BLASTX nr result
ID: Atropa21_contig00016195
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00016195
(733 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347066.1| PREDICTED: mediator of RNA polymerase II tra... 152 1e-34
ref|XP_006347065.1| PREDICTED: mediator of RNA polymerase II tra... 152 1e-34
ref|XP_004232849.1| PREDICTED: mediator of RNA polymerase II tra... 152 1e-34
ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II tra... 142 9e-32
ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra... 142 9e-32
gb|EOY28294.1| Sensitive to freezing 6 [Theobroma cacao] 142 1e-31
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm... 141 2e-31
ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II tra... 141 3e-31
ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II tra... 141 3e-31
ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citr... 141 3e-31
gb|EXB82792.1| hypothetical protein L484_012105 [Morus notabilis] 140 4e-31
ref|XP_006594603.1| PREDICTED: mediator of RNA polymerase II tra... 139 1e-30
ref|XP_003543060.2| PREDICTED: mediator of RNA polymerase II tra... 139 1e-30
ref|XP_002305810.2| hypothetical protein POPTR_0004s04050g [Popu... 139 1e-30
ref|XP_002305019.2| hypothetical protein POPTR_0004s04040g [Popu... 139 1e-30
gb|ESW31307.1| hypothetical protein PHAVU_002G227600g [Phaseolus... 136 6e-30
ref|XP_004485759.1| PREDICTED: mediator of RNA polymerase II tra... 135 1e-29
ref|XP_004485758.1| PREDICTED: mediator of RNA polymerase II tra... 135 1e-29
ref|XP_004485757.1| PREDICTED: mediator of RNA polymerase II tra... 135 1e-29
ref|XP_006377328.1| hypothetical protein POPTR_0011s04940g [Popu... 135 1e-29
>ref|XP_006347066.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Solanum tuberosum]
Length = 1040
Score = 152 bits (383), Expect = 1e-34
Identities = 67/74 (90%), Positives = 70/74 (94%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTA+WKT LEGVWYKCIRCLRQT+AFASPGGNPSA Q+EKEVWWISRWA
Sbjct: 967 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGGNPSANQHEKEVWWISRWA 1026
Query: 552 YGCPMCGGTWVRVV 511
GCPMCGGTWVRVV
Sbjct: 1027 CGCPMCGGTWVRVV 1040
>ref|XP_006347065.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Solanum tuberosum]
Length = 1244
Score = 152 bits (383), Expect = 1e-34
Identities = 67/74 (90%), Positives = 70/74 (94%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTA+WKT LEGVWYKCIRCLRQT+AFASPGGNPSA Q+EKEVWWISRWA
Sbjct: 1171 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGGNPSANQHEKEVWWISRWA 1230
Query: 552 YGCPMCGGTWVRVV 511
GCPMCGGTWVRVV
Sbjct: 1231 CGCPMCGGTWVRVV 1244
>ref|XP_004232849.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like [Solanum lycopersicum]
Length = 1246
Score = 152 bits (383), Expect = 1e-34
Identities = 67/74 (90%), Positives = 70/74 (94%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTA+WKT LEGVWYKCIRCLRQT+AFASPGGNPSA Q+EKEVWWISRWA
Sbjct: 1173 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGGNPSANQHEKEVWWISRWA 1232
Query: 552 YGCPMCGGTWVRVV 511
GCPMCGGTWVRVV
Sbjct: 1233 CGCPMCGGTWVRVV 1246
>ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like [Cucumis sativus]
Length = 1143
Score = 142 bits (359), Expect = 9e-32
Identities = 61/74 (82%), Positives = 66/74 (89%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
+LGIMGS RDVVTA+WKT LEGVWYKC+RCLRQT+AFASPG TQNE+E WWISRWA
Sbjct: 1070 FLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQTSAFASPGATNDTTQNERETWWISRWA 1129
Query: 552 YGCPMCGGTWVRVV 511
YGCPMCGGTWVRVV
Sbjct: 1130 YGCPMCGGTWVRVV 1143
>ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like [Cucumis sativus]
Length = 1220
Score = 142 bits (359), Expect = 9e-32
Identities = 61/74 (82%), Positives = 66/74 (89%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
+LGIMGS RDVVTA+WKT LEGVWYKC+RCLRQT+AFASPG TQNE+E WWISRWA
Sbjct: 1147 FLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQTSAFASPGATNDTTQNERETWWISRWA 1206
Query: 552 YGCPMCGGTWVRVV 511
YGCPMCGGTWVRVV
Sbjct: 1207 YGCPMCGGTWVRVV 1220
>gb|EOY28294.1| Sensitive to freezing 6 [Theobroma cacao]
Length = 1249
Score = 142 bits (357), Expect = 1e-31
Identities = 61/74 (82%), Positives = 66/74 (89%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTA+WKT LEGVWYKCIRCLRQT+AFASPG +QNE+E WWISRWA
Sbjct: 1176 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGSTSQRSQNERETWWISRWA 1235
Query: 552 YGCPMCGGTWVRVV 511
+GCPMCGGTWVRVV
Sbjct: 1236 HGCPMCGGTWVRVV 1249
>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
gi|223541698|gb|EEF43246.1| conserved hypothetical
protein [Ricinus communis]
Length = 1255
Score = 141 bits (356), Expect = 2e-31
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTA+WKT LEGVWYKCIRCLRQT+AFASPG QN++E WWISRWA
Sbjct: 1182 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGATNPPNQNDREAWWISRWA 1241
Query: 552 YGCPMCGGTWVRVV 511
YGCPMCGGTWVRVV
Sbjct: 1242 YGCPMCGGTWVRVV 1255
>ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Citrus sinensis]
Length = 1057
Score = 141 bits (355), Expect = 3e-31
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTA+WKT LEGVWYKCIRCLRQTAAFASPG QN++E WWISRWA
Sbjct: 984 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWA 1043
Query: 552 YGCPMCGGTWVRVV 511
+GCPMCGGTWVRVV
Sbjct: 1044 FGCPMCGGTWVRVV 1057
>ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Citrus sinensis]
Length = 1255
Score = 141 bits (355), Expect = 3e-31
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTA+WKT LEGVWYKCIRCLRQTAAFASPG QN++E WWISRWA
Sbjct: 1182 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWA 1241
Query: 552 YGCPMCGGTWVRVV 511
+GCPMCGGTWVRVV
Sbjct: 1242 FGCPMCGGTWVRVV 1255
>ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citrus clementina]
gi|557551917|gb|ESR62546.1| hypothetical protein
CICLE_v10014062mg [Citrus clementina]
Length = 1252
Score = 141 bits (355), Expect = 3e-31
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTA+WKT LEGVWYKCIRCLRQTAAFASPG QN++E WWISRWA
Sbjct: 1179 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWA 1238
Query: 552 YGCPMCGGTWVRVV 511
+GCPMCGGTWVRVV
Sbjct: 1239 FGCPMCGGTWVRVV 1252
>gb|EXB82792.1| hypothetical protein L484_012105 [Morus notabilis]
Length = 225
Score = 140 bits (353), Expect = 4e-31
Identities = 62/74 (83%), Positives = 65/74 (87%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTAIWKT LEGVWYKCIRCLRQT+AFASP + QNE+EVWWISRWA
Sbjct: 152 YLGIMGSRRDVVTAIWKTGLEGVWYKCIRCLRQTSAFASPDATNPSNQNEREVWWISRWA 211
Query: 552 YGCPMCGGTWVRVV 511
Y CPMCGGTWVRVV
Sbjct: 212 YSCPMCGGTWVRVV 225
>ref|XP_006594603.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Glycine max]
Length = 1055
Score = 139 bits (350), Expect = 1e-30
Identities = 59/74 (79%), Positives = 65/74 (87%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTA+WKT LEG+WYKCIRCLRQT AFASP +QN++E+WWISRWA
Sbjct: 982 YLGIMGSRRDVVTALWKTGLEGIWYKCIRCLRQTCAFASPASTNLPSQNDREIWWISRWA 1041
Query: 552 YGCPMCGGTWVRVV 511
YGCPMCGGTWVRVV
Sbjct: 1042 YGCPMCGGTWVRVV 1055
>ref|XP_003543060.2| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Glycine max]
Length = 1226
Score = 139 bits (350), Expect = 1e-30
Identities = 59/74 (79%), Positives = 65/74 (87%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTA+WKT LEG+WYKCIRCLRQT AFASP +QN++E+WWISRWA
Sbjct: 1153 YLGIMGSRRDVVTALWKTGLEGIWYKCIRCLRQTCAFASPASTNLPSQNDREIWWISRWA 1212
Query: 552 YGCPMCGGTWVRVV 511
YGCPMCGGTWVRVV
Sbjct: 1213 YGCPMCGGTWVRVV 1226
>ref|XP_002305810.2| hypothetical protein POPTR_0004s04050g [Populus trichocarpa]
gi|550340281|gb|EEE86321.2| hypothetical protein
POPTR_0004s04050g [Populus trichocarpa]
Length = 1328
Score = 139 bits (350), Expect = 1e-30
Identities = 61/74 (82%), Positives = 64/74 (86%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTA+WKT LEGVWYKCIRCLRQT+A ASPG QNE+E WWISRWA
Sbjct: 1255 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSALASPGAANPPDQNEREAWWISRWA 1314
Query: 552 YGCPMCGGTWVRVV 511
YGCPMCGGTWVRVV
Sbjct: 1315 YGCPMCGGTWVRVV 1328
>ref|XP_002305019.2| hypothetical protein POPTR_0004s04040g [Populus trichocarpa]
gi|550340280|gb|EEE85530.2| hypothetical protein
POPTR_0004s04040g [Populus trichocarpa]
Length = 1236
Score = 139 bits (350), Expect = 1e-30
Identities = 61/74 (82%), Positives = 64/74 (86%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTA+WKT LEGVWYKCIRCLRQT+A ASPG QNE+E WWISRWA
Sbjct: 1163 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSALASPGAANPPDQNEREAWWISRWA 1222
Query: 552 YGCPMCGGTWVRVV 511
YGCPMCGGTWVRVV
Sbjct: 1223 YGCPMCGGTWVRVV 1236
>gb|ESW31307.1| hypothetical protein PHAVU_002G227600g [Phaseolus vulgaris]
Length = 1241
Score = 136 bits (343), Expect = 6e-30
Identities = 58/74 (78%), Positives = 64/74 (86%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVTA WKT LEGVWYKC+RC RQT+AFASP +PS T N++EVWWISRW
Sbjct: 1168 YLGIMGSRRDVVTATWKTGLEGVWYKCVRCQRQTSAFASPDASPSLTPNDREVWWISRWV 1227
Query: 552 YGCPMCGGTWVRVV 511
+GCPMCGGTW RVV
Sbjct: 1228 HGCPMCGGTWARVV 1241
>ref|XP_004485759.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X3 [Cicer arietinum]
Length = 1027
Score = 135 bits (341), Expect = 1e-29
Identities = 57/74 (77%), Positives = 62/74 (83%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVT +WKT LEGVWYKCIRCLRQT AFASPG QN++E+WW+SRWA
Sbjct: 954 YLGIMGSRRDVVTTLWKTGLEGVWYKCIRCLRQTCAFASPGSTNLPNQNDREIWWVSRWA 1013
Query: 552 YGCPMCGGTWVRVV 511
YGCPMCGG W RVV
Sbjct: 1014 YGCPMCGGRWARVV 1027
>ref|XP_004485758.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Cicer arietinum]
Length = 1047
Score = 135 bits (341), Expect = 1e-29
Identities = 57/74 (77%), Positives = 62/74 (83%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVT +WKT LEGVWYKCIRCLRQT AFASPG QN++E+WW+SRWA
Sbjct: 974 YLGIMGSRRDVVTTLWKTGLEGVWYKCIRCLRQTCAFASPGSTNLPNQNDREIWWVSRWA 1033
Query: 552 YGCPMCGGTWVRVV 511
YGCPMCGG W RVV
Sbjct: 1034 YGCPMCGGRWARVV 1047
>ref|XP_004485757.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Cicer arietinum]
Length = 1247
Score = 135 bits (341), Expect = 1e-29
Identities = 57/74 (77%), Positives = 62/74 (83%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPGGNPSATQNEKEVWWISRWA 553
YLGIMGS RDVVT +WKT LEGVWYKCIRCLRQT AFASPG QN++E+WW+SRWA
Sbjct: 1174 YLGIMGSRRDVVTTLWKTGLEGVWYKCIRCLRQTCAFASPGSTNLPNQNDREIWWVSRWA 1233
Query: 552 YGCPMCGGTWVRVV 511
YGCPMCGG W RVV
Sbjct: 1234 YGCPMCGGRWARVV 1247
>ref|XP_006377328.1| hypothetical protein POPTR_0011s04940g [Populus trichocarpa]
gi|550327616|gb|ERP55125.1| hypothetical protein
POPTR_0011s04940g [Populus trichocarpa]
Length = 1249
Score = 135 bits (340), Expect = 1e-29
Identities = 63/76 (82%), Positives = 66/76 (86%), Gaps = 2/76 (2%)
Frame = -2
Query: 732 YLGIMGS*RDVVTAIWKTRLEGVWYKCIRCLRQTAAFASPG--GNPSATQNEKEVWWISR 559
YLGIMGS RDVVTA+WKT LEGVWYKCIRCLRQT+AFAS G NP QNE+E WWISR
Sbjct: 1175 YLGIMGSRRDVVTAMWKTGLEGVWYKCIRCLRQTSAFASTGAAANP-PNQNEREAWWISR 1233
Query: 558 WAYGCPMCGGTWVRVV 511
WAYGCPMCGGTWVRVV
Sbjct: 1234 WAYGCPMCGGTWVRVV 1249