BLASTX nr result
ID: Atropa21_contig00017332
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00017332 (664 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006344842.1| PREDICTED: probable U6 snRNA-associated Sm-l... 129 1e-27 ref|NP_001274903.1| probable U6 snRNA-associated Sm-like protein... 129 1e-27 ref|XP_004230242.1| PREDICTED: probable U6 snRNA-associated Sm-l... 122 7e-26 ref|XP_006479933.1| PREDICTED: probable U6 snRNA-associated Sm-l... 120 3e-25 ref|XP_006444300.1| hypothetical protein CICLE_v10022685mg [Citr... 120 3e-25 ref|XP_006432790.1| hypothetical protein CICLE_v10002769mg [Citr... 120 5e-25 ref|XP_004494370.1| PREDICTED: probable U6 snRNA-associated Sm-l... 120 5e-25 sp|Q43582.1|LSM4_TOBAC RecName: Full=Probable U6 snRNA-associate... 119 6e-25 gb|EXB36416.1| hypothetical protein L484_001116 [Morus notabilis] 119 1e-24 gb|ESW35094.1| hypothetical protein PHAVU_001G206200g [Phaseolus... 119 1e-24 ref|XP_006575116.1| PREDICTED: probable U6 snRNA-associated Sm-l... 118 1e-24 ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-l... 118 1e-24 emb|CBI39513.3| unnamed protein product [Vitis vinifera] 118 1e-24 ref|XP_002283804.1| PREDICTED: probable U6 snRNA-associated Sm-l... 118 1e-24 gb|EMJ01688.1| hypothetical protein PRUPE_ppa012867mg [Prunus pe... 118 2e-24 ref|XP_006588394.1| PREDICTED: uncharacterized protein LOC100500... 117 4e-24 ref|XP_006588395.1| PREDICTED: uncharacterized protein LOC100500... 117 4e-24 gb|EOX95046.1| Small nuclear ribonucleoprotein family protein is... 116 5e-24 ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-l... 116 5e-24 emb|CBI36838.3| unnamed protein product [Vitis vinifera] 116 5e-24 >ref|XP_006344842.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like [Solanum tuberosum] Length = 153 Score = 129 bits (323), Expect = 1e-27 Identities = 63/77 (81%), Positives = 63/77 (81%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 46 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRGDRKPPGVGGRGR 105 Query: 183 XXXXXDESAAGRQAKGI 233 DE AAGRQAKGI Sbjct: 106 GRGGRDEGAAGRQAKGI 122 >ref|NP_001274903.1| probable U6 snRNA-associated Sm-like protein LSm4-like [Solanum tuberosum] gi|77745469|gb|ABB02633.1| glycine rich protein-like [Solanum tuberosum] gi|82623401|gb|ABB87115.1| glycine rich protein-like [Solanum tuberosum] Length = 147 Score = 129 bits (323), Expect = 1e-27 Identities = 63/77 (81%), Positives = 63/77 (81%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRGDRKPPGVGGRGR 99 Query: 183 XXXXXDESAAGRQAKGI 233 DE AAGRQAKGI Sbjct: 100 GRGGRDEGAAGRQAKGI 116 >ref|XP_004230242.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like isoform 1 [Solanum lycopersicum] gi|460368781|ref|XP_004230243.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like isoform 2 [Solanum lycopersicum] Length = 148 Score = 122 bits (307), Expect = 7e-26 Identities = 62/78 (79%), Positives = 62/78 (79%), Gaps = 1/78 (1%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRGDRKPPGVGGRGR 99 Query: 183 XXXXXDE-SAAGRQAKGI 233 DE AAGRQ KGI Sbjct: 100 GRGGRDEGGAAGRQGKGI 117 >ref|XP_006479933.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like isoform X3 [Citrus sinensis] Length = 136 Score = 120 bits (302), Expect = 3e-25 Identities = 59/77 (76%), Positives = 62/77 (80%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 26 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP--GVGRG 83 Query: 183 XXXXXDESAAGRQAKGI 233 ++ A GRQAKG+ Sbjct: 84 RGRGREDGAGGRQAKGV 100 >ref|XP_006444300.1| hypothetical protein CICLE_v10022685mg [Citrus clementina] gi|568852536|ref|XP_006479931.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like isoform X1 [Citrus sinensis] gi|568852538|ref|XP_006479932.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like isoform X2 [Citrus sinensis] gi|557546562|gb|ESR57540.1| hypothetical protein CICLE_v10022685mg [Citrus clementina] Length = 150 Score = 120 bits (302), Expect = 3e-25 Identities = 59/77 (76%), Positives = 62/77 (80%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP--GVGRG 97 Query: 183 XXXXXDESAAGRQAKGI 233 ++ A GRQAKG+ Sbjct: 98 RGRGREDGAGGRQAKGV 114 >ref|XP_006432790.1| hypothetical protein CICLE_v10002769mg [Citrus clementina] gi|567880465|ref|XP_006432791.1| hypothetical protein CICLE_v10002769mg [Citrus clementina] gi|568835042|ref|XP_006471593.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like [Citrus sinensis] gi|557534912|gb|ESR46030.1| hypothetical protein CICLE_v10002769mg [Citrus clementina] gi|557534913|gb|ESR46031.1| hypothetical protein CICLE_v10002769mg [Citrus clementina] Length = 150 Score = 120 bits (300), Expect = 5e-25 Identities = 59/77 (76%), Positives = 62/77 (80%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP--GVGRG 97 Query: 183 XXXXXDESAAGRQAKGI 233 ++ A+GRQ KGI Sbjct: 98 RGRGREDGASGRQTKGI 114 >ref|XP_004494370.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like [Cicer arietinum] Length = 150 Score = 120 bits (300), Expect = 5e-25 Identities = 59/77 (76%), Positives = 62/77 (80%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 97 Query: 183 XXXXXDESAAGRQAKGI 233 ++SA GRQ KG+ Sbjct: 98 RGRGREDSAGGRQPKGV 114 >sp|Q43582.1|LSM4_TOBAC RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4; AltName: Full=Glycine-rich protein 10; Short=GRP 10 gi|790473|emb|CAA58702.1| unnamed protein product [Nicotiana tabacum] Length = 146 Score = 119 bits (299), Expect = 6e-25 Identities = 59/77 (76%), Positives = 61/77 (79%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE KSR DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYVRGNTIKYLRVPDEVIDKVQEEAKSRTDRKPP-GVGRAR 98 Query: 183 XXXXXDESAAGRQAKGI 233 D+SA GRQ KGI Sbjct: 99 ARGGRDDSAVGRQPKGI 115 >gb|EXB36416.1| hypothetical protein L484_001116 [Morus notabilis] Length = 165 Score = 119 bits (297), Expect = 1e-24 Identities = 59/77 (76%), Positives = 61/77 (79%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 55 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP--GVGRG 112 Query: 183 XXXXXDESAAGRQAKGI 233 ++ A GR AKGI Sbjct: 113 RGRGREDGAGGRPAKGI 129 >gb|ESW35094.1| hypothetical protein PHAVU_001G206200g [Phaseolus vulgaris] Length = 148 Score = 119 bits (297), Expect = 1e-24 Identities = 59/77 (76%), Positives = 61/77 (79%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPP--GVGRG 97 Query: 183 XXXXXDESAAGRQAKGI 233 +E A GRQ KGI Sbjct: 98 RGRGREEGAGGRQPKGI 114 >ref|XP_006575116.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like isoform X2 [Glycine max] Length = 147 Score = 118 bits (296), Expect = 1e-24 Identities = 59/77 (76%), Positives = 60/77 (77%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 97 Query: 183 XXXXXDESAAGRQAKGI 233 D+ GRQ KGI Sbjct: 98 RGRGRDDGPGGRQPKGI 114 >ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like isoform X1 [Glycine max] Length = 149 Score = 118 bits (296), Expect = 1e-24 Identities = 59/77 (76%), Positives = 60/77 (77%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 97 Query: 183 XXXXXDESAAGRQAKGI 233 D+ GRQ KGI Sbjct: 98 RGRGRDDGPGGRQPKGI 114 >emb|CBI39513.3| unnamed protein product [Vitis vinifera] Length = 162 Score = 118 bits (296), Expect = 1e-24 Identities = 59/77 (76%), Positives = 61/77 (79%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPP Sbjct: 53 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKNRADRKPP--GVGRG 110 Query: 183 XXXXXDESAAGRQAKGI 233 +E A GR AKGI Sbjct: 111 RGRGREEGAGGRPAKGI 127 >ref|XP_002283804.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like [Vitis vinifera] Length = 149 Score = 118 bits (296), Expect = 1e-24 Identities = 59/77 (76%), Positives = 61/77 (79%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKNRADRKPP--GVGRG 97 Query: 183 XXXXXDESAAGRQAKGI 233 +E A GR AKGI Sbjct: 98 RGRGREEGAGGRPAKGI 114 >gb|EMJ01688.1| hypothetical protein PRUPE_ppa012867mg [Prunus persica] Length = 151 Score = 118 bits (295), Expect = 2e-24 Identities = 59/77 (76%), Positives = 59/77 (76%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRG 99 Query: 183 XXXXXDESAAGRQAKGI 233 D GRQ KGI Sbjct: 100 RGGRED-GPGGRQTKGI 115 >ref|XP_006588394.1| PREDICTED: uncharacterized protein LOC100500134 isoform X1 [Glycine max] Length = 173 Score = 117 bits (292), Expect = 4e-24 Identities = 58/77 (75%), Positives = 60/77 (77%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 64 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 121 Query: 183 XXXXXDESAAGRQAKGI 233 ++ GRQ KGI Sbjct: 122 RGRGREDGPGGRQPKGI 138 >ref|XP_006588395.1| PREDICTED: uncharacterized protein LOC100500134 isoform X2 [Glycine max] Length = 149 Score = 117 bits (292), Expect = 4e-24 Identities = 58/77 (75%), Positives = 60/77 (77%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 97 Query: 183 XXXXXDESAAGRQAKGI 233 ++ GRQ KGI Sbjct: 98 RGRGREDGPGGRQPKGI 114 >gb|EOX95046.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma cacao] gi|508703151|gb|EOX95047.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma cacao] gi|508703152|gb|EOX95048.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma cacao] Length = 149 Score = 116 bits (291), Expect = 5e-24 Identities = 57/77 (74%), Positives = 60/77 (77%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPP--GVGRG 97 Query: 183 XXXXXDESAAGRQAKGI 233 ++ GRQ KG+ Sbjct: 98 RGRSREDGPGGRQPKGV 114 >ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like [Glycine max] Length = 148 Score = 116 bits (291), Expect = 5e-24 Identities = 58/77 (75%), Positives = 60/77 (77%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPP--GVGRG 97 Query: 183 XXXXXDESAAGRQAKGI 233 ++ GR AKGI Sbjct: 98 RGRGREDGPGGRPAKGI 114 >emb|CBI36838.3| unnamed protein product [Vitis vinifera] Length = 196 Score = 116 bits (291), Expect = 5e-24 Identities = 57/77 (74%), Positives = 62/77 (80%) Frame = +3 Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPP Sbjct: 86 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKNRADRKPP--GVGRG 143 Query: 183 XXXXXDESAAGRQAKGI 233 ++ ++GR AKGI Sbjct: 144 RGRGREDGSSGRPAKGI 160