BLASTX nr result
ID: Atropa21_contig00016241
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00016241 (704 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578... 92 2e-36 ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777... 73 5e-31 gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza... 78 4e-30 gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat... 78 4e-30 gb|ABB47941.2| retrotransposon protein, putative, unclassified [... 78 4e-30 gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp... 72 9e-29 gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja... 77 6e-21 emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 65 1e-19 gb|AEJ07955.1| putative polyprotein [Sorghum propinquum] 78 1e-18 gb|EMS54188.1| Putative late blight resistance protein-like prot... 64 4e-18 gb|ADB85253.1| putative retrotransposon protein [Phyllostachys e... 69 8e-18 gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group] 64 1e-16 gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subc... 62 2e-16 gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc... 58 2e-16 ref|XP_006582651.1| PREDICTED: uncharacterized mitochondrial pro... 91 3e-16 gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group... 70 4e-16 emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group] 43 8e-16 emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 61 8e-16 gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 51 2e-15 gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha... 55 3e-15 >ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578284 [Solanum tuberosum] Length = 614 Score = 91.7 bits (226), Expect(2) = 2e-36 Identities = 47/81 (58%), Positives = 58/81 (71%) Frame = +3 Query: 3 GFSVKDFRTEMILMRCESWGEFYPITTTIANN*SIPLTFTALAPSL*HERLGHLGSSILD 182 GF VKDF+T +MRCES G+ YPIT N + P TF ALAPSL H+RLGH G+ +L+ Sbjct: 469 GFPVKDFQTGRPVMRCESRGKLYPIT----NPRAFPSTFAALAPSLWHDRLGHPGAPVLN 524 Query: 183 SLRKNKFIECNRLRRSIFCSS 245 SLRKNK IECN+++ S C S Sbjct: 525 SLRKNKLIECNQIKDSRICHS 545 Score = 88.2 bits (217), Expect(2) = 2e-36 Identities = 42/60 (70%), Positives = 48/60 (80%) Frame = +1 Query: 247 PLGKQVKLSFISSNSSTMLPFDIIHSDIWTSPVLSYLGHRYYVLFLDDYSNFLWTFSLSK 426 PLGK VKLSF +SNSST++PFDIIHSD+WTS VLS GHRYYVLF+DD+S F F K Sbjct: 547 PLGKHVKLSFYASNSSTIMPFDIIHSDLWTSLVLSSSGHRYYVLFVDDHSKFCGHFLYRK 606 >ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777861 [Setaria italica] Length = 2179 Score = 73.2 bits (178), Expect(3) = 5e-31 Identities = 31/60 (51%), Positives = 44/60 (73%) Frame = +1 Query: 250 LGKQVKLSFISSNSSTMLPFDIIHSDIWTSPVLSYLGHRYYVLFLDDYSNFLWTFSLSKK 429 LG+ V+L F SNS + PFD+IH D+WTSPV+S G++YY++ LDD +++ WTF L K Sbjct: 609 LGRHVRLPFSVSNSRAIHPFDLIHCDLWTSPVVSVSGYKYYLVILDDCTHYTWTFPLRLK 668 Score = 54.7 bits (130), Expect(3) = 5e-31 Identities = 25/49 (51%), Positives = 32/49 (65%) Frame = +3 Query: 465 IRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGK 611 +RT F+ IK +QCDN REFD+ R F T+ + FR SCP T QNG+ Sbjct: 682 VRTQFDSTIKAVQCDNGREFDHSSARTFFLTHGVVFRMSCPYTSQQNGR 730 Score = 53.9 bits (128), Expect(3) = 5e-31 Identities = 29/79 (36%), Positives = 40/79 (50%) Frame = +3 Query: 3 GFSVKDFRTEMILMRCESWGEFYPITTTIANN*SIPLTFTALAPSL*HERLGHLGSSILD 182 G SVKD +T ++ RC S G+ YP ++ + LT + SL H RLGHLG + L Sbjct: 527 GLSVKDLQTRSVIARCNSTGDLYPFFPAPSST-TAALTTATSSTSLWHRRLGHLGHAALF 585 Query: 183 SLRKNKFIECNRLRRSIFC 239 L + I CN+ C Sbjct: 586 QLISSNVISCNKHNTDHVC 604 >gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group] Length = 1803 Score = 78.2 bits (191), Expect(4) = 4e-30 Identities = 31/68 (45%), Positives = 50/68 (73%) Frame = +1 Query: 250 LGKQVKLSFISSNSSTMLPFDIIHSDIWTSPVLSYLGHRYYVLFLDDYSNFLWTFSLSKK 429 +G V+L F SS+S T+ PF ++H+D+WTSP+ S G++YYV+FLDD+++++WTF + K Sbjct: 536 VGTNVRLPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYYVVFLDDFTHYIWTFPVRNK 595 Query: 430 *YFSHS*R 453 H+ R Sbjct: 596 SEVFHTVR 603 Score = 44.3 bits (103), Expect(4) = 4e-30 Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Frame = +3 Query: 3 GFSVKDFRTEMILMRCESWGEFYPITTTIANN*SIPLTFTALAPSL--*HERLGHLGSSI 176 GFS+KD +T+++ +RC+S G+ YP+ + L+ T+ +PS+ H RLGH GS+ Sbjct: 457 GFSIKDLQTQVVKLRCDSPGDLYPLRLPSPH----ALSATS-SPSVEHWHLRLGHPGSAS 511 Query: 177 LDSLRKNKFIECNR 218 L + + +CN+ Sbjct: 512 LSKVLGSFDFQCNK 525 Score = 40.8 bits (94), Expect(4) = 4e-30 Identities = 18/32 (56%), Positives = 24/32 (75%) Frame = +2 Query: 608 EAERKIHTINNIVRTLLAHASLPPSFWHHALQ 703 +AER + TIN+ VRT+L H++ P SFW ALQ Sbjct: 657 KAERILRTINDCVRTMLVHSAAPLSFWAEALQ 688 Score = 35.0 bits (79), Expect(4) = 4e-30 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Frame = +3 Query: 444 FLTVR---ALIRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGK 611 F TVR A T F + +Q DN +E+D+ R + + R SCP + QNGK Sbjct: 599 FHTVRSFFAYAHTQFGLPVLALQTDNGKEYDSYALRSLLSLHGAVLRLSCPYSSQQNGK 657 >gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group] Length = 1417 Score = 78.2 bits (191), Expect(4) = 4e-30 Identities = 31/68 (45%), Positives = 50/68 (73%) Frame = +1 Query: 250 LGKQVKLSFISSNSSTMLPFDIIHSDIWTSPVLSYLGHRYYVLFLDDYSNFLWTFSLSKK 429 +G V+L F SS+S T+ PF ++H+D+WTSP+ S G++YYV+FLDD+++++WTF + K Sbjct: 536 VGTNVRLPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYYVVFLDDFTHYIWTFPVRNK 595 Query: 430 *YFSHS*R 453 H+ R Sbjct: 596 SEVFHTVR 603 Score = 44.3 bits (103), Expect(4) = 4e-30 Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Frame = +3 Query: 3 GFSVKDFRTEMILMRCESWGEFYPITTTIANN*SIPLTFTALAPSL--*HERLGHLGSSI 176 GFS+KD +T+++ +RC+S G+ YP+ + L+ T+ +PS+ H RLGH GS+ Sbjct: 457 GFSIKDLQTQVVKLRCDSPGDLYPLRLPSPH----ALSATS-SPSVEHWHLRLGHPGSAS 511 Query: 177 LDSLRKNKFIECNR 218 L + + +CN+ Sbjct: 512 LSKVLGSFDFQCNK 525 Score = 40.8 bits (94), Expect(4) = 4e-30 Identities = 18/32 (56%), Positives = 24/32 (75%) Frame = +2 Query: 608 EAERKIHTINNIVRTLLAHASLPPSFWHHALQ 703 +AER + TIN+ VRT+L H++ P SFW ALQ Sbjct: 657 KAERILRTINDYVRTMLVHSAAPLSFWAEALQ 688 Score = 35.0 bits (79), Expect(4) = 4e-30 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Frame = +3 Query: 444 FLTVR---ALIRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGK 611 F TVR A T F + +Q DN +E+D+ R + + R SCP + QNGK Sbjct: 599 FHTVRSFFAYAHTQFGLPVLALQTDNGKEYDSYALRSLLSLHGAVLRLSCPYSSQQNGK 657 >gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1414 Score = 78.2 bits (191), Expect(4) = 4e-30 Identities = 31/68 (45%), Positives = 50/68 (73%) Frame = +1 Query: 250 LGKQVKLSFISSNSSTMLPFDIIHSDIWTSPVLSYLGHRYYVLFLDDYSNFLWTFSLSKK 429 +G V+L F SS+S T+ PF ++H+D+WTSP+ S G++YYV+FLDD+++++WTF + K Sbjct: 536 VGTNVRLPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYYVVFLDDFTHYIWTFPVRNK 595 Query: 430 *YFSHS*R 453 H+ R Sbjct: 596 SEVFHTVR 603 Score = 44.3 bits (103), Expect(4) = 4e-30 Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Frame = +3 Query: 3 GFSVKDFRTEMILMRCESWGEFYPITTTIANN*SIPLTFTALAPSL--*HERLGHLGSSI 176 GFS+KD +T+++ +RC+S G+ YP+ + L+ T+ +PS+ H RLGH GS+ Sbjct: 457 GFSIKDLQTQVVKLRCDSPGDLYPLRLPSPH----ALSATS-SPSVEHWHLRLGHPGSAS 511 Query: 177 LDSLRKNKFIECNR 218 L + + +CN+ Sbjct: 512 LSKVLGSFDFQCNK 525 Score = 40.8 bits (94), Expect(4) = 4e-30 Identities = 18/32 (56%), Positives = 24/32 (75%) Frame = +2 Query: 608 EAERKIHTINNIVRTLLAHASLPPSFWHHALQ 703 +AER + TIN+ VRT+L H++ P SFW ALQ Sbjct: 657 KAERILRTINDYVRTMLVHSAAPLSFWAEALQ 688 Score = 35.0 bits (79), Expect(4) = 4e-30 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Frame = +3 Query: 444 FLTVR---ALIRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGK 611 F TVR A T F + +Q DN +E+D+ R + + R SCP + QNGK Sbjct: 599 FHTVRSFFAYAHTQFGLPVLALQTDNGKEYDSYALRSLLSLHGAVLRLSCPYSSQQNGK 657 >gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata] Length = 1296 Score = 72.4 bits (176), Expect(3) = 9e-29 Identities = 31/60 (51%), Positives = 43/60 (71%) Frame = +1 Query: 250 LGKQVKLSFISSNSSTMLPFDIIHSDIWTSPVLSYLGHRYYVLFLDDYSNFLWTFSLSKK 429 LGK +L F +SN+ F+I+HSDIWTSPV S G +YY++FLD YS+F+W + L +K Sbjct: 534 LGKHTRLPFFNSNTIASSLFEIVHSDIWTSPVPSISGLKYYLIFLDQYSHFVWAYPLHRK 593 Score = 57.4 bits (137), Expect(3) = 9e-29 Identities = 23/56 (41%), Positives = 36/56 (64%) Frame = +3 Query: 444 FLTVRALIRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGK 611 ++ ++T F R+ K++QCDN+RE+DN F++ + FRFSCP T QNG+ Sbjct: 600 YINFSTYVQTQFNRQFKSLQCDNDREYDNRAFKEHLASTRTVFRFSCPHTSQQNGR 655 Score = 44.3 bits (103), Expect(3) = 9e-29 Identities = 26/81 (32%), Positives = 39/81 (48%) Frame = +3 Query: 3 GFSVKDFRTEMILMRCESWGEFYPITTTIANN*SIPLTFTALAPSL*HERLGHLGSSILD 182 GFSVKD +T L+RC+S G Y +T + + L T + H RLGH S++L Sbjct: 451 GFSVKDLKTRNKLLRCDSSGPLYSVTPSSYPSSHHALAATTSDSFIWHRRLGHPSSTLLS 510 Query: 183 SLRKNKFIECNRLRRSIFCSS 245 L + I + + C + Sbjct: 511 HLLSSLSISVPKTDLTSLCQA 531 >gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group] Length = 1250 Score = 76.6 bits (187), Expect(2) = 6e-21 Identities = 33/60 (55%), Positives = 43/60 (71%) Frame = +1 Query: 250 LGKQVKLSFISSNSSTMLPFDIIHSDIWTSPVLSYLGHRYYVLFLDDYSNFLWTFSLSKK 429 LGK +L F S SST PF+++H D+WTSPVLS G +YY++ LDD+S+F WTF L K Sbjct: 527 LGKHTRLPFSRSQSSTSSPFELVHCDVWTSPVLSTSGFKYYLVVLDDFSHFCWTFPLRHK 586 Score = 50.8 bits (120), Expect(2) = 6e-21 Identities = 28/77 (36%), Positives = 42/77 (54%) Frame = +3 Query: 3 GFSVKDFRTEMILMRCESWGEFYPITTTIANN*SIPLTFTALAPSL*HERLGHLGSSILD 182 GFSVK RT +++RC S G+ Y T IA +F A + +L H RLGH S+ + Sbjct: 447 GFSVKGLRTRRVILRCNSRGDLY--TLPIAAPAIAAHSFLAQSSTLWHRRLGHPSSAAIQ 504 Query: 183 SLRKNKFIECNRLRRSI 233 +L K + C ++ S+ Sbjct: 505 TLHKLAILPCTKIDHSL 521 >emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] Length = 1171 Score = 64.7 bits (156), Expect(4) = 1e-19 Identities = 29/60 (48%), Positives = 39/60 (65%) Frame = +1 Query: 250 LGKQVKLSFISSNSSTMLPFDIIHSDIWTSPVLSYLGHRYYVLFLDDYSNFLWTFSLSKK 429 LGK +L F S+ + +P +IHSD+W SPV S G YYVLF+DDYS + W + L +K Sbjct: 498 LGKAKQLPFPESSRQSSVPLALIHSDVWVSPVQSTGGCSYYVLFIDDYSRYSWLYPLHRK 557 Score = 45.1 bits (105), Expect(4) = 1e-19 Identities = 22/61 (36%), Positives = 30/61 (49%) Frame = +3 Query: 441 TFLTVRALIRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGKPKE 620 TF+ + + F IK IQ DN EF + +F+ F I R +CP T QNG + Sbjct: 563 TFVKFKTIAEKLFSTSIKQIQTDNGGEFTSNQFKQFLTAQGIFHRLTCPHTSQQNGIVER 622 Query: 621 K 623 K Sbjct: 623 K 623 Score = 26.2 bits (56), Expect(4) = 1e-19 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 5/86 (5%) Frame = +3 Query: 3 GFSVKDFRTEMILMRCESWGEFYPITTTIANN*SIPLTFTALA----PSL*HERLGHLGS 170 GF VK+ T IL++ YP+ + S+ T + H RLGH S Sbjct: 410 GFVVKENLTGRILLQGVVENGLYPLAGCKTFHKSLTCLSTTIGVRANADTWHSRLGHPSS 469 Query: 171 SILDSL-RKNKFIECNRLRRSIFCSS 245 I +SL NK + FCS+ Sbjct: 470 VIFNSLFHSNKLSVKGSSTKLEFCSA 495 Score = 26.2 bits (56), Expect(4) = 1e-19 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +2 Query: 614 ERKIHTINNIVRTLLAHASLPPSFW 688 ERK I + TLLA +SL P +W Sbjct: 621 ERKHRHIQEMGLTLLAQSSLSPQYW 645 >gb|AEJ07955.1| putative polyprotein [Sorghum propinquum] Length = 826 Score = 77.8 bits (190), Expect(2) = 1e-18 Identities = 65/220 (29%), Positives = 86/220 (39%), Gaps = 17/220 (7%) Frame = +3 Query: 3 GFSVKDFRTEMILMRCESWGEFYPITTTIANN*SIPLTFTALAPSL*HERLGHLGSSILD 182 G SVKD +T ++ RC S G+ YP + A SL H RLGHLG L Sbjct: 553 GLSVKDLQTRNVIARCNSSGDLYPFFPPATS----ATALLAAPASLWHRRLGHLGREALS 608 Query: 183 SLRKNKFIECN--------------RLRRSIFCSSSTRKTSXXXXXXXXXXXXXXXXXXS 320 L + I CN R R F +S++R T+ Sbjct: 609 QLVSSSAISCNKDDDYHLCHACQLGRHTRLPFSTSTSRATNNFDLIHCDLWASPI----- 663 Query: 321 **YLDISCFKLFGPPXXXXXXXXXXXXXXXXXXXXXXXXXTFLTVR---ALIRT*FERKI 491 + +S +K + TF TV A +RT F I Sbjct: 664 ---VSVSGYKYY-------LIILDDRSHYIWTFPLRLKSDTFSTVANFFAHVRTQFGTTI 713 Query: 492 KNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGK 611 K++QCDN REFDN R F ++ ++ R SCP T QNGK Sbjct: 714 KSVQCDNGREFDNSMSRTFFLSHGVALRMSCPYTSQQNGK 753 Score = 42.0 bits (97), Expect(2) = 1e-18 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +2 Query: 608 EAERKIHTINNIVRTLLAHASLPPSFWHHAL 700 +AER I T+NNI+R+LL ASLPP +W AL Sbjct: 753 KAERSIRTMNNILRSLLFQASLPPVYWVEAL 783 >gb|EMS54188.1| Putative late blight resistance protein-like protein R1B-14 [Triticum urartu] Length = 770 Score = 64.3 bits (155), Expect(2) = 4e-18 Identities = 26/60 (43%), Positives = 42/60 (70%) Frame = +1 Query: 250 LGKQVKLSFISSNSSTMLPFDIIHSDIWTSPVLSYLGHRYYVLFLDDYSNFLWTFSLSKK 429 +GK V L F +S++ + PF+++H D+WTSP S G +YY++ L+DYS+F+ TF + K Sbjct: 596 MGKHVHLPFGTSSTRSSFPFELLHCDLWTSPTPSVFGFKYYLVLLNDYSHFICTFPIRAK 655 Score = 53.5 bits (127), Expect(2) = 4e-18 Identities = 27/56 (48%), Positives = 33/56 (58%) Frame = +3 Query: 444 FLTVRALIRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGK 611 F+ + + T F I+ +QCDN REFDN R R F + I RFSCP T QNGK Sbjct: 662 FVNFQRYVFTHFSLPIRFLQCDNGREFDNSRNRAFFLAHGILLRFSCPYTSPQNGK 717 >gb|ADB85253.1| putative retrotransposon protein [Phyllostachys edulis] Length = 861 Score = 68.9 bits (167), Expect(3) = 8e-18 Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 5/90 (5%) Frame = +1 Query: 169 HLFWTLLEKINLLSVIGCV----GLFFVHHPLGKQVKLSFISSNSSTMLPFDIIHSDIW- 333 HL + L + V+G V +F LGK ++L + SS S + PFD++HSD+W Sbjct: 398 HLCGSCLSSLVRQGVLGRVPVDTSMFCQGCKLGKWLQLPYHSSESLSSRPFDLVHSDVWG 457 Query: 334 TSPVLSYLGHRYYVLFLDDYSNFLWTFSLS 423 +P++S GH+ YV+F+DDYS F W F +S Sbjct: 458 PAPIISKGGHKSYVIFIDDYSRFTWIFPIS 487 Score = 43.9 bits (102), Expect(3) = 8e-18 Identities = 21/59 (35%), Positives = 33/59 (55%) Frame = +3 Query: 462 LIRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGKPKEKFIPLI 638 ++RT F+ I+ +CD+ E+ +G FR F + ++ SCP AQNG + K LI Sbjct: 502 MVRTQFDSPIRTFRCDSAGEYCSGTFRQFLSEQGTLYQSSCPGARAQNGVVEHKHRHLI 560 Score = 23.9 bits (50), Expect(3) = 8e-18 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = +2 Query: 614 ERKIHTINNIVRTLLAHASLPPSFW 688 E K + RTLL + +PP FW Sbjct: 553 EHKHRHLIETARTLLLASHVPPQFW 577 >gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1419 Score = 63.5 bits (153), Expect(4) = 1e-16 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Frame = +1 Query: 250 LGKQVKLSFISSNSSTMLPFDIIHSDIW-TSPVLSYLGHRYYVLFLDDYSNFLWTFSLSK 426 LGKQV+L + SS S + PF ++HSD+W +P S GHRYYV+F+DD+S + W + + Sbjct: 675 LGKQVQLPYRSSMSRSTSPFALVHSDVWGPAPFHSKGGHRYYVIFVDDFSRYTWIYFMKH 734 Query: 427 K 429 + Sbjct: 735 R 735 Score = 35.0 bits (79), Expect(4) = 1e-16 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +3 Query: 459 ALIRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGKPKEK 623 +++ T F IKN + D+ E+ + FR + + + SCP AQNG + K Sbjct: 747 SMVHTQFSTSIKNFRSDSGGEYLSNAFRQLLSDHGTLPQLSCPGAHAQNGVAERK 801 Score = 28.9 bits (63), Expect(4) = 1e-16 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 611 AERKIHTINNIVRTLLAHASLPPSFWHHAL 700 AERK I RTLL + +PP FW A+ Sbjct: 798 AERKHRHIIETARTLLIASHVPPHFWAEAV 827 Score = 24.6 bits (52), Expect(4) = 1e-16 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +3 Query: 81 TTIANN*SIPLTFTALAPSL*HERLGHLGSSILDSL 188 T+I +N S+ + +A P H RLGHL S L +L Sbjct: 619 TSITSNSSVYSSLSASFPQW-HHRLGHLCGSRLSTL 653 >gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subclass, expressed [Oryza sativa Japonica Group] Length = 976 Score = 62.4 bits (150), Expect(3) = 2e-16 Identities = 31/57 (54%), Positives = 35/57 (61%) Frame = +3 Query: 441 TFLTVRALIRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGK 611 T L A I+T F I++IQCDN REFDN RDF N +S R SCP T QNGK Sbjct: 290 TLLRFFAYIKTHFSTTIRSIQCDNGREFDNSAARDFFLRNGVSIRMSCPHTSPQNGK 346 Score = 41.2 bits (95), Expect(3) = 2e-16 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +2 Query: 608 EAERKIHTINNIVRTLLAHASLPPSFWHHAL 700 +AER + ++NNIVR+LL ASLP SFW AL Sbjct: 346 KAERTLRSLNNIVRSLLFQASLPASFWVEAL 376 Score = 28.5 bits (62), Expect(3) = 2e-16 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +1 Query: 370 YVLFLDDYSNFLWTFSLSKK 429 Y++ LDD S+F+WTF L K Sbjct: 265 YLVILDDCSHFVWTFPLRLK 284 >gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1597 Score = 58.2 bits (139), Expect(3) = 2e-16 Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 3/60 (5%) Frame = +3 Query: 441 TFLTVR---ALIRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGK 611 TF T+ A ++T F I++IQCDN REFDN R F TN ++ R SCP T QNGK Sbjct: 713 TFTTLSHFFAYVKTQFSTNIRSIQCDNGREFDNISARTFFLTNGVTMRMSCPHTSPQNGK 772 Score = 38.5 bits (88), Expect(3) = 2e-16 Identities = 18/31 (58%), Positives = 24/31 (77%) Frame = +2 Query: 608 EAERKIHTINNIVRTLLAHASLPPSFWHHAL 700 +AER + +INNI+R+LL ASLP +FW AL Sbjct: 772 KAERILRSINNIMRSLLFQASLPGTFWVEAL 802 Score = 35.0 bits (79), Expect(3) = 2e-16 Identities = 15/32 (46%), Positives = 24/32 (75%) Frame = +1 Query: 334 TSPVLSYLGHRYYVLFLDDYSNFLWTFSLSKK 429 + P++S G++YY++ LDD S+F+WTF L K Sbjct: 681 SGPLVS--GYKYYLVILDDCSHFVWTFPLRFK 710 >ref|XP_006582651.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Glycine max] Length = 317 Score = 91.3 bits (225), Expect = 3e-16 Identities = 51/72 (70%), Positives = 55/72 (76%), Gaps = 2/72 (2%) Frame = +3 Query: 3 GFSVKDFRTEMILMRCESWGEFYPIT--TTIANN*SIPLTFTALAPSL*HERLGHLGSSI 176 GFSVK+F+T M LMRCESWG YPIT TT A + S TF +LAPSL HERLGH G SI Sbjct: 9 GFSVKNFQTGMPLMRCESWGMLYPITESTTPATSSS---TFASLAPSLWHERLGHPGVSI 65 Query: 177 LDSLRKNKFIEC 212 L SLRKNKFIEC Sbjct: 66 LHSLRKNKFIEC 77 >gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group] gi|108709048|gb|ABF96843.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 594 Score = 69.7 bits (169), Expect(2) = 4e-16 Identities = 28/60 (46%), Positives = 43/60 (71%) Frame = +1 Query: 250 LGKQVKLSFISSNSSTMLPFDIIHSDIWTSPVLSYLGHRYYVLFLDDYSNFLWTFSLSKK 429 LGK +L F S SST PF+++H D+WTS V+S G ++Y++ +DD+++F WTF L +K Sbjct: 519 LGKHTRLPFNKSTSSTSSPFELVHCDVWTSLVMSISGFKFYLVLVDDFTHFCWTFPLCQK 578 Score = 41.6 bits (96), Expect(2) = 4e-16 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +3 Query: 3 GFSVKDFRTEMILMRCESWGEFYPITTTIANN*SIPLTFT-ALAPSL*HERLGHLGSSIL 179 GFS+KD +T +++RC S GE Y + SI + A + +L H RLGH G + + Sbjct: 439 GFSIKDPQTRRVILRCNSHGELYTLPAAAP---SIAAHYNLATSSTLWHRRLGHPGPTAV 495 Query: 180 DSLRKNKFIECNRLRRSI 233 +L+ I ++ S+ Sbjct: 496 TTLQHLSAIPRSKTNNSL 513 >emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group] Length = 1455 Score = 42.7 bits (99), Expect(4) = 8e-16 Identities = 18/31 (58%), Positives = 23/31 (74%) Frame = +2 Query: 608 EAERKIHTINNIVRTLLAHASLPPSFWHHAL 700 +AER I T+NN +RTLL AS+PPS+W L Sbjct: 688 KAERMIRTLNNSIRTLLLQASMPPSYWAEGL 718 Score = 39.3 bits (90), Expect(4) = 8e-16 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%) Frame = +3 Query: 3 GFSVKDFRTEMILMRCESWGEFYPI---TTTIANN*SIPLTFTALAPSL*HERLGHLGSS 173 GFS KD +T +++RC S GE Y + +IA + ++ A + +L H RLGH G + Sbjct: 520 GFSFKDPQTRRVILRCNSHGELYTLPAAAPSIAAHCNL-----ATSSTLWHRRLGHPGPT 574 Query: 174 ILDSLRKNKFIECNRLRRSI 233 + +L+ I ++ S+ Sbjct: 575 AVTTLQHLSAIPRSKTNNSL 594 Score = 35.0 bits (79), Expect(4) = 8e-16 Identities = 19/47 (40%), Positives = 22/47 (46%) Frame = +3 Query: 471 T*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGK 611 T F ++K +Q DN EF N F R SCP T QNGK Sbjct: 642 TQFGHRLKCLQADNGTEFVNHNTTSFLAGRGSLLRLSCPYTSPQNGK 688 Score = 32.0 bits (71), Expect(4) = 8e-16 Identities = 19/46 (41%), Positives = 26/46 (56%) Frame = +1 Query: 250 LGKQVKLSFISSNSSTMLPFDIIHSDIWTSPVLSYLGHRYYVLFLD 387 LGK +L F S SST PF+++H D S V HR+ V F++ Sbjct: 600 LGKHTRLPFNKSTSSTSSPFELVHCD--KSDV-----HRHIVEFVE 638 >emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] Length = 1466 Score = 60.8 bits (146), Expect(3) = 8e-16 Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 1/61 (1%) Frame = +1 Query: 250 LGKQVKLSFISSNSSTMLPFDIIHSDIW-TSPVLSYLGHRYYVLFLDDYSNFLWTFSLSK 426 +GK +L F SS+ + P D +H D+W SPV+S G +YY +F+DD+S F W F L Sbjct: 495 MGKSTRLQFFSSDFRALKPLDRVHCDLWGPSPVVSNQGFKYYAVFVDDFSRFSWFFPLRM 554 Query: 427 K 429 K Sbjct: 555 K 555 Score = 38.1 bits (87), Expect(3) = 8e-16 Identities = 21/67 (31%), Positives = 31/67 (46%) Frame = +3 Query: 444 FLTVRALIRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGKPKEK 623 F+ + L+ KIK Q D EF + + ++ + I R SCP T QNG + K Sbjct: 562 FIAYQKLVENQLGTKIKEFQSDGGGEFTSNKLKEHFREHGIHHRISCPYTPQQNGVAERK 621 Query: 624 FIPLIIL 644 L+ L Sbjct: 622 HRHLVEL 628 Score = 30.8 bits (68), Expect(3) = 8e-16 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = +3 Query: 144 HERLGHLGSSILDSLRKNKFIECNRLRRSIFC 239 H RLGH S IL L K I+ N+ R S C Sbjct: 459 HHRLGHSNSKILQQLLTRKEIQVNKSRTSPVC 490 >gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1447 Score = 51.2 bits (121), Expect(4) = 2e-15 Identities = 22/59 (37%), Positives = 35/59 (59%) Frame = +1 Query: 253 GKQVKLSFISSNSSTMLPFDIIHSDIWTSPVLSYLGHRYYVLFLDDYSNFLWTFSLSKK 429 GK +L + S+S + P ++I+SD+W + S G +YYV F+ DYS F W + + K Sbjct: 497 GKSHQLPYSRSSSMSSHPLELIYSDVWGPALTSVGGKQYYVSFIGDYSKFTWLYLIKHK 555 Score = 33.5 bits (75), Expect(4) = 2e-15 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Frame = +3 Query: 6 FSVKDFRTEMILMRCESWGEFYPITTTIANN*SIPL--TFTALAPSL*--HERLGHLGSS 173 F++KD T+ +L R G Y + ++ + PL F A+ PS H RLGH S Sbjct: 409 FNLKDLATKKLLFRGPCRGRLYALPSSSPHERPRPLKEAFGAIKPSFERWHSRLGHPASP 468 Query: 174 ILDSLRKNKFIEC 212 I++ + + C Sbjct: 469 IVEKVISKNNLPC 481 Score = 32.3 bits (72), Expect(4) = 2e-15 Identities = 20/60 (33%), Positives = 28/60 (46%) Frame = +3 Query: 444 FLTVRALIRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGKPKEK 623 F +AL+ F RKI +Q D E++ + F I+ SCP T QNG + K Sbjct: 562 FHEFQALVERLFNRKIIAMQSDWGGEYE--KLHSFFTKIGITHHVSCPHTHQQNGSAERK 619 Score = 30.8 bits (68), Expect(4) = 2e-15 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +2 Query: 611 AERKIHTINNIVRTLLAHASLPPSFWHHALQ 703 AERK I + TLLA++S+P FW A Q Sbjct: 616 AERKHRHIVEVGLTLLAYSSMPLKFWDEAFQ 646 >gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana] gi|225898008|dbj|BAH30336.1| hypothetical protein [Arabidopsis thaliana] Length = 1459 Score = 55.1 bits (131), Expect(4) = 3e-15 Identities = 20/60 (33%), Positives = 39/60 (65%) Frame = +1 Query: 250 LGKQVKLSFISSNSSTMLPFDIIHSDIWTSPVLSYLGHRYYVLFLDDYSNFLWTFSLSKK 429 + K KL F +S+ + P + I +D+WTSP++S+ ++YY++ +D Y+ + W + L +K Sbjct: 511 INKSHKLPFATSSIHSSSPLEYIFTDVWTSPIISHDNYKYYLVLVDHYTRYTWLYPLQQK 570 Score = 37.7 bits (86), Expect(4) = 3e-15 Identities = 23/61 (37%), Positives = 31/61 (50%) Frame = +3 Query: 441 TFLTVRALIRT*FERKIKNIQCDNEREFDNGRFRDFCNTNDISFRFSCPRTFAQNGKPKE 620 TF+ +AL+ F+ KI+ + DN EF RDF +N IS S P T NG + Sbjct: 576 TFIAFKALVENRFQAKIRTLYSDNGGEFI--ALRDFLVSNGISHLTSPPHTPEHNGLSER 633 Query: 621 K 623 K Sbjct: 634 K 634 Score = 30.0 bits (66), Expect(4) = 3e-15 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 6/67 (8%) Frame = +3 Query: 6 FSVKDFRTEMILMRCESWGEFY--PITTTIANN*SIPLTFTALAP----SL*HERLGHLG 167 F VKD T +L++ + + Y P+T A FT+ +P S H RLGH Sbjct: 427 FQVKDLNTGTLLLQGRTKDDLYEWPVTNPPAT-----ALFTSPSPKTTLSSWHSRLGHPS 481 Query: 168 SSILDSL 188 +SIL++L Sbjct: 482 ASILNTL 488 Score = 24.3 bits (51), Expect(4) = 3e-15 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 611 AERKIHTINNIVRTLLAHASLPPSFWHHA 697 +ERK I TLL AS+P +W +A Sbjct: 631 SERKHRHIVETGLTLLTQASVPREYWTYA 659