BLASTX nr result
ID: Atropa21_contig00016242
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00016242 (635 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABB55379.1| unknown [Solanum tuberosum] 54 5e-10 ref|XP_006350257.1| PREDICTED: neurofilament heavy polypeptide-l... 63 6e-08 ref|XP_004236656.1| PREDICTED: uncharacterized protein LOC101257... 63 6e-08 >gb|ABB55379.1| unknown [Solanum tuberosum] Length = 196 Score = 54.3 bits (129), Expect(2) = 5e-10 Identities = 26/40 (65%), Positives = 30/40 (75%) Frame = +1 Query: 190 GRSQAHNHTSSYRNMGRAVWVPVFRDTDNMGPRYNNIAHN 309 G ++AH HTSSYR M RAV V VFR+T N G RYN IAH+ Sbjct: 2 GPARAHIHTSSYRGMERAVGVQVFRNTGNTGHRYNGIAHS 41 Score = 35.8 bits (81), Expect(2) = 5e-10 Identities = 21/37 (56%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +3 Query: 369 SDIHGVATIAA-VGPXXXXXXXXXXXXXXXITVGFSC 476 SDIHGVATIAA VGP ITVGFSC Sbjct: 61 SDIHGVATIAADVGPSLGFSGSFGLSLGLSITVGFSC 97 >ref|XP_006350257.1| PREDICTED: neurofilament heavy polypeptide-like [Solanum tuberosum] Length = 260 Score = 63.2 bits (152), Expect = 6e-08 Identities = 43/102 (42%), Positives = 46/102 (45%), Gaps = 1/102 (0%) Frame = -2 Query: 409 GPT-AAMVATPWMSEXXXXXXXPVQGYPQAAHXXXXXXXXXXXXXXXXYHGTPVPTQPAX 233 GPT AAMVATPW+SE V GYPQA Y+GTPVP QPA Sbjct: 162 GPTSAAMVATPWISEPMMMMPP-VHGYPQAMPGCGCGQCHYTGGPCYQYYGTPVPPQPAP 220 Query: 232 XXXXXXXXXXXXXXXXXXXXXXGCYVNNDYFNEENAQGCTIM 107 Y NNDY+NEEN QGCTIM Sbjct: 221 YHGNYSYGYGPGPGPSSYGKGY--YGNNDYYNEENGQGCTIM 260 >ref|XP_004236656.1| PREDICTED: uncharacterized protein LOC101257948 [Solanum lycopersicum] Length = 266 Score = 63.2 bits (152), Expect = 6e-08 Identities = 40/101 (39%), Positives = 45/101 (44%) Frame = -2 Query: 409 GPTAAMVATPWMSEXXXXXXXPVQGYPQAAHXXXXXXXXXXXXXXXXYHGTPVPTQPAXX 230 GPT+AMVATPW+SE V GYPQ Y+GTPVP QPA Sbjct: 169 GPTSAMVATPWISEPIMMMPP-VHGYPQVMPSCGCGQCHYTGGPCYQYYGTPVPPQPAPY 227 Query: 229 XXXXXXXXXXXXXXXXXXXXXGCYVNNDYFNEENAQGCTIM 107 Y NNDY+NEE+ QGCTIM Sbjct: 228 YGNYSYGYGPGPGPSSYGKGY--YGNNDYYNEEDGQGCTIM 266