BLASTX nr result
ID: Atropa21_contig00015998
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00015998
(491 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355878.1| PREDICTED: mediator of RNA polymerase II tra... 118 7e-25
ref|XP_006355848.1| PREDICTED: mediator of RNA polymerase II tra... 113 3e-23
ref|XP_004247142.1| PREDICTED: mediator of RNA polymerase II tra... 112 5e-23
ref|XP_004240641.1| PREDICTED: mediator of RNA polymerase II tra... 111 9e-23
ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II tra... 104 1e-20
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216... 104 1e-20
gb|EOY05511.1| REF4-related 1 [Theobroma cacao] 103 2e-20
ref|XP_006419799.1| hypothetical protein CICLE_v10006738mg [Citr... 102 4e-20
gb|EMJ26654.1| hypothetical protein PRUPE_ppa000298mg [Prunus pe... 102 4e-20
gb|EXB95840.1| hypothetical protein L484_010039 [Morus notabilis] 101 9e-20
ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247... 101 9e-20
ref|XP_002311827.1| hypothetical protein POPTR_0008s20610g [Popu... 100 2e-19
ref|XP_003547235.2| PREDICTED: mediator of RNA polymerase II tra... 99 4e-19
ref|XP_006594439.1| PREDICTED: mediator of RNA polymerase II tra... 99 4e-19
ref|XP_006594438.1| PREDICTED: mediator of RNA polymerase II tra... 99 4e-19
ref|XP_004298175.1| PREDICTED: mediator of RNA polymerase II tra... 99 4e-19
ref|XP_002516789.1| conserved hypothetical protein [Ricinus comm... 99 4e-19
gb|ESW19779.1| hypothetical protein PHAVU_006G154900g [Phaseolus... 97 3e-18
ref|XP_003594102.1| hypothetical protein MTR_2g021400 [Medicago ... 97 3e-18
gb|EXB39334.1| hypothetical protein L484_025029 [Morus notabilis] 96 6e-18
>ref|XP_006355878.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Solanum tuberosum]
Length = 1321
Score = 118 bits (296), Expect = 7e-25
Identities = 60/87 (68%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = -1
Query: 491 GALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWN-EEXXX 315
GAL GKISLGCNKATW++YVSG ISL+VGCTP+WLLEVDVE+LK LS GLKQW+ EE
Sbjct: 1235 GALHGKISLGCNKATWKSYVSGLISLIVGCTPNWLLEVDVEVLKSLSTGLKQWDEEELAL 1294
Query: 314 XXXXXXXXXXXXSTAEMIIEGGMNFVR 234
+TAEMIIEGGMNFVR
Sbjct: 1295 ALLNSSGIGAMGATAEMIIEGGMNFVR 1321
>ref|XP_006355848.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Solanum tuberosum]
Length = 1373
Score = 113 bits (282), Expect = 3e-23
Identities = 58/86 (67%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEEXXXXX 309
ALDGKISLGCNKATWRAYVSGFISL+VGCTPSWLLEVD+++LKRLS GLK+ +EE
Sbjct: 1288 ALDGKISLGCNKATWRAYVSGFISLIVGCTPSWLLEVDLQVLKRLSKGLKRCDEEVLALA 1347
Query: 308 XXXXXXXXXXST-AEMIIEGGMNFVR 234
T AEMIIEG +NF R
Sbjct: 1348 LLEASGVGAMGTAAEMIIEGSLNFAR 1373
>ref|XP_004247142.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Solanum lycopersicum]
Length = 1321
Score = 112 bits (280), Expect = 5e-23
Identities = 55/87 (63%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Frame = -1
Query: 491 GALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQW-NEEXXX 315
G L GKISLGCNK+TW++YVSG ISL+V CTP+WLLEVDVE+LK +SMGLKQW EE
Sbjct: 1235 GVLHGKISLGCNKSTWKSYVSGLISLIVRCTPNWLLEVDVEVLKSISMGLKQWGEEELAL 1294
Query: 314 XXXXXXXXXXXXSTAEMIIEGGMNFVR 234
+TAEMI+EGGMNFV+
Sbjct: 1295 SLLSSSGIGAMGATAEMIVEGGMNFVK 1321
>ref|XP_004240641.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Solanum lycopersicum]
Length = 1336
Score = 111 bits (278), Expect = 9e-23
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEEXXXXX 309
ALDGKISLGCNKATWRAYVSGF+SL+VGCTPSWLLEVD+++LKRLS GLK+ +EE
Sbjct: 1251 ALDGKISLGCNKATWRAYVSGFVSLIVGCTPSWLLEVDLQVLKRLSKGLKRCDEEVLALA 1310
Query: 308 XXXXXXXXXXST-AEMIIEGGMNFVR 234
T A+MIIEG +NF R
Sbjct: 1311 LLEASGVGAMGTAAQMIIEGSLNFAR 1336
>ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Cucumis sativus]
Length = 1311
Score = 104 bits (259), Expect = 1e-20
Identities = 46/55 (83%), Positives = 53/55 (96%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDGKISLGC+ ATWRAYV+GF+SLMVGCTPSW+L+VDVE+LKRLS GL+QWNEE
Sbjct: 1230 ALDGKISLGCDWATWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSSGLRQWNEE 1284
>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
Length = 2712
Score = 104 bits (259), Expect = 1e-20
Identities = 46/55 (83%), Positives = 53/55 (96%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDGKISLGC+ ATWRAYV+GF+SLMVGCTPSW+L+VDVE+LKRLS GL+QWNEE
Sbjct: 2631 ALDGKISLGCDWATWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSSGLRQWNEE 2685
>gb|EOY05511.1| REF4-related 1 [Theobroma cacao]
Length = 1325
Score = 103 bits (257), Expect = 2e-20
Identities = 45/55 (81%), Positives = 53/55 (96%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDGKISLGC+ ATWRAYVSGF+SLMVGCTP+W+LEVDV++L+RLS GL+QWNEE
Sbjct: 1244 ALDGKISLGCDGATWRAYVSGFVSLMVGCTPNWVLEVDVDVLRRLSKGLRQWNEE 1298
>ref|XP_006419799.1| hypothetical protein CICLE_v10006738mg [Citrus clementina]
gi|568872251|ref|XP_006489285.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 33A-like [Citrus
sinensis] gi|557521672|gb|ESR33039.1| hypothetical
protein CICLE_v10006738mg [Citrus clementina]
Length = 1331
Score = 102 bits (255), Expect = 4e-20
Identities = 46/55 (83%), Positives = 51/55 (92%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDGKISLGC+ ATW AYVSGF+SLMV CTP+W+LEVDVE+LKRLS GLKQWNEE
Sbjct: 1250 ALDGKISLGCDSATWHAYVSGFMSLMVSCTPTWVLEVDVEVLKRLSKGLKQWNEE 1304
>gb|EMJ26654.1| hypothetical protein PRUPE_ppa000298mg [Prunus persica]
Length = 1326
Score = 102 bits (255), Expect = 4e-20
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDGKISLGC+ ATWRAYVSGF++LMVGCTP W+LEVDV +LKRLS GL+QWNEE
Sbjct: 1245 ALDGKISLGCDSATWRAYVSGFVTLMVGCTPKWVLEVDVHVLKRLSNGLRQWNEE 1299
>gb|EXB95840.1| hypothetical protein L484_010039 [Morus notabilis]
Length = 1285
Score = 101 bits (252), Expect = 9e-20
Identities = 45/54 (83%), Positives = 51/54 (94%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNE 327
ALDGKISLGC+ A WRAYVSGF+SLMVGCTP+W+LEVDV++LKRLS GLKQWNE
Sbjct: 1207 ALDGKISLGCDDAMWRAYVSGFVSLMVGCTPNWVLEVDVDVLKRLSNGLKQWNE 1260
>ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247741 [Vitis vinifera]
gi|297736973|emb|CBI26174.3| unnamed protein product
[Vitis vinifera]
Length = 1305
Score = 101 bits (252), Expect = 9e-20
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDG ISLGC+ ATWRAYVSGF+SLMVGCTP+W+LEVDV +LKRLS GL+QWNEE
Sbjct: 1224 ALDGNISLGCDCATWRAYVSGFVSLMVGCTPTWVLEVDVNVLKRLSKGLRQWNEE 1278
>ref|XP_002311827.1| hypothetical protein POPTR_0008s20610g [Populus trichocarpa]
gi|222851647|gb|EEE89194.1| hypothetical protein
POPTR_0008s20610g [Populus trichocarpa]
Length = 1304
Score = 100 bits (250), Expect = 2e-19
Identities = 44/55 (80%), Positives = 51/55 (92%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDGKISLGC+ TWRAYVSGF+SLMVGCTPSW+LEVD ++LKRLS GL+QWNE+
Sbjct: 1224 ALDGKISLGCDCTTWRAYVSGFVSLMVGCTPSWVLEVDADVLKRLSKGLRQWNEK 1278
>ref|XP_003547235.2| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Glycine max]
Length = 1316
Score = 99.4 bits (246), Expect = 4e-19
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDGKISLGC+ ATWRAYVSGF+SLMVGCTP+W+LEVDV +LKRLS GL+Q NEE
Sbjct: 1235 ALDGKISLGCDSATWRAYVSGFVSLMVGCTPNWVLEVDVHVLKRLSNGLRQLNEE 1289
>ref|XP_006594439.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Glycine max]
Length = 1195
Score = 99.4 bits (246), Expect = 4e-19
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDGKISLGC+ ATWRAYVSGF+SLMVGCTP+W+LEVDV +LKRLS GL+Q NEE
Sbjct: 1114 ALDGKISLGCDSATWRAYVSGFVSLMVGCTPNWVLEVDVHVLKRLSNGLRQLNEE 1168
>ref|XP_006594438.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Glycine max]
Length = 1322
Score = 99.4 bits (246), Expect = 4e-19
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDGKISLGC+ ATWRAYVSGF+SLMVGCTP+W+LEVDV +LKRLS GL+Q NEE
Sbjct: 1241 ALDGKISLGCDSATWRAYVSGFVSLMVGCTPNWVLEVDVHVLKRLSNGLRQLNEE 1295
>ref|XP_004298175.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Fragaria vesca subsp. vesca]
Length = 1322
Score = 99.4 bits (246), Expect = 4e-19
Identities = 44/55 (80%), Positives = 51/55 (92%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDGKISLGC+ ATWRAYVSGF +LMVGCT +W+LEVDVE+LKRLS GL++WNEE
Sbjct: 1241 ALDGKISLGCDSATWRAYVSGFATLMVGCTSNWMLEVDVEVLKRLSNGLRKWNEE 1295
>ref|XP_002516789.1| conserved hypothetical protein [Ricinus communis]
gi|223543877|gb|EEF45403.1| conserved hypothetical
protein [Ricinus communis]
Length = 1325
Score = 99.4 bits (246), Expect = 4e-19
Identities = 49/79 (62%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNE-EXXXX 312
ALDGKISLGC+ ATWR+YVSGF+SLMVGC PSW+LEVD ++LKRLS GL+QWNE E
Sbjct: 1245 ALDGKISLGCDWATWRSYVSGFVSLMVGCAPSWVLEVDADVLKRLSKGLRQWNEGELALA 1304
Query: 311 XXXXXXXXXXXSTAEMIIE 255
+ AE+IIE
Sbjct: 1305 LLGIGGVETMGAAAELIIE 1323
>gb|ESW19779.1| hypothetical protein PHAVU_006G154900g [Phaseolus vulgaris]
Length = 1332
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDGKISLGC+ ATWRAYVSGF+SLMV CTP+W+LEVDV +LKRLS GL+Q NEE
Sbjct: 1251 ALDGKISLGCDSATWRAYVSGFVSLMVDCTPNWVLEVDVHVLKRLSNGLRQLNEE 1305
>ref|XP_003594102.1| hypothetical protein MTR_2g021400 [Medicago truncatula]
gi|355483150|gb|AES64353.1| hypothetical protein
MTR_2g021400 [Medicago truncatula]
Length = 770
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDGKISLGC+ ATWRAYVSGF+SLMVGC P+W+LEVDV +LKRLS GL+Q NEE
Sbjct: 689 ALDGKISLGCDPATWRAYVSGFVSLMVGCIPNWVLEVDVNVLKRLSNGLRQLNEE 743
>gb|EXB39334.1| hypothetical protein L484_025029 [Morus notabilis]
Length = 1330
Score = 95.5 bits (236), Expect = 6e-18
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = -1
Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
ALDGKISLGC+ ATW AYVSG +SLMVGCT WL+E+DV++LKRLS GL+QWNEE
Sbjct: 1249 ALDGKISLGCDLATWWAYVSGVVSLMVGCTQKWLMEIDVDVLKRLSKGLRQWNEE 1303