BLASTX nr result

ID: Atropa21_contig00016147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00016147
         (1202 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359376.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    74   9e-11
ref|XP_004247421.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    74   9e-11
ref|XP_004247420.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    74   9e-11
ref|XP_002320345.2| hypothetical protein POPTR_0014s12440g [Popu...    71   1e-09
gb|EXC10292.1| Pre-mRNA-splicing factor SF2 [Morus notabilis]          70   2e-09
ref|XP_006382471.1| hypothetical protein POPTR_0005s02450g [Popu...    70   2e-09
ref|XP_006382470.1| hypothetical protein POPTR_0005s02450g [Popu...    70   2e-09
ref|XP_006375743.1| hypothetical protein POPTR_0013s01700g [Popu...    70   2e-09
ref|XP_006375742.1| hypothetical protein POPTR_0013s01700g [Popu...    70   2e-09
gb|EPS63380.1| hypothetical protein M569_11405, partial [Genlise...    70   2e-09
ref|XP_002523079.1| arginine/serine-rich splicing factor, putati...    70   2e-09
ref|XP_002330215.1| predicted protein [Populus trichocarpa]            70   2e-09
gb|EOX95073.1| RNA-binding family protein isoform 3 [Theobroma c...    70   2e-09
gb|EOX95072.1| RNA-binding family protein isoform 2 [Theobroma c...    70   2e-09
gb|EOX95071.1| RNA-binding family protein isoform 1 [Theobroma c...    70   2e-09
ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    70   2e-09
ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    70   2e-09
ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    70   2e-09
ref|XP_006355802.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    69   3e-09
ref|XP_004240541.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    69   3e-09

>ref|XP_006359376.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X1 [Solanum
            tuberosum]
          Length = 315

 Score = 74.3 bits (181), Expect = 9e-11
 Identities = 34/36 (94%), Positives = 36/36 (100%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            IDYTNY+DMKYAIKKLDDSEFRNAFSRATIRVK+YD
Sbjct: 159  IDYTNYDDMKYAIKKLDDSEFRNAFSRATIRVKEYD 194


>ref|XP_004247421.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Solanum
            lycopersicum]
          Length = 270

 Score = 74.3 bits (181), Expect = 9e-11
 Identities = 34/36 (94%), Positives = 36/36 (100%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            IDYTNY+DMKYAIKKLDDSEFRNAFSRATIRVK+YD
Sbjct: 154  IDYTNYDDMKYAIKKLDDSEFRNAFSRATIRVKEYD 189


>ref|XP_004247420.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Solanum
            lycopersicum]
          Length = 308

 Score = 74.3 bits (181), Expect = 9e-11
 Identities = 34/36 (94%), Positives = 36/36 (100%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            IDYTNY+DMKYAIKKLDDSEFRNAFSRATIRVK+YD
Sbjct: 154  IDYTNYDDMKYAIKKLDDSEFRNAFSRATIRVKEYD 189


>ref|XP_002320345.2| hypothetical protein POPTR_0014s12440g [Populus trichocarpa]
            gi|550324061|gb|EEE98660.2| hypothetical protein
            POPTR_0014s12440g [Populus trichocarpa]
          Length = 296

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNYEDMKYAIKKLDDSEFRNAFSRA +RV++YD
Sbjct: 154  VDYTNYEDMKYAIKKLDDSEFRNAFSRAYVRVREYD 189


>gb|EXC10292.1| Pre-mRNA-splicing factor SF2 [Morus notabilis]
          Length = 389

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTN+EDMKYAIKKLDDSEFRNAFSRA +RVK+YD
Sbjct: 154  VDYTNHEDMKYAIKKLDDSEFRNAFSRAYVRVKEYD 189


>ref|XP_006382471.1| hypothetical protein POPTR_0005s02450g [Populus trichocarpa]
            gi|550337832|gb|ERP60268.1| hypothetical protein
            POPTR_0005s02450g [Populus trichocarpa]
          Length = 283

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAIKKLDDSEFRNAFSRA IRV++YD
Sbjct: 152  VDYTNYDDMKYAIKKLDDSEFRNAFSRAYIRVREYD 187


>ref|XP_006382470.1| hypothetical protein POPTR_0005s02450g [Populus trichocarpa]
            gi|550337831|gb|ERP60267.1| hypothetical protein
            POPTR_0005s02450g [Populus trichocarpa]
          Length = 264

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAIKKLDDSEFRNAFSRA IRV++YD
Sbjct: 152  VDYTNYDDMKYAIKKLDDSEFRNAFSRAYIRVREYD 187


>ref|XP_006375743.1| hypothetical protein POPTR_0013s01700g [Populus trichocarpa]
            gi|566198865|ref|XP_002318990.2| hypothetical protein
            POPTR_0013s01700g [Populus trichocarpa]
            gi|550324708|gb|ERP53540.1| hypothetical protein
            POPTR_0013s01700g [Populus trichocarpa]
            gi|550324709|gb|EEE94913.2| hypothetical protein
            POPTR_0013s01700g [Populus trichocarpa]
          Length = 296

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAIKKLDDSEFRNAFSRA IRV++YD
Sbjct: 152  VDYTNYDDMKYAIKKLDDSEFRNAFSRAYIRVREYD 187


>ref|XP_006375742.1| hypothetical protein POPTR_0013s01700g [Populus trichocarpa]
            gi|550324707|gb|ERP53539.1| hypothetical protein
            POPTR_0013s01700g [Populus trichocarpa]
          Length = 260

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAIKKLDDSEFRNAFSRA IRV++YD
Sbjct: 152  VDYTNYDDMKYAIKKLDDSEFRNAFSRAYIRVREYD 187


>gb|EPS63380.1| hypothetical protein M569_11405, partial [Genlisea aurea]
          Length = 278

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAIKKLDDSEFRNAFSR  IRVK+YD
Sbjct: 154  VDYTNYDDMKYAIKKLDDSEFRNAFSRGRIRVKEYD 189


>ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
            gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing
            factor, putative [Ricinus communis]
          Length = 292

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNYEDMK+AIKKLDDSEFRNAFSRA +RVK+YD
Sbjct: 152  VDYTNYEDMKHAIKKLDDSEFRNAFSRAYVRVKEYD 187


>ref|XP_002330215.1| predicted protein [Populus trichocarpa]
          Length = 226

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAIKKLDDSEFRNAFSRA IRV++YD
Sbjct: 152  VDYTNYDDMKYAIKKLDDSEFRNAFSRAYIRVREYD 187


>gb|EOX95073.1| RNA-binding family protein isoform 3 [Theobroma cacao]
          Length = 268

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 30/36 (83%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAIKKLDDSEFRNAFSRA +RV++YD
Sbjct: 151  VDYTNYDDMKYAIKKLDDSEFRNAFSRAYVRVREYD 186


>gb|EOX95072.1| RNA-binding family protein isoform 2 [Theobroma cacao]
          Length = 309

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 30/36 (83%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAIKKLDDSEFRNAFSRA +RV++YD
Sbjct: 151  VDYTNYDDMKYAIKKLDDSEFRNAFSRAYVRVREYD 186


>gb|EOX95071.1| RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 353

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 30/36 (83%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAIKKLDDSEFRNAFSRA +RV++YD
Sbjct: 151  VDYTNYDDMKYAIKKLDDSEFRNAFSRAYVRVREYD 186


>ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
          Length = 322

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 30/36 (83%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAI+KLDDSEFRNAFSRA +RVK+YD
Sbjct: 151  VDYTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYD 186


>ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
            gi|449498497|ref|XP_004160553.1| PREDICTED:
            pre-mRNA-splicing factor SF2-like [Cucumis sativus]
          Length = 309

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 30/36 (83%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAIKKLDDSEFRNAFSRA +RV++YD
Sbjct: 153  VDYTNYDDMKYAIKKLDDSEFRNAFSRAYVRVREYD 188


>ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
          Length = 315

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 30/36 (83%), Positives = 35/36 (97%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAI+KLDDSEFRNAFSRA +RVK+YD
Sbjct: 144  VDYTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYD 179


>ref|XP_006355802.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Solanum tuberosum]
          Length = 367

 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 30/36 (83%), Positives = 36/36 (100%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAIKKLD+SEFRNAFSR+TIRVK++D
Sbjct: 160  VDYTNYDDMKYAIKKLDESEFRNAFSRSTIRVKEHD 195


>ref|XP_004240541.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Solanum lycopersicum]
          Length = 361

 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 30/36 (83%), Positives = 36/36 (100%)
 Frame = -3

Query: 1200 IDYTNYEDMKYAIKKLDDSEFRNAFSRATIRVKQYD 1093
            +DYTNY+DMKYAIKKLD+SEFRNAFSR+TIRVK++D
Sbjct: 158  VDYTNYDDMKYAIKKLDESEFRNAFSRSTIRVKEHD 193


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