BLASTX nr result
ID: Atropa21_contig00016542
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00016542
(572 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006340701.1| PREDICTED: zinc finger CCCH domain-containin... 111 2e-42
ref|XP_006346984.1| PREDICTED: zinc finger CCCH domain-containin... 172 4e-41
ref|XP_004233548.1| PREDICTED: zinc finger CCCH domain-containin... 165 9e-39
ref|XP_004232461.1| PREDICTED: zinc finger CCCH domain-containin... 88 1e-35
gb|EOX90913.1| Nuclear receptor binding set domain containing pr... 62 3e-19
ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin... 73 2e-18
gb|EMJ05884.1| hypothetical protein PRUPE_ppa000244mg [Prunus pe... 69 5e-14
ref|XP_002310841.2| hypothetical protein POPTR_0007s13760g [Popu... 79 8e-13
ref|XP_006380791.1| hypothetical protein POPTR_0007s13760g [Popu... 79 8e-13
ref|XP_002333331.1| predicted protein [Populus trichocarpa] 79 8e-13
ref|XP_006383138.1| hypothetical protein POPTR_0005s11920g [Popu... 79 1e-12
ref|XP_002533810.1| nuclear receptor binding set domain containi... 76 7e-12
emb|CBI17411.3| unnamed protein product [Vitis vinifera] 73 4e-11
gb|EXC35397.1| Zinc finger CCCH domain-containing protein 44 [Mo... 72 8e-11
ref|XP_004292436.1| PREDICTED: zinc finger CCCH domain-containin... 72 1e-10
gb|EXB37117.1| Zinc finger CCCH domain-containing protein 19 [Mo... 69 8e-10
gb|ESW29941.1| hypothetical protein PHAVU_002G111600g [Phaseolus... 69 8e-10
ref|XP_006590714.1| PREDICTED: zinc finger CCCH domain-containin... 66 7e-09
ref|XP_004512106.1| PREDICTED: zinc finger CCCH domain-containin... 65 2e-08
ref|XP_006487367.1| PREDICTED: zinc finger CCCH domain-containin... 64 3e-08
>ref|XP_006340701.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Solanum tuberosum]
Length = 1545
Score = 111 bits (277), Expect(2) = 2e-42
Identities = 61/138 (44%), Positives = 78/138 (56%), Gaps = 17/138 (12%)
Frame = +1
Query: 4 LGSTEDVQLPCQSSLTDELAGTSQAEAFDPLKXXXXXXXXXXEGEKKSADVSFSQGEAGS 183
L ST D+QLPC S++TDE G S+A+AFDP++ EGE KSADV FSQG+ GS
Sbjct: 1320 LSSTGDLQLPCLSTVTDETVGASRADAFDPIRRSGGNSSTSSEGETKSADVLFSQGDVGS 1379
Query: 184 NVPTHC-----------------TKKKTAVPVISQSTGLEAITTDCRAAPGNMTCGGPVQ 312
+P C T + TA + +ST E +T AAPGN++ GGPVQ
Sbjct: 1380 GIPAPCTSGIPAPCTTGIPAPCTTSQTTAFSAMGRSTMFEGVTNGRGAAPGNLSWGGPVQ 1439
Query: 313 GFPNVSQGSSMVTALGRS 366
G+ NV GS+M A G S
Sbjct: 1440 GYTNVGFGSNMGAAWGNS 1457
Score = 87.8 bits (216), Expect(2) = 2e-42
Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Frame = +3
Query: 345 GDCTGTLKHWVIPIGDSGFGKDRSSWCRH-PFGGRGNSGPPPKG-RVCKFYESGHCKKGA 518
G+ +G + W + G+SGFG+ R SW R P+GG G S PPPKG R+CKFYESG CKKGA
Sbjct: 1479 GERSGGPRDWALQGGESGFGRGRPSWNRQQPYGGGGYSRPPPKGQRICKFYESGRCKKGA 1538
Query: 519 SCDYLH 536
+CDYLH
Sbjct: 1539 ACDYLH 1544
>ref|XP_006346984.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Solanum tuberosum]
Length = 1499
Score = 172 bits (437), Expect = 4e-41
Identities = 89/124 (71%), Positives = 97/124 (78%)
Frame = +1
Query: 1 ALGSTEDVQLPCQSSLTDELAGTSQAEAFDPLKXXXXXXXXXXEGEKKSADVSFSQGEAG 180
AL STED+QLPCQSSLT+ELA TSQAEAFDP K EGE KSAD+SFSQGE G
Sbjct: 1335 ALSSTEDMQLPCQSSLTNELARTSQAEAFDPFKRSSRTSSTSSEGETKSADISFSQGETG 1394
Query: 181 SNVPTHCTKKKTAVPVISQSTGLEAITTDCRAAPGNMTCGGPVQGFPNVSQGSSMVTALG 360
N+PT CT KTA+ VI+Q T LEAITTDCRAAPGNMT GGPVQGF NV+QGSSM TA G
Sbjct: 1395 FNIPTPCTTGKTALSVINQRTELEAITTDCRAAPGNMTYGGPVQGFTNVNQGSSMGTACG 1454
Query: 361 RSST 372
S+T
Sbjct: 1455 HSNT 1458
>ref|XP_004233548.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Solanum lycopersicum]
Length = 1541
Score = 165 bits (417), Expect = 9e-39
Identities = 87/124 (70%), Positives = 94/124 (75%)
Frame = +1
Query: 1 ALGSTEDVQLPCQSSLTDELAGTSQAEAFDPLKXXXXXXXXXXEGEKKSADVSFSQGEAG 180
AL STED+QLPCQSSLT+ELA T AEAFDP K EGE KSAD+SFSQG+ G
Sbjct: 1377 ALSSTEDIQLPCQSSLTNELARTLHAEAFDPFKRSSRTSSTSSEGETKSADISFSQGDTG 1436
Query: 181 SNVPTHCTKKKTAVPVISQSTGLEAITTDCRAAPGNMTCGGPVQGFPNVSQGSSMVTALG 360
N+PT CT KTAV VISQST LEAITTDC AAPGNMT GPVQGF NV+QGSSM TA G
Sbjct: 1437 FNIPTPCTTGKTAVSVISQSTELEAITTDCCAAPGNMTYCGPVQGFTNVNQGSSMGTACG 1496
Query: 361 RSST 372
S+T
Sbjct: 1497 YSNT 1500
>ref|XP_004232461.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Solanum lycopersicum]
Length = 1513
Score = 88.2 bits (217), Expect(2) = 1e-35
Identities = 54/130 (41%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Frame = +1
Query: 4 LGSTEDVQLPCQSSLTDELAGTSQAEAFDPLKXXXXXXXXXXEGEKKSADVSFSQGEAGS 183
L ST D+ LPCQSS+ DE G S+A+AFDPL+ EGE KS DV FSQG+
Sbjct: 1300 LSSTGDLLLPCQSSVMDETVGASRADAFDPLRRSGGNSSTSSEGETKSVDVLFSQGDVRC 1359
Query: 184 NVPTHC---------TKKKTAVPVISQSTGLEAITTDCRAAPGNMTCGGPVQGFPNVSQG 336
+P C T + +A I +ST E + AAPG P QG+ NV G
Sbjct: 1360 GIPAPCTTGIPASCTTSQTSAFSAIGRSTVFEGMMNGRGAAPGK-----PSQGYANVGYG 1414
Query: 337 SSMVTALGRS 366
S+M A G S
Sbjct: 1415 SNMGGAWGNS 1424
Score = 87.8 bits (216), Expect(2) = 1e-35
Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Frame = +3
Query: 345 GDCTGTLKHWVIPIGDSGFGKDRSSWCRH-PFGGRGNSGPPPKG-RVCKFYESGHCKKGA 518
G+ +G + W + G+SGFG+ R SW R P+GG G S PPPKG R+CKFYESG CKKGA
Sbjct: 1447 GERSGGPRDWALQGGESGFGRGRPSWNRQQPYGGGGYSRPPPKGQRICKFYESGRCKKGA 1506
Query: 519 SCDYLH 536
+CDYLH
Sbjct: 1507 ACDYLH 1512
>gb|EOX90913.1| Nuclear receptor binding set domain containing protein 1, nsd,
putative isoform 1 [Theobroma cacao]
gi|508699018|gb|EOX90914.1| Nuclear receptor binding set
domain containing protein 1, nsd, putative isoform 1
[Theobroma cacao]
Length = 1443
Score = 62.4 bits (150), Expect(2) = 3e-19
Identities = 33/58 (56%), Positives = 37/58 (63%), Gaps = 9/58 (15%)
Frame = +3
Query: 390 DSGFGKDRSSWCRHP-----FGGRG---NSGPPPKG-RVCKFYESGHCKKGASCDYLH 536
DS FG+ RS W R +GG + PPPKG RVCKFYESG+CKKGASC Y H
Sbjct: 1384 DSSFGRGRSLWNRQSSLSSSYGGPNGVCSFRPPPKGQRVCKFYESGYCKKGASCSYWH 1441
Score = 58.5 bits (140), Expect(2) = 3e-19
Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Frame = +1
Query: 1 ALGSTEDVQLPCQSSLTDELAGTSQAEAFDPLKXXXXXXXXXXEGEK--KSADVSFSQGE 174
AL ST D+Q P QS++T+E G SQ+E D K + ++ + +DVS +Q E
Sbjct: 1224 ALSSTNDLQKPSQSTVTNEPFGVSQSEVLDAQKSSGGHSSTSADMDEDPRPSDVSVNQYE 1283
Query: 175 AGSNVPTHCTKKKT-AVPVISQS--TGLEAITTDCRAAPGN--MTCGGPVQGFPNVSQGS 339
AGS++P T A+ + + +G E T+ AA GN GG QG PNV+ G+
Sbjct: 1284 AGSDMPPAAPPVTTWAMATVDNAWRSGPETTGTNWGAAQGNAHFNWGGLGQGTPNVNWGT 1343
Query: 340 SMVTALGRSS 369
T G S
Sbjct: 1344 VQGTFQGNGS 1353
>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Vitis
vinifera]
Length = 1643
Score = 73.2 bits (178), Expect(2) = 2e-18
Identities = 38/60 (63%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
Frame = +3
Query: 375 VIPIGDSGFGKDRSSWCRHP-FGGRGNSG----PPPKG-RVCKFYESGHCKKGASCDYLH 536
V +GDSGF + R+S R FGG G G PPKG RVCKF+ESGHCKKGASCDYLH
Sbjct: 1583 VFQVGDSGFDRGRTSLNRQSTFGGAGGGGFSSRNPPKGQRVCKFFESGHCKKGASCDYLH 1642
Score = 45.1 bits (105), Expect(2) = 2e-18
Identities = 47/152 (30%), Positives = 58/152 (38%), Gaps = 29/152 (19%)
Frame = +1
Query: 1 ALGSTEDVQLPCQSSLTDELAGTSQAEAFDPLKXXXXXXXXXX--EGEKKSADVSFSQGE 174
AL ST D QL QS+++ E G S + DP K E EKK +D S +Q E
Sbjct: 1403 ALSSTGDFQLTSQSTMSAEPCGASHTDVLDPDKKSVGHSSSNDKVEVEKKPSDGSVNQWE 1462
Query: 175 AGSNVPTHCTKKKTAVPVISQSTG-------------------------LEAITTDCRAA 279
AGS++ T VPV G E T RA
Sbjct: 1463 AGSDIQP--PAPSTDVPVNQWEAGSDVQPPAPSMASWNVAATDNDGRAVSETTDTGWRAV 1520
Query: 280 PG--NMTCGGPVQGFPNVSQGSSMVTALGRSS 369
G N+ GGP QG V SS A G ++
Sbjct: 1521 QGNSNLEWGGPTQGNIEVGWESSQGMAQGNAN 1552
>gb|EMJ05884.1| hypothetical protein PRUPE_ppa000244mg [Prunus persica]
Length = 1412
Score = 68.6 bits (166), Expect(2) = 5e-14
Identities = 32/51 (62%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Frame = +3
Query: 390 DSGFGKDRSSWCRHPFG-GRGNSGPPPKG-RVCKFYESGHCKKGASCDYLH 536
D GFG+ R W R +G G G+ PPPK RVCK+YESG+CKKGASC YLH
Sbjct: 1361 DIGFGRGRFQWNRQTYGNGGGSFRPPPKSQRVCKYYESGYCKKGASCGYLH 1411
Score = 34.7 bits (78), Expect(2) = 5e-14
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +1
Query: 130 EGEKKSADVSFSQGEAGSNVPTHCTKKKT---AVPVISQSTGLEAITTDCRAAPG--NMT 294
EG++K +DVS +Q EAG + K+ A E+ T AA G NM
Sbjct: 1243 EGDRKPSDVSVNQWEAGPEIQNTAPPKENWDIASTDNHWKARSESTETSWEAAQGNANMG 1302
Query: 295 CGGPVQGFPNVSQGSSMVTALGRSS 369
GG QG N G A G +S
Sbjct: 1303 WGGSEQGGANTGWGGGQGIAQGNTS 1327
>ref|XP_002310841.2| hypothetical protein POPTR_0007s13760g [Populus trichocarpa]
gi|550334828|gb|EEE91291.2| hypothetical protein
POPTR_0007s13760g [Populus trichocarpa]
Length = 1605
Score = 79.0 bits (193), Expect = 8e-13
Identities = 37/54 (68%), Positives = 40/54 (74%), Gaps = 5/54 (9%)
Frame = +3
Query: 390 DSGFGKDRSSWCRHPFGGRGNSG----PPPKG-RVCKFYESGHCKKGASCDYLH 536
DSGFG+DRSSW + P G GN PPPKG RVCKFYESG+CKKGASC Y H
Sbjct: 1551 DSGFGRDRSSWNKQPLHGGGNGASTYRPPPKGQRVCKFYESGYCKKGASCSYWH 1604
>ref|XP_006380791.1| hypothetical protein POPTR_0007s13760g [Populus trichocarpa]
gi|550334827|gb|ERP58588.1| hypothetical protein
POPTR_0007s13760g [Populus trichocarpa]
Length = 1422
Score = 79.0 bits (193), Expect = 8e-13
Identities = 37/54 (68%), Positives = 40/54 (74%), Gaps = 5/54 (9%)
Frame = +3
Query: 390 DSGFGKDRSSWCRHPFGGRGNSG----PPPKG-RVCKFYESGHCKKGASCDYLH 536
DSGFG+DRSSW + P G GN PPPKG RVCKFYESG+CKKGASC Y H
Sbjct: 1368 DSGFGRDRSSWNKQPLHGGGNGASTYRPPPKGQRVCKFYESGYCKKGASCSYWH 1421
>ref|XP_002333331.1| predicted protein [Populus trichocarpa]
Length = 110
Score = 79.0 bits (193), Expect = 8e-13
Identities = 37/54 (68%), Positives = 40/54 (74%), Gaps = 5/54 (9%)
Frame = +3
Query: 390 DSGFGKDRSSWCRHPFGGRGNSG----PPPKG-RVCKFYESGHCKKGASCDYLH 536
DSGFG+DRSSW + P G GN PPPKG RVCKFYESG+CKKGASC Y H
Sbjct: 56 DSGFGRDRSSWNKQPLHGGGNGASTYRPPPKGQRVCKFYESGYCKKGASCSYWH 109
>ref|XP_006383138.1| hypothetical protein POPTR_0005s11920g [Populus trichocarpa]
gi|550338718|gb|ERP60935.1| hypothetical protein
POPTR_0005s11920g [Populus trichocarpa]
Length = 1524
Score = 78.6 bits (192), Expect = 1e-12
Identities = 37/54 (68%), Positives = 40/54 (74%), Gaps = 5/54 (9%)
Frame = +3
Query: 390 DSGFGKDRSSWCRHPFGGRGNSG----PPPKG-RVCKFYESGHCKKGASCDYLH 536
DSGFG+DRSSW + P G GN PPPKG RVCKFYESG+CKKGASC Y H
Sbjct: 1470 DSGFGRDRSSWNKQPLCGDGNGASTYRPPPKGQRVCKFYESGYCKKGASCSYWH 1523
>ref|XP_002533810.1| nuclear receptor binding set domain containing protein 1, nsd,
putative [Ricinus communis] gi|223526264|gb|EEF28579.1|
nuclear receptor binding set domain containing protein 1,
nsd, putative [Ricinus communis]
Length = 1586
Score = 75.9 bits (185), Expect = 7e-12
Identities = 36/52 (69%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Frame = +3
Query: 390 DSGFGKDRSSWCRHPFGGRGNSG--PPPKG-RVCKFYESGHCKKGASCDYLH 536
DSG+G+DRSSW R P G G PP KG RVCKFYESG+CKKGASC YLH
Sbjct: 1534 DSGYGRDRSSWNRQPTHGNGGGSFKPPGKGQRVCKFYESGYCKKGASCTYLH 1585
>emb|CBI17411.3| unnamed protein product [Vitis vinifera]
Length = 1362
Score = 73.2 bits (178), Expect = 4e-11
Identities = 38/60 (63%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
Frame = +3
Query: 375 VIPIGDSGFGKDRSSWCRHP-FGGRGNSG----PPPKG-RVCKFYESGHCKKGASCDYLH 536
V +GDSGF + R+S R FGG G G PPKG RVCKF+ESGHCKKGASCDYLH
Sbjct: 1302 VFQVGDSGFDRGRTSLNRQSTFGGAGGGGFSSRNPPKGQRVCKFFESGHCKKGASCDYLH 1361
>gb|EXC35397.1| Zinc finger CCCH domain-containing protein 44 [Morus notabilis]
Length = 1436
Score = 72.4 bits (176), Expect = 8e-11
Identities = 34/54 (62%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
Frame = +3
Query: 390 DSGFGKDRSSWCRHPFGGRGNSG----PPPKG-RVCKFYESGHCKKGASCDYLH 536
DSGF ++R W R PF G N G PPPKG RVCKFYESG+CKKGA+C Y H
Sbjct: 1382 DSGFSRNRHVWNRQPFFGGSNGGVPFRPPPKGQRVCKFYESGYCKKGAACSYWH 1435
>ref|XP_004292436.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
[Fragaria vesca subsp. vesca]
Length = 1642
Score = 72.0 bits (175), Expect = 1e-10
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Frame = +3
Query: 339 QHGDCTGTLKHWVIPIGDSGFGKDRSSWCRHPFGGRGNSG---PPPKGRVCKFYESGHCK 509
Q+GD + GDSGFG + + FGG G G PP KGRVC++YESGHCK
Sbjct: 1571 QNGDRFSNQRDRASHGGDSGFGGGKPWNRQQSFGGGGGGGSSRPPFKGRVCRYYESGHCK 1630
Query: 510 KGASCDYLH 536
KGA+CDYLH
Sbjct: 1631 KGAACDYLH 1639
>gb|EXB37117.1| Zinc finger CCCH domain-containing protein 19 [Morus notabilis]
Length = 800
Score = 68.9 bits (167), Expect = 8e-10
Identities = 34/51 (66%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +3
Query: 387 GDSGFGKDRSSWCRHPFGGRGNSGPPPKG-RVCKFYESGHCKKGASCDYLH 536
GDSG+G + W R G G S PP KG RVCKF+ESGHCKKGASCDYLH
Sbjct: 750 GDSGYGGGKP-WNRQSSFGSGGSKPPFKGQRVCKFHESGHCKKGASCDYLH 799
>gb|ESW29941.1| hypothetical protein PHAVU_002G111600g [Phaseolus vulgaris]
Length = 1431
Score = 68.9 bits (167), Expect = 8e-10
Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
Frame = +3
Query: 390 DSGFGKDRSSWCRHPFGGRGNSG---PPPKG-RVCKFYESGHCKKGASCDYLH 536
+SGFG+ R ++ R P G GN G P PKG RVCKFYESG+CKKGASCDY H
Sbjct: 1378 ESGFGRSRIAFNRQPSYGVGNGGSYRPVPKGQRVCKFYESGYCKKGASCDYWH 1430
>ref|XP_006590714.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Glycine max]
Length = 1375
Score = 65.9 bits (159), Expect = 7e-09
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
Frame = +3
Query: 390 DSGFGKDRSSWCRHPFGGRGNSG---PPPKG-RVCKFYESGHCKKGASCDYLH 536
+SGF + R + R P G GN G P PKG RVCKFYESG+CKKGASCDY H
Sbjct: 1322 ESGFSRSRIPYNRQPSYGVGNGGSYRPLPKGQRVCKFYESGYCKKGASCDYWH 1374
>ref|XP_004512106.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Cicer
arietinum]
Length = 1245
Score = 64.7 bits (156), Expect = 2e-08
Identities = 31/53 (58%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
Frame = +3
Query: 390 DSGFGKDRSSWCRHPFGGRGNSG---PPPKG-RVCKFYESGHCKKGASCDYLH 536
+ G + R++W R P G GN G P PKG R+CKFYESG+CKKGASC YLH
Sbjct: 1192 EPGLVRGRTAWNRQPVFGVGNGGSYRPLPKGQRICKFYESGYCKKGASCAYLH 1244
>ref|XP_006487367.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Citrus
sinensis]
Length = 1782
Score = 63.9 bits (154), Expect = 3e-08
Identities = 34/55 (61%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Frame = +3
Query: 387 GDSGFGKDRSSWCRHP-FGGRGNSGPPP---KG-RVCKFYESGHCKKGASCDYLH 536
GDSG+G R W R P FG RG P KG RVCKF+ESGHCKKG+ CDYLH
Sbjct: 1728 GDSGYGGGRP-WNRQPSFGSRGGDSSRPHFNKGQRVCKFHESGHCKKGSQCDYLH 1781