BLASTX nr result
ID: Atropa21_contig00016253
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00016253
(491 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519449.1| WD-repeat protein, putative [Ricinus communi... 56 5e-09
ref|XP_006414494.1| hypothetical protein EUTSA_v10024329mg [Eutr... 54 2e-07
gb|EXB75908.1| WD repeat-containing protein 3 [Morus notabilis] 51 2e-07
gb|EOY07983.1| Transducin family protein / WD-40 repeat family p... 50 4e-07
ref|XP_002326214.1| predicted protein [Populus trichocarpa] gi|5... 52 6e-07
ref|XP_006338893.1| PREDICTED: WD repeat-containing protein 3-li... 52 9e-07
ref|XP_006296915.1| hypothetical protein CARUB_v10012907mg [Caps... 53 1e-06
ref|XP_002885447.1| transducin family protein [Arabidopsis lyrat... 50 6e-06
ref|XP_004248528.1| PREDICTED: WD repeat-containing protein 3-li... 50 7e-06
>ref|XP_002519449.1| WD-repeat protein, putative [Ricinus communis]
gi|223541312|gb|EEF42863.1| WD-repeat protein, putative
[Ricinus communis]
Length = 950
Score = 56.2 bits (134), Expect(2) = 5e-09
Identities = 27/35 (77%), Positives = 32/35 (91%)
Frame = -2
Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
+QLM+S+SDAPFRDAKTKLLEIRS+ +KR EAR D
Sbjct: 903 KQLMASKSDAPFRDAKTKLLEIRSQQSKRLEARTD 937
Score = 29.6 bits (65), Expect(2) = 5e-09
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -3
Query: 489 SARPLLTQLKDILHARVE 436
+ARP+LT LKDIL+ARV+
Sbjct: 869 AARPVLTVLKDILYARVQ 886
>ref|XP_006414494.1| hypothetical protein EUTSA_v10024329mg [Eutrema salsugineum]
gi|557115664|gb|ESQ55947.1| hypothetical protein
EUTSA_v10024329mg [Eutrema salsugineum]
Length = 955
Score = 53.5 bits (127), Expect(2) = 2e-07
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -2
Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
+Q+M+SRSDAPFRDAK KL+EIRS+ KR EAR D
Sbjct: 897 KQMMASRSDAPFRDAKAKLMEIRSQQAKRMEARLD 931
Score = 27.3 bits (59), Expect(2) = 2e-07
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -3
Query: 489 SARPLLTQLKDILHARVE 436
+ARP+L+ L+DILHA V+
Sbjct: 863 AARPILSVLRDILHANVK 880
>gb|EXB75908.1| WD repeat-containing protein 3 [Morus notabilis]
Length = 944
Score = 51.2 bits (121), Expect(2) = 2e-07
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = -2
Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
+QLM+SRSDA F+DAK+KLLEIRS+++KR EAR D
Sbjct: 897 KQLMASRSDALFKDAKSKLLEIRSQHSKRLEARTD 931
Score = 29.3 bits (64), Expect(2) = 2e-07
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = -3
Query: 489 SARPLLTQLKDILHARVE 436
+ARP+LT LKDIL+AR++
Sbjct: 863 TARPVLTALKDILYARIK 880
>gb|EOY07983.1| Transducin family protein / WD-40 repeat family protein isoform 1
[Theobroma cacao]
Length = 944
Score = 50.4 bits (119), Expect(2) = 4e-07
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = -2
Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
+QLM+SRSDA FRDAK+KLLEIRS+ +KR EAR +
Sbjct: 897 KQLMASRSDALFRDAKSKLLEIRSQQSKRLEARTE 931
Score = 28.9 bits (63), Expect(2) = 4e-07
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -3
Query: 489 SARPLLTQLKDILHARVE 436
SARP+LT LK+IL+ARV+
Sbjct: 863 SARPVLTVLKEILYARVK 880
>ref|XP_002326214.1| predicted protein [Populus trichocarpa]
gi|566175883|ref|XP_006381372.1| transducin family
protein [Populus trichocarpa] gi|550336075|gb|ERP59169.1|
transducin family protein [Populus trichocarpa]
Length = 959
Score = 51.6 bits (122), Expect(2) = 6e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -2
Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
+QLM+SRSDA FRDAK KLLEIRS+ +KR EAR D
Sbjct: 902 KQLMASRSDALFRDAKAKLLEIRSQQSKRLEARTD 936
Score = 27.3 bits (59), Expect(2) = 6e-07
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3
Query: 489 SARPLLTQLKDILHARVE 436
+ARP+LT LKDIL+ RV+
Sbjct: 868 AARPVLTLLKDILYERVK 885
>ref|XP_006338893.1| PREDICTED: WD repeat-containing protein 3-like [Solanum tuberosum]
Length = 950
Score = 51.6 bits (122), Expect(2) = 9e-07
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = -2
Query: 385 QLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
QL+SSRSDA FRD KTKLLEIRS N KR E R D
Sbjct: 896 QLVSSRSDAVFRDEKTKLLEIRSHNAKRTEERED 929
Score = 26.6 bits (57), Expect(2) = 9e-07
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3
Query: 489 SARPLLTQLKDILHARVE 436
SARPL+T+L DIL A+V+
Sbjct: 861 SARPLITRLGDILPAKVK 878
>ref|XP_006296915.1| hypothetical protein CARUB_v10012907mg [Capsella rubella]
gi|482565624|gb|EOA29813.1| hypothetical protein
CARUB_v10012907mg [Capsella rubella]
Length = 954
Score = 53.1 bits (126), Expect(2) = 1e-06
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = -2
Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
+Q+M+SRSDAPF+DAK KL+EIRS+ KR E+RAD
Sbjct: 897 KQMMASRSDAPFKDAKAKLMEIRSQQAKRMESRAD 931
Score = 24.6 bits (52), Expect(2) = 1e-06
Identities = 9/18 (50%), Positives = 17/18 (94%)
Frame = -3
Query: 489 SARPLLTQLKDILHARVE 436
SARP+L+ L+DIL+++++
Sbjct: 863 SARPVLSILRDILYSKIK 880
>ref|XP_002885447.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297331287|gb|EFH61706.1| transducin family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 954
Score = 50.4 bits (119), Expect(2) = 6e-06
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 388 QQLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
+Q+M SRSDAPF+DAK KL+EIRS+ KR +RAD
Sbjct: 896 KQMMDSRSDAPFKDAKAKLMEIRSQQAKRMASRAD 930
Score = 25.0 bits (53), Expect(2) = 6e-06
Identities = 9/18 (50%), Positives = 17/18 (94%)
Frame = -3
Query: 489 SARPLLTQLKDILHARVE 436
SARP+L+ L+DIL+++++
Sbjct: 862 SARPVLSVLRDILYSKIK 879
>ref|XP_004248528.1| PREDICTED: WD repeat-containing protein 3-like [Solanum
lycopersicum]
Length = 950
Score = 50.1 bits (118), Expect(2) = 7e-06
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -2
Query: 385 QLMSSRSDAPFRDAKTKLLEIRSRNTKRNEARAD 284
Q MSSRSDA FRD KTKLLEIR+ N KR E R D
Sbjct: 896 QFMSSRSDAVFRDKKTKLLEIRAHNDKRTEERED 929
Score = 25.0 bits (53), Expect(2) = 7e-06
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -3
Query: 489 SARPLLTQLKDILHARVE 436
SARPL+T+L D L A+V+
Sbjct: 861 SARPLITRLSDSLAAKVK 878