BLASTX nr result

ID: Atropa21_contig00017332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00017332
         (664 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344842.1| PREDICTED: probable U6 snRNA-associated Sm-l...   129   1e-27
ref|NP_001274903.1| probable U6 snRNA-associated Sm-like protein...   129   1e-27
ref|XP_004230242.1| PREDICTED: probable U6 snRNA-associated Sm-l...   122   7e-26
ref|XP_006479933.1| PREDICTED: probable U6 snRNA-associated Sm-l...   120   3e-25
ref|XP_006444300.1| hypothetical protein CICLE_v10022685mg [Citr...   120   3e-25
ref|XP_006432790.1| hypothetical protein CICLE_v10002769mg [Citr...   120   5e-25
ref|XP_004494370.1| PREDICTED: probable U6 snRNA-associated Sm-l...   120   5e-25
sp|Q43582.1|LSM4_TOBAC RecName: Full=Probable U6 snRNA-associate...   119   6e-25
gb|EXB36416.1| hypothetical protein L484_001116 [Morus notabilis]     119   1e-24
gb|ESW35094.1| hypothetical protein PHAVU_001G206200g [Phaseolus...   119   1e-24
ref|XP_006575116.1| PREDICTED: probable U6 snRNA-associated Sm-l...   118   1e-24
ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-l...   118   1e-24
emb|CBI39513.3| unnamed protein product [Vitis vinifera]              118   1e-24
ref|XP_002283804.1| PREDICTED: probable U6 snRNA-associated Sm-l...   118   1e-24
gb|EMJ01688.1| hypothetical protein PRUPE_ppa012867mg [Prunus pe...   118   2e-24
ref|XP_006588394.1| PREDICTED: uncharacterized protein LOC100500...   117   4e-24
ref|XP_006588395.1| PREDICTED: uncharacterized protein LOC100500...   117   4e-24
gb|EOX95046.1| Small nuclear ribonucleoprotein family protein is...   116   5e-24
ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-l...   116   5e-24
emb|CBI36838.3| unnamed protein product [Vitis vinifera]              116   5e-24

>ref|XP_006344842.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Solanum tuberosum]
          Length = 153

 Score =  129 bits (323), Expect = 1e-27
 Identities = 63/77 (81%), Positives = 63/77 (81%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 46  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRGDRKPPGVGGRGR 105

Query: 183 XXXXXDESAAGRQAKGI 233
                DE AAGRQAKGI
Sbjct: 106 GRGGRDEGAAGRQAKGI 122


>ref|NP_001274903.1| probable U6 snRNA-associated Sm-like protein LSm4-like [Solanum
           tuberosum] gi|77745469|gb|ABB02633.1| glycine rich
           protein-like [Solanum tuberosum]
           gi|82623401|gb|ABB87115.1| glycine rich protein-like
           [Solanum tuberosum]
          Length = 147

 Score =  129 bits (323), Expect = 1e-27
 Identities = 63/77 (81%), Positives = 63/77 (81%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRGDRKPPGVGGRGR 99

Query: 183 XXXXXDESAAGRQAKGI 233
                DE AAGRQAKGI
Sbjct: 100 GRGGRDEGAAGRQAKGI 116


>ref|XP_004230242.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           isoform 1 [Solanum lycopersicum]
           gi|460368781|ref|XP_004230243.1| PREDICTED: probable U6
           snRNA-associated Sm-like protein LSm4-like isoform 2
           [Solanum lycopersicum]
          Length = 148

 Score =  122 bits (307), Expect = 7e-26
 Identities = 62/78 (79%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRGDRKPPGVGGRGR 99

Query: 183 XXXXXDE-SAAGRQAKGI 233
                DE  AAGRQ KGI
Sbjct: 100 GRGGRDEGGAAGRQGKGI 117


>ref|XP_006479933.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           isoform X3 [Citrus sinensis]
          Length = 136

 Score =  120 bits (302), Expect = 3e-25
 Identities = 59/77 (76%), Positives = 62/77 (80%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 26  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP--GVGRG 83

Query: 183 XXXXXDESAAGRQAKGI 233
                ++ A GRQAKG+
Sbjct: 84  RGRGREDGAGGRQAKGV 100


>ref|XP_006444300.1| hypothetical protein CICLE_v10022685mg [Citrus clementina]
           gi|568852536|ref|XP_006479931.1| PREDICTED: probable U6
           snRNA-associated Sm-like protein LSm4-like isoform X1
           [Citrus sinensis] gi|568852538|ref|XP_006479932.1|
           PREDICTED: probable U6 snRNA-associated Sm-like protein
           LSm4-like isoform X2 [Citrus sinensis]
           gi|557546562|gb|ESR57540.1| hypothetical protein
           CICLE_v10022685mg [Citrus clementina]
          Length = 150

 Score =  120 bits (302), Expect = 3e-25
 Identities = 59/77 (76%), Positives = 62/77 (80%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP--GVGRG 97

Query: 183 XXXXXDESAAGRQAKGI 233
                ++ A GRQAKG+
Sbjct: 98  RGRGREDGAGGRQAKGV 114


>ref|XP_006432790.1| hypothetical protein CICLE_v10002769mg [Citrus clementina]
           gi|567880465|ref|XP_006432791.1| hypothetical protein
           CICLE_v10002769mg [Citrus clementina]
           gi|568835042|ref|XP_006471593.1| PREDICTED: probable U6
           snRNA-associated Sm-like protein LSm4-like [Citrus
           sinensis] gi|557534912|gb|ESR46030.1| hypothetical
           protein CICLE_v10002769mg [Citrus clementina]
           gi|557534913|gb|ESR46031.1| hypothetical protein
           CICLE_v10002769mg [Citrus clementina]
          Length = 150

 Score =  120 bits (300), Expect = 5e-25
 Identities = 59/77 (76%), Positives = 62/77 (80%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP--GVGRG 97

Query: 183 XXXXXDESAAGRQAKGI 233
                ++ A+GRQ KGI
Sbjct: 98  RGRGREDGASGRQTKGI 114


>ref|XP_004494370.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Cicer arietinum]
          Length = 150

 Score =  120 bits (300), Expect = 5e-25
 Identities = 59/77 (76%), Positives = 62/77 (80%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 97

Query: 183 XXXXXDESAAGRQAKGI 233
                ++SA GRQ KG+
Sbjct: 98  RGRGREDSAGGRQPKGV 114


>sp|Q43582.1|LSM4_TOBAC RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4;
           AltName: Full=Glycine-rich protein 10; Short=GRP 10
           gi|790473|emb|CAA58702.1| unnamed protein product
           [Nicotiana tabacum]
          Length = 146

 Score =  119 bits (299), Expect = 6e-25
 Identities = 59/77 (76%), Positives = 61/77 (79%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE KSR DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYVRGNTIKYLRVPDEVIDKVQEEAKSRTDRKPP-GVGRAR 98

Query: 183 XXXXXDESAAGRQAKGI 233
                D+SA GRQ KGI
Sbjct: 99  ARGGRDDSAVGRQPKGI 115


>gb|EXB36416.1| hypothetical protein L484_001116 [Morus notabilis]
          Length = 165

 Score =  119 bits (297), Expect = 1e-24
 Identities = 59/77 (76%), Positives = 61/77 (79%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 55  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP--GVGRG 112

Query: 183 XXXXXDESAAGRQAKGI 233
                ++ A GR AKGI
Sbjct: 113 RGRGREDGAGGRPAKGI 129


>gb|ESW35094.1| hypothetical protein PHAVU_001G206200g [Phaseolus vulgaris]
          Length = 148

 Score =  119 bits (297), Expect = 1e-24
 Identities = 59/77 (76%), Positives = 61/77 (79%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPP--GVGRG 97

Query: 183 XXXXXDESAAGRQAKGI 233
                +E A GRQ KGI
Sbjct: 98  RGRGREEGAGGRQPKGI 114


>ref|XP_006575116.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           isoform X2 [Glycine max]
          Length = 147

 Score =  118 bits (296), Expect = 1e-24
 Identities = 59/77 (76%), Positives = 60/77 (77%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 97

Query: 183 XXXXXDESAAGRQAKGI 233
                D+   GRQ KGI
Sbjct: 98  RGRGRDDGPGGRQPKGI 114


>ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           isoform X1 [Glycine max]
          Length = 149

 Score =  118 bits (296), Expect = 1e-24
 Identities = 59/77 (76%), Positives = 60/77 (77%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 97

Query: 183 XXXXXDESAAGRQAKGI 233
                D+   GRQ KGI
Sbjct: 98  RGRGRDDGPGGRQPKGI 114


>emb|CBI39513.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  118 bits (296), Expect = 1e-24
 Identities = 59/77 (76%), Positives = 61/77 (79%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPP       
Sbjct: 53  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKNRADRKPP--GVGRG 110

Query: 183 XXXXXDESAAGRQAKGI 233
                +E A GR AKGI
Sbjct: 111 RGRGREEGAGGRPAKGI 127


>ref|XP_002283804.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Vitis vinifera]
          Length = 149

 Score =  118 bits (296), Expect = 1e-24
 Identities = 59/77 (76%), Positives = 61/77 (79%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKNRADRKPP--GVGRG 97

Query: 183 XXXXXDESAAGRQAKGI 233
                +E A GR AKGI
Sbjct: 98  RGRGREEGAGGRPAKGI 114


>gb|EMJ01688.1| hypothetical protein PRUPE_ppa012867mg [Prunus persica]
          Length = 151

 Score =  118 bits (295), Expect = 2e-24
 Identities = 59/77 (76%), Positives = 59/77 (76%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRG 99

Query: 183 XXXXXDESAAGRQAKGI 233
                D    GRQ KGI
Sbjct: 100 RGGRED-GPGGRQTKGI 115


>ref|XP_006588394.1| PREDICTED: uncharacterized protein LOC100500134 isoform X1 [Glycine
           max]
          Length = 173

 Score =  117 bits (292), Expect = 4e-24
 Identities = 58/77 (75%), Positives = 60/77 (77%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 64  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 121

Query: 183 XXXXXDESAAGRQAKGI 233
                ++   GRQ KGI
Sbjct: 122 RGRGREDGPGGRQPKGI 138


>ref|XP_006588395.1| PREDICTED: uncharacterized protein LOC100500134 isoform X2 [Glycine
           max]
          Length = 149

 Score =  117 bits (292), Expect = 4e-24
 Identities = 58/77 (75%), Positives = 60/77 (77%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 97

Query: 183 XXXXXDESAAGRQAKGI 233
                ++   GRQ KGI
Sbjct: 98  RGRGREDGPGGRQPKGI 114


>gb|EOX95046.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|508703151|gb|EOX95047.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|508703152|gb|EOX95048.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao]
          Length = 149

 Score =  116 bits (291), Expect = 5e-24
 Identities = 57/77 (74%), Positives = 60/77 (77%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPP--GVGRG 97

Query: 183 XXXXXDESAAGRQAKGI 233
                ++   GRQ KG+
Sbjct: 98  RGRSREDGPGGRQPKGV 114


>ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Glycine max]
          Length = 148

 Score =  116 bits (291), Expect = 5e-24
 Identities = 58/77 (75%), Positives = 60/77 (77%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP       
Sbjct: 40  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPP--GVGRG 97

Query: 183 XXXXXDESAAGRQAKGI 233
                ++   GR AKGI
Sbjct: 98  RGRGREDGPGGRPAKGI 114


>emb|CBI36838.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score =  116 bits (291), Expect = 5e-24
 Identities = 57/77 (74%), Positives = 62/77 (80%)
 Frame = +3

Query: 3   LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
           LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPP       
Sbjct: 86  LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKNRADRKPP--GVGRG 143

Query: 183 XXXXXDESAAGRQAKGI 233
                ++ ++GR AKGI
Sbjct: 144 RGRGREDGSSGRPAKGI 160


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