BLASTX nr result

ID: Atropa21_contig00016253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00016253
         (491 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519449.1| WD-repeat protein, putative [Ricinus communi...    56   5e-09
ref|XP_006414494.1| hypothetical protein EUTSA_v10024329mg [Eutr...    54   2e-07
gb|EXB75908.1| WD repeat-containing protein 3 [Morus notabilis]        51   2e-07
gb|EOY07983.1| Transducin family protein / WD-40 repeat family p...    50   4e-07
ref|XP_002326214.1| predicted protein [Populus trichocarpa] gi|5...    52   6e-07
ref|XP_006338893.1| PREDICTED: WD repeat-containing protein 3-li...    52   9e-07
ref|XP_006296915.1| hypothetical protein CARUB_v10012907mg [Caps...    53   1e-06
ref|XP_002885447.1| transducin family protein [Arabidopsis lyrat...    50   6e-06
ref|XP_004248528.1| PREDICTED: WD repeat-containing protein 3-li...    50   7e-06

>ref|XP_002519449.1| WD-repeat protein, putative [Ricinus communis]
            gi|223541312|gb|EEF42863.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 950

 Score = 56.2 bits (134), Expect(2) = 5e-09
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = -2

Query: 388  QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
            +QLM+S+SDAPFRDAKTKLLEIRS+ +KR EAR D
Sbjct: 903  KQLMASKSDAPFRDAKTKLLEIRSQQSKRLEARTD 937



 Score = 29.6 bits (65), Expect(2) = 5e-09
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = -3

Query: 489 SARPLLTQLKDILHARVE 436
           +ARP+LT LKDIL+ARV+
Sbjct: 869 AARPVLTVLKDILYARVQ 886


>ref|XP_006414494.1| hypothetical protein EUTSA_v10024329mg [Eutrema salsugineum]
            gi|557115664|gb|ESQ55947.1| hypothetical protein
            EUTSA_v10024329mg [Eutrema salsugineum]
          Length = 955

 Score = 53.5 bits (127), Expect(2) = 2e-07
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = -2

Query: 388  QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
            +Q+M+SRSDAPFRDAK KL+EIRS+  KR EAR D
Sbjct: 897  KQMMASRSDAPFRDAKAKLMEIRSQQAKRMEARLD 931



 Score = 27.3 bits (59), Expect(2) = 2e-07
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -3

Query: 489 SARPLLTQLKDILHARVE 436
           +ARP+L+ L+DILHA V+
Sbjct: 863 AARPILSVLRDILHANVK 880


>gb|EXB75908.1| WD repeat-containing protein 3 [Morus notabilis]
          Length = 944

 Score = 51.2 bits (121), Expect(2) = 2e-07
 Identities = 25/35 (71%), Positives = 32/35 (91%)
 Frame = -2

Query: 388  QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
            +QLM+SRSDA F+DAK+KLLEIRS+++KR EAR D
Sbjct: 897  KQLMASRSDALFKDAKSKLLEIRSQHSKRLEARTD 931



 Score = 29.3 bits (64), Expect(2) = 2e-07
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = -3

Query: 489 SARPLLTQLKDILHARVE 436
           +ARP+LT LKDIL+AR++
Sbjct: 863 TARPVLTALKDILYARIK 880


>gb|EOY07983.1| Transducin family protein / WD-40 repeat family protein isoform 1
            [Theobroma cacao]
          Length = 944

 Score = 50.4 bits (119), Expect(2) = 4e-07
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = -2

Query: 388  QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
            +QLM+SRSDA FRDAK+KLLEIRS+ +KR EAR +
Sbjct: 897  KQLMASRSDALFRDAKSKLLEIRSQQSKRLEARTE 931



 Score = 28.9 bits (63), Expect(2) = 4e-07
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = -3

Query: 489 SARPLLTQLKDILHARVE 436
           SARP+LT LK+IL+ARV+
Sbjct: 863 SARPVLTVLKEILYARVK 880


>ref|XP_002326214.1| predicted protein [Populus trichocarpa]
            gi|566175883|ref|XP_006381372.1| transducin family
            protein [Populus trichocarpa] gi|550336075|gb|ERP59169.1|
            transducin family protein [Populus trichocarpa]
          Length = 959

 Score = 51.6 bits (122), Expect(2) = 6e-07
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = -2

Query: 388  QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
            +QLM+SRSDA FRDAK KLLEIRS+ +KR EAR D
Sbjct: 902  KQLMASRSDALFRDAKAKLLEIRSQQSKRLEARTD 936



 Score = 27.3 bits (59), Expect(2) = 6e-07
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = -3

Query: 489 SARPLLTQLKDILHARVE 436
           +ARP+LT LKDIL+ RV+
Sbjct: 868 AARPVLTLLKDILYERVK 885


>ref|XP_006338893.1| PREDICTED: WD repeat-containing protein 3-like [Solanum tuberosum]
          Length = 950

 Score = 51.6 bits (122), Expect(2) = 9e-07
 Identities = 26/34 (76%), Positives = 27/34 (79%)
 Frame = -2

Query: 385 QLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
           QL+SSRSDA FRD KTKLLEIRS N KR E R D
Sbjct: 896 QLVSSRSDAVFRDEKTKLLEIRSHNAKRTEERED 929



 Score = 26.6 bits (57), Expect(2) = 9e-07
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = -3

Query: 489 SARPLLTQLKDILHARVE 436
           SARPL+T+L DIL A+V+
Sbjct: 861 SARPLITRLGDILPAKVK 878


>ref|XP_006296915.1| hypothetical protein CARUB_v10012907mg [Capsella rubella]
            gi|482565624|gb|EOA29813.1| hypothetical protein
            CARUB_v10012907mg [Capsella rubella]
          Length = 954

 Score = 53.1 bits (126), Expect(2) = 1e-06
 Identities = 24/35 (68%), Positives = 31/35 (88%)
 Frame = -2

Query: 388  QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
            +Q+M+SRSDAPF+DAK KL+EIRS+  KR E+RAD
Sbjct: 897  KQMMASRSDAPFKDAKAKLMEIRSQQAKRMESRAD 931



 Score = 24.6 bits (52), Expect(2) = 1e-06
 Identities = 9/18 (50%), Positives = 17/18 (94%)
 Frame = -3

Query: 489 SARPLLTQLKDILHARVE 436
           SARP+L+ L+DIL+++++
Sbjct: 863 SARPVLSILRDILYSKIK 880


>ref|XP_002885447.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297331287|gb|EFH61706.1| transducin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 954

 Score = 50.4 bits (119), Expect(2) = 6e-06
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = -2

Query: 388  QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
            +Q+M SRSDAPF+DAK KL+EIRS+  KR  +RAD
Sbjct: 896  KQMMDSRSDAPFKDAKAKLMEIRSQQAKRMASRAD 930



 Score = 25.0 bits (53), Expect(2) = 6e-06
 Identities = 9/18 (50%), Positives = 17/18 (94%)
 Frame = -3

Query: 489 SARPLLTQLKDILHARVE 436
           SARP+L+ L+DIL+++++
Sbjct: 862 SARPVLSVLRDILYSKIK 879


>ref|XP_004248528.1| PREDICTED: WD repeat-containing protein 3-like [Solanum
           lycopersicum]
          Length = 950

 Score = 50.1 bits (118), Expect(2) = 7e-06
 Identities = 25/34 (73%), Positives = 26/34 (76%)
 Frame = -2

Query: 385 QLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
           Q MSSRSDA FRD KTKLLEIR+ N KR E R D
Sbjct: 896 QFMSSRSDAVFRDKKTKLLEIRAHNDKRTEERED 929



 Score = 25.0 bits (53), Expect(2) = 7e-06
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -3

Query: 489 SARPLLTQLKDILHARVE 436
           SARPL+T+L D L A+V+
Sbjct: 861 SARPLITRLSDSLAAKVK 878


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