BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00015847
         (580 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   138   1e-49
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         132   2e-49
gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]     130   2e-47
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc...   119   1e-44
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...   119   9e-44
gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptas...   124   1e-43
emb|CCH50954.1| T1.2 [Malus x robusta]                                106   8e-39
gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Tritic...   115   2e-38
gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]        96   5e-34
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He...    99   3e-32
gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   100   5e-32
gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   100   5e-32
gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   100   5e-32
emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta...    94   1e-31
emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-dir...    95   5e-31
emb|CDJ81301.1| unnamed protein product [Haemonchus contortus]         91   1e-30
emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcripta...    95   1e-30
emb|CDJ97543.1| RNA-directed DNA polymerase (reverse transcripta...    92   7e-30
gb|EHJ70553.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   100   3e-29
gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   100   3e-29

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score =  138 bits (347), Expect(2) = 1e-49
 Identities = 65/107 (60%), Positives = 86/107 (80%)
 Frame = +2

Query: 254 LVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQ 433
           L+E YR+ K+DLH++FIDLEKAYD+VSR+++ R LE +GV V Y +AIK+MY+G KT V+
Sbjct: 291 LMERYRDGKKDLHMVFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVR 350

Query: 434 TIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWCMLF 574
           T  G +E F + +GLHQGS+LSP+LFALVMD LT  IQ ++ WCMLF
Sbjct: 351 TYEGQTESFPITVGLHQGSSLSPYLFALVMDELTGHIQDDIPWCMLF 397



 Score = 84.7 bits (208), Expect(2) = 1e-49
 Identities = 40/78 (51%), Positives = 50/78 (64%)
 Frame = +1

Query: 7   LFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXXGD 186
           LFN I KT +MP EWR S ++P+YKNKGD+Q+C NYRGIKL+SHT              +
Sbjct: 206 LFNRILKTKKMPNEWRTSPLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLRQE 265

Query: 187 VCIFEN*FRFMLGRSTTE 240
             + +N F FM GRST E
Sbjct: 266 TRVSDNQFGFMPGRSTME 283


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  132 bits (332), Expect(2) = 2e-49
 Identities = 64/109 (58%), Positives = 82/109 (75%)
 Frame = +2

Query: 254 LVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQ 433
           ++E YR  KRDLH++FIDLEKAYD+V REVL + LE   V + Y RAIK+MYDG  T V+
Sbjct: 181 MMERYRSNKRDLHMVFIDLEKAYDRVPREVLWKVLEKMRVRIAYIRAIKDMYDGATTSVK 240

Query: 434 TIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWCMLFVD 580
           T GG +E F + +GLHQGS+LSP+LF +V++VLT  IQ  V WC+LF D
Sbjct: 241 TQGGVTEEFPIGIGLHQGSSLSPYLFTIVLEVLTEHIQEPVPWCILFAD 289



 Score = 90.1 bits (222), Expect(2) = 2e-49
 Identities = 43/80 (53%), Positives = 53/80 (66%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXX 180
           TKLFN I ++ +MP EWR ST++P+YKNKGDIQSC NYRGIKL++HT             
Sbjct: 94  TKLFNEILRSKKMPGEWRKSTLVPIYKNKGDIQSCENYRGIKLMTHTMKLWERVIERGLR 153

Query: 181 GDVCIFEN*FRFMLGRSTTE 240
            +  + EN F FM GRS TE
Sbjct: 154 KETQVTENQFGFMSGRSITE 173


>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
          Length = 605

 Score =  130 bits (327), Expect(2) = 2e-47
 Identities = 62/109 (56%), Positives = 81/109 (74%)
 Frame = +2

Query: 254 LVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQ 433
           L+E YRE+K+DLH++FIDLEK+YDK+ R V+   L+   VP  Y   IK+MYD V T V+
Sbjct: 110 LMERYREQKKDLHMVFIDLEKSYDKIPRNVMWWALKKHKVPAKYITLIKDMYDNVVTSVR 169

Query: 434 TIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWCMLFVD 580
           T   D++ F + +GLHQGS LSP+LFALVMD +TR IQG++ WCMLF D
Sbjct: 170 TSDVDTDDFPIKIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFAD 218



 Score = 84.7 bits (208), Expect(2) = 2e-47
 Identities = 40/80 (50%), Positives = 51/80 (63%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXX 180
           TKLFN+IF+  +MPEEWR S ++P++KNK D+Q C NYRGIKL+SHT             
Sbjct: 23  TKLFNLIFRANKMPEEWRRSILVPIFKNKEDVQGCTNYRGIKLMSHTMKLWERVIEHRLR 82

Query: 181 GDVCIFEN*FRFMLGRSTTE 240
               + +N F FM GRST E
Sbjct: 83  RMTSVTKNQFGFMPGRSTME 102


>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
          Length = 1134

 Score =  119 bits (298), Expect(2) = 1e-44
 Identities = 58/105 (55%), Positives = 76/105 (72%)
 Frame = +2

Query: 266 YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQTIGG 445
           YRE+K+DLH++FIDLEKAY+K+ R  L   L+   VP  Y   IK+MYD   T V+T   
Sbjct: 444 YREQKKDLHMVFIDLEKAYNKIPRN-LWWALDKHKVPAKYITLIKDMYDNAVTSVRTSDI 502

Query: 446 DSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWCMLFVD 580
           D++ F + +GLHQGS LSP+LFAL+MD +TR IQG++ WCMLF D
Sbjct: 503 DTDDFPIKIGLHQGSALSPYLFALLMDEVTRDIQGDIPWCMLFAD 547



 Score = 87.0 bits (214), Expect(2) = 1e-44
 Identities = 41/80 (51%), Positives = 52/80 (65%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXX 180
           TKLFN+IF+  +MPEEWR S ++P++KNKGD+Q C NYRGIKL+SHT             
Sbjct: 353 TKLFNLIFRANKMPEEWRRSILVPIFKNKGDVQICTNYRGIKLMSHTMKLWERVIEHRLR 412

Query: 181 GDVCIFEN*FRFMLGRSTTE 240
               + +N F FM GRST E
Sbjct: 413 RMTSVTKNQFGFMPGRSTME 432


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score =  119 bits (298), Expect(2) = 9e-44
 Identities = 58/109 (53%), Positives = 77/109 (70%)
 Frame = +2

Query: 254 LVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQ 433
           ++E YR  K+DLH++F DLEK YD+V RE+L + LE + V + Y RAIK+MY+   T V+
Sbjct: 269 VMERYRTDKKDLHLVFFDLEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVK 328

Query: 434 TIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWCMLFVD 580
           T  G +E F + +GLHQGSTL+P+LF LV+DVLT  IQ     CMLF D
Sbjct: 329 TQDGTTEDFPITIGLHQGSTLTPYLFTLVLDVLTEHIQELAPRCMLFAD 377



 Score = 84.0 bits (206), Expect(2) = 9e-44
 Identities = 41/78 (52%), Positives = 51/78 (65%)
 Frame = +1

Query: 7   LFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXXGD 186
           LFN I +T +M +EWR ST+IP+ KNKGDIQ+C NYRGIKL+SHT              +
Sbjct: 184 LFNEIIRTKKMSDEWRRSTLIPIDKNKGDIQNCANYRGIKLMSHTMKLWERVIKRRLRKE 243

Query: 187 VCIFEN*FRFMLGRSTTE 240
             + +N F FMLGRST E
Sbjct: 244 TLVTDNQFGFMLGRSTME 261


>gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 243

 Score =  124 bits (312), Expect(2) = 1e-43
 Identities = 60/109 (55%), Positives = 81/109 (74%)
 Frame = +2

Query: 254 LVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQ 433
           ++E YR  K+DLH++FIDLEKAYD+V RE+L + L+ +GV + Y +AI++MY+G  T V+
Sbjct: 120 VMERYRTDKKDLHLVFIDLEKAYDRVPREILWKALKKKGVRIAYIKAIQDMYEGASTCVR 179

Query: 434 TIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWCMLFVD 580
           T  GD+  F + +GLHQGSTLSP+LF LV+DVLT  IQ     CMLF D
Sbjct: 180 TQDGDTVDFPITIGLHQGSTLSPYLFTLVLDVLTEHIQELAPRCMLFAD 228



 Score = 78.2 bits (191), Expect(2) = 1e-43
 Identities = 35/47 (74%), Positives = 40/47 (85%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHT 141
           TKLFN I KT +M +EWR ST+IP+YKNKGDIQ C NYRGIKL+SHT
Sbjct: 57  TKLFNEIMKTKKMLDEWRRSTLIPIYKNKGDIQHCANYRGIKLMSHT 103


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score =  106 bits (265), Expect(2) = 8e-39
 Identities = 52/88 (59%), Positives = 67/88 (76%)
 Frame = +2

Query: 254 LVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQ 433
           L+E YR+ K DLH++FIDLEK YD+V R++L R LE +GV V Y +AIK+MYDG KT V+
Sbjct: 310 LMEKYRDGKNDLHMVFIDLEKVYDRVPRDILWRILEKKGVRVAYIQAIKDMYDGAKTAVR 369

Query: 434 TIGGDSEHFLVMMGLHQGSTLSPFLFAL 517
           T  G  E F + + LHQGS+LSP+LFAL
Sbjct: 370 TYEGQIESFPITVRLHQGSSLSPYLFAL 397



 Score = 80.1 bits (196), Expect(2) = 8e-39
 Identities = 40/80 (50%), Positives = 49/80 (61%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXX 180
           T LFN I K  +M  EWR ST++P+YKNKGDIQ+C NYRGIKL+SHT             
Sbjct: 223 TDLFNRILKMKKMSNEWRNSTLVPIYKNKGDIQNCMNYRGIKLMSHTMKLLARVIEHRLR 282

Query: 181 GDVCIFEN*FRFMLGRSTTE 240
               + +N F+FM G ST E
Sbjct: 283 QKTRVSDNQFKFMPGCSTME 302


>gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Triticum urartu]
          Length = 974

 Score =  115 bits (287), Expect(2) = 2e-38
 Identities = 57/101 (56%), Positives = 74/101 (73%)
 Frame = +2

Query: 254 LVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQ 433
           L++ YRE+K+DLH++FIDLEKAYDK+ R V+   LE   VP  Y   IK+MYD V T V+
Sbjct: 76  LMKRYREQKKDLHMVFIDLEKAYDKIPRNVMWWALEKHKVPTKYITLIKDMYDNVVTSVR 135

Query: 434 TIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNV 556
           T   D + F + +GLHQGS LSP+LFALVMD +TR IQG++
Sbjct: 136 TSDVDIDDFPIKIGLHQGSALSPYLFALVMDEVTRDIQGDI 176



 Score = 70.5 bits (171), Expect(2) = 2e-38
 Identities = 34/68 (50%), Positives = 42/68 (61%)
 Frame = +1

Query: 37  MPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXXGDVCIFEN*FRF 216
           MPEEWR S ++P++KNKGD+QS  NYRGIKL+SHT                 + +N F F
Sbjct: 1   MPEEWRLSILVPIFKNKGDVQSFTNYRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGF 60

Query: 217 MLGRSTTE 240
           M GRST E
Sbjct: 61  MPGRSTME 68


>gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 996

 Score = 95.5 bits (236), Expect(2) = 5e-34
 Identities = 45/109 (41%), Positives = 68/109 (62%)
 Frame = +2

Query: 254 LVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQ 433
           + E YRE+ R L++ F+D+EKA+D+V R+ +   L  + VP  Y   I +MY   ++ V+
Sbjct: 632 IAEEYREKLRPLYVAFLDMEKAFDRVPRDTIWWSLRKKNVPEHYVNVIIDMYRDARSMVR 691

Query: 434 TIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWCMLFVD 580
           T+ G ++   V  GLHQGS LSPFLF +V+D LT   Q + SW  ++ D
Sbjct: 692 TVVGQTKPIAVAEGLHQGSVLSPFLFGMVIDSLTEVAQSSASWTFIYAD 740



 Score = 75.1 bits (183), Expect(2) = 5e-34
 Identities = 34/80 (42%), Positives = 49/80 (61%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXX 180
           TKLFN + ++++MP  WR ST++P+YK KG    C+NYRGIKLLSHT             
Sbjct: 545 TKLFNCVLRSSKMPAAWRLSTIVPIYKGKGSKYECSNYRGIKLLSHTMKLYERVIDSRLR 604

Query: 181 GDVCIFEN*FRFMLGRSTTE 240
            +  + +N + F+ G STT+
Sbjct: 605 SECSLSKNHYGFVQGLSTTD 624


>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
          Length = 990

 Score = 99.4 bits (246), Expect(2) = 3e-32
 Identities = 46/109 (42%), Positives = 70/109 (64%)
 Frame = +2

Query: 254 LVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQ 433
           L+E YRE++R LH+ F+DL+KA+D V R+ +   L  +G+P  Y   I+ MY    + V+
Sbjct: 630 LMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRSKGIPEAYIEIIRGMYHDSASMVR 689

Query: 434 TIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWCMLFVD 580
           T  GD+  F + +G+HQGS LSPFLF +V+D ++  IQ    W M++ D
Sbjct: 690 TAVGDTRPFPITVGVHQGSALSPFLFNVVLDTVSAHIQDQPPWLMMYAD 738



 Score = 65.5 bits (158), Expect(2) = 3e-32
 Identities = 30/80 (37%), Positives = 43/80 (53%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXX 180
           T LFN I  T +MP +WR S + P+YK +G +Q C +YRGIKL+SHT             
Sbjct: 543 TDLFNHILNTGKMPHQWRLSFITPIYKGRGSVQDCGSYRGIKLMSHTMKLFERMIDLRLR 602

Query: 181 GDVCIFEN*FRFMLGRSTTE 240
            +  + E+ + F  G  T +
Sbjct: 603 RECTVSESQYGFQPGSGTMD 622


>gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 1253

 Score =  100 bits (250), Expect(2) = 5e-32
 Identities = 50/125 (40%), Positives = 79/125 (63%)
 Frame = +2

Query: 206  SLDSCWGVRLQKSXXXLVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTY 385
            +LD+ + +R       L+E YRE++R LH+ F+DL+KA+D V R+ +   L  +G+P  Y
Sbjct: 887  TLDAIFAIRT------LMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAY 940

Query: 386  TRAIKNMYDGVKTRVQTIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWC 565
               I++MY    + V+T  GD++ F + +GLHQGS LSPFLF +V+D ++  IQ    W 
Sbjct: 941  IDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWL 1000

Query: 566  MLFVD 580
            M++ D
Sbjct: 1001 MMYAD 1005



 Score = 63.2 bits (152), Expect(2) = 5e-32
 Identities = 23/47 (48%), Positives = 34/47 (72%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHT 141
           T LFN +  T  MP +WR+S + P+YK +G +Q C +YRG+K++SHT
Sbjct: 810 TDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHT 856


>gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 985

 Score =  100 bits (250), Expect(2) = 5e-32
 Identities = 50/125 (40%), Positives = 79/125 (63%)
 Frame = +2

Query: 206 SLDSCWGVRLQKSXXXLVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTY 385
           +LD+ + +R       L+E YRE++R LH+ F+DL+KA+D V R+ +   L  +G+P  Y
Sbjct: 619 TLDAIFAIRT------LMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAY 672

Query: 386 TRAIKNMYDGVKTRVQTIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWC 565
              I++MY    + V+T  GD++ F + +GLHQGS LSPFLF +V+D ++  IQ    W 
Sbjct: 673 IDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWL 732

Query: 566 MLFVD 580
           M++ D
Sbjct: 733 MMYAD 737



 Score = 63.2 bits (152), Expect(2) = 5e-32
 Identities = 23/47 (48%), Positives = 34/47 (72%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHT 141
           T LFN +  T  MP +WR+S + P+YK +G +Q C +YRG+K++SHT
Sbjct: 542 TDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHT 588


>gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 472

 Score =  100 bits (250), Expect(2) = 5e-32
 Identities = 50/125 (40%), Positives = 79/125 (63%)
 Frame = +2

Query: 206 SLDSCWGVRLQKSXXXLVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTY 385
           +LD+ + +R       L+E YRE++R LH+ F+DL+KA+D V R+ +   L  +G+P  Y
Sbjct: 106 TLDAIFAIRT------LMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAY 159

Query: 386 TRAIKNMYDGVKTRVQTIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWC 565
              I++MY    + V+T  GD++ F + +GLHQGS LSPFLF +V+D ++  IQ    W 
Sbjct: 160 IDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWL 219

Query: 566 MLFVD 580
           M++ D
Sbjct: 220 MMYAD 224



 Score = 63.2 bits (152), Expect(2) = 5e-32
 Identities = 23/47 (48%), Positives = 34/47 (72%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHT 141
           T LFN +  T  MP +WR+S + P+YK +G +Q C +YRG+K++SHT
Sbjct: 29  TDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHT 75


>emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain
           containing protein [Haemonchus contortus]
          Length = 1526

 Score = 94.0 bits (232), Expect(2) = 1e-31
 Identities = 47/105 (44%), Positives = 67/105 (63%)
 Frame = +2

Query: 266 YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQTIGG 445
           YRE++R  +I F+DLEKA+D++ R+VL R L  R VP      +K+MYDG  T ++T  G
Sbjct: 662 YREKRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRTPHG 721

Query: 446 DSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWCMLFVD 580
            +    V +G+HQGS LSPFLF L MDV+T ++       +L+ D
Sbjct: 722 QTGAIDVTVGVHQGSALSPFLFLLTMDVITEELMDGPLKTILYAD 766



 Score = 68.6 bits (166), Expect(2) = 1e-31
 Identities = 33/80 (41%), Positives = 45/80 (56%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXX 180
           T+  N +    R+P+ WR ST++P++K KGD   C+NYRGI+L +HT             
Sbjct: 571 TRFLNTVTAKGRIPDAWRRSTIVPIFKQKGDAMDCSNYRGIRLAAHTMKLYERLVDSRLR 630

Query: 181 GDVCIFEN*FRFMLGRSTTE 240
             V I E  F FM GRSTT+
Sbjct: 631 ELVPISEKQFGFMPGRSTTD 650


>emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-directed DNA
           polymerase (reverse transcriptase) domain containing
           protein [Haemonchus contortus]
          Length = 816

 Score = 95.1 bits (235), Expect(2) = 5e-31
 Identities = 47/109 (43%), Positives = 69/109 (63%)
 Frame = +2

Query: 254 LVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQ 433
           ++E YRE++R  ++ F+DLEKA+D++ REVL   L  R VP      +K+MYDG  T ++
Sbjct: 595 IMEKYREKRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIR 654

Query: 434 TIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWCMLFVD 580
           T  G +    V +G+HQGS LSPFLF L MDV+T ++       +L+ D
Sbjct: 655 TAHGQTGAIDVTVGVHQGSALSPFLFLLTMDVITEELMDGPLKTILYAD 703



 Score = 65.5 bits (158), Expect(2) = 5e-31
 Identities = 32/80 (40%), Positives = 44/80 (55%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXX 180
           T+  N +    R+P+ WR ST++P++K KGD   C+NYRGI+L +HT             
Sbjct: 508 TRFLNTVTAEGRIPDAWRRSTIVPIFKQKGDAMDCSNYRGIRLTAHTMKLYERLVDSRLR 567

Query: 181 GDVCIFEN*FRFMLGRSTTE 240
             V I E  F FM  RSTT+
Sbjct: 568 ELVPISEGQFGFMPERSTTD 587


>emb|CDJ81301.1| unnamed protein product [Haemonchus contortus]
          Length = 499

 Score = 90.5 bits (223), Expect(2) = 1e-30
 Identities = 44/105 (41%), Positives = 65/105 (61%)
 Frame = +2

Query: 266 YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQTIGG 445
           YRE +R  ++ F+DLEKA+D++ REVL   L  R VP      +K+MYDG  T ++T  G
Sbjct: 389 YREMRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRTAHG 448

Query: 446 DSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWCMLFVD 580
            +    V +G+HQGS LSPFLF + MD++T ++       +L+ D
Sbjct: 449 HTGAIDVTVGVHQGSALSPFLFLITMDIITEKLMDGPLKTILYAD 493



 Score = 68.9 bits (167), Expect(2) = 1e-30
 Identities = 34/80 (42%), Positives = 45/80 (56%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXX 180
           TK  N +    R+P+ WR ST++P++K KGD   C+NYRGI+L +HT             
Sbjct: 298 TKFLNTVTAEGRIPDAWRRSTIVPIFKRKGDPMDCSNYRGIRLTAHTMKLYERMVDSRLR 357

Query: 181 GDVCIFEN*FRFMLGRSTTE 240
           G V I E  F FM  RSTT+
Sbjct: 358 GLVPISEKLFGFMPERSTTD 377


>emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcriptase) domain
           containing protein [Haemonchus contortus]
          Length = 479

 Score = 95.1 bits (235), Expect(2) = 1e-30
 Identities = 48/109 (44%), Positives = 70/109 (64%)
 Frame = +2

Query: 254 LVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQ 433
           ++E YRE++R  +I F+DLEKA+D++ R+VL R L  R VP      +K+MYDG  T ++
Sbjct: 119 VMEKYREKRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIR 178

Query: 434 TIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWCMLFVD 580
           T  G +    V +G+HQGS LSPFLF L MDV+T ++       +L+ D
Sbjct: 179 TPHGQTGAIDVTVGVHQGSALSPFLFLLTMDVITEELMDGPLKTILYAD 227



 Score = 64.3 bits (155), Expect(2) = 1e-30
 Identities = 31/80 (38%), Positives = 44/80 (55%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXX 180
           T+  N +    R+P+ WR ST++P++K KGD   C+NYRGI+L +HT             
Sbjct: 32  TRFLNTVTAEGRIPDAWRKSTIVPIFKQKGDAMECSNYRGIRLTTHTMKLYERLVDSRLR 91

Query: 181 GDVCIFEN*FRFMLGRSTTE 240
             V I +  F FM  RSTT+
Sbjct: 92  ELVPISQKQFGFMPERSTTD 111


>emb|CDJ97543.1| RNA-directed DNA polymerase (reverse transcriptase) domain
           containing protein [Haemonchus contortus]
          Length = 258

 Score = 92.4 bits (228), Expect(2) = 7e-30
 Identities = 46/95 (48%), Positives = 65/95 (68%)
 Frame = +2

Query: 254 LVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTYTRAIKNMYDGVKTRVQ 433
           ++E YRE++R  +I F+DLEKA+D++ R+VL R L  R VP      +K+MYDG  T ++
Sbjct: 119 VMEKYREKRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIR 178

Query: 434 TIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTR 538
           T  G +    V +G+HQGS LSPFLF L MDV+T+
Sbjct: 179 TPHGQTGAIDVTVGVHQGSALSPFLFLLTMDVITK 213



 Score = 64.3 bits (155), Expect(2) = 7e-30
 Identities = 31/80 (38%), Positives = 44/80 (55%)
 Frame = +1

Query: 1   TKLFNVIFKTARMPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHTXXXXXXXXXXXXX 180
           T+  N +    R+P+ WR ST++P++K KGD   C+NYRGI+L +HT             
Sbjct: 32  TRFLNTVTAEGRIPDAWRKSTIVPIFKQKGDAMECSNYRGIRLTAHTMKLYERLVDSRLR 91

Query: 181 GDVCIFEN*FRFMLGRSTTE 240
             V I +  F FM  RSTT+
Sbjct: 92  ELVPISQKQFGFMPERSTTD 111


>gb|EHJ70553.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 710

 Score =  100 bits (250), Expect(2) = 3e-29
 Identities = 50/125 (40%), Positives = 79/125 (63%)
 Frame = +2

Query: 206 SLDSCWGVRLQKSXXXLVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTY 385
           +LD+ + +R       L+E YRE++R LH+ F+DL+KA+D V R+ +   L  +G+P  Y
Sbjct: 66  TLDAIFAIRT------LMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAY 119

Query: 386 TRAIKNMYDGVKTRVQTIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWC 565
              I++MY    + V+T  GD++ F + +GLHQGS LSPFLF +V+D ++  IQ    W 
Sbjct: 120 IDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWL 179

Query: 566 MLFVD 580
           M++ D
Sbjct: 180 MMYAD 184



 Score = 53.9 bits (128), Expect(2) = 3e-29
 Identities = 18/35 (51%), Positives = 28/35 (80%)
 Frame = +1

Query: 37  MPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHT 141
           MP +WR+S + P+YK +G +Q C +YRG+K++SHT
Sbjct: 1   MPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHT 35


>gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 601

 Score =  100 bits (250), Expect(2) = 3e-29
 Identities = 50/125 (40%), Positives = 79/125 (63%)
 Frame = +2

Query: 206 SLDSCWGVRLQKSXXXLVE*YRERKRDLHIIFIDLEKAYDKVSREVL*RCLEVRGVPVTY 385
           +LD+ + +R       L+E YRE++R LH+ F+DL+KA+D V R+ +   L  +G+P  Y
Sbjct: 66  TLDAIFAIRT------LMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAY 119

Query: 386 TRAIKNMYDGVKTRVQTIGGDSEHFLVMMGLHQGSTLSPFLFALVMDVLTRQIQGNVSWC 565
              I++MY    + V+T  GD++ F + +GLHQGS LSPFLF +V+D ++  IQ    W 
Sbjct: 120 IDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWL 179

Query: 566 MLFVD 580
           M++ D
Sbjct: 180 MMYAD 184



 Score = 53.9 bits (128), Expect(2) = 3e-29
 Identities = 18/35 (51%), Positives = 28/35 (80%)
 Frame = +1

Query: 37  MPEEWRWSTMIPLYKNKGDIQSCNNYRGIKLLSHT 141
           MP +WR+S + P+YK +G +Q C +YRG+K++SHT
Sbjct: 1   MPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHT 35