BLASTX nr result
ID: Atropa21_contig00016039
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00016039
(896 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like prote... 208 2e-51
ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like prote... 208 2e-51
ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like prote... 200 7e-49
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote... 199 9e-49
ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like prote... 199 1e-48
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275... 199 2e-48
gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus... 198 3e-48
gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus pe... 197 6e-48
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin... 197 6e-48
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|5... 196 1e-47
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri... 194 3e-47
ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like prote... 194 5e-47
ref|XP_006407130.1| hypothetical protein EUTSA_v10021763mg [Eutr... 193 8e-47
ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabi... 193 8e-47
ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arab... 192 2e-46
ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like prote... 191 2e-46
ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Me... 191 4e-46
ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citr... 190 7e-46
gb|EOY27290.1| Small nuclear ribonucleoprotein family protein is... 188 2e-45
ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like prote... 188 2e-45
>ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
tuberosum]
Length = 128
Score = 208 bits (530), Expect = 2e-51
Identities = 107/128 (83%), Positives = 109/128 (85%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWA EDIYLSTSLASY TLRSFDQFANAVLEGACERVIVGEI
Sbjct: 1 MSWASSEDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEI 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLYIIRGENVVLIGELDV+KEELPPHMTRVPEAEIRRAQKAEREA+DLKGTMRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLDMD
Sbjct: 121 RMEFLDMD 128
>ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
lycopersicum]
Length = 128
Score = 208 bits (530), Expect = 2e-51
Identities = 107/128 (83%), Positives = 109/128 (85%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWA EDIYLSTSLASY TLRSFDQFANAVLEGACERVIVGEI
Sbjct: 1 MSWASPEDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEI 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLYIIRGENVVLIGELDV+KEELPPHMTRVPEAEIRRAQKAEREA+DLKGTMRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLDMD
Sbjct: 121 RMEFLDMD 128
>ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform X1
[Cicer arietinum]
Length = 128
Score = 200 bits (508), Expect = 7e-49
Identities = 100/128 (78%), Positives = 107/128 (83%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG EDIYLSTSLASY TLRSFDQFANAVLEGACERV+VG++
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVVVGDL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLY+IRGENVVLIGELD+E+EELPPHMTRVP EI RAQKAER+ASDLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDMEREELPPHMTRVPTEEILRAQKAERDASDLKGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLDMD
Sbjct: 121 RMEFLDMD 128
>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera] gi|147803430|emb|CAN62239.1| hypothetical
protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product
[Vitis vinifera]
Length = 128
Score = 199 bits (507), Expect = 9e-49
Identities = 101/128 (78%), Positives = 107/128 (83%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG EDIYLSTSLASY LRSFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLY+IRGENVVLIGELD+EKEELPPHMTRV AEI+RAQKAEREASDLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
vesca subsp. vesca]
Length = 128
Score = 199 bits (506), Expect = 1e-48
Identities = 100/128 (78%), Positives = 106/128 (82%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG ED+YLSTSLASY LRSFDQFANAVLEGACERVIVGE+
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKILVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCD+PLGLY+IRGENVVLIGELD E+EELPPHMTRV AEI+RAQKAEREASDLKGTMRK
Sbjct: 61 YCDLPLGLYVIRGENVVLIGELDAEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLDMD
Sbjct: 121 RMEFLDMD 128
>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 199 bits (505), Expect = 2e-48
Identities = 101/128 (78%), Positives = 107/128 (83%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG EDIYLSTSLASY LRSFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLYIIRGENVVLIGELD+EKEELPPHMTRV AEIRRAQKAER+A+DLKGTMRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
Length = 128
Score = 198 bits (503), Expect = 3e-48
Identities = 101/128 (78%), Positives = 106/128 (82%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG EDIYLSTSLASY TLRSFDQFANAVLEGACERVIVGE+
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLY+IRGENVVLIGELD+E+EELP HMTRV AEI+RAQKAEREASDLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus persica]
Length = 128
Score = 197 bits (500), Expect = 6e-48
Identities = 100/128 (78%), Positives = 105/128 (82%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG ED+YLSTSLASY LRSFDQFANAVLEGACERVIVGE+
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLY+IRGENVVLIGELD E+EELPPHMTRV AEI+ AQKAEREASDLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDSEREELPPHMTRVSAAEIKSAQKAEREASDLKGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLDMD
Sbjct: 121 RMEFLDMD 128
>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
gi|561008464|gb|ESW07413.1| hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris]
Length = 128
Score = 197 bits (500), Expect = 6e-48
Identities = 100/128 (78%), Positives = 106/128 (82%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG EDIYLSTSLASY TLRSFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLY+IRGENVVLIGELD+E+EELP HMTRV AEI+RAQKAEREASDLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_002331181.1| predicted protein [Populus trichocarpa]
gi|566149434|ref|XP_006369123.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa
x Populus deltoides] gi|550347483|gb|ERP65692.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 196 bits (498), Expect = 1e-47
Identities = 99/128 (77%), Positives = 107/128 (83%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG EDIYLSTSLA+Y LRSFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDI LGLY+IRGENVVLIGELD+E+EELPPHMTRV EAEIRRAQKAEREA+DLKGTMRK
Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|222841552|gb|EEE79099.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 194 bits (494), Expect = 3e-47
Identities = 98/128 (76%), Positives = 106/128 (82%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG EDIYLSTSLASY LRSFDQFANAVLEGACER IVG++
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDI LGLY+IRGENVVLIGELD+E+EELPPHMTRV EAEI+RAQKAEREA+DLKGTMRK
Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
vinifera] gi|297738539|emb|CBI27784.3| unnamed protein
product [Vitis vinifera]
Length = 128
Score = 194 bits (492), Expect = 5e-47
Identities = 96/128 (75%), Positives = 105/128 (82%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG ED+ STSLASY LRSFDQFANAVLEGACER IVG+I
Sbjct: 1 MSWAGPEDLLFSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDI 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLY+IRGENVVL+GELD++KEELPPHMTRVPEAEI+RAQKAEREA+DLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLLGELDLDKEELPPHMTRVPEAEIKRAQKAEREATDLKGSMRK 120
Query: 495 RMEFLDMD 518
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_006407130.1| hypothetical protein EUTSA_v10021763mg [Eutrema salsugineum]
gi|557108276|gb|ESQ48583.1| hypothetical protein
EUTSA_v10021763mg [Eutrema salsugineum]
Length = 128
Score = 193 bits (490), Expect = 8e-47
Identities = 98/128 (76%), Positives = 103/128 (80%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG EDIYLSTSLASY TLRSFDQFANAVLEGACERVIVGE
Sbjct: 1 MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLY+IRGENVVLIGELD E+EELPPHM RV E EI+RAQK EREAS+L+GTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDTEREELPPHMIRVSETEIKRAQKVEREASELRGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|30682974|ref|NP_850580.1| U6 snRNA-associated Sm-like
protein LSm1 [Arabidopsis thaliana]
gi|21536995|gb|AAM61336.1| Sm protein, putative
[Arabidopsis thaliana] gi|27754337|gb|AAO22620.1|
putative Sm protein [Arabidopsis thaliana]
gi|28393853|gb|AAO42334.1| putative Sm protein
[Arabidopsis thaliana] gi|332641944|gb|AEE75465.1| U6
snRNA-associated Sm-like protein LSm1 [Arabidopsis
thaliana] gi|332641945|gb|AEE75466.1| U6
snRNA-associated Sm-like protein LSm1 [Arabidopsis
thaliana]
Length = 128
Score = 193 bits (490), Expect = 8e-47
Identities = 98/128 (76%), Positives = 104/128 (81%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG E+IYLSTSLASY TLRSFDQFANAVLEGACERVIVGE
Sbjct: 1 MSWAGPEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLY+IRGENVVLIGELD E+EELPPHM RV EAEI+RAQK EREAS+L+GTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDTEREELPPHMIRVSEAEIKRAQKVEREASELRGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata] gi|565482348|ref|XP_006298814.1| hypothetical
protein CARUB_v10014920mg [Capsella rubella]
gi|297328707|gb|EFH59126.1| hypothetical protein
ARALYDRAFT_478821 [Arabidopsis lyrata subsp. lyrata]
gi|482567523|gb|EOA31712.1| hypothetical protein
CARUB_v10014920mg [Capsella rubella]
Length = 128
Score = 192 bits (487), Expect = 2e-46
Identities = 98/128 (76%), Positives = 104/128 (81%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG EDIYLSTSLASY TLRSFDQFANAVLEGACERVIVGE
Sbjct: 1 MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLY+IRGENVVLIGELD E+EELPP+M RV EAEI+RAQK EREAS+L+GTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDTEREELPPNMIRVSEAEIKRAQKVEREASELRGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLD D
Sbjct: 121 RMEFLDFD 128
>ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
lycopersicum] gi|565351988|ref|XP_006342929.1|
PREDICTED: probable U6 snRNA-associated Sm-like protein
LSm1-like [Solanum tuberosum]
Length = 128
Score = 191 bits (486), Expect = 2e-46
Identities = 97/128 (75%), Positives = 104/128 (81%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWA EDIY STSLASY LRSFDQFANAVLE ACER IVG++
Sbjct: 1 MSWASPEDIYTSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLESACERAIVGDL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLYIIRGENVVLIGELDV+KEELPPHMTRV EAEIRRAQKAER+++DLKG+MRK
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVSEAEIRRAQKAERDSTDLKGSMRK 120
Query: 495 RMEFLDMD 518
RMEFLDMD
Sbjct: 121 RMEFLDMD 128
>ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like
protein LSm1 [Medicago truncatula]
Length = 131
Score = 191 bits (484), Expect = 4e-46
Identities = 97/131 (74%), Positives = 106/131 (80%), Gaps = 3/131 (2%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWA ED+YLSTSLASY TLRSFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWAAPEDLYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIR---RAQKAEREASDLKGT 485
YCDIPLGLY+IRGENVVLIGE+DVE+EELPPHMTRVP EIR RAQK ER+AS+LKGT
Sbjct: 61 YCDIPLGLYVIRGENVVLIGEMDVEREELPPHMTRVPTEEIRRGIRAQKVERDASELKGT 120
Query: 486 MRKRMEFLDMD 518
MRKRMEFLD+D
Sbjct: 121 MRKRMEFLDLD 131
>ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citrus clementina]
gi|568822947|ref|XP_006465886.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm1-like [Citrus
sinensis] gi|557528691|gb|ESR39941.1| hypothetical
protein CICLE_v10026767mg [Citrus clementina]
Length = 128
Score = 190 bits (482), Expect = 7e-46
Identities = 94/128 (73%), Positives = 106/128 (82%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG +D+YLSTSLASY TL SFDQFANAVLEGACERVIVG++
Sbjct: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLY+IRGENVVLIGELD+E++ELPPH+T V AEI+RAQKAEREASDLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRAQKAEREASDLKGSMRK 120
Query: 495 RMEFLDMD 518
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>gb|EOY27290.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 128
Score = 188 bits (478), Expect = 2e-45
Identities = 96/128 (75%), Positives = 104/128 (81%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
M + G EDIYLSTSLASY TLRSFDQFANAVLEGAC+RVIVG++
Sbjct: 1 MPYLGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACDRVIVGDL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLY+IRGENVVLIGELD+E+EELPPHMT V AEIRRAQKAEREA DLKGTMRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTCVSAAEIRRAQKAEREARDLKGTMRK 120
Query: 495 RMEFLDMD 518
RMEFLD+D
Sbjct: 121 RMEFLDLD 128
>ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
vesca subsp. vesca]
Length = 128
Score = 188 bits (478), Expect = 2e-45
Identities = 95/128 (74%), Positives = 103/128 (80%)
Frame = +3
Query: 135 MSWAGVEDIYLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACERVIVGEI 314
MSWAG ED LSTSLASY LRSFDQFAN VLEGACERVIVG++
Sbjct: 1 MSWAGPEDSLLSTSLASYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL 60
Query: 315 YCDIPLGLYIIRGENVVLIGELDVEKEELPPHMTRVPEAEIRRAQKAEREASDLKGTMRK 494
YCDIPLGLY+IRGENVVLIGEL++ KEELPPHMT VPEAEI+RAQKAER+ASDLKG+MRK
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELELNKEELPPHMTLVPEAEIKRAQKAERDASDLKGSMRK 120
Query: 495 RMEFLDMD 518
RMEFLD D
Sbjct: 121 RMEFLDFD 128