +  I      ESSLV +VK+ Q   P LL+L+  + K + + F+Q G D ALRYQG
Sbjct: 2391 TDSAKGGIAVANRAESSLVLEVKKKQDQDPILLELKANVQKQRVLAFEQ-GGDGALRYQG 2449

Query: 849  RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
            RLCV  +DGL E+I+ EA SSRYS+H GSTK
Sbjct: 2450 RLCVPMVDGLQEKIMEEAHSSRYSVHPGSTK 2480



 Score = 87.4 bits (215), Expect(3) = 2e-74
 Identities = 60/151 (39%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
 Frame = -3

Query: 1191 RIWFQLYYD--VCILYYLGKVNVAVDALSH----DPWEFYPT*KKIKQLW*RXXXXXXXX 1030
            R W +L  D  + ILY+ GK NV  D+LS              +++ +   R        
Sbjct: 3841 RRWLELLKDYVLSILYHPGKANVVADSLSRLSMGSTAHIEEGRRELTKDVHRLACLGVRF 3900

Query: 1029 XSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDDSALRYQG 850
              + +  I      ESSLV +VK+ Q   P LL+L+  + K + + F+Q G D ALRYQG
Sbjct: 3901 TDSAKGGIAVANRAESSLVLEVKKKQDQDPILLELKANVQKQRVLAFEQ-GGDGALRYQG 3959

Query: 849  RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
            RLCV  +DGL E+I+ EA SSRYS+H GSTK
Sbjct: 3960 RLCVPMVDGLQEKIMEEAHSSRYSVHPGSTK 3990


>gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum]
          Length = 1487

 Score =  128 bits (321), Expect(3) = 5e-66
 Identities = 73/140 (52%), Positives = 91/140 (65%), Gaps = 4/140 (2%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQ E T  T++D+ RACV+DFK N DD  PLIEFAYNNSY  SI++APYE LYGRRC
Sbjct: 1224 QTDGQAERTIQTLEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHSSIQMAPYEALYGRRC 1283

Query: 228  IFPIRWFEVCEQNYLDRLHPSGHGES*VDSKVVENISKS----PKVISDVRRRDLKVNVD 61
              PI WFEV E   +    P+   ++    KV++   K+     K  +DVRRR L+  VD
Sbjct: 1284 RSPIGWFEVGEAGLIG---PNLVHQAMEKVKVIQERLKTAQSRQKSYTDVRRRALEFEVD 1340

Query: 60   DGAFLKVSLMKGVTRFERKG 1
            +  +LKVS MKGV R  +KG
Sbjct: 1341 NWVYLKVSPMKGVMRVGKKG 1360



 Score =  107 bits (266), Expect(3) = 5e-66
 Identities = 59/113 (52%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
 Frame = -2

Query: 766  FYKIYHVLKDFI--SGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMIN 593
            F K+Y  L++    +GMK + + + +  C NCQ VK EHQ  GG  Q I +   KWEMIN
Sbjct: 1077 FTKMYRDLREVYWWNGMK-KGIAEFVAKCPNCQQVKVEHQRLGGLAQRIELLELKWEMIN 1135

Query: 592  MGFITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL 434
            M FIT LP S ++H+SI VIVD++TK AH  PVKTTNS EDY KLY++E + L
Sbjct: 1136 MDFITGLPRSRRQHDSIWVIVDRMTKSAHFLPVKTTNSAEDYAKLYIQEVVRL 1188



 Score = 65.9 bits (159), Expect(3) = 5e-66
 Identities = 53/151 (35%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSH----DPWEFYPT*KKIKQLW*RXXXXXXXX 1030
            R W +L   YD+ ILY+ GK NV  D+LS     +        +++ +   R        
Sbjct: 945  RRWLELLKDYDLSILYHPGKANVVADSLSRLSMGNTTHIEEEKRELAKDVHRLACLGVRL 1004

Query: 1029 XSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDDSALRYQG 850
              + +  I      ESSLV++                 + K + + F+Q G D  LRYQG
Sbjct: 1005 IDSAKGGISVTNEAESSLVSEAN---------------VQKQRVLAFEQ-GGDGVLRYQG 1048

Query: 849  RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
            RLCV  +DGL +RI+ EA SSRYSIH G TK
Sbjct: 1049 RLCVPMVDGLQKRIMEEAHSSRYSIHPGFTK 1079


>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
          Length = 1946

 Score =  109 bits (272), Expect(3) = 4e-58
 Identities = 66/140 (47%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQ E T  T++D+ RACVL+ K + +D  PLIEF+YNNSY  SI +AP+E LYGRRC
Sbjct: 1688 QTDGQAERTIQTLEDMLRACVLELKGSWEDHLPLIEFSYNNSYHSSIGMAPFEALYGRRC 1747

Query: 228  IFPIRWFEVCEQNYLDRLHPSGHGES*VDSKVVENISKSP----KVISDVRRRDLKVNVD 61
               +  FEV E   +  L P    E+  + +++    K      K  +DVRRR L+  V 
Sbjct: 1748 RSSVGLFEVGE---VALLGPDLVMEALEEVRMIRERLKMAQSRRKSYADVRRRALEFRVG 1804

Query: 60   DGAFLKVSLMKGVTRFERKG 1
            D  +LKVS MKGV RF +KG
Sbjct: 1805 DWVYLKVSPMKGVVRFGKKG 1824



 Score = 97.8 bits (242), Expect(3) = 4e-58
 Identities = 57/123 (46%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
 Frame = -2

Query: 760  KIYHVLKDFI--SGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  L+D     GMK + + + +  C +CQ VK EHQ PGG TQ+I IP  KWE INM 
Sbjct: 1539 KMYRDLRDVYWWGGMK-KDIAKFVSGCHSCQQVKAEHQRPGGLTQDIEIPTWKWEEINMD 1597

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPL-VY 410
            F+  LP + +   SI V+VD++TK AH  PVKTT   EDY +LY+ + + L   +PL + 
Sbjct: 1598 FVVGLPKTRKGFGSIWVVVDRMTKSAHFLPVKTTYGAEDYARLYIHDLVRL-HGIPLSII 1656

Query: 409  SDR 401
            SDR
Sbjct: 1657 SDR 1659



 Score = 67.4 bits (163), Expect(3) = 4e-58
 Identities = 56/158 (35%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSHDPW-----------EFYPT*KKIKQLW*RX 1051
            R W +    YD+ + Y+ GK NV  DALS               E      ++ +L  R 
Sbjct: 1390 RRWLEFLKDYDMSVHYHPGKANVVADALSRVSMGSLAHVDIGDREMAREVHRLARLGVRL 1449

Query: 1050 XXXXXXXXSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDD 871
                      ++          SSLV +V   Q     LL+L+  + + K   F Q G D
Sbjct: 1450 EEVGNGGVVVVDG-------ARSSLVDEVIAKQDLDSSLLELKALVKEGKVEVFSQ-GGD 1501

Query: 870  SALRYQGRLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
             ALRYQGRLCV  +DGL E+I+ EA +S YSIH GSTK
Sbjct: 1502 GALRYQGRLCVPCVDGLREKILEEAHNSSYSIHPGSTK 1539


>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score =  108 bits (271), Expect(3) = 9e-50
 Identities = 63/145 (43%), Positives = 82/145 (56%), Gaps = 9/145 (6%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQ+E T   ++D+ RACV+DF    +   PL EFAYNNSY  SI++AP+E LYGRRC
Sbjct: 1513 QTDGQSERTIQVLEDMLRACVMDFGGQWEQFLPLAEFAYNNSYHSSIQMAPFEALYGRRC 1572

Query: 228  IFPIRWFEVCE---------QNYLDRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDL 76
              P+ WFE  E         Q  LD++         V    +       +  +D RRR L
Sbjct: 1573 RSPVGWFESTEPRPRGTDLLQEALDQVR--------VIQDRLRTAQSRHQSYADQRRRPL 1624

Query: 75   KVNVDDGAFLKVSLMKGVTRFERKG 1
            + +V D  FL+VS MKGV RF R+G
Sbjct: 1625 RFSVGDRVFLRVSPMKGVMRFGRRG 1649



 Score = 84.0 bits (206), Expect(3) = 9e-50
 Identities = 56/125 (44%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
 Frame = -2

Query: 760  KIYHVLKDFI--SGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  L+     SGM+ R +   +  CL CQ VK EH  PGG  Q + IP  KWE I M 
Sbjct: 1364 KMYRDLRQHYWWSGMR-RDIADFVSRCLCCQQVKAEHLRPGGEFQRLPIPEWKWERITMD 1422

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPL-VY 410
            F+  LP + +  +SI VIVD+LTK AH  PV TT S E   ++Y+RE + L   VP+ + 
Sbjct: 1423 FVVGLPRTSRGVDSIWVIVDRLTKSAHFLPVHTTFSAERLARIYIREVVRL-HGVPVSII 1481

Query: 409  SDRWS 395
            SDR S
Sbjct: 1482 SDRGS 1486



 Score = 53.5 bits (127), Expect(3) = 9e-50
 Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSHDPW----------EFYPT*KKIKQLW*RXX 1048
            R W +L   YD+ ILY+ GK NV  DALS              E  P    I+ L     
Sbjct: 1213 RRWIELLKDYDLSILYHPGKANVVADALSRKAVSMGSLAFLSVEERPLALDIQSL----- 1267

Query: 1047 XXXXXXXSTLEL*I*WCYL----VESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQR 880
                     L++    C L    V+SSL+ +++  QF+   L+ LR+ +           
Sbjct: 1268 ---ANSMVRLDISDSRCVLAFMRVQSSLLDRIRGCQFEDDTLVALRDRVLADDGGQ-ATL 1323

Query: 879  GDDSALRYQGRLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
              D  L++ GR+CV  +  L++ I++EA  SRYSIH G+ K
Sbjct: 1324 DPDGVLKFAGRICVPRVGDLIQLILSEAHESRYSIHPGTAK 1364


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  104 bits (260), Expect(4) = 2e-49
 Identities = 60/140 (42%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            Q+DGQ+E T  T++D+ RACV+DF+       P+ EFAYNNSY  SIK+AP+E LYGR+C
Sbjct: 693  QSDGQSERTIQTLEDMLRACVIDFQGGWSQHLPMAEFAYNNSYQASIKMAPFEALYGRKC 752

Query: 228  IFPIRWFEVCEQNYLDRLHPSGHGES*VDSKVVE----NISKSPKVISDVRRRDLKVNVD 61
              P+ W EV E      L P    E+ V  ++            +  +D RRRDL+  V 
Sbjct: 753  RSPLHWSEVGESL---ALGPDVLQEAEVKVRIARERLLTAQSRQRSYADRRRRDLEFQVG 809

Query: 60   DGAFLKVSLMKGVTRFERKG 1
            D  FLKVS  +G+ RF  +G
Sbjct: 810  DHVFLKVSPTRGIKRFGIRG 829



 Score = 84.0 bits (206), Expect(4) = 2e-49
 Identities = 45/96 (46%), Positives = 60/96 (62%)
 Frame = -2

Query: 688 CLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMGFITNLPCSFQKHNSI*VIVDQLTKLA 509
           CL CQ VK EH++P G  Q++ IPV KWE I M F+T LP S   H++I VIVD+LTK A
Sbjct: 569 CLTCQQVKAEHRVPAGKLQSLPIPVWKWEKITMDFVTGLPRSQAGHDAIWVIVDRLTKSA 628

Query: 508 HLFPVKTTNSMEDYIKLYVRETITL*ISVPLVYSDR 401
           H  P+ TT + E   ++Y+ E + L      + SDR
Sbjct: 629 HFIPIHTTWTGERLAQVYLDEIVRLHGVPTSIVSDR 664



 Score = 55.8 bits (133), Expect(4) = 2e-49
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSHDPWE----FYPT*KKIKQLW*RXXXXXXXX 1030
            R W +L   YD+ ILY+ GK NV  DALS    E       T  ++ +   R        
Sbjct: 398  RRWLELLKDYDLTILYHPGKANVVADALSRKSMENLAMHVVTQPRLIEQMKRLELEIVTP 457

Query: 1029 XSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDDSALRYQG 850
             + + L      +V+ +L+ ++KE Q     L +++  +    T  F   GD   +R++G
Sbjct: 458  DTPMRL---MTLVVQPTLLDRIKEKQASDVELQKIKGKMVDGCTGDFTLDGD-GLMRFRG 513

Query: 849  RLCVIDLDGLLERIIAEACSSRYSIHSGSTKYIMFSKIL 733
            R+CV    G+ E I+ EA  + Y+IH G TK     K+L
Sbjct: 514  RICVPADSGIKEDILQEAHRAPYAIHPGGTKMYKDLKLL 552



 Score = 20.8 bits (42), Expect(4) = 2e-49
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 734 Y*WNEMKKNVADFVA 690
           Y W  +KK+V +FVA
Sbjct: 553 YWWPGIKKDVGEFVA 567


>gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1537

 Score =  114 bits (286), Expect(3) = 7e-47
 Identities = 64/137 (46%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQ+E T  T++D+ RACV+DF  + D   PL+EFAYNNS+  SI +APYE LYGR+C
Sbjct: 1266 QTDGQSERTIQTLEDMLRACVIDFIGSWDRHLPLVEFAYNNSFQSSIGMAPYEALYGRKC 1325

Query: 228  IFPIRWFEVCEQNYLD-RLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDGA 52
              P+ W EV E+  ++  L    + +  V  + ++      K  SD RR+DL+  VDD  
Sbjct: 1326 RTPLCWDEVGERKLVNVELIDLTNDKVKVIRERLKTAQDRQKNYSDKRRKDLEFEVDDKV 1385

Query: 51   FLKVSLMKGVTRFERKG 1
            FLKVS  KGV RF ++G
Sbjct: 1386 FLKVSPWKGVIRFAKRG 1402



 Score = 77.0 bits (188), Expect(3) = 7e-47
 Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
 Frame = -2

Query: 760  KIYHVLKD--FISGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  +K+  +  GM+ R + + +  CL CQ +K EHQ P G  Q + IP  KWE + M 
Sbjct: 1117 KMYRTIKESYWWPGME-RDIAEFVAKCLTCQQIKAEHQKPSGTLQPLSIPEWKWEHVTMD 1175

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPL-VY 410
            F+  LP +    ++I VIVD+LTK AH   + +T S+E   +LY+ E + L   VP+ + 
Sbjct: 1176 FVLGLPRTQSGKDAIWVIVDRLTKSAHFLAIHSTYSIERLARLYIDEIVRL-HGVPVSIV 1234

Query: 409  SDR 401
            SDR
Sbjct: 1235 SDR 1237



 Score = 45.1 bits (105), Expect(3) = 7e-47
 Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 7/152 (4%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSHDPWEFYPT*KK-----IKQLW*RXXXXXXX 1033
            R W +L   YD+ I Y+  K NV  DALS        T +      + ++          
Sbjct: 971  RQWLELIKDYDLVIDYHPRKANVVADALSRKSSSSLATLRSSYFSMLLEMKSLGIQLNNG 1030

Query: 1032 XXSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDDSALRYQ 853
               TL       ++V  SL+ +++E Q    +L Q  + +   K   F+   DD  L  +
Sbjct: 1031 EDGTLLA----SFVVRPSLLNQIRELQKSDDWLKQEVQKLQDGKASEFRL-SDDGTLMLR 1085

Query: 852  GRLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
             R+CV   D L   I+ EA  S Y++H GSTK
Sbjct: 1086 DRICVPKDDQLRRAILEEAHYSAYALHPGSTK 1117


>emb|CAH66048.1| OSIGBa0131F24.2 [Oryza sativa Indica Group]
          Length = 1437

 Score = 97.4 bits (241), Expect(3) = 9e-47
 Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQ E  +  ++D+ RACVLDF  + D   P  EF+YNNSY  S+++APYE LYGR+C
Sbjct: 1173 QTDGQMERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKC 1232

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              P+ W +  E+     D L  +      +  ++    S+  K  +D RRRDL     D 
Sbjct: 1233 RTPLLWDQTSERQVFGTDILREAEEKVKIIQERLRVAQSRQ-KSYADNRRRDLAFEEGDY 1291

Query: 54   AFLKVSLMKGVTRFERKG 1
             +L+V+ ++GV RF+ KG
Sbjct: 1292 VYLRVTPLRGVHRFQTKG 1309



 Score = 84.3 bits (207), Expect(3) = 9e-47
 Identities = 48/107 (44%), Positives = 62/107 (57%)
 Frame = -2

Query: 715  RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMGFITNLPCSFQKHNSI*V 536
            R + + + LC  CQ VK EHQ P G  Q + IP  KWE I M FIT LP +   H+SI V
Sbjct: 1040 REIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWV 1099

Query: 535  IVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPLVYSDRWS 395
            +VD+LTK+AH  PVKTT +     +LY+   + L      + SDR S
Sbjct: 1100 VVDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGS 1146



 Score = 54.7 bits (130), Expect(3) = 9e-47
 Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALS-----------HDPWEFYPT*KKIKQLW*RX 1051
            R W +L   YD+ I Y+ GK NV  DALS           H PWE     +K+       
Sbjct: 881  RRWLELIKDYDMEIQYHPGKANVVADALSRKSYCNMSKGRHLPWELCQEFEKLN-----L 935

Query: 1050 XXXXXXXXSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDD 871
                    +TLE         + +L  +V+E Q + P + ++++ + + K I + +  D+
Sbjct: 936  DIVSKGFVATLE--------AQPTLFDQVREAQVNDPDIQEIKKNMRRGKAIGYVE--DE 985

Query: 870  SALRYQG-RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
                + G R+CV D   L + I+ EA  + YSIH GSTK
Sbjct: 986  QGTVWLGERICVPDNKELKDTIMKEAHETLYSIHPGSTK 1024


>gb|AAT81665.1| putative retrotransposon protein [Oryza sativa Japonica Group]
            gi|108709836|gb|ABF97631.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2784

 Score = 96.7 bits (239), Expect(3) = 1e-46
 Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQTE  +  ++D+ RAC LDF  + D   P  EF+YNNSY  S+++APYE LYGR+C
Sbjct: 2197 QTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKC 2256

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              P+ W +  E+     D L  +      +  ++    S+  K  +D RRRDL     D 
Sbjct: 2257 RTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRH-KSYADNRRRDLSFEEGDY 2315

Query: 54   AFLKVSLMKGVTRFERKG 1
             +L+V+ ++GV RF  KG
Sbjct: 2316 VYLRVTPLRGVHRFHTKG 2333



 Score = 86.7 bits (213), Expect(3) = 1e-46
 Identities = 55/124 (44%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
 Frame = -2

Query: 760  KIYHVLKD--FISGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  LK+  + + MK R + + + +C  CQ VK EHQ P G  Q + IP  KWE I M 
Sbjct: 2048 KMYQDLKERFWWASMK-REIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMD 2106

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPLVYS 407
            FIT LP +   H+SI VIVD+LTK+AH  PVKTT S     +LY+   + L      + S
Sbjct: 2107 FITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSESRLAELYMARIVCLHGVPKKIVS 2166

Query: 406  DRWS 395
            DR S
Sbjct: 2167 DRGS 2170



 Score = 52.4 bits (124), Expect(3) = 1e-46
 Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSHDPWEFYPT*KKIKQLW*RXXXXXXXXXSTL 1018
            R W +L   YD+ I Y+LGK NV VDALS    + Y    + +QL              L
Sbjct: 1905 RRWLELIKDYDMGIHYHLGKANVVVDALSR---KGYCNATEGRQL----SLELCKEFERL 1957

Query: 1017 EL*I*WCYLVES-----SLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDDSALRYQ 853
             L I     V +     +L+ +V+E Q + P + ++++ + + K I F +  D+    + 
Sbjct: 1958 NLGIVSRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLE--DEHGTVWL 2015

Query: 852  G-RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
            G R+CV D   L + I+ EA  + YSIH GSTK
Sbjct: 2016 GERICVPDNKDLKDAILKEAHDTLYSIHPGSTK 2048


>gb|AAT81698.1| putative retrotransposon protein, 5'-partial [Oryza sativa Japonica
            Group]
          Length = 1633

 Score = 96.7 bits (239), Expect(3) = 1e-46
 Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQTE  +  ++D+ RAC LDF  + D   P  EF+YNNSY  S+++APYE LYGR+C
Sbjct: 1046 QTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKC 1105

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              P+ W +  E+     D L  +      +  ++    S+  K  +D RRRDL     D 
Sbjct: 1106 RTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRH-KSYADNRRRDLSFEEGDY 1164

Query: 54   AFLKVSLMKGVTRFERKG 1
             +L+V+ ++GV RF  KG
Sbjct: 1165 VYLRVTPLRGVHRFHTKG 1182



 Score = 86.7 bits (213), Expect(3) = 1e-46
 Identities = 55/124 (44%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
 Frame = -2

Query: 760  KIYHVLKD--FISGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  LK+  + + MK R + + + +C  CQ VK EHQ P G  Q + IP  KWE I M 
Sbjct: 897  KMYQDLKERFWWASMK-REIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMD 955

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPLVYS 407
            FIT LP +   H+SI VIVD+LTK+AH  PVKTT S     +LY+   + L      + S
Sbjct: 956  FITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSESRLAELYMARIVCLHGVPKKIVS 1015

Query: 406  DRWS 395
            DR S
Sbjct: 1016 DRGS 1019



 Score = 52.4 bits (124), Expect(3) = 1e-46
 Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSHDPWEFYPT*KKIKQLW*RXXXXXXXXXSTL 1018
            R W +L   YD+ I Y+LGK NV VDALS    + Y    + +QL              L
Sbjct: 754  RRWLELIKDYDMGIHYHLGKANVVVDALSR---KGYCNATEGRQL----SLELCKEFERL 806

Query: 1017 EL*I*WCYLVES-----SLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDDSALRYQ 853
             L I     V +     +L+ +V+E Q + P + ++++ + + K I F +  D+    + 
Sbjct: 807  NLGIVSRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLE--DEHGTVWL 864

Query: 852  G-RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
            G R+CV D   L + I+ EA  + YSIH GSTK
Sbjct: 865  GERICVPDNKDLKDAILKEAHDTLYSIHPGSTK 897


>gb|AAM00956.1|AC021892_20 Putative polyprotein [Oryza sativa Japonica Group]
          Length = 1167

 Score = 95.9 bits (237), Expect(3) = 1e-46
 Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQTE  +  ++D+ RAC LDF  + D   P  EF YNNSY  S+++APYE LYGR+C
Sbjct: 903  QTDGQTERVNQILEDMLRACTLDFGGSWDKNLPYAEFLYNNSYQASLQMAPYEALYGRKC 962

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              P+ W +  E+     D L  +      +  ++    S+  K  +D RRRDL     D 
Sbjct: 963  RTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRH-KSYADNRRRDLSFEEGDY 1021

Query: 54   AFLKVSLMKGVTRFERKG 1
             +L+V+ ++GV RF  KG
Sbjct: 1022 VYLRVTPLRGVHRFHTKG 1039



 Score = 85.9 bits (211), Expect(3) = 1e-46
 Identities = 55/124 (44%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
 Frame = -2

Query: 760  KIYHVLKD--FISGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  LK+  + + MK R + + + +C  CQ VK EHQ P G  Q + IP  KWE I M 
Sbjct: 754  KMYQDLKERFWWASMK-REIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMD 812

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPLVYS 407
            FIT LP +   H+SI VIVD+LTK+AH  PVKTT S     +LY+   + L      + S
Sbjct: 813  FITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVRKKIVS 872

Query: 406  DRWS 395
            DR S
Sbjct: 873  DRGS 876



 Score = 53.9 bits (128), Expect(3) = 1e-46
 Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
 Frame = -3

Query: 1215 IATVVFSLRIWFQLY-------YDVCILYYLGKVNVAVDALSHDPWEFYPT*KKIKQLW* 1057
            +A VV +L+IW           YD+ I Y+ GK NV  DALS             K    
Sbjct: 616  LAAVVHALKIWRHYLFGTRTEDYDMGIHYHPGKANVVADALSR------------KGYCN 663

Query: 1056 RXXXXXXXXXSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRG 877
                      + LE         + +L+ +V+E Q + P + ++++ + + K I F +  
Sbjct: 664  ATEGRHRGFVAALE--------AKPTLIDQVREAQINDPDIQKIKKNMRRGKAIGFLE-- 713

Query: 876  DDSALRYQG-RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
            D+    + G R+CV+D   L + I+ EA  + YSIH GSTK
Sbjct: 714  DEQGTVWLGERICVLDNKDLKDAILKEAHDTLYSIHPGSTK 754


>gb|AAV31273.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|54287633|gb|AAV31377.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1196

 Score = 99.0 bits (245), Expect(3) = 2e-46
 Identities = 56/138 (40%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQTE  +  ++D+ RACVLDF  + D   P  EF+YNNSY  S+++APYE LYGR+C
Sbjct: 932  QTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKC 991

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              P+ W +  E+     D L  +      +  ++    S+  K  +D RRRDL     D 
Sbjct: 992  RTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRQ-KSYADNRRRDLAFEEGDY 1050

Query: 54   AFLKVSLMKGVTRFERKG 1
             +L+V+ ++GV RF+ KG
Sbjct: 1051 VYLRVTPLRGVHRFQTKG 1068



 Score = 82.4 bits (202), Expect(3) = 2e-46
 Identities = 52/123 (42%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
 Frame = -2

Query: 760  KIYHVLKD-FISGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMGF 584
            K+Y  LK  F      R + + + LC  CQ VK EHQ P G  Q + IP  KWE I M F
Sbjct: 783  KMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDF 842

Query: 583  ITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPLVYSD 404
            IT LP +   H+SI V+VD+L K+AH  PVKTT +     +LY+   + L      + SD
Sbjct: 843  ITGLPRTSAGHDSIWVVVDRLIKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSD 902

Query: 403  RWS 395
            R S
Sbjct: 903  RGS 905



 Score = 53.9 bits (128), Expect(3) = 2e-46
 Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALS-----------HDPWEFYPT*KKIKQLW*RX 1051
            R W +L   YD+ I Y+ GK NV  DALS           H PWE     +K+       
Sbjct: 640  RRWLELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRHLPWELCQEFEKLN-----L 694

Query: 1050 XXXXXXXXSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDD 871
                    +TLE         + +L  +V+E Q + P + ++++ + + K I + +  D+
Sbjct: 695  DIVSKGFVATLE--------AQPTLFDQVREAQVNDPDIPEIKKNMRRGKAIGYVE--DE 744

Query: 870  SALRYQG-RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
                + G R+CV D   L + I+ EA  + YSIH GSTK
Sbjct: 745  QGTVWLGERICVPDNKELKDTIMKEAHETLYSIHPGSTK 783


>gb|ABA92233.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1483

 Score = 98.6 bits (244), Expect(3) = 2e-46
 Identities = 56/138 (40%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQTE  +  ++D+ RACVLDF  + D   P  EF+YNNSY  S+++APYE LYGR+C
Sbjct: 1219 QTDGQTERINQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKC 1278

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              P+ W +  E+     D L  +      +  ++    S+  K  +D RRRDL     D 
Sbjct: 1279 RTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRQ-KSYADNRRRDLAFEEGDY 1337

Query: 54   AFLKVSLMKGVTRFERKG 1
             +L+V+ ++GV RF+ KG
Sbjct: 1338 VYLRVTPLRGVHRFQTKG 1355



 Score = 84.7 bits (208), Expect(3) = 2e-46
 Identities = 53/123 (43%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
 Frame = -2

Query: 760  KIYHVLKD-FISGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMGF 584
            K+Y  LK  F      R + + + LC  CQ VK EHQ P G  Q + IP  KWE I M F
Sbjct: 1070 KMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDF 1129

Query: 583  ITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPLVYSD 404
            IT LP +   H+SI V+VD+LTK+AH  PVKTT +     +LY+   + L      + SD
Sbjct: 1130 ITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSD 1189

Query: 403  RWS 395
            R S
Sbjct: 1190 RGS 1192



 Score = 51.6 bits (122), Expect(3) = 2e-46
 Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSHD-----------PWEFYPT*KKIKQLW*RX 1051
            R W +L   YD+ I Y+ GK NV  DALS             PWE     +K+       
Sbjct: 927  RRWLELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRRLPWELCQEFEKLN-----L 981

Query: 1050 XXXXXXXXSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDD 871
                    + LE         + +L  +V+E Q + P + ++++ + + K I + +  D+
Sbjct: 982  GIVSNGFVAALE--------AKPTLFDQVREAQVNDPDIQEIKKNMRRGKAIGYVE--DE 1031

Query: 870  SALRYQG-RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
                + G R+CV +  GL + I+ EA  + YSIH GSTK
Sbjct: 1032 QGTVWLGERICVPENKGLKDTIMKEAHETLYSIHPGSTK 1070


>gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao]
          Length = 1263

 Score =  110 bits (276), Expect(3) = 4e-46
 Identities = 63/137 (45%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQ+E T  T++D+ RACV+D     +   PL+EFAYNNS+  SI++AP+E LYGRRC
Sbjct: 1009 QTDGQSEQTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRC 1068

Query: 228  IFPIRWFEVCEQNYL-DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDGA 52
              PI W EV E+  L  +L      +  +  + +       K   D RRRDL+  V D  
Sbjct: 1069 RSPIGWLEVGERKLLGPKLVQDATEKIHMIRQRMLTAQSRQKSYVDNRRRDLEFQVGDHV 1128

Query: 51   FLKVSLMKGVTRFERKG 1
            FLKVS  KGV RF +KG
Sbjct: 1129 FLKVSPTKGVMRFGKKG 1145



 Score = 73.2 bits (178), Expect(3) = 4e-46
 Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
 Frame = -2

Query: 760  KIYHVLKDFI--SGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  LK+     G+K R + + +  CL CQ VK EHQ      Q + +P  KWE I M 
Sbjct: 885  KMYQDLKEVYWWEGLK-RDVAEFVSKCLVCQQVKAEHQKLTRLLQPLPVPKWKWEHIAMD 943

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPLVYS 407
            F+T LP +   ++SI ++VD+LTK AH  PVK T     Y ++YV E +   +   L +S
Sbjct: 944  FVTGLPRTNGGYDSIWIVVDRLTKSAHFLPVKITYGAAQYARVYVDEILQEPLGTKLDFS 1003



 Score = 50.1 bits (118), Expect(3) = 4e-46
 Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 6/151 (3%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSHDPWEFYPT*KKIKQLW*RXXXXXXXXXSTL 1018
            R W +L   YD  ILY+ GK NV  DA S             ++   +           L
Sbjct: 736  RRWMELLKDYDCTILYHPGKANVVADAFSRKSMGSLAHISTGRRSLVKEIHSLGDIGVHL 795

Query: 1017 EL*----I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDDSALRYQG 850
            E+     +   + V   L+ K+KE Q    F+ +  E     K   F  +G D  LRY  
Sbjct: 796  EVAETNALLAHFRVRPILMDKIKEAQSKDEFVTKAIEDPQGRKGKMFT-KGTDGVLRYGT 854

Query: 849  RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
            RL V D DGL   I+ EA  + Y +H G+TK
Sbjct: 855  RLYVPDGDGLRREILEEAHMAAYVVHPGATK 885


>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
          Length = 1152

 Score =  101 bits (252), Expect(3) = 4e-46
 Identities = 58/137 (42%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQ+E T  T++D+ RACVL+   + DD   + EFAYNNSY  S+ + P+E LYGR+C
Sbjct: 886  QTDGQSERTIQTLEDMLRACVLEVGGSWDDFLSVAEFAYNNSYHASLGMPPFEALYGRKC 945

Query: 228  IFPIRWFEVCEQNYL-DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDGA 52
              P+ W EV E+ Y    L      +  +  K ++      K  +D+RRR L+  V D  
Sbjct: 946  RTPLYWDEVGEKQYTGPELVEQAKEKVELIRKNLKAAQDRQKSWADIRRRPLEFAVGDRV 1005

Query: 51   FLKVSLMKGVTRFERKG 1
            +L+ S MKGV RF +KG
Sbjct: 1006 YLRASPMKGVKRFGQKG 1022



 Score = 76.6 bits (187), Expect(3) = 4e-46
 Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
 Frame = -2

Query: 760  KIYHVLKD--FISGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  LK+  +  GMK   + + +  C  CQ VK EH+ PGG  + + +P  KWE I M 
Sbjct: 737  KMYRDLKERYWWLGMK-LNIAEFVAKCDTCQRVKAEHRRPGGLLKPLEVPEWKWENITMD 795

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPL-VY 410
            FIT LP +   H+ I VIVD+LTK AH  P K    ++ + +LY+   + L   VPL + 
Sbjct: 796  FITGLPRTKSGHDMIWVIVDRLTKSAHFLPCKVDMPIKKFTQLYLDNIVRL-HGVPLSIV 854

Query: 409  SDR 401
            SDR
Sbjct: 855  SDR 857



 Score = 55.8 bits (133), Expect(3) = 4e-46
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 5/150 (3%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSHDPWEFYPT*KKIKQLW*RXXXXXXXXXSTL 1018
            R W +    YD+ I Y+ GK NV  DALS  P     T +++                  
Sbjct: 594  RRWLEFVKDYDLDIQYHPGKANVVADALSRRPVNAITTLQEVIHQLDSLQIQVVEREGEA 653

Query: 1017 EL*I*WCY---LVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDDSALRYQGR 847
            +     C+   +  S L+  ++  Q + P L+ L+    +  T+ + Q   +  L Y  R
Sbjct: 654  Q-----CFAPLMARSELLDDIRAKQDEDPVLVDLKRVAREKPTVGY-QLDKNGHLWYGDR 707

Query: 846  LCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
            LCV D+DGL ++++ EA    +++H GSTK
Sbjct: 708  LCVPDVDGLRQQVMDEAHKIAFAVHPGSTK 737


>gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1702

 Score = 99.8 bits (247), Expect(3) = 5e-46
 Identities = 57/138 (41%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQTE  +  ++D+ RACVLDF  + D   P  EF+YNNSY  S+++APYE LYGR+C
Sbjct: 1438 QTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKC 1497

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              PI W +  E+     D L  +      +  ++    S+  K  +D RRRDL     D 
Sbjct: 1498 RTPILWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRQ-KSYADNRRRDLAFEEGDY 1556

Query: 54   AFLKVSLMKGVTRFERKG 1
             +L+V+ ++GV RF+ KG
Sbjct: 1557 VYLRVTPLRGVHRFQTKG 1574



 Score = 84.7 bits (208), Expect(3) = 5e-46
 Identities = 53/123 (43%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
 Frame = -2

Query: 760  KIYHVLKD-FISGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMGF 584
            K+Y  LK  F      R + + + LC  CQ VK EHQ P G  Q + IP  KWE I M F
Sbjct: 1289 KMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDF 1348

Query: 583  ITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPLVYSD 404
            IT LP +   H+SI V+VD+LTK+AH  PVKTT +     +LY+   + L      + SD
Sbjct: 1349 ITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSD 1408

Query: 403  RWS 395
            R S
Sbjct: 1409 RGS 1411



 Score = 49.3 bits (116), Expect(3) = 5e-46
 Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSHD-----------PWEFYPT*KKIKQLW*RX 1051
            R W +L   YD+ I Y+ GK NV  DALS             PW+     +K+       
Sbjct: 1146 RRWLELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRRLPWKLCQEFEKLN-----L 1200

Query: 1050 XXXXXXXXSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDD 871
                    +TLE         + +L  +V+E Q + P + ++++ + + K I + +  D+
Sbjct: 1201 GIVSKGFVATLE--------AQPTLFDQVREAQVNDPDIQEIKKNMRRGKAIGYVE--DE 1250

Query: 870  SALRYQG-RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
                + G R+CV +   L + I+ EA  + YSIH GSTK
Sbjct: 1251 QGTVWLGERICVPENKELKDTIMKEAHETLYSIHPGSTK 1289


>dbj|BAH79971.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 1477

 Score = 96.7 bits (239), Expect(3) = 9e-46
 Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQTE  +  ++D+ RAC LDF  + D   P  EF+YNNSY  S+++APYE LYGR+C
Sbjct: 1213 QTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKC 1272

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              P+ W +  E+     D L  +      +  ++    S+  K  +D RRRDL     D 
Sbjct: 1273 RTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRH-KSYADNRRRDLSFEEGDY 1331

Query: 54   AFLKVSLMKGVTRFERKG 1
             +L+V+ ++GV RF  KG
Sbjct: 1332 VYLRVTPLRGVHRFRTKG 1349



 Score = 87.0 bits (214), Expect(3) = 9e-46
 Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
 Frame = -2

Query: 760  KIYHVLKD--FISGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  LK+  + + MK R++ + + +C  CQ VK EHQ P G  Q + IP  KWE I M 
Sbjct: 1064 KMYQDLKERFWWASMK-RKIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMD 1122

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPLVYS 407
            FIT LP +   H+SI VIVD+LTK+AH  PVKTT S     +LY+   + L      + S
Sbjct: 1123 FITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVS 1182

Query: 406  DRWS 395
            DR S
Sbjct: 1183 DRGS 1186



 Score = 49.3 bits (116), Expect(3) = 9e-46
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSHD-----------PWEFYPT*KKIKQLW*RX 1051
            R W +L   YD+ I Y+ GK NV  DALS             P E     K+ ++L    
Sbjct: 921  RRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNVTEGRQLPMELC---KEFERL--NL 975

Query: 1050 XXXXXXXXSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDD 871
                    + LE         + +L+ +V+E Q + P + ++++ + + K I F +  D+
Sbjct: 976  GIISRGFVAALE--------AKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLE--DE 1025

Query: 870  SALRYQG-RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
                + G R+CV D   L + I+ EA  + YSIH GSTK
Sbjct: 1026 QGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTK 1064


>emb|CAE04932.2| OSJNBa0017P10.9 [Oryza sativa Japonica Group]
          Length = 1752

 Score = 96.7 bits (239), Expect(3) = 1e-45
 Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
 Frame = -3

Query: 408  QTDGQTENTSHTIKDISRACVLDFKYN*DD*FPLIEFAYNNSYCDSIKIAPYEGLYGRRC 229
            QTDGQTE  +  ++D+ RAC LDF  + D   P  EF+YNNSY  S+++APYE LYGR+C
Sbjct: 1488 QTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKC 1547

Query: 228  IFPIRWFEVCEQNYL--DRLHPSGHGES*VDSKVVENISKSPKVISDVRRRDLKVNVDDG 55
              P+ W +  E+     D L  +      +  ++    S+  K  +D RRRDL     D 
Sbjct: 1548 RTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRH-KSYADNRRRDLSFEEGDY 1606

Query: 54   AFLKVSLMKGVTRFERKG 1
             +L+V+ ++GV RF  KG
Sbjct: 1607 VYLRVTPLRGVHRFHTKG 1624



 Score = 86.3 bits (212), Expect(3) = 1e-45
 Identities = 55/124 (44%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
 Frame = -2

Query: 760  KIYHVLKD--FISGMK*RRM*QILWLCLNCQ*VKDEHQMPGGFTQNIHIPV*KWEMINMG 587
            K+Y  LK+  + + MK R + + + +C  CQ VK EHQ P G  Q + IP  KWE I M 
Sbjct: 1339 KMYQDLKERFWWASMK-REIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMD 1397

Query: 586  FITNLPCSFQKHNSI*VIVDQLTKLAHLFPVKTTNSMEDYIKLYVRETITL*ISVPLVYS 407
            FIT LP +   H+SI VIVD+LTK+AH  PVKTT S     +LY+   + L      + S
Sbjct: 1398 FITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVS 1457

Query: 406  DRWS 395
            DR S
Sbjct: 1458 DRGS 1461



 Score = 49.7 bits (117), Expect(3) = 1e-45
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
 Frame = -3

Query: 1191 RIWFQLY--YDVCILYYLGKVNVAVDALSHD-----------PWEFYPT*KKIKQLW*RX 1051
            R W +L   YD+ I Y+ GK NV  DALS             P E     K+ ++L    
Sbjct: 1196 RRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPLELC---KEFERL--NL 1250

Query: 1050 XXXXXXXXSTLEL*I*WCYLVESSLVAKVKENQFDAPFLLQLREGIHKHKTITFKQRGDD 871
                    + LE         + +L+ +V+E Q + P +L++++ + + K I F +  D+
Sbjct: 1251 GIVSRGFVAALE--------AKPTLIDQVREAQINDPDILEIKKNMRRGKAIGFLE--DE 1300

Query: 870  SALRYQG-RLCVIDLDGLLERIIAEACSSRYSIHSGSTK 757
                + G R+CV D   L + I+ E   + YSIH GSTK
Sbjct: 1301 QGTVWLGERICVPDNKDLKDAILKETHDTLYSIHPGSTK 1339