BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00016988
         (538 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymera...   139   3e-31
ref|XP_004249321.1| PREDICTED: probable mediator of RNA polymera...   134   1e-29
ref|XP_004252669.1| PREDICTED: probable mediator of RNA polymera...   132   4e-29
gb|EXB43778.1| hypothetical protein L484_004632 [Morus notabilis]     117   2e-24
ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymera...   114   1e-23
ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citr...   114   1e-23
ref|XP_002517284.1| conserved hypothetical protein [Ricinus comm...   112   4e-23
gb|EMJ03252.1| hypothetical protein PRUPE_ppa005771mg [Prunus pe...   110   3e-22
emb|CBI32806.3| unnamed protein product [Vitis vinifera]              110   3e-22
ref|XP_004173745.1| PREDICTED: probable mediator of RNA polymera...   107   2e-21
ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymera...   107   2e-21
ref|XP_002308874.2| transcription elongation factor-related fami...   106   3e-21
ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymera...   105   5e-21
gb|EOY08735.1| Transcription elongation factor family protein, p...   105   5e-21
gb|EOY08734.1| Transcription elongation factor family protein, p...   105   5e-21
ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Popu...   105   9e-21
ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Popu...   105   9e-21
ref|XP_006604318.1| PREDICTED: probable mediator of RNA polymera...   103   2e-20
gb|ESW17432.1| hypothetical protein PHAVU_007G239100g [Phaseolus...   102   6e-20
ref|XP_006576774.1| PREDICTED: probable mediator of RNA polymera...   102   7e-20

>ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Solanum tuberosum]
          Length = 455

 Score =  139 bits (351), Expect = 3e-31
 Identities = 67/71 (94%), Positives = 67/71 (94%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SDEDAVQVKLEATKRKLQERYQE ENAKRQRTIQVMELHDIPKKGPNQ VG KN HMRPG
Sbjct: 385 SDEDAVQVKLEATKRKLQERYQEVENAKRQRTIQVMELHDIPKKGPNQGVGLKNAHMRPG 444

Query: 357 NNNRHWANGRR 325
           NNNRHWANGRR
Sbjct: 445 NNNRHWANGRR 455


>ref|XP_004249321.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Solanum lycopersicum]
          Length = 455

 Score =  134 bits (337), Expect = 1e-29
 Identities = 65/71 (91%), Positives = 65/71 (91%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SDEDAVQVKLEATKRKLQERYQEAE AKRQRTIQVMEL DIPKKGPNQ VG KN HMRPG
Sbjct: 385 SDEDAVQVKLEATKRKLQERYQEAEKAKRQRTIQVMELRDIPKKGPNQGVGLKNAHMRPG 444

Query: 357 NNNRHWANGRR 325
           NNNRHW NGRR
Sbjct: 445 NNNRHWTNGRR 455


>ref|XP_004252669.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Solanum lycopersicum]
          Length = 217

 Score =  132 bits (333), Expect = 4e-29
 Identities = 63/71 (88%), Positives = 64/71 (90%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SDED VQVKLEATKRKLQERY+EAE AKR RTIQVMELHDIPKKGPNQ VG KN HMRPG
Sbjct: 147 SDEDVVQVKLEATKRKLQERYEEAEKAKRHRTIQVMELHDIPKKGPNQGVGLKNAHMRPG 206

Query: 357 NNNRHWANGRR 325
           NNNRHW NGRR
Sbjct: 207 NNNRHWTNGRR 217


>gb|EXB43778.1| hypothetical protein L484_004632 [Morus notabilis]
          Length = 464

 Score =  117 bits (293), Expect = 2e-24
 Identities = 56/71 (78%), Positives = 64/71 (90%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SDE AVQVKLEATKRKLQERYQ+AENAKRQRTIQVMELHD+PK+G    +G +NPHM+PG
Sbjct: 398 SDEVAVQVKLEATKRKLQERYQQAENAKRQRTIQVMELHDLPKQG----LGHRNPHMKPG 453

Query: 357 NNNRHWANGRR 325
           N+NRHW +GRR
Sbjct: 454 NHNRHWGHGRR 464


>ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Citrus sinensis]
          Length = 448

 Score =  114 bits (286), Expect = 1e-23
 Identities = 56/71 (78%), Positives = 62/71 (87%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SDEDAVQVKLEATKRKLQE YQ AENAK+QRTIQVMELHD+PK+G    +G +NP +RPG
Sbjct: 382 SDEDAVQVKLEATKRKLQESYQLAENAKKQRTIQVMELHDLPKQG----LGNRNPQLRPG 437

Query: 357 NNNRHWANGRR 325
           N NRHWANGRR
Sbjct: 438 NYNRHWANGRR 448


>ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citrus clementina]
           gi|557532580|gb|ESR43763.1| hypothetical protein
           CICLE_v10011717mg [Citrus clementina]
          Length = 448

 Score =  114 bits (286), Expect = 1e-23
 Identities = 56/71 (78%), Positives = 62/71 (87%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SDEDAVQVKLEATKRKLQE YQ AENAK+QRTIQVMELHD+PK+G    +G +NP +RPG
Sbjct: 382 SDEDAVQVKLEATKRKLQESYQLAENAKKQRTIQVMELHDLPKQG----LGNRNPQLRPG 437

Query: 357 NNNRHWANGRR 325
           N NRHWANGRR
Sbjct: 438 NYNRHWANGRR 448


>ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
           gi|223543547|gb|EEF45077.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 473

 Score =  112 bits (281), Expect = 4e-23
 Identities = 55/71 (77%), Positives = 63/71 (88%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SD+DAVQ KLEATKRKLQERYQ+AENAKRQRTIQVMELHD+PK    Q +  KNP+MRPG
Sbjct: 404 SDDDAVQKKLEATKRKLQERYQQAENAKRQRTIQVMELHDLPK----QALVQKNPNMRPG 459

Query: 357 NNNRHWANGRR 325
           ++NRHWA+GRR
Sbjct: 460 SHNRHWAHGRR 470


>gb|EMJ03252.1| hypothetical protein PRUPE_ppa005771mg [Prunus persica]
          Length = 444

 Score =  110 bits (274), Expect = 3e-22
 Identities = 53/71 (74%), Positives = 62/71 (87%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SDE AVQVKLEATKRKLQERYQ+AENAKRQRT+QVMEL D+PK+G    +  +NPH +PG
Sbjct: 378 SDEVAVQVKLEATKRKLQERYQQAENAKRQRTVQVMELQDLPKQG----LARRNPHGKPG 433

Query: 357 NNNRHWANGRR 325
           N+NRHWA+GRR
Sbjct: 434 NHNRHWAHGRR 444


>emb|CBI32806.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  110 bits (274), Expect = 3e-22
 Identities = 52/71 (73%), Positives = 61/71 (85%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           S+ED +QVKLEA KRKL ERYQ+AE+AKRQRTIQVMEL D+PK+G    +G +NPH+R G
Sbjct: 271 SEEDTIQVKLEAAKRKLHERYQQAEDAKRQRTIQVMELQDLPKQG----LGHRNPHIRHG 326

Query: 357 NNNRHWANGRR 325
           NNNRHWANGRR
Sbjct: 327 NNNRHWANGRR 337


>ref|XP_004173745.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Cucumis sativus]
          Length = 240

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/71 (73%), Positives = 61/71 (85%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SDE AVQVKLEATKRKLQE YQ+AENAK+QRTIQVMELHD+PK+G    +G +NPH++ G
Sbjct: 174 SDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQG----IGHRNPHLKSG 229

Query: 357 NNNRHWANGRR 325
             NR+WANGRR
Sbjct: 230 GFNRNWANGRR 240


>ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Cucumis sativus]
          Length = 452

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/71 (73%), Positives = 61/71 (85%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SDE AVQVKLEATKRKLQE YQ+AENAK+QRTIQVMELHD+PK+G    +G +NPH++ G
Sbjct: 386 SDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQG----IGHRNPHLKSG 441

Query: 357 NNNRHWANGRR 325
             NR+WANGRR
Sbjct: 442 GFNRNWANGRR 452


>ref|XP_002308874.2| transcription elongation factor-related family protein [Populus
           trichocarpa] gi|550335369|gb|EEE92397.2| transcription
           elongation factor-related family protein [Populus
           trichocarpa]
          Length = 483

 Score =  106 bits (265), Expect = 3e-21
 Identities = 54/71 (76%), Positives = 60/71 (84%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SDE  VQ+KLEATKRKLQERYQ+AENAKRQRTIQVMELHD+PK+G  Q    KN  +RPG
Sbjct: 414 SDEVDVQMKLEATKRKLQERYQQAENAKRQRTIQVMELHDLPKQGYVQ----KNQPIRPG 469

Query: 357 NNNRHWANGRR 325
           N NRHWA+GRR
Sbjct: 470 NQNRHWAHGRR 480


>ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like isoform X1 [Glycine max]
           gi|571440343|ref|XP_006575125.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26b-like isoform X2 [Glycine max]
          Length = 453

 Score =  105 bits (263), Expect = 5e-21
 Identities = 49/71 (69%), Positives = 60/71 (84%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SD+ AV VKLEATKRKLQERYQ+AE AKRQRT+QVMELHD+PK+G    +G +NPH++PG
Sbjct: 387 SDDAAVHVKLEATKRKLQERYQQAEKAKRQRTVQVMELHDLPKQG----IGHRNPHVKPG 442

Query: 357 NNNRHWANGRR 325
           N+ R W +GRR
Sbjct: 443 NHKRQWGHGRR 453


>gb|EOY08735.1| Transcription elongation factor family protein, putative isoform 2
           [Theobroma cacao]
          Length = 324

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/71 (73%), Positives = 60/71 (84%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SD+ AVQ KLEATKRKLQERYQ+AENAKR+RTIQVMELHD+PK+G      PKN +M+PG
Sbjct: 258 SDDIAVQRKLEATKRKLQERYQQAENAKRKRTIQVMELHDLPKQGS----VPKNAYMKPG 313

Query: 357 NNNRHWANGRR 325
           N+NR W NGRR
Sbjct: 314 NHNRQWVNGRR 324


>gb|EOY08734.1| Transcription elongation factor family protein, putative isoform 1
           [Theobroma cacao]
          Length = 464

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/71 (73%), Positives = 60/71 (84%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SD+ AVQ KLEATKRKLQERYQ+AENAKR+RTIQVMELHD+PK+G      PKN +M+PG
Sbjct: 398 SDDIAVQRKLEATKRKLQERYQQAENAKRKRTIQVMELHDLPKQGS----VPKNAYMKPG 453

Query: 357 NNNRHWANGRR 325
           N+NR W NGRR
Sbjct: 454 NHNRQWVNGRR 464


>ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
           gi|550320725|gb|EEF04988.2| hypothetical protein
           POPTR_0016s03310g [Populus trichocarpa]
          Length = 480

 Score =  105 bits (261), Expect = 9e-21
 Identities = 54/71 (76%), Positives = 60/71 (84%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SDE AVQ+KLEATKRKLQERYQ+AE AKRQRTIQVMELHD+PK+G  Q    KN  MR G
Sbjct: 414 SDEVAVQMKLEATKRKLQERYQQAEKAKRQRTIQVMELHDLPKQGHVQ----KNQPMRLG 469

Query: 357 NNNRHWANGRR 325
           N+NRHWA+GRR
Sbjct: 470 NHNRHWAHGRR 480


>ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
           gi|222867860|gb|EEF04991.1| hypothetical protein
           POPTR_0016s03310g [Populus trichocarpa]
          Length = 474

 Score =  105 bits (261), Expect = 9e-21
 Identities = 54/71 (76%), Positives = 60/71 (84%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SDE AVQ+KLEATKRKLQERYQ+AE AKRQRTIQVMELHD+PK+G  Q    KN  MR G
Sbjct: 408 SDEVAVQMKLEATKRKLQERYQQAEKAKRQRTIQVMELHDLPKQGHVQ----KNQPMRLG 463

Query: 357 NNNRHWANGRR 325
           N+NRHWA+GRR
Sbjct: 464 NHNRHWAHGRR 474


>ref|XP_006604318.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like isoform X1 [Glycine max]
           gi|571556809|ref|XP_006604319.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26b-like isoform X2 [Glycine max]
          Length = 458

 Score =  103 bits (258), Expect = 2e-20
 Identities = 50/71 (70%), Positives = 60/71 (84%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SD+ AVQVKLEATKRKLQE YQ+AENAKRQRTIQVME++D+PK+G +     +N H +PG
Sbjct: 393 SDDSAVQVKLEATKRKLQESYQQAENAKRQRTIQVMEINDLPKQGLH-----RNTHFKPG 447

Query: 357 NNNRHWANGRR 325
            +NRHWANGRR
Sbjct: 448 YHNRHWANGRR 458


>gb|ESW17432.1| hypothetical protein PHAVU_007G239100g [Phaseolus vulgaris]
          Length = 457

 Score =  102 bits (254), Expect = 6e-20
 Identities = 47/71 (66%), Positives = 58/71 (81%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SD+ +VQVKLEA+KRKLQERYQ+ ENAKRQRT+QVMELHD+PK    Q +G +NPH++PG
Sbjct: 391 SDDASVQVKLEASKRKLQERYQQVENAKRQRTVQVMELHDLPK----QSIGHRNPHVKPG 446

Query: 357 NNNRHWANGRR 325
           N  + W  GRR
Sbjct: 447 NQRKQWGQGRR 457


>ref|XP_006576774.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like isoform X4 [Glycine max]
          Length = 453

 Score =  102 bits (253), Expect = 7e-20
 Identities = 49/71 (69%), Positives = 60/71 (84%)
 Frame = -2

Query: 537 SDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVMELHDIPKKGPNQVVGPKNPHMRPG 358
           SD+DAVQVKLEATKRKLQE YQ+AE AKRQRTIQVME++D+PK+G +     +N H +PG
Sbjct: 388 SDDDAVQVKLEATKRKLQESYQQAEKAKRQRTIQVMEINDLPKQGLH-----RNTHFKPG 442

Query: 357 NNNRHWANGRR 325
            ++RHWANGRR
Sbjct: 443 YHSRHWANGRR 453