BLASTX nr result
ID: Atropa21_contig00016030
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00016030
(590 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI25619.3| unnamed protein product [Vitis vinifera] 109 5e-22
emb|CBI25617.3| unnamed protein product [Vitis vinifera] 106 4e-21
ref|XP_006338352.1| PREDICTED: 60S ribosomal protein L39-3-like ... 104 2e-20
ref|XP_006372129.1| hypothetical protein POPTR_0018s12030g [Popu... 103 4e-20
ref|XP_004251767.1| PREDICTED: 60S ribosomal protein L39-3-like ... 103 4e-20
gb|EOY29623.1| Ribosomal protein L39 family protein [Theobroma c... 102 6e-20
ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus co... 102 6e-20
ref|XP_004964674.1| PREDICTED: 60S ribosomal protein L39-like [S... 102 8e-20
ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatu... 101 2e-19
emb|CBI21094.3| unnamed protein product [Vitis vinifera] 101 2e-19
pdb|3J61|LL Chain l, Localization Of The Large Subunit Ribosomal... 100 2e-19
ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group] g... 100 2e-19
ref|XP_006450329.1| hypothetical protein CICLE_v10010138mg [Citr... 100 2e-19
dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa... 100 3e-19
ref|NP_001048394.1| Os02g0797200 [Oryza sativa Japonica Group] g... 100 3e-19
gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays] 100 3e-19
gb|AEY84990.1| 60S ribosomal protein L39 [Wolffia australiana] 100 4e-19
ref|XP_006450330.1| hypothetical protein CICLE_v10010138mg [Citr... 100 5e-19
gb|AEC10956.1| ribosomal protein L39e [Camellia sinensis] 100 5e-19
ref|XP_006295354.1| hypothetical protein CARUB_v10024445mg, part... 99 6e-19
>emb|CBI25619.3| unnamed protein product [Vitis vinifera]
Length = 72
Score = 109 bits (273), Expect = 5e-22
Identities = 52/68 (76%), Positives = 55/68 (80%)
Frame = -3
Query: 528 MKMLLLISSSHLHRNNSRIVKMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNA 349
MK L + L R +I KMPSHKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIRYNA
Sbjct: 1 MKKLFSFPNFFLRRRARKISKMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNA 60
Query: 348 KRRHWRRT 325
KRRHWRRT
Sbjct: 61 KRRHWRRT 68
>emb|CBI25617.3| unnamed protein product [Vitis vinifera]
Length = 70
Score = 106 bits (265), Expect = 4e-21
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = -3
Query: 522 MLLLISSSHLHRNNSRIVKMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKR 343
M ++ + R +I KMPSHKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKR
Sbjct: 1 MNFVVGGRLMRRRARKISKMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKR 60
Query: 342 RHWRRT 325
RHWRRT
Sbjct: 61 RHWRRT 66
>ref|XP_006338352.1| PREDICTED: 60S ribosomal protein L39-3-like [Solanum tuberosum]
Length = 51
Score = 104 bits (260), Expect = 2e-20
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = -3
Query: 465 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT
Sbjct: 1 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 47
>ref|XP_006372129.1| hypothetical protein POPTR_0018s12030g [Populus trichocarpa]
gi|550318562|gb|ERP49926.1| hypothetical protein
POPTR_0018s12030g [Populus trichocarpa]
Length = 104
Score = 103 bits (256), Expect = 4e-20
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -3
Query: 525 KMLLLISSSHLHRNNSRIVKMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAK 346
++ + I L ++ R KMPSHKTF IKKKLAKK RQNRPIP+WIRMRTDNTIRYNAK
Sbjct: 34 RVSIAIGCFSLQPSSPRPAKMPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAK 93
Query: 345 RRHWRRT 325
RRHWRRT
Sbjct: 94 RRHWRRT 100
>ref|XP_004251767.1| PREDICTED: 60S ribosomal protein L39-3-like [Solanum lycopersicum]
gi|565353539|ref|XP_006343687.1| PREDICTED: 60S
ribosomal protein L39-3-like [Solanum tuberosum]
gi|565366803|ref|XP_006350074.1| PREDICTED: 60S
ribosomal protein L39-3-like [Solanum tuberosum]
Length = 51
Score = 103 bits (256), Expect = 4e-20
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = -3
Query: 465 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
MPSHK+FMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT
Sbjct: 1 MPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 47
>gb|EOY29623.1| Ribosomal protein L39 family protein [Theobroma cacao]
Length = 51
Score = 102 bits (255), Expect = 6e-20
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = -3
Query: 465 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
MPSHKTFMIKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRT
Sbjct: 1 MPSHKTFMIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 47
>ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus communis]
gi|223537230|gb|EEF38862.1| ribosomal protein L39e,
putative [Ricinus communis]
Length = 67
Score = 102 bits (255), Expect = 6e-20
Identities = 45/51 (88%), Positives = 49/51 (96%)
Frame = -3
Query: 477 RIVKMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
++ KMPSHKTF+IKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRT
Sbjct: 13 QVAKMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRT 63
>ref|XP_004964674.1| PREDICTED: 60S ribosomal protein L39-like [Setaria italica]
Length = 51
Score = 102 bits (254), Expect = 8e-20
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = -3
Query: 465 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
MPSHKTF IKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT
Sbjct: 1 MPSHKTFRIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 47
>ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatula]
gi|355492369|gb|AES73572.1| 60S ribosomal protein L39
[Medicago truncatula] gi|388513831|gb|AFK44977.1|
unknown [Medicago truncatula]
gi|388516927|gb|AFK46525.1| unknown [Medicago
truncatula]
Length = 51
Score = 101 bits (251), Expect = 2e-19
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = -3
Query: 465 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
MPSHKTF+IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRT
Sbjct: 1 MPSHKTFVIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 47
>emb|CBI21094.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 101 bits (251), Expect = 2e-19
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = -3
Query: 468 KMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
KMPSHKTF+IKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRT
Sbjct: 61 KMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRT 108
>pdb|3J61|LL Chain l, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome gi|57471714|gb|AAW50988.1| ribosomal protein
L39 [Triticum aestivum] gi|326487816|dbj|BAK05580.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|326492163|dbj|BAJ98306.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326511663|dbj|BAJ91976.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|475538449|gb|EMT09251.1| 60S ribosomal protein L39
[Aegilops tauschii]
Length = 51
Score = 100 bits (250), Expect = 2e-19
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = -3
Query: 465 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
MPSHKTF IK+KLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT
Sbjct: 1 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 47
>ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group]
gi|514794821|ref|XP_004973152.1| PREDICTED: 60S
ribosomal protein L39-3-like isoform X2 [Setaria
italica] gi|75251551|sp|Q5SMI4.1|RL393_ORYSJ RecName:
Full=60S ribosomal protein L39-3
gi|55771364|dbj|BAD72315.1| 60S ribosomal protein L39
[Oryza sativa Japonica Group]
gi|55773789|dbj|BAD72572.1| 60S ribosomal protein L39
[Oryza sativa Japonica Group]
gi|125554313|gb|EAY99918.1| hypothetical protein
OsI_21918 [Oryza sativa Indica Group]
gi|125596264|gb|EAZ36044.1| hypothetical protein
OsJ_20351 [Oryza sativa Japonica Group]
gi|255676783|dbj|BAH93365.1| Os06g0181566 [Oryza sativa
Japonica Group]
Length = 51
Score = 100 bits (250), Expect = 2e-19
Identities = 45/47 (95%), Positives = 45/47 (95%)
Frame = -3
Query: 465 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
MPSHKTF IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRT
Sbjct: 1 MPSHKTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 47
>ref|XP_006450329.1| hypothetical protein CICLE_v10010138mg [Citrus clementina]
gi|568840009|ref|XP_006473965.1| PREDICTED: 60S
ribosomal protein L39-3-like [Citrus sinensis]
gi|568859839|ref|XP_006483440.1| PREDICTED: 60S
ribosomal protein L39-3-like [Citrus sinensis]
gi|209967447|gb|ACJ02352.1| 60S ribosomal protein L39
[Vernicia fordii] gi|257219568|gb|ACV50437.1| 60S
ribosomal protein L39 [Jatropha curcas]
gi|557553555|gb|ESR63569.1| hypothetical protein
CICLE_v10010138mg [Citrus clementina]
Length = 51
Score = 100 bits (250), Expect = 2e-19
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = -3
Query: 465 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
MPSHKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRT
Sbjct: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRT 47
>dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa Japonica Group]
Length = 118
Score = 100 bits (249), Expect = 3e-19
Identities = 45/47 (95%), Positives = 45/47 (95%)
Frame = -3
Query: 465 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
MPSHKTF IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRT
Sbjct: 68 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 114
>ref|NP_001048394.1| Os02g0797200 [Oryza sativa Japonica Group]
gi|162459376|ref|NP_001105473.1| 60S ribosomal protein
L39 [Zea mays] gi|242063386|ref|XP_002452982.1|
hypothetical protein SORBIDRAFT_04g036030 [Sorghum
bicolor] gi|242094938|ref|XP_002437959.1| hypothetical
protein SORBIDRAFT_10g005510 [Sorghum bicolor]
gi|356507420|ref|XP_003522465.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|356515092|ref|XP_003526235.1| PREDICTED: 60S
ribosomal protein L39-2-like isoform X1 [Glycine max]
gi|356515112|ref|XP_003526245.1| PREDICTED: 60S
ribosomal protein L39-2 isoform 1 [Glycine max]
gi|356530615|ref|XP_003533876.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|356556588|ref|XP_003546606.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|502125052|ref|XP_004498777.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|502132450|ref|XP_004501366.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|502172688|ref|XP_004515175.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|514719418|ref|XP_004954230.1| PREDICTED: 60S
ribosomal protein L39-like [Setaria italica]
gi|1710551|sp|P51425.1|RL39_MAIZE RecName: Full=60S
ribosomal protein L39
gi|55977802|sp|P51426.2|RL392_ORYSJ RecName: Full=60S
ribosomal protein L39-2
gi|306756293|sp|Q6KAJ8.2|RL391_ORYSJ RecName: Full=60S
ribosomal protein L39-1 gi|1177369|emb|CAA64728.1|
ribosomal protein L39 [Zea mays]
gi|47497037|dbj|BAD19090.1| 60S RIBOSOMAL PROTEIN L39
[Oryza sativa Japonica Group]
gi|113537925|dbj|BAF10308.1| Os02g0797200 [Oryza sativa
Japonica Group] gi|125541470|gb|EAY87865.1| hypothetical
protein OsI_09286 [Oryza sativa Indica Group]
gi|125541472|gb|EAY87867.1| hypothetical protein
OsI_09288 [Oryza sativa Indica Group]
gi|125584013|gb|EAZ24944.1| hypothetical protein
OsJ_08725 [Oryza sativa Japonica Group]
gi|125584015|gb|EAZ24946.1| hypothetical protein
OsJ_08727 [Oryza sativa Japonica Group]
gi|149390885|gb|ABR25460.1| 60S ribosomal protein l39
[Oryza sativa Indica Group] gi|195609506|gb|ACG26583.1|
60S ribosomal protein L39 [Zea mays]
gi|195609702|gb|ACG26681.1| 60S ribosomal protein L39
[Zea mays] gi|195609876|gb|ACG26768.1| 60S ribosomal
protein L39 [Zea mays] gi|195609896|gb|ACG26778.1| 60S
ribosomal protein L39 [Zea mays]
gi|195609966|gb|ACG26813.1| 60S ribosomal protein L39
[Zea mays] gi|195610006|gb|ACG26833.1| 60S ribosomal
protein L39 [Zea mays] gi|195610038|gb|ACG26849.1| 60S
ribosomal protein L39 [Zea mays]
gi|195611058|gb|ACG27359.1| 60S ribosomal protein L39
[Zea mays] gi|195612224|gb|ACG27942.1| 60S ribosomal
protein L39 [Zea mays] gi|195641468|gb|ACG40202.1| 60S
ribosomal protein L39 [Zea mays]
gi|195643810|gb|ACG41373.1| 60S ribosomal protein L39
[Zea mays] gi|195659485|gb|ACG49210.1| 60S ribosomal
protein L39 [Zea mays] gi|215767950|dbj|BAH00179.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|215769187|dbj|BAH01416.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|238011942|gb|ACR37006.1| unknown [Zea mays]
gi|238012804|gb|ACR37437.1| unknown [Zea mays]
gi|241916182|gb|EER89326.1| hypothetical protein
SORBIDRAFT_10g005510 [Sorghum bicolor]
gi|241932813|gb|EES05958.1| hypothetical protein
SORBIDRAFT_04g036030 [Sorghum bicolor]
gi|413939321|gb|AFW73872.1| 60S ribosomal protein L39
[Zea mays] gi|552562415|gb|AFW64137.2| 60S ribosomal
protein L39 [Zea mays] gi|561010059|gb|ESW08966.1|
hypothetical protein PHAVU_009G089400g [Phaseolus
vulgaris] gi|561011513|gb|ESW10420.1| hypothetical
protein PHAVU_009G207900g [Phaseolus vulgaris]
gi|561028279|gb|ESW26919.1| hypothetical protein
PHAVU_003G159100g [Phaseolus vulgaris]
Length = 51
Score = 100 bits (249), Expect = 3e-19
Identities = 45/47 (95%), Positives = 45/47 (95%)
Frame = -3
Query: 465 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
MPSHKTF IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRT
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 47
>gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays]
Length = 99
Score = 100 bits (249), Expect = 3e-19
Identities = 45/47 (95%), Positives = 45/47 (95%)
Frame = -3
Query: 465 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
MPSHKTF IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRT
Sbjct: 49 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 95
>gb|AEY84990.1| 60S ribosomal protein L39 [Wolffia australiana]
Length = 51
Score = 100 bits (248), Expect = 4e-19
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = -3
Query: 465 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
MPSHK+F+IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRT
Sbjct: 1 MPSHKSFLIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 47
>ref|XP_006450330.1| hypothetical protein CICLE_v10010138mg [Citrus clementina]
gi|557553556|gb|ESR63570.1| hypothetical protein
CICLE_v10010138mg [Citrus clementina]
Length = 53
Score = 99.8 bits (247), Expect = 5e-19
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = -3
Query: 471 VKMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
++ PSHKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRT
Sbjct: 1 MEQPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRT 49
>gb|AEC10956.1| ribosomal protein L39e [Camellia sinensis]
Length = 51
Score = 99.8 bits (247), Expect = 5e-19
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = -3
Query: 465 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
MPSHKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRT
Sbjct: 1 MPSHKTFMIKKKLAKKIRQNRPIPHWIRMRTDNTIRYNAKRRHWRRT 47
>ref|XP_006295354.1| hypothetical protein CARUB_v10024445mg, partial [Capsella rubella]
gi|482564062|gb|EOA28252.1| hypothetical protein
CARUB_v10024445mg, partial [Capsella rubella]
Length = 77
Score = 99.4 bits (246), Expect = 6e-19
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = -3
Query: 480 SRIVKMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRT 325
S+ KMPSHK+FMIKKKL KK RQNRPIP+WIR+RTDNTIRYNAKRRHWRRT
Sbjct: 22 SQSFKMPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRT 73