BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00016038
         (456 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like prote...    83   3e-14
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|5...    80   2e-13
ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like prote...    80   4e-13
ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like prote...    80   4e-13
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275...    80   4e-13
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri...    79   5e-13
ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like prote...    78   1e-12
gb|EXC32300.1| Nucleoside diphosphate kinase 6 [Morus notabilis]       77   2e-12
ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like prote...    77   3e-12
gb|EMJ04688.1| hypothetical protein PRUPE_ppa022434mg, partial [...    77   3e-12
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...    75   7e-12
ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like prote...    75   9e-12
gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus pe...    74   2e-11
gb|AFK42388.1| unknown [Medicago truncatula]                           74   2e-11
ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Me...    74   2e-11
ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|2235447...    74   3e-11
ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citr...    73   3e-11
ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [A...    73   5e-11
gb|EOY27290.1| Small nuclear ribonucleoprotein family protein is...    73   5e-11
ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like prote...    73   5e-11

>ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
           lycopersicum] gi|565351988|ref|XP_006342929.1|
           PREDICTED: probable U6 snRNA-associated Sm-like protein
           LSm1-like [Solanum tuberosum]
          Length = 128

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMTRVSEAEIRRAQKAERD+TDLKGSMRKRMEFLDMD
Sbjct: 88  ELPPHMTRVSEAEIRRAQKAERDSTDLKGSMRKRMEFLDMD 128


>ref|XP_002331181.1| predicted protein [Populus trichocarpa]
           gi|566149434|ref|XP_006369123.1| small nuclear
           ribonucleoprotein [Populus trichocarpa]
           gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|550347483|gb|ERP65692.1| small
           nuclear ribonucleoprotein [Populus trichocarpa]
          Length = 128

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 38/41 (92%), Positives = 41/41 (100%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMTRVSEAEIRRAQKAER+ATDLKG+MRKRMEFLD+D
Sbjct: 88  ELPPHMTRVSEAEIRRAQKAEREATDLKGTMRKRMEFLDLD 128


>ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
           tuberosum]
          Length = 128

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMTRV EAEIRRAQKAER+ATDLKG+MRKRMEFLDMD
Sbjct: 88  ELPPHMTRVPEAEIRRAQKAEREATDLKGTMRKRMEFLDMD 128


>ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
           lycopersicum]
          Length = 128

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMTRV EAEIRRAQKAER+ATDLKG+MRKRMEFLDMD
Sbjct: 88  ELPPHMTRVPEAEIRRAQKAEREATDLKGTMRKRMEFLDMD 128


>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMTRVS AEIRRAQKAERDATDLKG+MRKRMEFLD+D
Sbjct: 88  ELPPHMTRVSAAEIRRAQKAERDATDLKGTMRKRMEFLDLD 128


>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
           gi|222841552|gb|EEE79099.1| small nuclear
           ribonucleoprotein [Populus trichocarpa]
          Length = 128

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 37/41 (90%), Positives = 41/41 (100%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMTRVSEAEI+RAQKAER+ATDLKG+MRKRMEFLD+D
Sbjct: 88  ELPPHMTRVSEAEIKRAQKAEREATDLKGTMRKRMEFLDLD 128


>ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
           vinifera] gi|297738539|emb|CBI27784.3| unnamed protein
           product [Vitis vinifera]
          Length = 128

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMTRV EAEI+RAQKAER+ATDLKGSMRKRMEFLD D
Sbjct: 88  ELPPHMTRVPEAEIKRAQKAEREATDLKGSMRKRMEFLDFD 128


>gb|EXC32300.1| Nucleoside diphosphate kinase 6 [Morus notabilis]
          Length = 468

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMTRVS AEI+RAQKAER+ATDLKG+MRKRMEFLD+D
Sbjct: 428 ELPPHMTRVSAAEIKRAQKAEREATDLKGTMRKRMEFLDLD 468


>ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
           vesca subsp. vesca]
          Length = 128

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMTRVS AEI+RAQKAER+A+DLKG+MRKRMEFLDMD
Sbjct: 88  ELPPHMTRVSPAEIKRAQKAEREASDLKGTMRKRMEFLDMD 128


>gb|EMJ04688.1| hypothetical protein PRUPE_ppa022434mg, partial [Prunus persica]
          Length = 160

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMT V EAEI+RAQKAERDATDLKGSMRKRMEFLD D
Sbjct: 120 ELPPHMTLVPEAEIKRAQKAERDATDLKGSMRKRMEFLDFD 160


>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 35/41 (85%), Positives = 40/41 (97%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMTRVS AEI+RAQKAER+A+DLKG+MRKRMEFLD+D
Sbjct: 88  ELPPHMTRVSAAEIKRAQKAEREASDLKGTMRKRMEFLDLD 128


>ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
           vesca subsp. vesca]
          Length = 128

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMT V EAEI+RAQKAERDA+DLKGSMRKRMEFLD D
Sbjct: 88  ELPPHMTLVPEAEIKRAQKAERDASDLKGSMRKRMEFLDFD 128


>gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus persica]
          Length = 128

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 35/41 (85%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMTRVS AEI+ AQKAER+A+DLKG+MRKRMEFLDMD
Sbjct: 88  ELPPHMTRVSAAEIKSAQKAEREASDLKGTMRKRMEFLDMD 128


>gb|AFK42388.1| unknown [Medicago truncatula]
          Length = 128

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 35/41 (85%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMT VSEA+IR+AQKAERDA+DLKG+MRKRMEFLD D
Sbjct: 88  ELPPHMTCVSEADIRKAQKAERDASDLKGTMRKRMEFLDFD 128


>ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
           gi|355484387|gb|AES65590.1| U6 snRNA-associated Sm-like
           protein LSm1 [Medicago truncatula]
          Length = 128

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 35/41 (85%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMT VSEA+IR+AQKAERDA+DLKG+MRKRMEFLD D
Sbjct: 88  ELPPHMTCVSEADIRKAQKAERDASDLKGTMRKRMEFLDFD 128


>ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|223544736|gb|EEF46252.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELP HMT VSEAEI+RAQKAER+ATDLKGSMRKRMEFLD D
Sbjct: 88  ELPSHMTCVSEAEIKRAQKAEREATDLKGSMRKRMEFLDFD 128


>ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citrus clementina]
           gi|568822947|ref|XP_006465886.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm1-like [Citrus
           sinensis] gi|557528691|gb|ESR39941.1| hypothetical
           protein CICLE_v10026767mg [Citrus clementina]
          Length = 128

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPH+T VS AEI+RAQKAER+A+DLKGSMRKRMEFLD+D
Sbjct: 88  ELPPHLTHVSVAEIKRAQKAEREASDLKGSMRKRMEFLDLD 128


>ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [Amborella trichopoda]
           gi|548839141|gb|ERM99455.1| hypothetical protein
           AMTR_s00131p00107350 [Amborella trichopoda]
          Length = 128

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELP HMTRVS  EI+RAQKAERDA DLKGSMRKRMEFLD+D
Sbjct: 88  ELPAHMTRVSAVEIKRAQKAERDAKDLKGSMRKRMEFLDLD 128


>gb|EOY27290.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
           cacao]
          Length = 128

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMT VS AEIRRAQKAER+A DLKG+MRKRMEFLD+D
Sbjct: 88  ELPPHMTCVSAAEIRRAQKAEREARDLKGTMRKRMEFLDLD 128


>ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform X1
           [Cicer arietinum]
          Length = 128

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +3

Query: 3   ELPPHMTRVSEAEIRRAQKAERDATDLKGSMRKRMEFLDMD 125
           ELPPHMTRV   EI RAQKAERDA+DLKG+MRKRMEFLDMD
Sbjct: 88  ELPPHMTRVPTEEILRAQKAERDASDLKGTMRKRMEFLDMD 128