BLASTX nr result

ID: Atropa21_contig00017234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00017234
         (847 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004251822.1| PREDICTED: general transcription factor 3C p...   129   2e-27
ref|XP_006350005.1| PREDICTED: general transcription factor 3C p...   126   9e-27
ref|XP_006350004.1| PREDICTED: general transcription factor 3C p...   126   9e-27
emb|CBI24753.3| unnamed protein product [Vitis vinifera]               66   2e-08
gb|EOY23641.1| Transcription factor IIIC, subunit 5, putative is...    57   8e-06
gb|EOY23640.1| Transcription factor IIIC, subunit 5, putative is...    57   8e-06

>ref|XP_004251822.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           [Solanum lycopersicum]
          Length = 597

 Score =  129 bits (323), Expect = 2e-27
 Identities = 67/103 (65%), Positives = 74/103 (71%), Gaps = 8/103 (7%)
 Frame = -3

Query: 845 EAENNEVDEQAENHXXXXXXXXXXXXXXXXD--------AYESLDLAGQERYVSLHDDPH 690
           +AENNEVDEQAENH                D        AYESLDLA QE  VSLHDDPH
Sbjct: 484 DAENNEVDEQAENHDVDDPDDLEDYEDEFDDDNVEEEMDAYESLDLAVQEGNVSLHDDPH 543

Query: 689 TNHDNISRDFLQELFGNFPFSTAGVDEVQDDPSVGEYKIYDQY 561
           TNHDN+SRD+LQELFGNFP +TAG+DEVQDD S+GEY+IYDQY
Sbjct: 544 TNHDNVSRDYLQELFGNFPSNTAGMDEVQDDQSLGEYQIYDQY 586


>ref|XP_006350005.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           isoform X2 [Solanum tuberosum]
          Length = 542

 Score =  126 bits (317), Expect = 9e-27
 Identities = 67/103 (65%), Positives = 72/103 (69%), Gaps = 8/103 (7%)
 Frame = -3

Query: 845 EAENNEVDEQAENHXXXXXXXXXXXXXXXXD--------AYESLDLAGQERYVSLHDDPH 690
           +AENNEVDEQAENH                D        AY SLDLA QE  VSLHDDPH
Sbjct: 429 DAENNEVDEQAENHDVDEPDDLEDYEDEFDDDNVEEEMDAYVSLDLAVQEGDVSLHDDPH 488

Query: 689 TNHDNISRDFLQELFGNFPFSTAGVDEVQDDPSVGEYKIYDQY 561
           TNHDN+SRD+LQELFGNFP STAG DEVQDD S+GEY+IYDQY
Sbjct: 489 TNHDNVSRDYLQELFGNFPSSTAGTDEVQDDQSLGEYQIYDQY 531


>ref|XP_006350004.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           isoform X1 [Solanum tuberosum]
           gi|565366663|ref|XP_006350006.1| PREDICTED: general
           transcription factor 3C polypeptide 5-like isoform X3
           [Solanum tuberosum]
          Length = 561

 Score =  126 bits (317), Expect = 9e-27
 Identities = 67/103 (65%), Positives = 72/103 (69%), Gaps = 8/103 (7%)
 Frame = -3

Query: 845 EAENNEVDEQAENHXXXXXXXXXXXXXXXXD--------AYESLDLAGQERYVSLHDDPH 690
           +AENNEVDEQAENH                D        AY SLDLA QE  VSLHDDPH
Sbjct: 448 DAENNEVDEQAENHDVDEPDDLEDYEDEFDDDNVEEEMDAYVSLDLAVQEGDVSLHDDPH 507

Query: 689 TNHDNISRDFLQELFGNFPFSTAGVDEVQDDPSVGEYKIYDQY 561
           TNHDN+SRD+LQELFGNFP STAG DEVQDD S+GEY+IYDQY
Sbjct: 508 TNHDNVSRDYLQELFGNFPSSTAGTDEVQDDQSLGEYQIYDQY 550


>emb|CBI24753.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = -3

Query: 752 AYESLDLAGQERYVSLHDDPHTNHDNISRDFLQELFGNFPFSTAGVDEVQD-DPSVGEYK 576
           AYE+LD+ G++   SL    + + +NISRD+LQ LFG+F F+ AG  EVQD D S GEY+
Sbjct: 522 AYEALDMVGEDDEDSLQSRSYLDAENISRDYLQGLFGSFSFTKAGGGEVQDADTSDGEYQ 581

Query: 575 IYDQ 564
           IY+Q
Sbjct: 582 IYEQ 585


>gb|EOY23641.1| Transcription factor IIIC, subunit 5, putative isoform 3 [Theobroma
           cacao]
          Length = 579

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = -3

Query: 749 YESLDLAGQERYVSLHDDPHTNHDNISRDFLQELFGNFPFSTAGVDEVQ-DDPSVGEYKI 573
           YE+L+L G++  + L  D + + +N SR +LQELFG+FP S  G D +Q  D S GEY+I
Sbjct: 500 YETLNLGGEDDEIPLQPDTYLDMENNSRTYLQELFGSFP-SVVGGDAIQAADISDGEYQI 558

Query: 572 YDQY 561
           Y+Q+
Sbjct: 559 YEQF 562


>gb|EOY23640.1| Transcription factor IIIC, subunit 5, putative isoform 2 [Theobroma
           cacao]
          Length = 582

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = -3

Query: 749 YESLDLAGQERYVSLHDDPHTNHDNISRDFLQELFGNFPFSTAGVDEVQ-DDPSVGEYKI 573
           YE+L+L G++  + L  D + + +N SR +LQELFG+FP S  G D +Q  D S GEY+I
Sbjct: 503 YETLNLGGEDDEIPLQPDTYLDMENNSRTYLQELFGSFP-SVVGGDAIQAADISDGEYQI 561

Query: 572 YDQY 561
           Y+Q+
Sbjct: 562 YEQF 565


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