BLASTX nr result
ID: Atropa21_contig00016231
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00016231
(763 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like prote... 215 2e-53
ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like prote... 212 1e-52
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275... 202 8e-50
ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like prote... 201 2e-49
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote... 201 3e-49
ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like prote... 200 4e-49
ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like prote... 200 4e-49
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|5... 200 5e-49
gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus... 199 9e-49
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri... 198 1e-48
gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus pe... 198 2e-48
ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like prote... 198 2e-48
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin... 198 2e-48
ref|XP_006407130.1| hypothetical protein EUTSA_v10021763mg [Eutr... 194 3e-47
ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabi... 194 3e-47
ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arab... 193 6e-47
ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Me... 192 1e-46
ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citr... 191 2e-46
ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like prote... 191 2e-46
gb|EOY27290.1| Small nuclear ribonucleoprotein family protein is... 191 3e-46
>ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
lycopersicum]
Length = 128
Score = 215 bits (547), Expect = 2e-53
Identities = 110/128 (85%), Positives = 110/128 (85%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWA PEDIYLSTSLASY TLRSFDQFANAVLEGACERVIVGEI
Sbjct: 1 MSWASPEDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEI 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLDMD
Sbjct: 121 RMEFLDMD 128
>ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
tuberosum]
Length = 128
Score = 212 bits (539), Expect = 1e-52
Identities = 109/128 (85%), Positives = 109/128 (85%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWA EDIYLSTSLASY TLRSFDQFANAVLEGACERVIVGEI
Sbjct: 1 MSWASSEDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEI 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLDMD
Sbjct: 121 RMEFLDMD 128
>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 202 bits (515), Expect = 8e-50
Identities = 102/128 (79%), Positives = 108/128 (84%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPEDIYLSTSLASY LRSFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLYIIRGENVVLIGELD++KEELPPHMTRV AEIRRAQKAER+ATDLKGTMRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform X1
[Cicer arietinum]
Length = 128
Score = 201 bits (511), Expect = 2e-49
Identities = 99/128 (77%), Positives = 108/128 (84%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPEDIYLSTSLASY TLRSFDQFANAVLEGACERV+VG++
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVVVGDL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLY+IRGENVVLIGELD+++EELPPHMTRVP EI RAQKAER+A+DLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDMEREELPPHMTRVPTEEILRAQKAERDASDLKGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLDMD
Sbjct: 121 RMEFLDMD 128
>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera] gi|147803430|emb|CAN62239.1| hypothetical
protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product
[Vitis vinifera]
Length = 128
Score = 201 bits (510), Expect = 3e-49
Identities = 100/128 (78%), Positives = 108/128 (84%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPEDIYLSTSLASY LRSFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLY+IRGENVVLIGELD++KEELPPHMTRV AEI+RAQKAEREA+DLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
vesca subsp. vesca]
Length = 128
Score = 200 bits (509), Expect = 4e-49
Identities = 99/128 (77%), Positives = 107/128 (83%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPED+YLSTSLASY LRSFDQFANAVLEGACERVIVGE+
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKILVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCD+PLGLY+IRGENVVLIGELD ++EELPPHMTRV AEI+RAQKAEREA+DLKGTMRK
Sbjct: 61 YCDLPLGLYVIRGENVVLIGELDAEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLDMD
Sbjct: 121 RMEFLDMD 128
>ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
vinifera] gi|297738539|emb|CBI27784.3| unnamed protein
product [Vitis vinifera]
Length = 128
Score = 200 bits (509), Expect = 4e-49
Identities = 99/128 (77%), Positives = 106/128 (82%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPED+ STSLASY LRSFDQFANAVLEGACER IVG+I
Sbjct: 1 MSWAGPEDLLFSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDI 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLY+IRGENVVL+GELD+DKEELPPHMTRVPEAEI+RAQKAEREATDLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLLGELDLDKEELPPHMTRVPEAEIKRAQKAEREATDLKGSMRK 120
Query: 557 RMEFLDMD 580
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_002331181.1| predicted protein [Populus trichocarpa]
gi|566149434|ref|XP_006369123.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa
x Populus deltoides] gi|550347483|gb|ERP65692.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 200 bits (508), Expect = 5e-49
Identities = 100/128 (78%), Positives = 108/128 (84%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPEDIYLSTSLA+Y LRSFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDI LGLY+IRGENVVLIGELD+++EELPPHMTRV EAEIRRAQKAEREATDLKGTMRK
Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
Length = 128
Score = 199 bits (506), Expect = 9e-49
Identities = 100/128 (78%), Positives = 107/128 (83%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPEDIYLSTSLASY TLRSFDQFANAVLEGACERVIVGE+
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLY+IRGENVVLIGELD+++EELP HMTRV AEI+RAQKAEREA+DLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|222841552|gb|EEE79099.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 198 bits (504), Expect = 1e-48
Identities = 99/128 (77%), Positives = 107/128 (83%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPEDIYLSTSLASY LRSFDQFANAVLEGACER IVG++
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDI LGLY+IRGENVVLIGELD+++EELPPHMTRV EAEI+RAQKAEREATDLKGTMRK
Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus persica]
Length = 128
Score = 198 bits (503), Expect = 2e-48
Identities = 99/128 (77%), Positives = 106/128 (82%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPED+YLSTSLASY LRSFDQFANAVLEGACERVIVGE+
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLY+IRGENVVLIGELD ++EELPPHMTRV AEI+ AQKAEREA+DLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDSEREELPPHMTRVSAAEIKSAQKAEREASDLKGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLDMD
Sbjct: 121 RMEFLDMD 128
>ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
lycopersicum] gi|565351988|ref|XP_006342929.1|
PREDICTED: probable U6 snRNA-associated Sm-like protein
LSm1-like [Solanum tuberosum]
Length = 128
Score = 198 bits (503), Expect = 2e-48
Identities = 100/128 (78%), Positives = 105/128 (82%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWA PEDIY STSLASY LRSFDQFANAVLE ACER IVG++
Sbjct: 1 MSWASPEDIYTSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLESACERAIVGDL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRV EAEIRRAQKAER++TDLKG+MRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVSEAEIRRAQKAERDSTDLKGSMRK 120
Query: 557 RMEFLDMD 580
RMEFLDMD
Sbjct: 121 RMEFLDMD 128
>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
gi|561008464|gb|ESW07413.1| hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris]
Length = 128
Score = 198 bits (503), Expect = 2e-48
Identities = 99/128 (77%), Positives = 107/128 (83%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPEDIYLSTSLASY TLRSFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLY+IRGENVVLIGELD+++EELP HMTRV AEI+RAQKAEREA+DLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_006407130.1| hypothetical protein EUTSA_v10021763mg [Eutrema salsugineum]
gi|557108276|gb|ESQ48583.1| hypothetical protein
EUTSA_v10021763mg [Eutrema salsugineum]
Length = 128
Score = 194 bits (493), Expect = 3e-47
Identities = 97/128 (75%), Positives = 104/128 (81%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPEDIYLSTSLASY TLRSFDQFANAVLEGACERVIVGE
Sbjct: 1 MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLY+IRGENVVLIGELD ++EELPPHM RV E EI+RAQK EREA++L+GTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDTEREELPPHMIRVSETEIKRAQKVEREASELRGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|30682974|ref|NP_850580.1| U6 snRNA-associated Sm-like
protein LSm1 [Arabidopsis thaliana]
gi|21536995|gb|AAM61336.1| Sm protein, putative
[Arabidopsis thaliana] gi|27754337|gb|AAO22620.1|
putative Sm protein [Arabidopsis thaliana]
gi|28393853|gb|AAO42334.1| putative Sm protein
[Arabidopsis thaliana] gi|332641944|gb|AEE75465.1| U6
snRNA-associated Sm-like protein LSm1 [Arabidopsis
thaliana] gi|332641945|gb|AEE75466.1| U6
snRNA-associated Sm-like protein LSm1 [Arabidopsis
thaliana]
Length = 128
Score = 194 bits (493), Expect = 3e-47
Identities = 97/128 (75%), Positives = 105/128 (82%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPE+IYLSTSLASY TLRSFDQFANAVLEGACERVIVGE
Sbjct: 1 MSWAGPEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLY+IRGENVVLIGELD ++EELPPHM RV EAEI+RAQK EREA++L+GTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDTEREELPPHMIRVSEAEIKRAQKVEREASELRGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata] gi|565482348|ref|XP_006298814.1| hypothetical
protein CARUB_v10014920mg [Capsella rubella]
gi|297328707|gb|EFH59126.1| hypothetical protein
ARALYDRAFT_478821 [Arabidopsis lyrata subsp. lyrata]
gi|482567523|gb|EOA31712.1| hypothetical protein
CARUB_v10014920mg [Capsella rubella]
Length = 128
Score = 193 bits (490), Expect = 6e-47
Identities = 97/128 (75%), Positives = 105/128 (82%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPEDIYLSTSLASY TLRSFDQFANAVLEGACERVIVGE
Sbjct: 1 MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLY+IRGENVVLIGELD ++EELPP+M RV EAEI+RAQK EREA++L+GTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDTEREELPPNMIRVSEAEIKRAQKVEREASELRGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like
protein LSm1 [Medicago truncatula]
Length = 131
Score = 192 bits (487), Expect = 1e-46
Identities = 96/131 (73%), Positives = 107/131 (81%), Gaps = 3/131 (2%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWA PED+YLSTSLASY TLRSFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWAAPEDLYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIR---RAQKAEREATDLKGT 547
YCDIPLGLY+IRGENVVLIGE+DV++EELPPHMTRVP EIR RAQK ER+A++LKGT
Sbjct: 61 YCDIPLGLYVIRGENVVLIGEMDVEREELPPHMTRVPTEEIRRGIRAQKVERDASELKGT 120
Query: 548 MRKRMEFLDMD 580
MRKRMEFLD+D
Sbjct: 121 MRKRMEFLDLD 131
>ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citrus clementina]
gi|568822947|ref|XP_006465886.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm1-like [Citrus
sinensis] gi|557528691|gb|ESR39941.1| hypothetical
protein CICLE_v10026767mg [Citrus clementina]
Length = 128
Score = 191 bits (485), Expect = 2e-46
Identities = 93/128 (72%), Positives = 107/128 (83%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGP+D+YLSTSLASY TL SFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLY+IRGENVVLIGELD++++ELPPH+T V AEI+RAQKAEREA+DLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRAQKAEREASDLKGSMRK 120
Query: 557 RMEFLDMD 580
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
vesca subsp. vesca]
Length = 128
Score = 191 bits (485), Expect = 2e-46
Identities = 95/128 (74%), Positives = 105/128 (82%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
MSWAGPED LSTSLASY LRSFDQFAN VLEGACERVIVG++
Sbjct: 1 MSWAGPEDSLLSTSLASYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLY+IRGENVVLIGEL+++KEELPPHMT VPEAEI+RAQKAER+A+DLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELELNKEELPPHMTLVPEAEIKRAQKAERDASDLKGSMRK 120
Query: 557 RMEFLDMD 580
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>gb|EOY27290.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 128
Score = 191 bits (484), Expect = 3e-46
Identities = 96/128 (75%), Positives = 105/128 (82%)
Frame = +2
Query: 197 MSWAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 376
M + GPEDIYLSTSLASY TLRSFDQFANAVLEGAC+RVIVG++
Sbjct: 1 MPYLGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACDRVIVGDL 60
Query: 377 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 556
YCDIPLGLY+IRGENVVLIGELD+++EELPPHMT V AEIRRAQKAEREA DLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTCVSAAEIRRAQKAEREARDLKGTMRK 120
Query: 557 RMEFLDMD 580
RMEFLD+D
Sbjct: 121 RMEFLDLD 128