BLASTX nr result

ID: Atropa21_contig00017169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00017169
         (483 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341597.1| PREDICTED: uncharacterized protein LOC102591...    57   2e-08
ref|XP_004234679.1| PREDICTED: uncharacterized protein LOC101252...    54   4e-07
ref|XP_006351562.1| PREDICTED: replication protein A 70 kDa DNA-...    52   5e-06

>ref|XP_006341597.1| PREDICTED: uncharacterized protein LOC102591181 [Solanum tuberosum]
          Length = 162

 Score = 57.0 bits (136), Expect(2) = 2e-08
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = +3

Query: 192 THYEDLFDPFQTYFLSVAHVKESTYVYENPVNKFTWTIDK 311
           THYE  F PFQTY LS+A+V EST  Y N +++FTWTIDK
Sbjct: 7   THYEREFVPFQTYLLSMAYVTESTKAYGNLLHEFTWTIDK 46



 Score = 26.9 bits (58), Expect(2) = 2e-08
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 323 EPIEKVTXXXXXXXXXXXXXXAAFDSFEYQLEGSKFGI 436
           EPIE+V                +FDSF+YQ  G +F I
Sbjct: 51  EPIEQVIPPEPPLLPPTLLKGTSFDSFDYQAIGFEFDI 88


>ref|XP_004234679.1| PREDICTED: uncharacterized protein LOC101252755 [Solanum
           lycopersicum]
          Length = 471

 Score = 53.9 bits (128), Expect(2) = 4e-07
 Identities = 23/40 (57%), Positives = 30/40 (75%)
 Frame = +3

Query: 192 THYEDLFDPFQTYFLSVAHVKESTYVYENPVNKFTWTIDK 311
           T++E  F PF+TY +SVA+VK     YENP+NKF WT+DK
Sbjct: 62  TYFEKEFAPFKTYLVSVAYVKVLPLGYENPLNKFVWTLDK 101



 Score = 25.4 bits (54), Expect(2) = 4e-07
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 323 EPIEKVTXXXXXXXXXXXXXXAAFDSFEYQLEGSKFGI 436
           EPIE+V               A FD+FEYQ +  +F +
Sbjct: 106 EPIEEVKPPEDPLPPPTRLTIAKFDTFEYQSKEFEFDV 143


>ref|XP_006351562.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
           [Solanum tuberosum]
          Length = 447

 Score = 52.4 bits (124), Expect(2) = 5e-06
 Identities = 23/40 (57%), Positives = 28/40 (70%)
 Frame = +3

Query: 192 THYEDLFDPFQTYFLSVAHVKESTYVYENPVNKFTWTIDK 311
           T++E  F PF TY +SVAHVK     YEN +NKF WT+DK
Sbjct: 62  TYFEREFAPFNTYLVSVAHVKVPPLGYENSLNKFIWTLDK 101



 Score = 23.5 bits (49), Expect(2) = 5e-06
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +2

Query: 323 EPIEKVTXXXXXXXXXXXXXXAAFDSFEYQLEGSKFGI 436
           EP+E+V                 FD+FEYQ +  +F +
Sbjct: 106 EPVEEVKPPEDPLPPPRRLALTTFDTFEYQPKEFEFDV 143


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