BLASTX nr result

ID: Atropa21_contig00016582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00016582
         (548 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]          80   7e-21
ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578...    64   3e-18

>gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]
          Length = 126

 Score = 80.5 bits (197), Expect(2) = 7e-21
 Identities = 39/78 (50%), Positives = 53/78 (67%)
 Frame = +1

Query: 79  GKPYIA*NSTEVQQMIIKEELQYAVLGKLSYDNIDIKKLRNIIPVQCDIKGRATIGLIEE 258
           GK  I     E +++ +++ LQYAV+ K SY   D+ +LR  IP+Q +IKG   IG +EE
Sbjct: 4   GKTTITWTKKEFEKLTVRQNLQYAVVAKFSYGRPDLYELRKAIPIQLEIKGPCNIGFLEE 63

Query: 259 RYILIRLSLLEDYVRMMS 312
           R+ILIRLSLLEDY  +MS
Sbjct: 64  RHILIRLSLLEDYATLMS 81



 Score = 45.8 bits (107), Expect(2) = 7e-21
 Identities = 22/38 (57%), Positives = 27/38 (71%)
 Frame = +2

Query: 332 LKVHDRYCQMRPLIWDP*FKPEEVTSAAVA*ISFPELP 445
           L+V +RY  +R L WDP F PEE T+ A+A ISFP LP
Sbjct: 86  LRVRNRYFPLRFLKWDPWFNPEEETTIAIAWISFPGLP 123


>ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578882, partial [Solanum
           tuberosum]
          Length = 606

 Score = 64.3 bits (155), Expect(2) = 3e-18
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = +1

Query: 151 VLGKLSYDNIDIKKLRNIIPVQCDIKGRATIGLIEERYILIRLSLLEDYVRMMS 312
           ++GK SY   DI  LR +IP QC++KG   IGL+  RY+LIR SLLEDYV+++S
Sbjct: 44  MIGKFSYGWPDILDLRKLIPKQCELKGEVDIGLLCNRYVLIRASLLEDYVKLLS 97



 Score = 53.1 bits (126), Expect(2) = 3e-18
 Identities = 25/52 (48%), Positives = 33/52 (63%)
 Frame = +2

Query: 323 EYYLKVHDRYCQMRPLIWDP*FKPEEVTSAAVA*ISFPELPPNFFARGCILN 478
           ++Y+  +     MR L WDP F PEE T+ A+A ISFP LPPNFF +  I +
Sbjct: 100 QFYITHNHWSYPMRTLKWDPLFDPEEETTTAIAWISFPSLPPNFFGKETIFS 151


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