BLASTX nr result

ID: Atropa21_contig00015998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00015998
         (491 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355878.1| PREDICTED: mediator of RNA polymerase II tra...   118   7e-25
ref|XP_006355848.1| PREDICTED: mediator of RNA polymerase II tra...   113   3e-23
ref|XP_004247142.1| PREDICTED: mediator of RNA polymerase II tra...   112   5e-23
ref|XP_004240641.1| PREDICTED: mediator of RNA polymerase II tra...   111   9e-23
ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II tra...   104   1e-20
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   104   1e-20
gb|EOY05511.1| REF4-related 1 [Theobroma cacao]                       103   2e-20
ref|XP_006419799.1| hypothetical protein CICLE_v10006738mg [Citr...   102   4e-20
gb|EMJ26654.1| hypothetical protein PRUPE_ppa000298mg [Prunus pe...   102   4e-20
gb|EXB95840.1| hypothetical protein L484_010039 [Morus notabilis]     101   9e-20
ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247...   101   9e-20
ref|XP_002311827.1| hypothetical protein POPTR_0008s20610g [Popu...   100   2e-19
ref|XP_003547235.2| PREDICTED: mediator of RNA polymerase II tra...    99   4e-19
ref|XP_006594439.1| PREDICTED: mediator of RNA polymerase II tra...    99   4e-19
ref|XP_006594438.1| PREDICTED: mediator of RNA polymerase II tra...    99   4e-19
ref|XP_004298175.1| PREDICTED: mediator of RNA polymerase II tra...    99   4e-19
ref|XP_002516789.1| conserved hypothetical protein [Ricinus comm...    99   4e-19
gb|ESW19779.1| hypothetical protein PHAVU_006G154900g [Phaseolus...    97   3e-18
ref|XP_003594102.1| hypothetical protein MTR_2g021400 [Medicago ...    97   3e-18
gb|EXB39334.1| hypothetical protein L484_025029 [Morus notabilis]      96   6e-18

>ref|XP_006355878.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like [Solanum tuberosum]
          Length = 1321

 Score =  118 bits (296), Expect = 7e-25
 Identities = 60/87 (68%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
 Frame = -1

Query: 491  GALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWN-EEXXX 315
            GAL GKISLGCNKATW++YVSG ISL+VGCTP+WLLEVDVE+LK LS GLKQW+ EE   
Sbjct: 1235 GALHGKISLGCNKATWKSYVSGLISLIVGCTPNWLLEVDVEVLKSLSTGLKQWDEEELAL 1294

Query: 314  XXXXXXXXXXXXSTAEMIIEGGMNFVR 234
                        +TAEMIIEGGMNFVR
Sbjct: 1295 ALLNSSGIGAMGATAEMIIEGGMNFVR 1321


>ref|XP_006355848.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like [Solanum tuberosum]
          Length = 1373

 Score =  113 bits (282), Expect = 3e-23
 Identities = 58/86 (67%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEEXXXXX 309
            ALDGKISLGCNKATWRAYVSGFISL+VGCTPSWLLEVD+++LKRLS GLK+ +EE     
Sbjct: 1288 ALDGKISLGCNKATWRAYVSGFISLIVGCTPSWLLEVDLQVLKRLSKGLKRCDEEVLALA 1347

Query: 308  XXXXXXXXXXST-AEMIIEGGMNFVR 234
                       T AEMIIEG +NF R
Sbjct: 1348 LLEASGVGAMGTAAEMIIEGSLNFAR 1373


>ref|XP_004247142.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like [Solanum lycopersicum]
          Length = 1321

 Score =  112 bits (280), Expect = 5e-23
 Identities = 55/87 (63%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = -1

Query: 491  GALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQW-NEEXXX 315
            G L GKISLGCNK+TW++YVSG ISL+V CTP+WLLEVDVE+LK +SMGLKQW  EE   
Sbjct: 1235 GVLHGKISLGCNKSTWKSYVSGLISLIVRCTPNWLLEVDVEVLKSISMGLKQWGEEELAL 1294

Query: 314  XXXXXXXXXXXXSTAEMIIEGGMNFVR 234
                        +TAEMI+EGGMNFV+
Sbjct: 1295 SLLSSSGIGAMGATAEMIVEGGMNFVK 1321


>ref|XP_004240641.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like [Solanum lycopersicum]
          Length = 1336

 Score =  111 bits (278), Expect = 9e-23
 Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEEXXXXX 309
            ALDGKISLGCNKATWRAYVSGF+SL+VGCTPSWLLEVD+++LKRLS GLK+ +EE     
Sbjct: 1251 ALDGKISLGCNKATWRAYVSGFVSLIVGCTPSWLLEVDLQVLKRLSKGLKRCDEEVLALA 1310

Query: 308  XXXXXXXXXXST-AEMIIEGGMNFVR 234
                       T A+MIIEG +NF R
Sbjct: 1311 LLEASGVGAMGTAAQMIIEGSLNFAR 1336


>ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like [Cucumis sativus]
          Length = 1311

 Score =  104 bits (259), Expect = 1e-20
 Identities = 46/55 (83%), Positives = 53/55 (96%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
            ALDGKISLGC+ ATWRAYV+GF+SLMVGCTPSW+L+VDVE+LKRLS GL+QWNEE
Sbjct: 1230 ALDGKISLGCDWATWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSSGLRQWNEE 1284


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  104 bits (259), Expect = 1e-20
 Identities = 46/55 (83%), Positives = 53/55 (96%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
            ALDGKISLGC+ ATWRAYV+GF+SLMVGCTPSW+L+VDVE+LKRLS GL+QWNEE
Sbjct: 2631 ALDGKISLGCDWATWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSSGLRQWNEE 2685


>gb|EOY05511.1| REF4-related 1 [Theobroma cacao]
          Length = 1325

 Score =  103 bits (257), Expect = 2e-20
 Identities = 45/55 (81%), Positives = 53/55 (96%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
            ALDGKISLGC+ ATWRAYVSGF+SLMVGCTP+W+LEVDV++L+RLS GL+QWNEE
Sbjct: 1244 ALDGKISLGCDGATWRAYVSGFVSLMVGCTPNWVLEVDVDVLRRLSKGLRQWNEE 1298


>ref|XP_006419799.1| hypothetical protein CICLE_v10006738mg [Citrus clementina]
            gi|568872251|ref|XP_006489285.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 33A-like [Citrus
            sinensis] gi|557521672|gb|ESR33039.1| hypothetical
            protein CICLE_v10006738mg [Citrus clementina]
          Length = 1331

 Score =  102 bits (255), Expect = 4e-20
 Identities = 46/55 (83%), Positives = 51/55 (92%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
            ALDGKISLGC+ ATW AYVSGF+SLMV CTP+W+LEVDVE+LKRLS GLKQWNEE
Sbjct: 1250 ALDGKISLGCDSATWHAYVSGFMSLMVSCTPTWVLEVDVEVLKRLSKGLKQWNEE 1304


>gb|EMJ26654.1| hypothetical protein PRUPE_ppa000298mg [Prunus persica]
          Length = 1326

 Score =  102 bits (255), Expect = 4e-20
 Identities = 45/55 (81%), Positives = 51/55 (92%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
            ALDGKISLGC+ ATWRAYVSGF++LMVGCTP W+LEVDV +LKRLS GL+QWNEE
Sbjct: 1245 ALDGKISLGCDSATWRAYVSGFVTLMVGCTPKWVLEVDVHVLKRLSNGLRQWNEE 1299


>gb|EXB95840.1| hypothetical protein L484_010039 [Morus notabilis]
          Length = 1285

 Score =  101 bits (252), Expect = 9e-20
 Identities = 45/54 (83%), Positives = 51/54 (94%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNE 327
            ALDGKISLGC+ A WRAYVSGF+SLMVGCTP+W+LEVDV++LKRLS GLKQWNE
Sbjct: 1207 ALDGKISLGCDDAMWRAYVSGFVSLMVGCTPNWVLEVDVDVLKRLSNGLKQWNE 1260


>ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247741 [Vitis vinifera]
            gi|297736973|emb|CBI26174.3| unnamed protein product
            [Vitis vinifera]
          Length = 1305

 Score =  101 bits (252), Expect = 9e-20
 Identities = 45/55 (81%), Positives = 51/55 (92%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
            ALDG ISLGC+ ATWRAYVSGF+SLMVGCTP+W+LEVDV +LKRLS GL+QWNEE
Sbjct: 1224 ALDGNISLGCDCATWRAYVSGFVSLMVGCTPTWVLEVDVNVLKRLSKGLRQWNEE 1278


>ref|XP_002311827.1| hypothetical protein POPTR_0008s20610g [Populus trichocarpa]
            gi|222851647|gb|EEE89194.1| hypothetical protein
            POPTR_0008s20610g [Populus trichocarpa]
          Length = 1304

 Score =  100 bits (250), Expect = 2e-19
 Identities = 44/55 (80%), Positives = 51/55 (92%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
            ALDGKISLGC+  TWRAYVSGF+SLMVGCTPSW+LEVD ++LKRLS GL+QWNE+
Sbjct: 1224 ALDGKISLGCDCTTWRAYVSGFVSLMVGCTPSWVLEVDADVLKRLSKGLRQWNEK 1278


>ref|XP_003547235.2| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like [Glycine max]
          Length = 1316

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 45/55 (81%), Positives = 51/55 (92%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
            ALDGKISLGC+ ATWRAYVSGF+SLMVGCTP+W+LEVDV +LKRLS GL+Q NEE
Sbjct: 1235 ALDGKISLGCDSATWRAYVSGFVSLMVGCTPNWVLEVDVHVLKRLSNGLRQLNEE 1289


>ref|XP_006594439.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like isoform X2 [Glycine max]
          Length = 1195

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 45/55 (81%), Positives = 51/55 (92%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
            ALDGKISLGC+ ATWRAYVSGF+SLMVGCTP+W+LEVDV +LKRLS GL+Q NEE
Sbjct: 1114 ALDGKISLGCDSATWRAYVSGFVSLMVGCTPNWVLEVDVHVLKRLSNGLRQLNEE 1168


>ref|XP_006594438.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like isoform X1 [Glycine max]
          Length = 1322

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 45/55 (81%), Positives = 51/55 (92%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
            ALDGKISLGC+ ATWRAYVSGF+SLMVGCTP+W+LEVDV +LKRLS GL+Q NEE
Sbjct: 1241 ALDGKISLGCDSATWRAYVSGFVSLMVGCTPNWVLEVDVHVLKRLSNGLRQLNEE 1295


>ref|XP_004298175.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like [Fragaria vesca subsp. vesca]
          Length = 1322

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 44/55 (80%), Positives = 51/55 (92%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
            ALDGKISLGC+ ATWRAYVSGF +LMVGCT +W+LEVDVE+LKRLS GL++WNEE
Sbjct: 1241 ALDGKISLGCDSATWRAYVSGFATLMVGCTSNWMLEVDVEVLKRLSNGLRKWNEE 1295


>ref|XP_002516789.1| conserved hypothetical protein [Ricinus communis]
            gi|223543877|gb|EEF45403.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1325

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 49/79 (62%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNE-EXXXX 312
            ALDGKISLGC+ ATWR+YVSGF+SLMVGC PSW+LEVD ++LKRLS GL+QWNE E    
Sbjct: 1245 ALDGKISLGCDWATWRSYVSGFVSLMVGCAPSWVLEVDADVLKRLSKGLRQWNEGELALA 1304

Query: 311  XXXXXXXXXXXSTAEMIIE 255
                       + AE+IIE
Sbjct: 1305 LLGIGGVETMGAAAELIIE 1323


>gb|ESW19779.1| hypothetical protein PHAVU_006G154900g [Phaseolus vulgaris]
          Length = 1332

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 44/55 (80%), Positives = 50/55 (90%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
            ALDGKISLGC+ ATWRAYVSGF+SLMV CTP+W+LEVDV +LKRLS GL+Q NEE
Sbjct: 1251 ALDGKISLGCDSATWRAYVSGFVSLMVDCTPNWVLEVDVHVLKRLSNGLRQLNEE 1305


>ref|XP_003594102.1| hypothetical protein MTR_2g021400 [Medicago truncatula]
           gi|355483150|gb|AES64353.1| hypothetical protein
           MTR_2g021400 [Medicago truncatula]
          Length = 770

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 44/55 (80%), Positives = 50/55 (90%)
 Frame = -1

Query: 488 ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
           ALDGKISLGC+ ATWRAYVSGF+SLMVGC P+W+LEVDV +LKRLS GL+Q NEE
Sbjct: 689 ALDGKISLGCDPATWRAYVSGFVSLMVGCIPNWVLEVDVNVLKRLSNGLRQLNEE 743


>gb|EXB39334.1| hypothetical protein L484_025029 [Morus notabilis]
          Length = 1330

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 42/55 (76%), Positives = 49/55 (89%)
 Frame = -1

Query: 488  ALDGKISLGCNKATWRAYVSGFISLMVGCTPSWLLEVDVEILKRLSMGLKQWNEE 324
            ALDGKISLGC+ ATW AYVSG +SLMVGCT  WL+E+DV++LKRLS GL+QWNEE
Sbjct: 1249 ALDGKISLGCDLATWWAYVSGVVSLMVGCTQKWLMEIDVDVLKRLSKGLRQWNEE 1303


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