BLASTX nr result
ID: Atropa21_contig00016253
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00016253 (491 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519449.1| WD-repeat protein, putative [Ricinus communi... 56 5e-09 ref|XP_006414494.1| hypothetical protein EUTSA_v10024329mg [Eutr... 54 2e-07 gb|EXB75908.1| WD repeat-containing protein 3 [Morus notabilis] 51 2e-07 gb|EOY07983.1| Transducin family protein / WD-40 repeat family p... 50 4e-07 ref|XP_002326214.1| predicted protein [Populus trichocarpa] gi|5... 52 6e-07 ref|XP_006338893.1| PREDICTED: WD repeat-containing protein 3-li... 52 9e-07 ref|XP_006296915.1| hypothetical protein CARUB_v10012907mg [Caps... 53 1e-06 ref|XP_002885447.1| transducin family protein [Arabidopsis lyrat... 50 6e-06 ref|XP_004248528.1| PREDICTED: WD repeat-containing protein 3-li... 50 7e-06 >ref|XP_002519449.1| WD-repeat protein, putative [Ricinus communis] gi|223541312|gb|EEF42863.1| WD-repeat protein, putative [Ricinus communis] Length = 950 Score = 56.2 bits (134), Expect(2) = 5e-09 Identities = 27/35 (77%), Positives = 32/35 (91%) Frame = -2 Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284 +QLM+S+SDAPFRDAKTKLLEIRS+ +KR EAR D Sbjct: 903 KQLMASKSDAPFRDAKTKLLEIRSQQSKRLEARTD 937 Score = 29.6 bits (65), Expect(2) = 5e-09 Identities = 13/18 (72%), Positives = 17/18 (94%) Frame = -3 Query: 489 SARPLLTQLKDILHARVE 436 +ARP+LT LKDIL+ARV+ Sbjct: 869 AARPVLTVLKDILYARVQ 886 >ref|XP_006414494.1| hypothetical protein EUTSA_v10024329mg [Eutrema salsugineum] gi|557115664|gb|ESQ55947.1| hypothetical protein EUTSA_v10024329mg [Eutrema salsugineum] Length = 955 Score = 53.5 bits (127), Expect(2) = 2e-07 Identities = 25/35 (71%), Positives = 30/35 (85%) Frame = -2 Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284 +Q+M+SRSDAPFRDAK KL+EIRS+ KR EAR D Sbjct: 897 KQMMASRSDAPFRDAKAKLMEIRSQQAKRMEARLD 931 Score = 27.3 bits (59), Expect(2) = 2e-07 Identities = 11/18 (61%), Positives = 16/18 (88%) Frame = -3 Query: 489 SARPLLTQLKDILHARVE 436 +ARP+L+ L+DILHA V+ Sbjct: 863 AARPILSVLRDILHANVK 880 >gb|EXB75908.1| WD repeat-containing protein 3 [Morus notabilis] Length = 944 Score = 51.2 bits (121), Expect(2) = 2e-07 Identities = 25/35 (71%), Positives = 32/35 (91%) Frame = -2 Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284 +QLM+SRSDA F+DAK+KLLEIRS+++KR EAR D Sbjct: 897 KQLMASRSDALFKDAKSKLLEIRSQHSKRLEARTD 931 Score = 29.3 bits (64), Expect(2) = 2e-07 Identities = 12/18 (66%), Positives = 17/18 (94%) Frame = -3 Query: 489 SARPLLTQLKDILHARVE 436 +ARP+LT LKDIL+AR++ Sbjct: 863 TARPVLTALKDILYARIK 880 >gb|EOY07983.1| Transducin family protein / WD-40 repeat family protein isoform 1 [Theobroma cacao] Length = 944 Score = 50.4 bits (119), Expect(2) = 4e-07 Identities = 25/35 (71%), Positives = 31/35 (88%) Frame = -2 Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284 +QLM+SRSDA FRDAK+KLLEIRS+ +KR EAR + Sbjct: 897 KQLMASRSDALFRDAKSKLLEIRSQQSKRLEARTE 931 Score = 28.9 bits (63), Expect(2) = 4e-07 Identities = 13/18 (72%), Positives = 17/18 (94%) Frame = -3 Query: 489 SARPLLTQLKDILHARVE 436 SARP+LT LK+IL+ARV+ Sbjct: 863 SARPVLTVLKEILYARVK 880 >ref|XP_002326214.1| predicted protein [Populus trichocarpa] gi|566175883|ref|XP_006381372.1| transducin family protein [Populus trichocarpa] gi|550336075|gb|ERP59169.1| transducin family protein [Populus trichocarpa] Length = 959 Score = 51.6 bits (122), Expect(2) = 6e-07 Identities = 26/35 (74%), Positives = 30/35 (85%) Frame = -2 Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284 +QLM+SRSDA FRDAK KLLEIRS+ +KR EAR D Sbjct: 902 KQLMASRSDALFRDAKAKLLEIRSQQSKRLEARTD 936 Score = 27.3 bits (59), Expect(2) = 6e-07 Identities = 12/18 (66%), Positives = 16/18 (88%) Frame = -3 Query: 489 SARPLLTQLKDILHARVE 436 +ARP+LT LKDIL+ RV+ Sbjct: 868 AARPVLTLLKDILYERVK 885 >ref|XP_006338893.1| PREDICTED: WD repeat-containing protein 3-like [Solanum tuberosum] Length = 950 Score = 51.6 bits (122), Expect(2) = 9e-07 Identities = 26/34 (76%), Positives = 27/34 (79%) Frame = -2 Query: 385 QLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284 QL+SSRSDA FRD KTKLLEIRS N KR E R D Sbjct: 896 QLVSSRSDAVFRDEKTKLLEIRSHNAKRTEERED 929 Score = 26.6 bits (57), Expect(2) = 9e-07 Identities = 12/18 (66%), Positives = 16/18 (88%) Frame = -3 Query: 489 SARPLLTQLKDILHARVE 436 SARPL+T+L DIL A+V+ Sbjct: 861 SARPLITRLGDILPAKVK 878 >ref|XP_006296915.1| hypothetical protein CARUB_v10012907mg [Capsella rubella] gi|482565624|gb|EOA29813.1| hypothetical protein CARUB_v10012907mg [Capsella rubella] Length = 954 Score = 53.1 bits (126), Expect(2) = 1e-06 Identities = 24/35 (68%), Positives = 31/35 (88%) Frame = -2 Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284 +Q+M+SRSDAPF+DAK KL+EIRS+ KR E+RAD Sbjct: 897 KQMMASRSDAPFKDAKAKLMEIRSQQAKRMESRAD 931 Score = 24.6 bits (52), Expect(2) = 1e-06 Identities = 9/18 (50%), Positives = 17/18 (94%) Frame = -3 Query: 489 SARPLLTQLKDILHARVE 436 SARP+L+ L+DIL+++++ Sbjct: 863 SARPVLSILRDILYSKIK 880 >ref|XP_002885447.1| transducin family protein [Arabidopsis lyrata subsp. lyrata] gi|297331287|gb|EFH61706.1| transducin family protein [Arabidopsis lyrata subsp. lyrata] Length = 954 Score = 50.4 bits (119), Expect(2) = 6e-06 Identities = 23/35 (65%), Positives = 29/35 (82%) Frame = -2 Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284 +Q+M SRSDAPF+DAK KL+EIRS+ KR +RAD Sbjct: 896 KQMMDSRSDAPFKDAKAKLMEIRSQQAKRMASRAD 930 Score = 25.0 bits (53), Expect(2) = 6e-06 Identities = 9/18 (50%), Positives = 17/18 (94%) Frame = -3 Query: 489 SARPLLTQLKDILHARVE 436 SARP+L+ L+DIL+++++ Sbjct: 862 SARPVLSVLRDILYSKIK 879 >ref|XP_004248528.1| PREDICTED: WD repeat-containing protein 3-like [Solanum lycopersicum] Length = 950 Score = 50.1 bits (118), Expect(2) = 7e-06 Identities = 25/34 (73%), Positives = 26/34 (76%) Frame = -2 Query: 385 QLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284 Q MSSRSDA FRD KTKLLEIR+ N KR E R D Sbjct: 896 QFMSSRSDAVFRDKKTKLLEIRAHNDKRTEERED 929 Score = 25.0 bits (53), Expect(2) = 7e-06 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -3 Query: 489 SARPLLTQLKDILHARVE 436 SARPL+T+L D L A+V+ Sbjct: 861 SARPLITRLSDSLAAKVK 878