BLASTX nr result
ID: Atropa21_contig00017332
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00017332
(664 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344842.1| PREDICTED: probable U6 snRNA-associated Sm-l... 129 1e-27
ref|NP_001274903.1| probable U6 snRNA-associated Sm-like protein... 129 1e-27
ref|XP_004230242.1| PREDICTED: probable U6 snRNA-associated Sm-l... 122 7e-26
ref|XP_006479933.1| PREDICTED: probable U6 snRNA-associated Sm-l... 120 3e-25
ref|XP_006444300.1| hypothetical protein CICLE_v10022685mg [Citr... 120 3e-25
ref|XP_006432790.1| hypothetical protein CICLE_v10002769mg [Citr... 120 5e-25
ref|XP_004494370.1| PREDICTED: probable U6 snRNA-associated Sm-l... 120 5e-25
sp|Q43582.1|LSM4_TOBAC RecName: Full=Probable U6 snRNA-associate... 119 6e-25
gb|EXB36416.1| hypothetical protein L484_001116 [Morus notabilis] 119 1e-24
gb|ESW35094.1| hypothetical protein PHAVU_001G206200g [Phaseolus... 119 1e-24
ref|XP_006575116.1| PREDICTED: probable U6 snRNA-associated Sm-l... 118 1e-24
ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-l... 118 1e-24
emb|CBI39513.3| unnamed protein product [Vitis vinifera] 118 1e-24
ref|XP_002283804.1| PREDICTED: probable U6 snRNA-associated Sm-l... 118 1e-24
gb|EMJ01688.1| hypothetical protein PRUPE_ppa012867mg [Prunus pe... 118 2e-24
ref|XP_006588394.1| PREDICTED: uncharacterized protein LOC100500... 117 4e-24
ref|XP_006588395.1| PREDICTED: uncharacterized protein LOC100500... 117 4e-24
gb|EOX95046.1| Small nuclear ribonucleoprotein family protein is... 116 5e-24
ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-l... 116 5e-24
emb|CBI36838.3| unnamed protein product [Vitis vinifera] 116 5e-24
>ref|XP_006344842.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Solanum tuberosum]
Length = 153
Score = 129 bits (323), Expect = 1e-27
Identities = 63/77 (81%), Positives = 63/77 (81%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 46 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRGDRKPPGVGGRGR 105
Query: 183 XXXXXDESAAGRQAKGI 233
DE AAGRQAKGI
Sbjct: 106 GRGGRDEGAAGRQAKGI 122
>ref|NP_001274903.1| probable U6 snRNA-associated Sm-like protein LSm4-like [Solanum
tuberosum] gi|77745469|gb|ABB02633.1| glycine rich
protein-like [Solanum tuberosum]
gi|82623401|gb|ABB87115.1| glycine rich protein-like
[Solanum tuberosum]
Length = 147
Score = 129 bits (323), Expect = 1e-27
Identities = 63/77 (81%), Positives = 63/77 (81%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRGDRKPPGVGGRGR 99
Query: 183 XXXXXDESAAGRQAKGI 233
DE AAGRQAKGI
Sbjct: 100 GRGGRDEGAAGRQAKGI 116
>ref|XP_004230242.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
isoform 1 [Solanum lycopersicum]
gi|460368781|ref|XP_004230243.1| PREDICTED: probable U6
snRNA-associated Sm-like protein LSm4-like isoform 2
[Solanum lycopersicum]
Length = 148
Score = 122 bits (307), Expect = 7e-26
Identities = 62/78 (79%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRGDRKPPGVGGRGR 99
Query: 183 XXXXXDE-SAAGRQAKGI 233
DE AAGRQ KGI
Sbjct: 100 GRGGRDEGGAAGRQGKGI 117
>ref|XP_006479933.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
isoform X3 [Citrus sinensis]
Length = 136
Score = 120 bits (302), Expect = 3e-25
Identities = 59/77 (76%), Positives = 62/77 (80%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 26 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP--GVGRG 83
Query: 183 XXXXXDESAAGRQAKGI 233
++ A GRQAKG+
Sbjct: 84 RGRGREDGAGGRQAKGV 100
>ref|XP_006444300.1| hypothetical protein CICLE_v10022685mg [Citrus clementina]
gi|568852536|ref|XP_006479931.1| PREDICTED: probable U6
snRNA-associated Sm-like protein LSm4-like isoform X1
[Citrus sinensis] gi|568852538|ref|XP_006479932.1|
PREDICTED: probable U6 snRNA-associated Sm-like protein
LSm4-like isoform X2 [Citrus sinensis]
gi|557546562|gb|ESR57540.1| hypothetical protein
CICLE_v10022685mg [Citrus clementina]
Length = 150
Score = 120 bits (302), Expect = 3e-25
Identities = 59/77 (76%), Positives = 62/77 (80%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP--GVGRG 97
Query: 183 XXXXXDESAAGRQAKGI 233
++ A GRQAKG+
Sbjct: 98 RGRGREDGAGGRQAKGV 114
>ref|XP_006432790.1| hypothetical protein CICLE_v10002769mg [Citrus clementina]
gi|567880465|ref|XP_006432791.1| hypothetical protein
CICLE_v10002769mg [Citrus clementina]
gi|568835042|ref|XP_006471593.1| PREDICTED: probable U6
snRNA-associated Sm-like protein LSm4-like [Citrus
sinensis] gi|557534912|gb|ESR46030.1| hypothetical
protein CICLE_v10002769mg [Citrus clementina]
gi|557534913|gb|ESR46031.1| hypothetical protein
CICLE_v10002769mg [Citrus clementina]
Length = 150
Score = 120 bits (300), Expect = 5e-25
Identities = 59/77 (76%), Positives = 62/77 (80%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP--GVGRG 97
Query: 183 XXXXXDESAAGRQAKGI 233
++ A+GRQ KGI
Sbjct: 98 RGRGREDGASGRQTKGI 114
>ref|XP_004494370.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Cicer arietinum]
Length = 150
Score = 120 bits (300), Expect = 5e-25
Identities = 59/77 (76%), Positives = 62/77 (80%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 97
Query: 183 XXXXXDESAAGRQAKGI 233
++SA GRQ KG+
Sbjct: 98 RGRGREDSAGGRQPKGV 114
>sp|Q43582.1|LSM4_TOBAC RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4;
AltName: Full=Glycine-rich protein 10; Short=GRP 10
gi|790473|emb|CAA58702.1| unnamed protein product
[Nicotiana tabacum]
Length = 146
Score = 119 bits (299), Expect = 6e-25
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE KSR DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYVRGNTIKYLRVPDEVIDKVQEEAKSRTDRKPP-GVGRAR 98
Query: 183 XXXXXDESAAGRQAKGI 233
D+SA GRQ KGI
Sbjct: 99 ARGGRDDSAVGRQPKGI 115
>gb|EXB36416.1| hypothetical protein L484_001116 [Morus notabilis]
Length = 165
Score = 119 bits (297), Expect = 1e-24
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 55 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP--GVGRG 112
Query: 183 XXXXXDESAAGRQAKGI 233
++ A GR AKGI
Sbjct: 113 RGRGREDGAGGRPAKGI 129
>gb|ESW35094.1| hypothetical protein PHAVU_001G206200g [Phaseolus vulgaris]
Length = 148
Score = 119 bits (297), Expect = 1e-24
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPP--GVGRG 97
Query: 183 XXXXXDESAAGRQAKGI 233
+E A GRQ KGI
Sbjct: 98 RGRGREEGAGGRQPKGI 114
>ref|XP_006575116.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
isoform X2 [Glycine max]
Length = 147
Score = 118 bits (296), Expect = 1e-24
Identities = 59/77 (76%), Positives = 60/77 (77%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 97
Query: 183 XXXXXDESAAGRQAKGI 233
D+ GRQ KGI
Sbjct: 98 RGRGRDDGPGGRQPKGI 114
>ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
isoform X1 [Glycine max]
Length = 149
Score = 118 bits (296), Expect = 1e-24
Identities = 59/77 (76%), Positives = 60/77 (77%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 97
Query: 183 XXXXXDESAAGRQAKGI 233
D+ GRQ KGI
Sbjct: 98 RGRGRDDGPGGRQPKGI 114
>emb|CBI39513.3| unnamed protein product [Vitis vinifera]
Length = 162
Score = 118 bits (296), Expect = 1e-24
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPP
Sbjct: 53 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKNRADRKPP--GVGRG 110
Query: 183 XXXXXDESAAGRQAKGI 233
+E A GR AKGI
Sbjct: 111 RGRGREEGAGGRPAKGI 127
>ref|XP_002283804.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Vitis vinifera]
Length = 149
Score = 118 bits (296), Expect = 1e-24
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKNRADRKPP--GVGRG 97
Query: 183 XXXXXDESAAGRQAKGI 233
+E A GR AKGI
Sbjct: 98 RGRGREEGAGGRPAKGI 114
>gb|EMJ01688.1| hypothetical protein PRUPE_ppa012867mg [Prunus persica]
Length = 151
Score = 118 bits (295), Expect = 2e-24
Identities = 59/77 (76%), Positives = 59/77 (76%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRG 99
Query: 183 XXXXXDESAAGRQAKGI 233
D GRQ KGI
Sbjct: 100 RGGRED-GPGGRQTKGI 115
>ref|XP_006588394.1| PREDICTED: uncharacterized protein LOC100500134 isoform X1 [Glycine
max]
Length = 173
Score = 117 bits (292), Expect = 4e-24
Identities = 58/77 (75%), Positives = 60/77 (77%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 64 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 121
Query: 183 XXXXXDESAAGRQAKGI 233
++ GRQ KGI
Sbjct: 122 RGRGREDGPGGRQPKGI 138
>ref|XP_006588395.1| PREDICTED: uncharacterized protein LOC100500134 isoform X2 [Glycine
max]
Length = 149
Score = 117 bits (292), Expect = 4e-24
Identities = 58/77 (75%), Positives = 60/77 (77%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP--GVGRG 97
Query: 183 XXXXXDESAAGRQAKGI 233
++ GRQ KGI
Sbjct: 98 RGRGREDGPGGRQPKGI 114
>gb|EOX95046.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao] gi|508703151|gb|EOX95047.1| Small nuclear
ribonucleoprotein family protein isoform 1 [Theobroma
cacao] gi|508703152|gb|EOX95048.1| Small nuclear
ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 149
Score = 116 bits (291), Expect = 5e-24
Identities = 57/77 (74%), Positives = 60/77 (77%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPP--GVGRG 97
Query: 183 XXXXXDESAAGRQAKGI 233
++ GRQ KG+
Sbjct: 98 RGRSREDGPGGRQPKGV 114
>ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Glycine max]
Length = 148
Score = 116 bits (291), Expect = 5e-24
Identities = 58/77 (75%), Positives = 60/77 (77%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 40 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPP--GVGRG 97
Query: 183 XXXXXDESAAGRQAKGI 233
++ GR AKGI
Sbjct: 98 RGRGREDGPGGRPAKGI 114
>emb|CBI36838.3| unnamed protein product [Vitis vinifera]
Length = 196
Score = 116 bits (291), Expect = 5e-24
Identities = 57/77 (74%), Positives = 62/77 (80%)
Frame = +3
Query: 3 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRQDRKPPXXXXXXX 182
LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPP
Sbjct: 86 LREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKNRADRKPP--GVGRG 143
Query: 183 XXXXXDESAAGRQAKGI 233
++ ++GR AKGI
Sbjct: 144 RGRGREDGSSGRPAKGI 160