BLASTX nr result

ID: Atropa21_contig00016357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00016357
         (713 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006342020.1| PREDICTED: probable transcription factor Pos...   113   7e-23
ref|XP_006342019.1| PREDICTED: probable transcription factor Pos...   113   7e-23
emb|CAA05898.1| transcription factor VSF-1 [Solanum lycopersicum]     108   1e-21
ref|NP_001234548.1| vsf-1 protein [Solanum lycopersicum] gi|1838...   105   1e-20
gb|EMJ22998.1| hypothetical protein PRUPE_ppa003452mg [Prunus pe...    69   2e-09
ref|XP_004291397.1| PREDICTED: uncharacterized protein LOC101292...    59   2e-06

>ref|XP_006342020.1| PREDICTED: probable transcription factor PosF21-like isoform X2
           [Solanum tuberosum]
          Length = 424

 Score =  113 bits (282), Expect = 7e-23
 Identities = 71/103 (68%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
 Frame = -2

Query: 304 MAQSNSKPPMS-HNFGVGA-SHVRSLSQPSIFANXXXXXXXXXXPIEPSMVSPHSSLKDT 131
           MAQSNSKPPMS HNFGVGA SHVRSLSQ SIF+N          P EP MVS HSSLKD 
Sbjct: 1   MAQSNSKPPMSGHNFGVGAASHVRSLSQSSIFSNSCLPPLSPFPPSEPGMVSGHSSLKDI 60

Query: 130 YMEEVDVNSQGGPTAVSSFTTRENTFWGSDGLPPRKGHRRSNS 2
            MEEVDVNSQ G   VSSFT         DGLPPRKGHRRSNS
Sbjct: 61  SMEEVDVNSQ-GLGVVSSFT--------RDGLPPRKGHRRSNS 94


>ref|XP_006342019.1| PREDICTED: probable transcription factor PosF21-like isoform X1
           [Solanum tuberosum]
          Length = 444

 Score =  113 bits (282), Expect = 7e-23
 Identities = 71/103 (68%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
 Frame = -2

Query: 304 MAQSNSKPPMS-HNFGVGA-SHVRSLSQPSIFANXXXXXXXXXXPIEPSMVSPHSSLKDT 131
           MAQSNSKPPMS HNFGVGA SHVRSLSQ SIF+N          P EP MVS HSSLKD 
Sbjct: 1   MAQSNSKPPMSGHNFGVGAASHVRSLSQSSIFSNSCLPPLSPFPPSEPGMVSGHSSLKDI 60

Query: 130 YMEEVDVNSQGGPTAVSSFTTRENTFWGSDGLPPRKGHRRSNS 2
            MEEVDVNSQ G   VSSFT         DGLPPRKGHRRSNS
Sbjct: 61  SMEEVDVNSQ-GLGVVSSFT--------RDGLPPRKGHRRSNS 94


>emb|CAA05898.1| transcription factor VSF-1 [Solanum lycopersicum]
          Length = 444

 Score =  108 bits (271), Expect = 1e-21
 Identities = 69/103 (66%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
 Frame = -2

Query: 304 MAQSNSKPPMS-HNFGVGA-SHVRSLSQPSIFANXXXXXXXXXXPIEPSMVSPHSSLKDT 131
           MAQSNSKPPMS  NFGVGA SHVRSLSQ SIF+N          P EP MVS HSSLKD 
Sbjct: 1   MAQSNSKPPMSSQNFGVGAVSHVRSLSQSSIFSNSCLPPLSPFPPSEPGMVSGHSSLKDI 60

Query: 130 YMEEVDVNSQGGPTAVSSFTTRENTFWGSDGLPPRKGHRRSNS 2
            MEE DVNSQ G   VSSFT         DGLPPRKGHRRSNS
Sbjct: 61  SMEEADVNSQ-GVGVVSSFT--------RDGLPPRKGHRRSNS 94


>ref|NP_001234548.1| vsf-1 protein [Solanum lycopersicum] gi|1838976|emb|CAA52015.1|
           vsf-1 [Solanum lycopersicum]
          Length = 444

 Score =  105 bits (263), Expect = 1e-20
 Identities = 68/103 (66%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
 Frame = -2

Query: 304 MAQSNSKPPMS-HNFGVGA-SHVRSLSQPSIFANXXXXXXXXXXPIEPSMVSPHSSLKDT 131
           MAQSNSKPPMS  NFGVGA SHVRSLSQ SIF+N          P EP MVS  SSLKD 
Sbjct: 1   MAQSNSKPPMSSQNFGVGAVSHVRSLSQSSIFSNSCLPPLSPFPPSEPGMVSGRSSLKDI 60

Query: 130 YMEEVDVNSQGGPTAVSSFTTRENTFWGSDGLPPRKGHRRSNS 2
            MEE DVNSQ G   VSSFT         DGLPPRKGHRRSNS
Sbjct: 61  SMEEADVNSQ-GVGVVSSFT--------RDGLPPRKGHRRSNS 94


>gb|EMJ22998.1| hypothetical protein PRUPE_ppa003452mg [Prunus persica]
          Length = 573

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 47/106 (44%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
 Frame = -2

Query: 310 IVMAQSNSKPPMSHNFGVGASHVRSLSQPSIFANXXXXXXXXXXPIEPSMVS---PHSSL 140
           I+  QS S      N     SH RSLSQPS F+             EPS  S   P+S  
Sbjct: 79  IMRPQSGSWQLGPQNLSSVPSHTRSLSQPSFFSLNSLPPLSPLPYREPSSSSLSDPNSV- 137

Query: 139 KDTYMEEVDVNSQGGPTAVSSFTTRENTFWGSDGLPPRKGHRRSNS 2
            D  M+E  VNS   P+  S  TT  N FW  DGLPPR+GHRRSNS
Sbjct: 138 -DVSMDETVVNSHA-PSLRSPVTTDSNAFWAGDGLPPRRGHRRSNS 181


>ref|XP_004291397.1| PREDICTED: uncharacterized protein LOC101292368 [Fragaria vesca
           subsp. vesca]
          Length = 552

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
 Frame = -2

Query: 256 GASHVRSLSQPSIFA-NXXXXXXXXXXPIEP---SMVSPHSSLKDTYMEEVDVNSQGGPT 89
           G++H RSLSQP+ F+ +            EP   S+  P+S+  D  MEE  VNS     
Sbjct: 88  GSAHSRSLSQPAFFSLDSLPPLSPLTSYREPTASSLSDPNSA--DVNMEESVVNSHA--Q 143

Query: 88  AVSSFTTRENTFWGSDGLPPRKGHRRSNS 2
           ++ S  T  N FW  DGLPPR+GHRRSNS
Sbjct: 144 SMRSPVTDGNPFWAGDGLPPRRGHRRSNS 172


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