BLASTX nr result
ID: Atropa21_contig00016801
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00016801
(519 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006340923.1| PREDICTED: retinoblastoma-related protein 1-... 149 5e-34
ref|NP_001266162.1| retinoblastoma-related protein 1 [Solanum ly... 147 1e-33
sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related prot... 135 7e-30
sp|Q9SXN6.1|RBR1_TOBAC RecName: Full=Retinoblastoma-related prot... 126 3e-27
ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm... 106 3e-21
ref|XP_004307078.1| PREDICTED: retinoblastoma-related protein-li... 100 2e-19
gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Popul... 99 8e-19
ref|XP_002297730.1| RETINOBLASTOMA-RELATED 1 family protein [Pop... 99 8e-19
ref|XP_006432409.1| hypothetical protein CICLE_v10000128mg [Citr... 98 1e-18
ref|XP_006465771.1| PREDICTED: retinoblastoma-related protein-li... 96 5e-18
sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related prote... 96 5e-18
gb|EMJ22108.1| hypothetical protein PRUPE_ppa000710mg [Prunus pe... 95 8e-18
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li... 95 8e-18
gb|EXB62676.1| Retinoblastoma-related protein [Morus notabilis] 93 3e-17
gb|EMJ01590.1| hypothetical protein PRUPE_ppa012540mg [Prunus pe... 93 4e-17
emb|CBI20795.3| unnamed protein product [Vitis vinifera] 92 5e-17
gb|EOY19644.1| Retinoblastoma-related 1 [Theobroma cacao] 86 5e-15
ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-... 85 9e-15
sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related prote... 85 9e-15
ref|XP_006598087.1| PREDICTED: retinoblastoma-related protein 1-... 84 2e-14
>ref|XP_006340923.1| PREDICTED: retinoblastoma-related protein 1-like [Solanum
tuberosum]
Length = 1018
Score = 149 bits (375), Expect = 5e-34
Identities = 77/96 (80%), Positives = 78/96 (81%)
Frame = +1
Query: 232 GDVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFA 411
G VDSLEVRFTDFCKNGLS+GESFMVEA KLF DSKHLLLSNN AIGAI EEVERYWFA
Sbjct: 16 GSVDSLEVRFTDFCKNGLSMGESFMVEARKLFMDSKHLLLSNNAAIGAITPEEVERYWFA 75
Query: 412 FVLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
FVLFSVKRLSEN A FDLCQILRGAK
Sbjct: 76 FVLFSVKRLSENEARNPSNGNEGKGFDLCQILRGAK 111
>ref|NP_001266162.1| retinoblastoma-related protein 1 [Solanum lycopersicum]
gi|380710179|gb|AFD98848.1| retinoblastoma-related
protein 1 [Solanum lycopersicum]
Length = 1018
Score = 147 bits (371), Expect = 1e-33
Identities = 76/96 (79%), Positives = 77/96 (80%)
Frame = +1
Query: 232 GDVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFA 411
G VDSLEVRFTDFCKNGLS+GESFMVEA KLF DSKHLLLSNN AIGAI EEVERYWF
Sbjct: 16 GSVDSLEVRFTDFCKNGLSMGESFMVEARKLFMDSKHLLLSNNAAIGAITPEEVERYWFV 75
Query: 412 FVLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
FVLFSVKRLSEN A FDLCQILRGAK
Sbjct: 76 FVLFSVKRLSENEARNSSNGNEGNGFDLCQILRGAK 111
>sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related protein 1; Short=NbRBR1
gi|51538007|gb|AAU05979.1| retinoblastoma protein
[Nicotiana benthamiana]
Length = 1003
Score = 135 bits (339), Expect = 7e-30
Identities = 69/96 (71%), Positives = 72/96 (75%)
Frame = +1
Query: 232 GDVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFA 411
G VDSLEVRFTDFCKNGLS+GESF+ EA KLF DSKHLLLSNN IG I QE VERYWF
Sbjct: 14 GGVDSLEVRFTDFCKNGLSMGESFVTEATKLFNDSKHLLLSNNSTIGVITQEGVERYWFV 73
Query: 412 FVLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
FVL+SVKRLSE A F LCQILRGAK
Sbjct: 74 FVLYSVKRLSEKEAGNSNNGDKGNAFSLCQILRGAK 109
>sp|Q9SXN6.1|RBR1_TOBAC RecName: Full=Retinoblastoma-related protein 1; Short=NtRb1
gi|4586799|dbj|BAA76477.1| NtRb1 [Nicotiana tabacum]
Length = 961
Score = 126 bits (316), Expect = 3e-27
Identities = 66/96 (68%), Positives = 71/96 (73%)
Frame = +1
Query: 232 GDVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFA 411
G VDSLEVRFTDFCKNGLS+GESF+ EA KLF DSKHLLLSNN IG ++ E VERYWF
Sbjct: 14 GCVDSLEVRFTDFCKNGLSMGESFVTEATKLFNDSKHLLLSNNSTIG-VITEGVERYWFV 72
Query: 412 FVLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
FVL+SVKRLSE F LCQILRGAK
Sbjct: 73 FVLYSVKRLSEKEVGNSSNGNEGNAFSLCQILRGAK 108
>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
Full=Retinoblastoma-related protein
gi|223530511|gb|EEF32393.1| conserved hypothetical
protein [Ricinus communis]
Length = 1020
Score = 106 bits (265), Expect = 3e-21
Identities = 56/96 (58%), Positives = 65/96 (67%)
Frame = +1
Query: 232 GDVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFA 411
G+ D++EVRFTDFCK GLS+ E EAIKLFK +KHLLL+N AIG M EE ER+WFA
Sbjct: 20 GENDTIEVRFTDFCKIGLSVSEDAYEEAIKLFKGTKHLLLANISAIGNGMPEEAERFWFA 79
Query: 412 FVLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
FV +SVKRLSE + LCQILR AK
Sbjct: 80 FVSYSVKRLSEKIRDNMQQRPDDNGLTLCQILRRAK 115
>ref|XP_004307078.1| PREDICTED: retinoblastoma-related protein-like [Fragaria vesca
subsp. vesca]
Length = 1026
Score = 100 bits (249), Expect = 2e-19
Identities = 49/96 (51%), Positives = 66/96 (68%)
Frame = +1
Query: 232 GDVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFA 411
GD+D ++ RFTDFCKNGLS+ E+ + +A+KL ++KH+L+SN+ AIG EE ER+WF+
Sbjct: 27 GDLDPVKARFTDFCKNGLSLDENTLTQALKLLLETKHVLISNSSAIGNGTPEEAERFWFS 86
Query: 412 FVLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
FVLFSVK L+E + F L QILR AK
Sbjct: 87 FVLFSVKTLNEKSSDNSQKASDYNGFSLIQILRAAK 122
>gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Populus tremula x Populus
tremuloides]
Length = 1035
Score = 98.6 bits (244), Expect = 8e-19
Identities = 51/96 (53%), Positives = 65/96 (67%)
Frame = +1
Query: 232 GDVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFA 411
G D++EVRF+DFCK+GL++ E+ +AIKLFKD+KHLL++N +IG EE ER+WFA
Sbjct: 32 GYSDAVEVRFSDFCKSGLALDENTCTQAIKLFKDTKHLLMTNVSSIGNGTSEEAERFWFA 91
Query: 412 FVLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
FV +SVKRLSE LCQILR AK
Sbjct: 92 FVSYSVKRLSEKNRDDAQQKSDDPGLTLCQILRLAK 127
>ref|XP_002297730.1| RETINOBLASTOMA-RELATED 1 family protein [Populus trichocarpa]
gi|254789789|sp|B9GLX8.1|RBR_POPTR RecName:
Full=Retinoblastoma-related protein
gi|222844988|gb|EEE82535.1| RETINOBLASTOMA-RELATED 1
family protein [Populus trichocarpa]
Length = 1035
Score = 98.6 bits (244), Expect = 8e-19
Identities = 51/96 (53%), Positives = 65/96 (67%)
Frame = +1
Query: 232 GDVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFA 411
G D++EVRF+DFCK+GL++ E+ +AIKLFKD+KHLL++N +IG EE ER+WFA
Sbjct: 32 GYSDAVEVRFSDFCKSGLALDENTCTQAIKLFKDTKHLLMTNVSSIGNGTSEEAERFWFA 91
Query: 412 FVLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
FV +SVKRLSE LCQILR AK
Sbjct: 92 FVSYSVKRLSEKNRDDAQQKSDDPGLTLCQILRLAK 127
>ref|XP_006432409.1| hypothetical protein CICLE_v10000128mg [Citrus clementina]
gi|557534531|gb|ESR45649.1| hypothetical protein
CICLE_v10000128mg [Citrus clementina]
Length = 1024
Score = 98.2 bits (243), Expect = 1e-18
Identities = 51/96 (53%), Positives = 62/96 (64%)
Frame = +1
Query: 232 GDVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFA 411
GD D+ E R TD CKNGLS+ E+ E IKLF+++KHLLL+N AIG M EE ER+WFA
Sbjct: 19 GDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFA 78
Query: 412 FVLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
FVL+ V+RLSE F+LC ILR K
Sbjct: 79 FVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMK 114
>ref|XP_006465771.1| PREDICTED: retinoblastoma-related protein-like [Citrus sinensis]
Length = 1024
Score = 95.9 bits (237), Expect = 5e-18
Identities = 50/96 (52%), Positives = 61/96 (63%)
Frame = +1
Query: 232 GDVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFA 411
GD D+ E R TD CKN LS+ E+ E IKLF+++KHLLL+N AIG M EE ER+WFA
Sbjct: 19 GDNDATEARLTDLCKNALSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFA 78
Query: 412 FVLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
FVL+ V+RLSE F+LC ILR K
Sbjct: 79 FVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMK 114
>sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein
gi|89111303|dbj|BAE80326.1| retinoblastoma related
protein [Camellia sinensis]
Length = 1025
Score = 95.9 bits (237), Expect = 5e-18
Identities = 52/92 (56%), Positives = 59/92 (64%)
Frame = +1
Query: 244 SLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFAFVLF 423
SL+ RF FCK GLS+ E+ EA+KLF +SKHLL + AIG EE ERYWFAFVL+
Sbjct: 26 SLDARFAYFCKTGLSLNENTYTEAMKLFSESKHLLSTTISAIGTGTPEEAERYWFAFVLY 85
Query: 424 SVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
SVKRLSE A F LCQILR AK
Sbjct: 86 SVKRLSEANADDSSQGTGGDGFTLCQILRVAK 117
>gb|EMJ22108.1| hypothetical protein PRUPE_ppa000710mg [Prunus persica]
Length = 1026
Score = 95.1 bits (235), Expect = 8e-18
Identities = 50/95 (52%), Positives = 61/95 (64%)
Frame = +1
Query: 235 DVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFAF 414
D D + RFTD CKNGLS+ E+ +A+KLFK++KHLL+SN AIG EE ER+WFAF
Sbjct: 28 DSDPVGARFTDLCKNGLSLDENPYTQAMKLFKETKHLLISNASAIGNGTPEEAERFWFAF 87
Query: 415 VLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
VL+SVK LSE + F L QILR K
Sbjct: 88 VLYSVKTLSEKNSDNSQLSSDDNGFSLFQILRAVK 122
>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
Full=Retinoblastoma-related protein
gi|359392418|gb|AEV45768.1| RBR protein [Vitis
pseudoreticulata]
Length = 1007
Score = 95.1 bits (235), Expect = 8e-18
Identities = 48/93 (51%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Frame = +1
Query: 244 SLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNV-AIGAIMQEEVERYWFAFVL 420
++E RFT+FCKNGL + ES +A+KLF++S HLL + ++ AIG + E+ ERYWFAF+L
Sbjct: 15 AVEARFTEFCKNGLQLDESTFAQAMKLFEESNHLLSTTSLSAIGNGVPEDSERYWFAFIL 74
Query: 421 FSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
+SVKRLSE A F+LCQILR +K
Sbjct: 75 YSVKRLSEGTAENVQQGNDENGFNLCQILRVSK 107
>gb|EXB62676.1| Retinoblastoma-related protein [Morus notabilis]
Length = 1037
Score = 93.2 bits (230), Expect = 3e-17
Identities = 47/96 (48%), Positives = 59/96 (61%)
Frame = +1
Query: 232 GDVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFA 411
G+VD E RF+DFCKNGL++ EA+KLF ++KHLL +N IG+ EE ER+WF
Sbjct: 22 GNVDPAEARFSDFCKNGLALDAKTRAEALKLFGETKHLLQTNVSGIGSGTPEEAERFWFV 81
Query: 412 FVLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
F+L+SVKRLS LCQILR AK
Sbjct: 82 FILYSVKRLSSKDRDNAEERSDDCGVTLCQILRAAK 117
>gb|EMJ01590.1| hypothetical protein PRUPE_ppa012540mg [Prunus persica]
Length = 165
Score = 92.8 bits (229), Expect = 4e-17
Identities = 49/95 (51%), Positives = 62/95 (65%)
Frame = +1
Query: 235 DVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFAF 414
D D ++ RF D CKNGLS+ ++ +A+KLFK++KHLL SN +AIG EE E++WFAF
Sbjct: 28 DSDPIQARFNDLCKNGLSLDDNAYTQAMKLFKETKHLLTSNALAIGNGTPEEAEQFWFAF 87
Query: 415 VLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
VL+SVK LSEN F L QILR AK
Sbjct: 88 VLYSVKTLSEN---NSQMSSDDNGFSLFQILRAAK 119
>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
Length = 1006
Score = 92.4 bits (228), Expect = 5e-17
Identities = 45/92 (48%), Positives = 62/92 (67%)
Frame = +1
Query: 244 SLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFAFVLF 423
++E RFT+FCKNGL + ES +A+KLF++S HLL + +++ E+ ERYWFAF+L+
Sbjct: 15 AVEARFTEFCKNGLQLDESTFAQAMKLFEESNHLLSTTSLSAIGNGPEDSERYWFAFILY 74
Query: 424 SVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
SVKRLSE A F+LCQILR +K
Sbjct: 75 SVKRLSEGTAENVQQGNDENGFNLCQILRVSK 106
>gb|EOY19644.1| Retinoblastoma-related 1 [Theobroma cacao]
Length = 1011
Score = 85.9 bits (211), Expect = 5e-15
Identities = 46/95 (48%), Positives = 62/95 (65%)
Frame = +1
Query: 235 DVDSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFAF 414
D D++E RFT CKN LS+ E EA+KLFK++K+LL S+NV+IG+ EE ER+ F+F
Sbjct: 15 DGDAIEARFTALCKNELSLAEKTCTEAMKLFKETKNLL-SSNVSIGSGTLEEAERFCFSF 73
Query: 415 VLFSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
VL+S+K+LSE F +CQILR K
Sbjct: 74 VLYSLKQLSEKSGENVKQGSDENGFTICQILRATK 108
>ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-like isoform X1
[Glycine max]
Length = 1014
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/93 (46%), Positives = 57/93 (61%)
Frame = +1
Query: 241 DSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFAFVL 420
D +E RF +FCKNGL++ E EA LF ++KH+LLSN ++G EE ERYWFAF+L
Sbjct: 21 DQVESRFFEFCKNGLALEEKSCKEAANLFGETKHILLSNFSSMGNGTSEEAERYWFAFIL 80
Query: 421 FSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
+SVK+L + LC+ILR AK
Sbjct: 81 YSVKKLIQKNDEGEKEDTENIGLSLCRILRAAK 113
>sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related protein
gi|167593891|gb|ABZ85632.1| retinoblastoma-related
protein [Hieracium pilosella]
Length = 1008
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/92 (46%), Positives = 59/92 (64%)
Frame = +1
Query: 244 SLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFAFVLF 423
++E RF+DFCK L++ ++ + EA+KLF SKHL ++N A+G+ EE E YWFAF+LF
Sbjct: 21 TIEARFSDFCKGRLTMDDNALEEAMKLFNQSKHLFMTNASALGSGTPEEAEHYWFAFILF 80
Query: 424 SVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
S+KRLS+ F L QILR AK
Sbjct: 81 SMKRLSKKNDGEDAAKSSENSFKLYQILRVAK 112
>ref|XP_006598087.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
Length = 1005
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/93 (45%), Positives = 57/93 (61%)
Frame = +1
Query: 241 DSLEVRFTDFCKNGLSIGESFMVEAIKLFKDSKHLLLSNNVAIGAIMQEEVERYWFAFVL 420
D +E RF +FCKNGL++ E +A LF ++KH+LLSN ++G EE ERYWFAF+L
Sbjct: 11 DQVESRFVEFCKNGLALEEKSCKKAKNLFGETKHILLSNFSSMGNGTSEEAERYWFAFIL 70
Query: 421 FSVKRLSENVAXXXXXXXXXXXFDLCQILRGAK 519
+SVK+L + LC+ILR AK
Sbjct: 71 YSVKKLIQKNEEGGKEDAENTGLSLCRILRAAK 103