BLASTX nr result

ID: Atropa21_contig00016111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00016111
         (1374 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312197.1| hypothetical protein POPTR_0008s07580g [Popu...   128   1e-84
gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]             236   3e-72
ref|XP_004250504.1| PREDICTED: endoribonuclease Dicer homolog 2-...   199   1e-66
gb|EXB88160.1| Endoribonuclease Dicer-2-like protein [Morus nota...   135   1e-63
gb|EMS67761.1| Endoribonuclease Dicer-like protein 2a [Triticum ...    87   5e-61
ref|XP_006480490.1| PREDICTED: endoribonuclease Dicer homolog 2-...   153   1e-60
ref|XP_006480488.1| PREDICTED: endoribonuclease Dicer homolog 2-...   153   1e-60
ref|XP_006428678.1| hypothetical protein CICLE_v10010911mg [Citr...   152   4e-60
ref|XP_006480493.1| PREDICTED: endoribonuclease Dicer homolog 2-...   145   2e-55
ref|XP_006428679.1| hypothetical protein CICLE_v10010912mg [Citr...   145   2e-55
gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]                   144   2e-52
ref|XP_004250068.1| PREDICTED: endoribonuclease Dicer homolog 2-...   193   4e-52
gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana]       139   7e-51
gb|ABF19798.1| dicer-like 2 spliceform 2 [Arabidopsis thaliana]       139   7e-51
gb|AAF26098.1|AC012328_1 unknown protein [Arabidopsis thaliana]       137   2e-50
ref|NP_566199.4| endoribonuclease Dicer-like 2 [Arabidopsis thal...   137   2e-50
ref|NP_001078101.1| endoribonuclease Dicer-like 2 [Arabidopsis t...   137   2e-50
ref|XP_002884369.1| hypothetical protein ARALYDRAFT_317213 [Arab...   134   2e-46
ref|XP_002315119.1| hypothetical protein POPTR_0010s18870g [Popu...   152   6e-41
ref|XP_003559709.1| PREDICTED: endoribonuclease Dicer homolog 2a...   102   6e-41

>ref|XP_002312197.1| hypothetical protein POPTR_0008s07580g [Populus trichocarpa]
            gi|222852017|gb|EEE89564.1| hypothetical protein
            POPTR_0008s07580g [Populus trichocarpa]
          Length = 1468

 Score =  128 bits (321), Expect(5) = 1e-84
 Identities = 64/113 (56%), Positives = 77/113 (68%)
 Frame = +1

Query: 1    NHHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFL 180
            NHHEGLLS KK+KIISNA LC+ G   K+ GFI NE  D K W+IPG         EE L
Sbjct: 1086 NHHEGLLSFKKDKIISNAALCRRGCNHKLQGFIRNESFDPKLWIIPGGKLGSDFLSEEPL 1145

Query: 181  MPSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLV 339
                KIY RG+ K+K K +ADVVEALI AYLS+GGE+ AL FM W+G+ +D +
Sbjct: 1146 SKGRKIYIRGRRKVKSKTIADVVEALIGAYLSTGGEVTALLFMDWIGIKVDFM 1198



 Score = 94.4 bits (233), Expect(5) = 1e-84
 Identities = 45/64 (70%), Positives = 50/64 (78%)
 Frame = +3

Query: 333  FGYAPLPRHFPMNAEKIVNVRYLESVLHYRFNDPSLLVEALTHGSYMLPEIPRCYQMITW 512
            F   P  RH  + AEK VNVRYLES+L+Y FNDPSLLVEALTHGSYMLPEIPRCYQ + +
Sbjct: 1197 FMNTPYERHIQLQAEKFVNVRYLESLLNYSFNDPSLLVEALTHGSYMLPEIPRCYQRLEF 1256

Query: 513  LCSA 524
            L  A
Sbjct: 1257 LGDA 1260



 Score = 90.1 bits (222), Expect(5) = 1e-84
 Identities = 41/55 (74%), Positives = 50/55 (90%)
 Frame = +3

Query: 756  QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            ++ET FPKVLGDV+E LAGAI VDSG+NK+  F+SIRPLLEPLITP+T++LQPVR
Sbjct: 1338 ESETAFPKVLGDVIESLAGAILVDSGYNKEVVFESIRPLLEPLITPETLRLQPVR 1392



 Score = 48.5 bits (114), Expect(5) = 1e-84
 Identities = 25/43 (58%), Positives = 32/43 (74%)
 Frame = +2

Query: 983  AYITVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLKECAF 1111
            A +T+EVEA+G+I K T +  DK  AKK+ASK VLK+LKE  F
Sbjct: 1417 ASVTIEVEANGLIFKHTATVADKTTAKKLASKEVLKALKESNF 1459



 Score = 43.9 bits (102), Expect(5) = 1e-84
 Identities = 21/40 (52%), Positives = 26/40 (65%)
 Frame = +1

Query: 637  CYAQSAVKAGLHKRILHASQDLQRQILDTVEHFENLDLVS 756
            CYA SAVK GL + ILHAS DL + I+ TV+  +   L S
Sbjct: 1294 CYALSAVKVGLDRHILHASHDLHKHIVATVKKIQEFSLES 1333



 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 33/51 (64%), Positives = 41/51 (80%)
 Frame = +2

Query: 485  STMLSDDHLAMQRLEFLGDAVLDYVVTAHLHFKYPGPTPGLITDLRSASVN 637
            S ML +     QRLEFLGDAVLDY++T H++ +YPG +PGL+TDLRSASVN
Sbjct: 1241 SYMLPEIPRCYQRLEFLGDAVLDYLITLHMYKEYPGMSPGLLTDLRSASVN 1291


>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
          Length = 1403

 Score =  236 bits (603), Expect(2) = 3e-72
 Identities = 165/349 (47%), Positives = 202/349 (57%), Gaps = 20/349 (5%)
 Frame = +1

Query: 4    HHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFLM 183
            HHEGLL+VKKNKIISNA LCKLG ARKIPGFI +EP DLK WLIPGD+SQV  FDEE LM
Sbjct: 1029 HHEGLLTVKKNKIISNAALCKLGCARKIPGFIRSEPFDLKGWLIPGDNSQVQNFDEELLM 1088

Query: 184  PSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGTS 363
            PSVK+YSRG+ KIK KRVADVVEALI A+LSSGGE+AALSFMKWLG+DID V       +
Sbjct: 1089 PSVKMYSRGRQKIKSKRVADVVEALIGAFLSSGGEVAALSFMKWLGVDIDFV----DAPT 1144

Query: 364  P*MLRRLSMSDTWNPCYITGSMILLCLLKH*LTDPTCYLRFHDAIR*SPGYAALGISWRC 543
            P   R   M    N   +     L  LL +   DP+  +   +A+  + G   L    RC
Sbjct: 1145 P---RHFPM----NAEKLVNVRYLESLLDYKFHDPSLLV---EAL--THGSYMLPEIPRC 1192

Query: 544  SARLCCYSTSPFQISRTNSRTYY*F---------EVRLC----KCYAQSAVKAGLHKRIL 684
              RL     +    + T +  Y+ +         ++R      +CYAQ+AVKAGLHK IL
Sbjct: 1193 YQRLEFLGDAVLDYAVT-AHLYFKYPGLSPGFITDLRSASVNNECYAQAAVKAGLHKHIL 1251

Query: 685  HASQDLQRQILDTVEHFENLDLVSRL----KLLFQRCXXXXXXXXXXXXXXXXXXTKILH 852
            HASQDLQRQI++TV +FE LD  S      +  F +                    K + 
Sbjct: 1252 HASQDLQRQIVNTVLNFEKLDPASTFGWESETTFPKVLGDVIESLAGAIFVDSGFNKDVV 1311

Query: 853  FRAYDLFWNR*LHLRQ*SFNQ-*ELSELCDQKGYI--KDIVSRENGGIY 990
            F++        +       +   ELSELCDQKGYI  K++VSRENG  Y
Sbjct: 1312 FQSVRTLLEPLITPDTVKLHPVRELSELCDQKGYIKKKNVVSRENGVAY 1360



 Score = 64.3 bits (155), Expect(2) = 3e-72
 Identities = 35/46 (76%), Positives = 37/46 (80%)
 Frame = +2

Query: 980  VAYITVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLKECAFNA 1117
            VAYITVEVEADGV HK TCS  DK MA+KVA KNVLK LKE A +A
Sbjct: 1358 VAYITVEVEADGVSHKFTCSERDKKMAEKVACKNVLKLLKEFASDA 1403


>ref|XP_004250504.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Solanum
            lycopersicum]
          Length = 1402

 Score =  180 bits (456), Expect(3) = 1e-66
 Identities = 106/210 (50%), Positives = 128/210 (60%), Gaps = 7/210 (3%)
 Frame = +3

Query: 312  MAWAGH*--FGYAPLPRHFPMNAEKIVNVRYLESVLHYRFNDPSLLVEALTHGSYMLPEI 485
            M W G    F  AP+ RHFP+NAEK+VNV+YLES+LHY+F+DPSLLVEALTHGSYMLPEI
Sbjct: 1131 MKWLGMDIDFADAPIQRHFPLNAEKLVNVKYLESLLHYKFHDPSLLVEALTHGSYMLPEI 1190

Query: 486  PRCYQMITWLCSAWNFLEMQC*IMLLQHISISNXXXXXXXXXXXXGPPL*MLCSICSQGW 665
            PRCYQ + +L  A   L+     ++  H+                   +   C       
Sbjct: 1191 PRCYQRLEFLGDA--VLDY----VVTAHLYFKYPGLSPGLITDLRSASVNNEC-YAQCAI 1243

Query: 666  SAQAHSSCLARSTKADIRYC*AFREFGSCV-----QAETTFPKVLGDVVEFLAGAIFVDS 830
             A  H   L  S     + C    +F + V     +AETTFPKVL DV+E LAGAIFVDS
Sbjct: 1244 KASLHKHILHASPDLQRQICNTIEDFKNPVSTFGWEAETTFPKVLADVIESLAGAIFVDS 1303

Query: 831  GFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            GFN+DTTFQ IRPLLEPL+TPQT+K  PVR
Sbjct: 1304 GFNQDTTFQCIRPLLEPLVTPQTLKPHPVR 1333



 Score = 81.3 bits (199), Expect(3) = 1e-66
 Identities = 38/46 (82%), Positives = 43/46 (93%)
 Frame = +2

Query: 980  VAYITVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLKECAFNA 1117
            VAYITVE++ADGV HKSTCSG DK+MAKKVA KNVLKSLKEC++NA
Sbjct: 1357 VAYITVEIDADGVTHKSTCSGRDKIMAKKVACKNVLKSLKECSYNA 1402



 Score = 42.0 bits (97), Expect(3) = 1e-66
 Identities = 20/26 (76%), Positives = 22/26 (84%), Gaps = 2/26 (7%)
 Frame = +1

Query: 919  ELSELCDQKGYI--KDIVSRENGGIY 990
            ELSELCDQKGY+  KD+VSRENG  Y
Sbjct: 1334 ELSELCDQKGYVKKKDVVSRENGVAY 1359



 Score =  199 bits (505), Expect = 3e-48
 Identities = 128/259 (49%), Positives = 149/259 (57%), Gaps = 12/259 (4%)
 Frame = +1

Query: 1    NHHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFL 180
            NHHEGLL VKK+KIISNA LCKLG ARKIPGFI NE   L+ W+IPGDSSQVH F+EE +
Sbjct: 1029 NHHEGLLCVKKSKIISNAALCKLGCARKIPGFIRNEAFTLQAWIIPGDSSQVHSFNEELM 1088

Query: 181  MPSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGT 360
              S K+YSR K KI+ KRVADVVEALI AYLSSGGE+AALS MKWLG+DID      Q  
Sbjct: 1089 TSSDKMYSRIKQKIRSKRVADVVEALIGAYLSSGGEVAALSLMKWLGMDIDFADAPIQRH 1148

Query: 361  SP*MLRRLSMSDTWNPCYITGSM--------ILLCLLKH*L----TDPTCYLRFHDAIR* 504
             P     L+     N  Y+   +        +L+  L H        P CY R       
Sbjct: 1149 FP-----LNAEKLVNVKYLESLLHYKFHDPSLLVEALTHGSYMLPEIPRCYQRLEFL--- 1200

Query: 505  SPGYAALGISWRCSARLCCYSTSPFQISRTNSRTYY*FEVRLCKCYAQSAVKAGLHKRIL 684
              G A L               SP  I+   S +         +CYAQ A+KA LHK IL
Sbjct: 1201 --GDAVLDYVVTAHLYFKYPGLSPGLITDLRSASVN------NECYAQCAIKASLHKHIL 1252

Query: 685  HASQDLQRQILDTVEHFEN 741
            HAS DLQRQI +T+E F+N
Sbjct: 1253 HASPDLQRQICNTIEDFKN 1271


>gb|EXB88160.1| Endoribonuclease Dicer-2-like protein [Morus notabilis]
          Length = 1429

 Score =  135 bits (341), Expect(3) = 1e-63
 Identities = 68/112 (60%), Positives = 83/112 (74%)
 Frame = +1

Query: 1    NHHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFL 180
            N+HEGLLSVKK+KIISNA LCK G  RK+PGFI +E  D K W+IPGDSS      E+ L
Sbjct: 1022 NNHEGLLSVKKDKIISNAALCKFGCERKLPGFIRDEYFDPKNWIIPGDSSTNKALLEDVL 1081

Query: 181  MPSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDL 336
                 IY +G  K+K KRVADVVEALI A+LS+GGE+ A+ FM WLG+++DL
Sbjct: 1082 PNEKIIYIKGTKKMKSKRVADVVEALIGAFLSTGGEIPAVKFMNWLGIEVDL 1133



 Score =  115 bits (289), Expect(3) = 1e-63
 Identities = 85/247 (34%), Positives = 120/247 (48%), Gaps = 53/247 (21%)
 Frame = +3

Query: 339  YAPLPRHFPMNAEKIVNVRYLESVLHYRFNDPSLLVEALTHGSYMLPEI----------- 485
            + P   HF + +++++N+++LE +L+Y F D SLLVEALTHGSYMLPEI           
Sbjct: 1135 FKPYETHFQVQSDRLLNIKHLEFLLNYTFRDRSLLVEALTHGSYMLPEIPRCYQFLLNYT 1194

Query: 486  ---------------------PRCYQMITWLCSAWNFLEMQC*IMLLQHISISNXXXXXX 602
                                 PRCYQ + +L  A           +L ++   +      
Sbjct: 1195 FRDHSLLVEALTHGSYMLPEIPRCYQRLEFLGDA-----------VLDYVITMHFYNTYP 1243

Query: 603  XXXXXXGPPL*MLCSICSQGWSAQAHSSCLARS-TKADIRYC*AF------REFGSCV-- 755
                       M     +   SA  ++ C A S  KA ++    +      +E  + +  
Sbjct: 1244 G----------MSPEKLTDMRSASVNNDCYALSAVKAGLQKHILYTSHQLHKEIANTIIN 1293

Query: 756  ----QAETTF--------PKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQT 899
                 +E+TF        PKVLGDV+E LAGAIFVDSG++K+  FQSIRPLLEPLITP+T
Sbjct: 1294 FEKLSSESTFGWESETSFPKVLGDVIESLAGAIFVDSGYDKELVFQSIRPLLEPLITPET 1353

Query: 900  VKLQPVR 920
            VKL P +
Sbjct: 1354 VKLHPAK 1360



 Score = 41.2 bits (95), Expect(3) = 1e-63
 Identities = 21/40 (52%), Positives = 30/40 (75%)
 Frame = +2

Query: 980  VAYITVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLK 1099
            V+ IT+EVEA+GV ++ T +  DK + KKVA K VL++LK
Sbjct: 1384 VSSITIEVEANGVTYRHTSNVSDKKIGKKVACKEVLEALK 1423


>gb|EMS67761.1| Endoribonuclease Dicer-like protein 2a [Triticum urartu]
          Length = 537

 Score = 87.4 bits (215), Expect(6) = 5e-61
 Identities = 45/114 (39%), Positives = 69/114 (60%)
 Frame = +1

Query: 7   HEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFLMP 186
           HEG L+  K  +ISNA LC+L  +  + G+I  E  + K W+IPG    +    +   + 
Sbjct: 166 HEGTLTKMKKNLISNAALCQLACSNNLVGYIQGEEFNPKGWIIPGLGYDMCGNSKISFLS 225

Query: 187 SVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHL 348
           S  +++  K+ ++ KR+AD VEALI AYL + GE AA  F+K LGLDI+  +++
Sbjct: 226 SNDMHTLRKMSVRSKRIADTVEALIGAYLGAAGEQAAFVFLKSLGLDIEFHSNI 279



 Score = 64.3 bits (155), Expect(6) = 5e-61
 Identities = 29/56 (51%), Positives = 44/56 (78%)
 Frame = +3

Query: 756 QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVRV 923
           +A    PKVLGDV+E LAGAI++DS ++K+  ++S++ LLEPL TP+TV+  PV++
Sbjct: 417 EAGIGLPKVLGDVIESLAGAIYLDSKYDKEVVWKSMKQLLEPLATPETVERDPVKL 472



 Score = 62.8 bits (151), Expect(6) = 5e-61
 Identities = 31/60 (51%), Positives = 37/60 (61%)
 Frame = +3

Query: 345 PLPRHFPMNAEKIVNVRYLESVLHYRFNDPSLLVEALTHGSYMLPEIPRCYQMITWLCSA 524
           PL R   + +EK +NVR LE +L Y F D SLLVEALTHGSY       CYQ + +L  A
Sbjct: 280 PLERKIVLKSEKFINVRSLEMILGYEFKDTSLLVEALTHGSYQTAGATACYQRLEFLGDA 339



 Score = 58.2 bits (139), Expect(6) = 5e-61
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +2

Query: 518 QRLEFLGDAVLDYVVTAHLHFKYPGPTPGLITDLRSASVN 637
           QRLEFLGDAVLDY+ T + + +YP  TP L+TDLRSASVN
Sbjct: 331 QRLEFLGDAVLDYLFTIYFYNQYPECTPELLTDLRSASVN 370



 Score = 37.7 bits (86), Expect(6) = 5e-61
 Identities = 16/40 (40%), Positives = 30/40 (75%)
 Frame = +2

Query: 980  VAYITVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLK 1099
            V+ +  EV+ +G  + +T +G DK++AKK+A+K++L +LK
Sbjct: 494  VSSVVAEVQVEGTTYTATETGPDKIVAKKLAAKSLLNNLK 533



 Score = 35.0 bits (79), Expect(6) = 5e-61
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +1

Query: 637 CYAQSAVKAGLHKRILHASQDLQRQILDTVEHFE 738
           CYA +A KAGL+K ILH+S  L  ++    E+F+
Sbjct: 373 CYAHAAAKAGLNKHILHSSLQLHGRMAYYFENFK 406


>ref|XP_006480490.1| PREDICTED: endoribonuclease Dicer homolog 2-like isoform X3 [Citrus
            sinensis] gi|568853715|ref|XP_006480491.1| PREDICTED:
            endoribonuclease Dicer homolog 2-like isoform X4 [Citrus
            sinensis] gi|568853717|ref|XP_006480492.1| PREDICTED:
            endoribonuclease Dicer homolog 2-like isoform X5 [Citrus
            sinensis]
          Length = 1401

 Score =  153 bits (387), Expect(3) = 1e-60
 Identities = 105/259 (40%), Positives = 139/259 (53%), Gaps = 7/259 (2%)
 Frame = +1

Query: 1    NHHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFL 180
            NHHEGLLSVKK++IISNA LCKLG   K+PGFI  EP D K W+IPGD+S  ++ ++  L
Sbjct: 1021 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL 1080

Query: 181  MPSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGT 360
                KIY  G+ K+K K VADVVEALI A+LS+GGE   L F+  +G+ +D V    +  
Sbjct: 1081 FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQ 1140

Query: 361  SP*MLRRL----SMSDTWNPCYITGSMILLCLL--KH*LTD-PTCYLRFHDAIR*SPGYA 519
                + RL     +    N  +   S+++  L    + L + P CY R         G A
Sbjct: 1141 FQVQVERLVNVRHLESLLNYSFCDPSLLVEALTHGSYMLPEIPRCYQRLEFL-----GDA 1195

Query: 520  ALGISWRCSARLCCYSTSPFQISRTNSRTYY*FEVRLCKCYAQSAVKAGLHKRILHASQD 699
             L             + SP  ++   S +          CYA S+VK GLHK ILHASQ+
Sbjct: 1196 VLDYLITVYLYNKYPTLSPGDLTDMRSASVN------NDCYALSSVKHGLHKHILHASQE 1249

Query: 700  LQRQILDTVEHFENLDLVS 756
            L + I  TV+ FE L L S
Sbjct: 1250 LYKWINITVDSFERLSLES 1268



 Score = 85.5 bits (210), Expect(3) = 1e-60
 Identities = 37/55 (67%), Positives = 49/55 (89%)
 Frame = +3

Query: 756  QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            ++ET+FPK LGD++E L+GAIFVDSG NK+  F+SIRPLLEP+ITP+T++LQP R
Sbjct: 1273 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR 1327



 Score = 43.9 bits (102), Expect(3) = 1e-60
 Identities = 24/39 (61%), Positives = 28/39 (71%)
 Frame = +2

Query: 983  AYITVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLK 1099
            A +TVEV A+G + K T +  DK  AKKVASK VLKSLK
Sbjct: 1352 AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 1390


>ref|XP_006480488.1| PREDICTED: endoribonuclease Dicer homolog 2-like isoform X1 [Citrus
            sinensis] gi|568853711|ref|XP_006480489.1| PREDICTED:
            endoribonuclease Dicer homolog 2-like isoform X2 [Citrus
            sinensis]
          Length = 1401

 Score =  153 bits (387), Expect(3) = 1e-60
 Identities = 105/259 (40%), Positives = 139/259 (53%), Gaps = 7/259 (2%)
 Frame = +1

Query: 1    NHHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFL 180
            NHHEGLLSVKK++IISNA LCKLG   K+PGFI  EP D K W+IPGD+S  ++ ++  L
Sbjct: 1021 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL 1080

Query: 181  MPSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGT 360
                KIY  G+ K+K K VADVVEALI A+LS+GGE   L F+  +G+ +D V    +  
Sbjct: 1081 FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQ 1140

Query: 361  SP*MLRRL----SMSDTWNPCYITGSMILLCLL--KH*LTD-PTCYLRFHDAIR*SPGYA 519
                + RL     +    N  +   S+++  L    + L + P CY R         G A
Sbjct: 1141 FQVQVERLVNVRHLESLLNYSFCDPSLLVEALTHGSYMLPEIPRCYQRLEFL-----GDA 1195

Query: 520  ALGISWRCSARLCCYSTSPFQISRTNSRTYY*FEVRLCKCYAQSAVKAGLHKRILHASQD 699
             L             + SP  ++   S +          CYA S+VK GLHK ILHASQ+
Sbjct: 1196 VLDYLITVYLYNKYPTLSPGDLTDMRSASVN------NDCYALSSVKHGLHKHILHASQE 1249

Query: 700  LQRQILDTVEHFENLDLVS 756
            L + I  TV+ FE L L S
Sbjct: 1250 LYKWINITVDSFERLSLES 1268



 Score = 85.5 bits (210), Expect(3) = 1e-60
 Identities = 37/55 (67%), Positives = 49/55 (89%)
 Frame = +3

Query: 756  QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            ++ET+FPK LGD++E L+GAIFVDSG NK+  F+SIRPLLEP+ITP+T++LQP R
Sbjct: 1273 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR 1327



 Score = 43.9 bits (102), Expect(3) = 1e-60
 Identities = 24/39 (61%), Positives = 28/39 (71%)
 Frame = +2

Query: 983  AYITVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLK 1099
            A +TVEV A+G + K T +  DK  AKKVASK VLKSLK
Sbjct: 1352 AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 1390


>ref|XP_006428678.1| hypothetical protein CICLE_v10010911mg [Citrus clementina]
            gi|557530735|gb|ESR41918.1| hypothetical protein
            CICLE_v10010911mg [Citrus clementina]
          Length = 1401

 Score =  152 bits (383), Expect(3) = 4e-60
 Identities = 105/259 (40%), Positives = 139/259 (53%), Gaps = 7/259 (2%)
 Frame = +1

Query: 1    NHHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFL 180
            NHHEGLLSVKK++IISNA LCKLG   K+PGFI  EP D K W+IPGD+S  ++ ++  L
Sbjct: 1021 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL 1080

Query: 181  MPSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGT 360
                KIY  G+ K+K K VADVVEALI A+LS+GGE   L F+  +G+ +D V    +  
Sbjct: 1081 FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQ 1140

Query: 361  SP*MLRRL----SMSDTWNPCYITGSMILLCLL--KH*LTD-PTCYLRFHDAIR*SPGYA 519
                + RL     +    N  +   S+++  L    + L + P CY R         G A
Sbjct: 1141 FQVQVERLVNVRHLELLLNYSFCDPSLLVEALTHGSYMLPEIPRCYQRLEFL-----GDA 1195

Query: 520  ALGISWRCSARLCCYSTSPFQISRTNSRTYY*FEVRLCKCYAQSAVKAGLHKRILHASQD 699
             L             + SP  ++   S +          CYA S+VK GLHK ILHASQ+
Sbjct: 1196 VLDYLITVYLYNKYPTLSPGDLTDMRSASVN------NDCYALSSVKHGLHKHILHASQE 1249

Query: 700  LQRQILDTVEHFENLDLVS 756
            L + I  TV+ FE L L S
Sbjct: 1250 LYKWINITVDSFERLSLES 1268



 Score = 85.5 bits (210), Expect(3) = 4e-60
 Identities = 37/55 (67%), Positives = 49/55 (89%)
 Frame = +3

Query: 756  QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            ++ET+FPK LGD++E L+GAIFVDSG NK+  F+SIRPLLEP+ITP+T++LQP R
Sbjct: 1273 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR 1327



 Score = 43.9 bits (102), Expect(3) = 4e-60
 Identities = 24/39 (61%), Positives = 28/39 (71%)
 Frame = +2

Query: 983  AYITVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLK 1099
            A +TVEV A+G + K T +  DK  AKKVASK VLKSLK
Sbjct: 1352 AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 1390


>ref|XP_006480493.1| PREDICTED: endoribonuclease Dicer homolog 2-like isoform X6 [Citrus
            sinensis]
          Length = 1396

 Score =  145 bits (367), Expect(3) = 2e-55
 Identities = 103/259 (39%), Positives = 137/259 (52%), Gaps = 7/259 (2%)
 Frame = +1

Query: 1    NHHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFL 180
            N+HEGLLSVKK +IISNA LCKLG  +K+PGFI  E  D K W+IPGD+S  ++ +++ L
Sbjct: 1021 NNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSL 1080

Query: 181  MPSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGT 360
                KIY  G+ K+K K VADVVEALI A+LS+GGE   L F+  +G+ +D V    Q  
Sbjct: 1081 FNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQ 1140

Query: 361  SP*MLRRL----SMSDTWNPCYITGSMILLCLL--KH*LTD-PTCYLRFHDAIR*SPGYA 519
                  RL     +    N  +   S+++  L    + L + P CY R         G A
Sbjct: 1141 FQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL-----GDA 1195

Query: 520  ALGISWRCSARLCCYSTSPFQISRTNSRTYY*FEVRLCKCYAQSAVKAGLHKRILHASQD 699
             L               SP  ++   S +          CYA S+VK GLHK ILHAS +
Sbjct: 1196 VLDYLITVYLYNKYPGLSPGYLTDMRSASVN------NDCYALSSVKHGLHKHILHASHE 1249

Query: 700  LQRQILDTVEHFENLDLVS 756
            L ++I  TV+ FE L L S
Sbjct: 1250 LYKRINITVDSFEKLSLGS 1268



 Score = 82.0 bits (201), Expect(3) = 2e-55
 Identities = 36/55 (65%), Positives = 47/55 (85%)
 Frame = +3

Query: 756  QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            ++ T+FPK LGD++E LAGAIFVDSG N++  FQSIRPLLEP+ITP+T++  PVR
Sbjct: 1273 ESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVR 1327



 Score = 38.1 bits (87), Expect(3) = 2e-55
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = +2

Query: 983  AYITVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLK 1099
            A +TVEV+A+G + + T    DK  AKKVA K VLKSL+
Sbjct: 1352 AAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390


>ref|XP_006428679.1| hypothetical protein CICLE_v10010912mg [Citrus clementina]
            gi|557530736|gb|ESR41919.1| hypothetical protein
            CICLE_v10010912mg [Citrus clementina]
          Length = 1396

 Score =  145 bits (367), Expect(3) = 2e-55
 Identities = 103/259 (39%), Positives = 137/259 (52%), Gaps = 7/259 (2%)
 Frame = +1

Query: 1    NHHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFL 180
            N+HEGLLSVKK +IISNA LCKLG  +K+PGFI  E  D K W+IPGD+S  ++ +++ L
Sbjct: 1021 NNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSL 1080

Query: 181  MPSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGT 360
                KIY  G+ K+K K VADVVEALI A+LS+GGE   L F+  +G+ +D V    Q  
Sbjct: 1081 FNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQ 1140

Query: 361  SP*MLRRL----SMSDTWNPCYITGSMILLCLL--KH*LTD-PTCYLRFHDAIR*SPGYA 519
                  RL     +    N  +   S+++  L    + L + P CY R         G A
Sbjct: 1141 FQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL-----GDA 1195

Query: 520  ALGISWRCSARLCCYSTSPFQISRTNSRTYY*FEVRLCKCYAQSAVKAGLHKRILHASQD 699
             L               SP  ++   S +          CYA S+VK GLHK ILHAS +
Sbjct: 1196 VLDYLITVYLYNKYPGLSPGYLTDMRSASVN------NDCYALSSVKHGLHKHILHASHE 1249

Query: 700  LQRQILDTVEHFENLDLVS 756
            L ++I  TV+ FE L L S
Sbjct: 1250 LYKRINITVDSFEKLSLGS 1268



 Score = 82.0 bits (201), Expect(3) = 2e-55
 Identities = 36/55 (65%), Positives = 47/55 (85%)
 Frame = +3

Query: 756  QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            ++ T+FPK LGD++E LAGAIFVDSG N++  FQSIRPLLEP+ITP+T++  PVR
Sbjct: 1273 ESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVR 1327



 Score = 38.1 bits (87), Expect(3) = 2e-55
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = +2

Query: 983  AYITVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLK 1099
            A +TVEV+A+G + + T    DK  AKKVA K VLKSL+
Sbjct: 1352 AAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390


>gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]
          Length = 1392

 Score =  144 bits (363), Expect(3) = 2e-52
 Identities = 95/257 (36%), Positives = 132/257 (51%), Gaps = 7/257 (2%)
 Frame = +1

Query: 4    HHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFLM 183
            HHEGLLS  K+++ISN TLCK G  +K+ GFI NE  + K W++PG SS  +    ++L 
Sbjct: 1019 HHEGLLSTIKDEMISNVTLCKFGCNQKLQGFIRNECFEPKGWMVPGQSSAAYALVNDYLS 1078

Query: 184  PSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGTS 363
             S  +Y   ++ +K K VADVVEALI AYLS GGELAAL+FM W+G+ +D  T + Q   
Sbjct: 1079 ESRNMYIARRMNLKRKSVADVVEALIGAYLSEGGELAALTFMNWVGIKVDFTTTMIQREP 1138

Query: 364  P*MLRRL----SMSDTWNPCYITGSMILLCLL--KH*LTD-PTCYLRFHDAIR*SPGYAA 522
                 +L     M    N  +   S+++  L    + + + P CY R          Y  
Sbjct: 1139 SIQAEKLVNVRYMESLLNYKFKDKSLLVEALTHGSYMIPEIPRCYQRLEFLGDSVLDYLI 1198

Query: 523  LGISWRCSARLCCYSTSPFQISRTNSRTYY*FEVRLCKCYAQSAVKAGLHKRILHASQDL 702
                +     L     +  + +  N+           +CYAQ AVK+ LHK +LHAS DL
Sbjct: 1199 TKHLYGEYPNLSPGLLTDMRSASVNN-----------ECYAQVAVKSNLHKHVLHASHDL 1247

Query: 703  QRQILDTVEHFENLDLV 753
             + I  TV  FE L  V
Sbjct: 1248 HKHISRTVSEFERLSSV 1264



 Score = 76.3 bits (186), Expect(3) = 2e-52
 Identities = 36/55 (65%), Positives = 44/55 (80%)
 Frame = +3

Query: 756  QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            ++E  FPKVLGDV+E LAGAI VDSG+NK+  F  I+PLL  +ITP+TVKL PVR
Sbjct: 1271 ESEIAFPKVLGDVIESLAGAIHVDSGYNKEVVFACIKPLLGCMITPETVKLHPVR 1325



 Score = 35.0 bits (79), Expect(3) = 2e-52
 Identities = 20/40 (50%), Positives = 24/40 (60%)
 Frame = +2

Query: 983  AYITVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLKE 1102
            A+  VEVEA  +    T    DK MAKK+A K VL SLK+
Sbjct: 1349 AFFPVEVEAKEMSFAHTARAFDKKMAKKLAYKEVLNSLKK 1388


>ref|XP_004250068.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Solanum
            lycopersicum]
          Length = 1370

 Score =  162 bits (411), Expect(3) = 4e-52
 Identities = 102/214 (47%), Positives = 124/214 (57%), Gaps = 11/214 (5%)
 Frame = +3

Query: 312  MAWAGH*FGY--APLPRHFPMNAEKIVNVRYLESVLHYRFNDPSLLVEALTHGSYMLPEI 485
            M W G    +  AP  RH P+NAEK+VNVRYLES+LHY+FNDPSLLVEAL+HGS MLP+I
Sbjct: 1097 MKWLGVDINFVDAPTSRHLPVNAEKLVNVRYLESLLHYKFNDPSLLVEALSHGSCMLPDI 1156

Query: 486  PRCYQMITWLCSAWNFLEMQC*IMLLQHISISNXXXXXXXXXXXXGPPL*MLCSICSQGW 665
            PRCY+ + +L  A   L+     ++  H+                   +   C   S   
Sbjct: 1157 PRCYKRLEFLGDA--VLDY----VVTTHLYFKYPGLTPGLITDLRSASVNNECYALS-AV 1209

Query: 666  SAQAHSSCL---------ARSTKADIRYC*AFREFGSCVQAETTFPKVLGDVVEFLAGAI 818
             A  H   L           ST  D +       FG   +AETT+PKVL DV+E LAGAI
Sbjct: 1210 KAGLHDHILYDLQVLQRHISSTVEDFKKLNLVSTFGW--EAETTYPKVLADVIESLAGAI 1267

Query: 819  FVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            FVDSGFN+DTTF  IRPLLEPLITPQT+K+ P R
Sbjct: 1268 FVDSGFNQDTTFLCIRPLLEPLITPQTLKVHPAR 1301



 Score = 57.0 bits (136), Expect(3) = 4e-52
 Identities = 28/45 (62%), Positives = 37/45 (82%)
 Frame = +2

Query: 980  VAYITVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLKECAFN 1114
            + Y+TVEVEA+GVIHK + SG ++ MA+KVASK +LKSLKE  +N
Sbjct: 1325 IVYVTVEVEANGVIHKDSNSGRNQKMAEKVASKYLLKSLKEYPYN 1369



 Score = 34.7 bits (78), Expect(3) = 4e-52
 Identities = 17/26 (65%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
 Frame = +1

Query: 919  ELSELCDQKGYI--KDIVSRENGGIY 990
            EL ELC QKGYI  K++V RENG +Y
Sbjct: 1302 ELRELCHQKGYIKQKNVVFRENGIVY 1327



 Score =  193 bits (490), Expect = 2e-46
 Identities = 130/265 (49%), Positives = 161/265 (60%), Gaps = 13/265 (4%)
 Frame = +1

Query: 1    NHHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFL 180
            N H+GLL+VK+ +IISNATLC+LG ARK+PGFI N+P  LK W+IPGD+SQVH FDEE L
Sbjct: 995  NDHQGLLTVKRKQIISNATLCRLGCARKMPGFIRNKPFVLKAWIIPGDNSQVHNFDEELL 1054

Query: 181  MPSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGT 360
              SVK+YSRGK KIK K +ADVVEALI AYLSSGGE+AALSFMKWLG+DI+ V      T
Sbjct: 1055 TSSVKMYSRGKQKIKSKIMADVVEALIGAYLSSGGEVAALSFMKWLGVDINFVD---APT 1111

Query: 361  SP*MLRRLSMSDTWNPCYITGSMILLCLLKH*LTDPTCYLRFHDAIR*SPGYAALGISWR 540
            S    R L +    N   +     L  LL +   DP+  +   +A+  S G   L    R
Sbjct: 1112 S----RHLPV----NAEKLVNVRYLESLLHYKFNDPSLLV---EAL--SHGSCMLPDIPR 1158

Query: 541  CSARLCCYSTSPFQISRTNSRTYY*F---------EVRLC----KCYAQSAVKAGLHKRI 681
            C  RL     +      T +  Y+ +         ++R      +CYA SAVKAGLH  I
Sbjct: 1159 CYKRLEFLGDAVLDYVVT-THLYFKYPGLTPGLITDLRSASVNNECYALSAVKAGLHDHI 1217

Query: 682  LHASQDLQRQILDTVEHFENLDLVS 756
            L+  Q LQR I  TVE F+ L+LVS
Sbjct: 1218 LYDLQVLQRHISSTVEDFKKLNLVS 1242


>gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana]
          Length = 1386

 Score =  139 bits (350), Expect(3) = 7e-51
 Identities = 99/260 (38%), Positives = 131/260 (50%), Gaps = 9/260 (3%)
 Frame = +1

Query: 4    HHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFLM 183
            HHEGLLS KK+ +ISN  LC+ G  +K+ GFI +E  + K W++PG SS  +    + L 
Sbjct: 1018 HHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLVNDTLP 1077

Query: 184  PSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGTS 363
             S  IY   +  +K K VADVVE+LI AYLS GGELAAL FM W+G+ +DL T   Q  S
Sbjct: 1078 ESRNIYVASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDLTTTKIQRDS 1137

Query: 364  P*MLRRL----SMSDTWNPCYITGSMILLCLL--KH*LTD-PTCYLRFHDAIR*SPGYAA 522
            P    +L     M    N  +   S+++  L    + + + P CY R         G + 
Sbjct: 1138 PIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFL-----GDSV 1192

Query: 523  LG--ISWRCSARLCCYSTSPFQISRTNSRTYY*FEVRLCKCYAQSAVKAGLHKRILHASQ 696
            L   I+     +  C S       R+ S           +CYA  AVKA LHK IL+AS 
Sbjct: 1193 LDYLITKHLYDKYPCLSPGLLTDMRSASVNN--------ECYALVAVKANLHKHILYASH 1244

Query: 697  DLQRQILDTVEHFENLDLVS 756
             L + I  TV  FE   L S
Sbjct: 1245 HLHKHISRTVSEFEQSSLQS 1264



 Score = 80.1 bits (196), Expect(3) = 7e-51
 Identities = 37/55 (67%), Positives = 47/55 (85%)
 Frame = +3

Query: 756  QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            +++ +FPKVLGDV+E LAGAIFVDSG+NK+  F SI+PLL  +ITP+TVKL PVR
Sbjct: 1269 ESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVR 1323



 Score = 30.8 bits (68), Expect(3) = 7e-51
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = +2

Query: 992  TVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLK 1099
            TVEV+A  +    T    DK MAKK+A K VL  LK
Sbjct: 1346 TVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLK 1381


>gb|ABF19798.1| dicer-like 2 spliceform 2 [Arabidopsis thaliana]
          Length = 1374

 Score =  139 bits (350), Expect(3) = 7e-51
 Identities = 99/260 (38%), Positives = 131/260 (50%), Gaps = 9/260 (3%)
 Frame = +1

Query: 4    HHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFLM 183
            HHEGLLS KK+ +ISN  LC+ G  +K+ GFI +E  + K W++PG SS  +    + L 
Sbjct: 1006 HHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLVNDTLP 1065

Query: 184  PSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGTS 363
             S  IY   +  +K K VADVVE+LI AYLS GGELAAL FM W+G+ +DL T   Q  S
Sbjct: 1066 ESRNIYVASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDLTTTKIQRDS 1125

Query: 364  P*MLRRL----SMSDTWNPCYITGSMILLCLL--KH*LTD-PTCYLRFHDAIR*SPGYAA 522
            P    +L     M    N  +   S+++  L    + + + P CY R         G + 
Sbjct: 1126 PIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFL-----GDSV 1180

Query: 523  LG--ISWRCSARLCCYSTSPFQISRTNSRTYY*FEVRLCKCYAQSAVKAGLHKRILHASQ 696
            L   I+     +  C S       R+ S           +CYA  AVKA LHK IL+AS 
Sbjct: 1181 LDYLITKHLYDKYPCLSPGLLTDMRSASVNN--------ECYALVAVKANLHKHILYASH 1232

Query: 697  DLQRQILDTVEHFENLDLVS 756
             L + I  TV  FE   L S
Sbjct: 1233 HLHKHISRTVSEFEQSSLQS 1252



 Score = 80.1 bits (196), Expect(3) = 7e-51
 Identities = 37/55 (67%), Positives = 47/55 (85%)
 Frame = +3

Query: 756  QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            +++ +FPKVLGDV+E LAGAIFVDSG+NK+  F SI+PLL  +ITP+TVKL PVR
Sbjct: 1257 ESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVR 1311



 Score = 30.8 bits (68), Expect(3) = 7e-51
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = +2

Query: 992  TVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLK 1099
            TVEV+A  +    T    DK MAKK+A K VL  LK
Sbjct: 1334 TVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLK 1369


>gb|AAF26098.1|AC012328_1 unknown protein [Arabidopsis thaliana]
          Length = 2042

 Score =  137 bits (346), Expect(3) = 2e-50
 Identities = 98/260 (37%), Positives = 130/260 (50%), Gaps = 9/260 (3%)
 Frame = +1

Query: 4    HHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFLM 183
            HHEGLLS KK+ +ISN  LC+ G  +K+ GFI +E  + K W++PG SS  +    + L 
Sbjct: 1674 HHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLVNDTLP 1733

Query: 184  PSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGTS 363
             S  IY   +  +K K VADVVE+LI AYLS GGELAAL FM W+G+ +D  T   Q  S
Sbjct: 1734 ESRNIYVASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTKIQRDS 1793

Query: 364  P*MLRRL----SMSDTWNPCYITGSMILLCLL--KH*LTD-PTCYLRFHDAIR*SPGYAA 522
            P    +L     M    N  +   S+++  L    + + + P CY R         G + 
Sbjct: 1794 PIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFL-----GDSV 1848

Query: 523  LG--ISWRCSARLCCYSTSPFQISRTNSRTYY*FEVRLCKCYAQSAVKAGLHKRILHASQ 696
            L   I+     +  C S       R+ S           +CYA  AVKA LHK IL+AS 
Sbjct: 1849 LDYLITKHLYDKYPCLSPGLLTDMRSASVNN--------ECYALVAVKANLHKHILYASH 1900

Query: 697  DLQRQILDTVEHFENLDLVS 756
             L + I  TV  FE   L S
Sbjct: 1901 HLHKHISRTVSEFEQSSLQS 1920



 Score = 80.1 bits (196), Expect(3) = 2e-50
 Identities = 37/55 (67%), Positives = 47/55 (85%)
 Frame = +3

Query: 756  QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            +++ +FPKVLGDV+E LAGAIFVDSG+NK+  F SI+PLL  +ITP+TVKL PVR
Sbjct: 1925 ESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVR 1979



 Score = 30.8 bits (68), Expect(3) = 2e-50
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = +2

Query: 992  TVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLK 1099
            TVEV+A  +    T    DK MAKK+A K VL  LK
Sbjct: 2002 TVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLK 2037


>ref|NP_566199.4| endoribonuclease Dicer-like 2 [Arabidopsis thaliana]
            gi|334185051|ref|NP_001189798.1| endoribonuclease
            Dicer-like 2 [Arabidopsis thaliana]
            gi|322518659|sp|Q3EBC8.2|DCL2_ARATH RecName:
            Full=Endoribonuclease Dicer homolog 2; AltName:
            Full=Dicer-like protein 2; Short=AtDCL2
            gi|332640403|gb|AEE73924.1| endoribonuclease Dicer-like 2
            [Arabidopsis thaliana] gi|332640405|gb|AEE73926.1|
            endoribonuclease Dicer-like 2 [Arabidopsis thaliana]
          Length = 1388

 Score =  137 bits (346), Expect(3) = 2e-50
 Identities = 98/260 (37%), Positives = 130/260 (50%), Gaps = 9/260 (3%)
 Frame = +1

Query: 4    HHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFLM 183
            HHEGLLS KK+ +ISN  LC+ G  +K+ GFI +E  + K W++PG SS  +    + L 
Sbjct: 1020 HHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLVNDTLP 1079

Query: 184  PSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGTS 363
             S  IY   +  +K K VADVVE+LI AYLS GGELAAL FM W+G+ +D  T   Q  S
Sbjct: 1080 ESRNIYVASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTKIQRDS 1139

Query: 364  P*MLRRL----SMSDTWNPCYITGSMILLCLL--KH*LTD-PTCYLRFHDAIR*SPGYAA 522
            P    +L     M    N  +   S+++  L    + + + P CY R         G + 
Sbjct: 1140 PIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFL-----GDSV 1194

Query: 523  LG--ISWRCSARLCCYSTSPFQISRTNSRTYY*FEVRLCKCYAQSAVKAGLHKRILHASQ 696
            L   I+     +  C S       R+ S           +CYA  AVKA LHK IL+AS 
Sbjct: 1195 LDYLITKHLYDKYPCLSPGLLTDMRSASVNN--------ECYALVAVKANLHKHILYASH 1246

Query: 697  DLQRQILDTVEHFENLDLVS 756
             L + I  TV  FE   L S
Sbjct: 1247 HLHKHISRTVSEFEQSSLQS 1266



 Score = 80.1 bits (196), Expect(3) = 2e-50
 Identities = 37/55 (67%), Positives = 47/55 (85%)
 Frame = +3

Query: 756  QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            +++ +FPKVLGDV+E LAGAIFVDSG+NK+  F SI+PLL  +ITP+TVKL PVR
Sbjct: 1271 ESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVR 1325



 Score = 30.8 bits (68), Expect(3) = 2e-50
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = +2

Query: 992  TVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLK 1099
            TVEV+A  +    T    DK MAKK+A K VL  LK
Sbjct: 1348 TVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLK 1383


>ref|NP_001078101.1| endoribonuclease Dicer-like 2 [Arabidopsis thaliana]
            gi|332640404|gb|AEE73925.1| endoribonuclease Dicer-like 2
            [Arabidopsis thaliana]
          Length = 1374

 Score =  137 bits (346), Expect(3) = 2e-50
 Identities = 98/260 (37%), Positives = 130/260 (50%), Gaps = 9/260 (3%)
 Frame = +1

Query: 4    HHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFLM 183
            HHEGLLS KK+ +ISN  LC+ G  +K+ GFI +E  + K W++PG SS  +    + L 
Sbjct: 1006 HHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLVNDTLP 1065

Query: 184  PSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGTS 363
             S  IY   +  +K K VADVVE+LI AYLS GGELAAL FM W+G+ +D  T   Q  S
Sbjct: 1066 ESRNIYVASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTKIQRDS 1125

Query: 364  P*MLRRL----SMSDTWNPCYITGSMILLCLL--KH*LTD-PTCYLRFHDAIR*SPGYAA 522
            P    +L     M    N  +   S+++  L    + + + P CY R         G + 
Sbjct: 1126 PIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFL-----GDSV 1180

Query: 523  LG--ISWRCSARLCCYSTSPFQISRTNSRTYY*FEVRLCKCYAQSAVKAGLHKRILHASQ 696
            L   I+     +  C S       R+ S           +CYA  AVKA LHK IL+AS 
Sbjct: 1181 LDYLITKHLYDKYPCLSPGLLTDMRSASVNN--------ECYALVAVKANLHKHILYASH 1232

Query: 697  DLQRQILDTVEHFENLDLVS 756
             L + I  TV  FE   L S
Sbjct: 1233 HLHKHISRTVSEFEQSSLQS 1252



 Score = 80.1 bits (196), Expect(3) = 2e-50
 Identities = 37/55 (67%), Positives = 47/55 (85%)
 Frame = +3

Query: 756  QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
            +++ +FPKVLGDV+E LAGAIFVDSG+NK+  F SI+PLL  +ITP+TVKL PVR
Sbjct: 1257 ESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVR 1311



 Score = 30.8 bits (68), Expect(3) = 2e-50
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = +2

Query: 992  TVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLK 1099
            TVEV+A  +    T    DK MAKK+A K VL  LK
Sbjct: 1334 TVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLK 1369


>ref|XP_002884369.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
            lyrata] gi|297330209|gb|EFH60628.1| hypothetical protein
            ARALYDRAFT_317213 [Arabidopsis lyrata subsp. lyrata]
          Length = 2033

 Score =  134 bits (338), Expect(2) = 2e-46
 Identities = 96/260 (36%), Positives = 128/260 (49%), Gaps = 9/260 (3%)
 Frame = +1

Query: 4    HHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFLM 183
            HHEGLLS KK+ +ISN  LC+ G  +K+ GFI NE  + K W++PG  S  +    + L 
Sbjct: 1665 HHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRNECFEPKGWMVPGQHSAAYALVNDTLP 1724

Query: 184  PSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLVTHLCQGTS 363
             S  IY   +  +K K VADVVE+LI AYLS GGEL+AL FM W+G+ +D  T   +  S
Sbjct: 1725 ESRNIYVASRRNLKRKSVADVVESLIGAYLSEGGELSALMFMNWVGIKVDFTTTKIERES 1784

Query: 364  P*MLRRL----SMSDTWNPCYITGSMILLCLL--KH*LTD-PTCYLRFHDAIR*SPGYAA 522
            P    +L     M    N  +   S+++  L    + + + P CY R         G + 
Sbjct: 1785 PIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFL-----GDSV 1839

Query: 523  LG--ISWRCSARLCCYSTSPFQISRTNSRTYY*FEVRLCKCYAQSAVKAGLHKRILHASQ 696
            L   I+     +  C S       R+ S           +CYA  AVK  LHK ILHAS 
Sbjct: 1840 LDYLITKHLYDKYPCLSPGLLTDMRSASVNN--------ECYALVAVKENLHKHILHASH 1891

Query: 697  DLQRQILDTVEHFENLDLVS 756
             L + I  TV  FE   L S
Sbjct: 1892 VLHKHISRTVSEFEQSSLQS 1911



 Score = 80.1 bits (196), Expect(2) = 2e-46
 Identities = 42/97 (43%), Positives = 64/97 (65%)
 Frame = +3

Query: 756  QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVRVK*TM 935
            + + +FPKVLGDV+E LAGAIFVDSG+NK+  F SI+PLL  +ITP+TVKL PVR    +
Sbjct: 1916 ECDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTEL 1975

Query: 936  *PERLYKGHRLS*EWWHILQLRLKQMVLFTRARARDE 1046
              +  ++  +     +  ++++ K+M     A+A D+
Sbjct: 1976 CQKSQFELSKAKDFNYFTVEVKAKEMSFAHTAKASDK 2012


>ref|XP_002315119.1| hypothetical protein POPTR_0010s18870g [Populus trichocarpa]
            gi|222864159|gb|EEF01290.1| hypothetical protein
            POPTR_0010s18870g [Populus trichocarpa]
          Length = 1408

 Score =  152 bits (383), Expect(2) = 6e-41
 Identities = 101/238 (42%), Positives = 127/238 (53%), Gaps = 23/238 (9%)
 Frame = +3

Query: 276  LGRGVSGFIIYEMAWAGH*--FGYAPLPRHFPMNAEKIVNVRYLESVLHYRFNDPSLLVE 449
            L  G     ++ M W G    F   P  RHF + AEK VNVRYLES+L+Y F DPSLLVE
Sbjct: 1115 LSTGGEVLALFFMDWIGIKVDFMIVPYERHFQLQAEKFVNVRYLESLLNYSFRDPSLLVE 1174

Query: 450  ALTHGSYMLPEIPRCYQMITWLCSAWNFLEMQC*IMLLQHISISNXXXXXXXXXXXXGPP 629
            ALTHGSYMLPEIP CYQ + +L  A           +L ++   +               
Sbjct: 1175 ALTHGSYMLPEIPSCYQRLEFLGDA-----------VLDYLITMHLYKEYPG-------- 1215

Query: 630  L*MLCSICSQGWSAQAHSSCLARST-----------------KADIRYC*AFRE--FGSC 752
              M   + +   SA  ++ C A+S                  K  +     F++   GS 
Sbjct: 1216 --MSPGLLTDLRSASVNNDCYAQSAVKGDLHKHILHTSQDLHKHIVETAEIFQKSSLGST 1273

Query: 753  V--QAETTFPKVLGDVVEFLAGAIFVDSGFNKDTTFQSIRPLLEPLITPQTVKLQPVR 920
               ++ET+FPKVLGDV+E LAGAI VDSG+NK+  FQSIRPLLEPLITP TV+L P R
Sbjct: 1274 FGWESETSFPKVLGDVIESLAGAILVDSGYNKEIVFQSIRPLLEPLITPATVRLHPAR 1331



 Score = 44.3 bits (103), Expect(2) = 6e-41
 Identities = 25/43 (58%), Positives = 29/43 (67%)
 Frame = +2

Query: 983  AYITVEVEADGVIHKSTCSG*DKVMAKKVASKNVLKSLKECAF 1111
            A IT+ V A+GV  K T +  DK  AKK+ASK VLKSLKE  F
Sbjct: 1356 ASITIVVGANGVTFKHTATAADKKTAKKLASKEVLKSLKESNF 1398



 Score =  134 bits (338), Expect = 7e-29
 Identities = 67/113 (59%), Positives = 79/113 (69%)
 Frame = +1

Query: 1    NHHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFL 180
            NHHEGLLS+KK KIISNA LC+ G   K+PGFI NE  D K W+IPGD        EE L
Sbjct: 1025 NHHEGLLSMKKEKIISNAALCRRGCDHKLPGFIRNESFDPKLWMIPGDKCGSDLLSEEPL 1084

Query: 181  MPSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDIDLV 339
                KIY RG+ K+K K VADVVEALI AYLS+GGE+ AL FM W+G+ +D +
Sbjct: 1085 SECRKIYVRGRRKVKSKTVADVVEALIGAYLSTGGEVLALFFMDWIGIKVDFM 1137


>ref|XP_003559709.1| PREDICTED: endoribonuclease Dicer homolog 2a-like [Brachypodium
            distachyon]
          Length = 1402

 Score =  102 bits (253), Expect(3) = 6e-41
 Identities = 69/207 (33%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
 Frame = +3

Query: 345  PLPRHFPMNAEKIVNVRYLESVLHYRFNDPSLLVEALTHGSYMLPEIPRCYQMITWLCSA 524
            P+ R+  +  E+ +N+R LE +L Y F DP LL+EALTHGSY +     CYQ + +L  A
Sbjct: 1129 PIERNIVIKPEEFINIRSLEIILGYNFKDPLLLIEALTHGSYQIAGPTACYQRLEFLGDA 1188

Query: 525  WNFLEMQC*IMLLQHISISNXXXXXXXXXXXXGPPL*MLCSICSQGWSAQAHSSCLA--- 695
                       +L H+                 P L       S   +  AH+S  A   
Sbjct: 1189 -----------VLDHL----VTVYYYNTYPECTPALLTDLRSASVNNNCYAHASVKAGLN 1233

Query: 696  -----RSTKADIRYC*AFREFGSCV-------QAETTFPKVLGDVVEFLAGAIFVDSGFN 839
                  ST+   +       FG          +A    PKVLGDV+E +AGAI++DS ++
Sbjct: 1234 KHILHSSTELHRKMAYYLENFGQAFTGPSHGWEAGIGLPKVLGDVIESIAGAIYLDSKYD 1293

Query: 840  KDTTFQSIRPLLEPLITPQTVKLQPVR 920
            K+  ++S++PLLEPL TP+TV+  PV+
Sbjct: 1294 KEMVWRSMKPLLEPLATPETVERDPVK 1320



 Score = 90.1 bits (222), Expect(3) = 6e-41
 Identities = 50/109 (45%), Positives = 65/109 (59%)
 Frame = +1

Query: 4    HHEGLLSVKKNKIISNATLCKLGSARKIPGFIHNEPLDLKTWLIPGDSSQVHKFDEEFLM 183
            HHEG L+  K  +ISNA LC+L     + G+I  E  + K W IPG        ++ F +
Sbjct: 1015 HHEGTLTKMKKNLISNAALCQLACNNNLVGYIQGEVFNPKGWFIPGLGYDTCG-NKSFCL 1073

Query: 184  PSVKIYSRGKLKIKCKRVADVVEALICAYLSSGGELAALSFMKWLGLDI 330
             S  +YS  K+ IK KR+AD VEALI AYLS+ GE AA  F+  LG+DI
Sbjct: 1074 SSNGMYSLRKISIKSKRIADTVEALIGAYLSAAGEQAAFLFINSLGMDI 1122



 Score = 24.6 bits (52), Expect(3) = 6e-41
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 919  ELSELCDQKGYIKDIVSRENGGI 987
            EL E CD++ Y +       GG+
Sbjct: 1321 ELQEFCDRRSYSRSYTKTHEGGV 1343


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