BLASTX nr result
ID: Atropa21_contig00017281
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00017281 (823 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006338046.1| PREDICTED: double-stranded RNA-binding prote... 155 5e-36 ref|XP_006338047.1| PREDICTED: double-stranded RNA-binding prote... 150 5e-34 ref|XP_004238005.1| PREDICTED: uncharacterized protein LOC101257... 142 1e-32 gb|AAR99160.1| dsRNA-binding protein [Solanum lycopersicum] 142 1e-32 >ref|XP_006338046.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X1 [Solanum tuberosum] Length = 406 Score = 155 bits (392), Expect(2) = 5e-36 Identities = 92/159 (57%), Positives = 100/159 (62%), Gaps = 6/159 (3%) Frame = +3 Query: 3 ARTALLAVQSTGLGPTNDNPNDYSAYTVIPLKKVTDLGISNQESXXXXXXXXXXXXXXXX 182 ARTALLAVQS+G P +YS+YTV+P+KKVTDL ISNQES Sbjct: 160 ARTALLAVQSSGFAP------NYSSYTVVPMKKVTDLAISNQESAAALKPKKNRFKKKQT 213 Query: 183 XNGSDASNRVRTKNTGD------NQAEPELHENAAVTTQGTESGPASFAATMDNFVPCNN 344 N SDAS RVRTKNTGD NQA+PE+HENAAV TQGT SGPA FA TM + VP NN Sbjct: 214 RNVSDASYRVRTKNTGDSEVQMVNQAKPEMHENAAVMTQGTGSGPAPFAGTMGDLVPSNN 273 Query: 345 GSSDEQKTALMVNQNDYGTSNLGINFQCGGGDMIEGNVV 461 SS DYGTSNLGIN QCGGG EGN V Sbjct: 274 LSS------------DYGTSNLGINSQCGGGVTTEGNAV 300 Score = 23.1 bits (48), Expect(2) = 5e-36 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 499 VAPVAWSSKLHV 534 +APVAW+ LHV Sbjct: 310 LAPVAWNDNLHV 321 Score = 76.6 bits (187), Expect(2) = 6e-12 Identities = 42/70 (60%), Positives = 44/70 (62%) Frame = +3 Query: 246 PELHENAAVTTQGTESGPASFAATMDNFVPCNNGSSDEQKTALMVNQNDYGTSNLGINFQ 425 P LHENAAV TQGT SGPA FA TM + VP NN S D+GTSNLGIN Q Sbjct: 325 PLLHENAAVMTQGTGSGPAPFADTMGDLVPSNNCGS------------DFGTSNLGINSQ 372 Query: 426 CGGGDMIEGN 455 CGGG EGN Sbjct: 373 CGGGVTTEGN 382 Score = 20.8 bits (42), Expect(2) = 6e-12 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 Query: 499 VAPVAWSSKLHVL 537 VAPVA + LHVL Sbjct: 394 VAPVACNDNLHVL 406 >ref|XP_006338047.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X2 [Solanum tuberosum] Length = 322 Score = 150 bits (379), Expect = 5e-34 Identities = 89/157 (56%), Positives = 98/157 (62%), Gaps = 6/157 (3%) Frame = +3 Query: 3 ARTALLAVQSTGLGPTNDNPNDYSAYTVIPLKKVTDLGISNQESXXXXXXXXXXXXXXXX 182 ARTALLAVQS+G P +YS+YTV+P+KKVTDL ISNQES Sbjct: 160 ARTALLAVQSSGFAP------NYSSYTVVPMKKVTDLAISNQESAAALKPKKNRFKKKQT 213 Query: 183 XNGSDASNRVRTKNTGD------NQAEPELHENAAVTTQGTESGPASFAATMDNFVPCNN 344 N SDAS RVRTKNTGD NQA+PE+HENAAV TQGT SGPA FA TM + VP NN Sbjct: 214 RNVSDASYRVRTKNTGDSEVQMVNQAKPEMHENAAVMTQGTGSGPAPFADTMGDLVPSNN 273 Query: 345 GSSDEQKTALMVNQNDYGTSNLGINFQCGGGDMIEGN 455 S D+GTSNLGIN QCGGG EGN Sbjct: 274 CGS------------DFGTSNLGINSQCGGGVTTEGN 298 >ref|XP_004238005.1| PREDICTED: uncharacterized protein LOC101257657 [Solanum lycopersicum] Length = 433 Score = 142 bits (359), Expect(2) = 1e-32 Identities = 86/159 (54%), Positives = 95/159 (59%), Gaps = 6/159 (3%) Frame = +3 Query: 3 ARTALLAVQSTGLGPTNDNPNDYSAYTVIPLKKVTDLGISNQESXXXXXXXXXXXXXXXX 182 ARTALLAVQS+G P +YS+YTV+P+KKVTDL ISNQES Sbjct: 160 ARTALLAVQSSGFAP------NYSSYTVVPMKKVTDLAISNQESAAALKPKKHRFKKKQT 213 Query: 183 XNGSDASNRVRTKNTGD------NQAEPELHENAAVTTQGTESGPASFAATMDNFVPCNN 344 N SD S VRTK GD NQA+PE+HENAAV T GT SGPA FA TM + VP NN Sbjct: 214 RNFSDVSYHVRTKIFGDSEVQMVNQAKPEMHENAAVMTPGTGSGPAPFAGTMGDLVPSNN 273 Query: 345 GSSDEQKTALMVNQNDYGTSNLGINFQCGGGDMIEGNVV 461 SS DYGTSN+GIN QCGGG EGN V Sbjct: 274 LSS------------DYGTSNIGINSQCGGGVTTEGNAV 300 Score = 24.3 bits (51), Expect(2) = 1e-32 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +1 Query: 499 VAPVAWSSKLHV 534 VAPVAW+ LHV Sbjct: 337 VAPVAWNDNLHV 348 Score = 74.7 bits (182), Expect(2) = 2e-11 Identities = 41/68 (60%), Positives = 42/68 (61%) Frame = +3 Query: 252 LHENAAVTTQGTESGPASFAATMDNFVPCNNGSSDEQKTALMVNQNDYGTSNLGINFQCG 431 LHENAAV TQGT SGPA FA TM + VP NN S DYGTSNLGIN QCG Sbjct: 354 LHENAAVMTQGTGSGPAPFAGTMGDLVPSNNCGS------------DYGTSNLGINSQCG 401 Query: 432 GGDMIEGN 455 G EGN Sbjct: 402 EGATTEGN 409 Score = 20.8 bits (42), Expect(2) = 2e-11 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 Query: 499 VAPVAWSSKLHVL 537 VAPVA + LHVL Sbjct: 421 VAPVACNDNLHVL 433 >gb|AAR99160.1| dsRNA-binding protein [Solanum lycopersicum] Length = 318 Score = 142 bits (359), Expect(2) = 1e-32 Identities = 86/159 (54%), Positives = 95/159 (59%), Gaps = 6/159 (3%) Frame = +3 Query: 3 ARTALLAVQSTGLGPTNDNPNDYSAYTVIPLKKVTDLGISNQESXXXXXXXXXXXXXXXX 182 ARTALLAVQS+G P +YS+YTV+P+KKVTDL ISNQES Sbjct: 45 ARTALLAVQSSGFAP------NYSSYTVVPMKKVTDLAISNQESAAALKPKKHRFKKKQT 98 Query: 183 XNGSDASNRVRTKNTGD------NQAEPELHENAAVTTQGTESGPASFAATMDNFVPCNN 344 N SD S VRTK GD NQA+PE+HENAAV T GT SGPA FA TM + VP NN Sbjct: 99 RNFSDVSYHVRTKIFGDSEVQMVNQAKPEMHENAAVMTPGTGSGPAPFAGTMGDLVPSNN 158 Query: 345 GSSDEQKTALMVNQNDYGTSNLGINFQCGGGDMIEGNVV 461 SS DYGTSN+GIN QCGGG EGN V Sbjct: 159 LSS------------DYGTSNIGINSQCGGGVTTEGNAV 185 Score = 24.3 bits (51), Expect(2) = 1e-32 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +1 Query: 499 VAPVAWSSKLHV 534 VAPVAW+ LHV Sbjct: 222 VAPVAWNDNLHV 233 Score = 74.7 bits (182), Expect(2) = 2e-11 Identities = 41/68 (60%), Positives = 42/68 (61%) Frame = +3 Query: 252 LHENAAVTTQGTESGPASFAATMDNFVPCNNGSSDEQKTALMVNQNDYGTSNLGINFQCG 431 LHENAAV TQGT SGPA FA TM + VP NN S DYGTSNLGIN QCG Sbjct: 239 LHENAAVMTQGTGSGPAPFAGTMGDLVPSNNCGS------------DYGTSNLGINSQCG 286 Query: 432 GGDMIEGN 455 G EGN Sbjct: 287 EGATTEGN 294 Score = 20.8 bits (42), Expect(2) = 2e-11 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1 Query: 499 VAPVAWSSKLHVL 537 VAPVA + LHVL Sbjct: 306 VAPVACNDNLHVL 318