BLASTX nr result
ID: Atropa21_contig00015796
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00015796
(1643 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein... 511 e-142
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein... 507 e-141
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 360 1e-96
gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus... 358 3e-96
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein... 358 4e-96
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein... 356 1e-95
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta... 353 9e-95
gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe... 348 5e-93
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote... 346 1e-92
gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao... 345 4e-92
ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein... 340 1e-90
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop... 335 3e-89
ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein... 330 8e-88
ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th... 330 1e-87
ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp.... 329 2e-87
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop... 329 2e-87
gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana] 328 5e-87
ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Caps... 326 2e-86
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein... 322 2e-85
ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutr... 320 9e-85
>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
tuberosum]
Length = 652
Score = 511 bits (1316), Expect = e-142
Identities = 271/382 (70%), Positives = 287/382 (75%)
Frame = +2
Query: 464 AAGRTNTGGRNRPPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKKRLD 643
AAGRTNTGGRNRPPQSSRRHHK KLSGSQVPLKKRLD
Sbjct: 12 AAGRTNTGGRNRPPQSSRRHHKSSYSDDGSDSRDDDSDDGRGYSGRKLSGSQVPLKKRLD 71
Query: 644 PPEXXXXXXXXXXXXXXXXXXXXXXSDDDSIGSDLYKDDDDRQKLAEMTELQREIILSDR 823
P E SDDDSIGSDLYKDDDDRQKLA+MTEL+RE+IL+DR
Sbjct: 72 PQERDDDHSSHGEGNDGDGYGNE--SDDDSIGSDLYKDDDDRQKLAQMTELEREMILTDR 129
Query: 824 AAKKSDRSLRDKMIKDRNPPRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLNEIRAKQAKR 1003
AAKKSDRSL DKMIKDR PRKQSSPPSHSRGMRSSTR + LNEIRAK+A++
Sbjct: 130 AAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALNEIRAKRARQ 189
Query: 1004 ARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHSNEGXXXXXX 1183
QQDPEGQ+KLRDAA FTA+TLGSSPTRGESDSHSNEG
Sbjct: 190 --QQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRGESDSHSNEGDSSADD 247
Query: 1184 XXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSG 1363
K SPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSG
Sbjct: 248 GMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSG 307
Query: 1364 PIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSDSAPLRDEFD 1543
PIYRLC+VRNVD+SDPNRQYKLENKTTSK+LNVVWGNE+SAARWQMAMVSDS PLRDEFD
Sbjct: 308 PIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMVSDSPPLRDEFD 367
Query: 1544 QWVREVERSGGRMPSKQDVFDQ 1609
QWVREVERSGGRMPSKQDV ++
Sbjct: 368 QWVREVERSGGRMPSKQDVLEK 389
>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
[Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
PREDICTED: RNA polymerase-associated protein RTF1 homolog
isoform 2 [Solanum lycopersicum]
Length = 645
Score = 507 bits (1306), Expect = e-141
Identities = 268/382 (70%), Positives = 286/382 (74%)
Frame = +2
Query: 464 AAGRTNTGGRNRPPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKKRLD 643
AAGRTNTGGRNRPP SS+RHHK KLSGSQVPLKKRLD
Sbjct: 12 AAGRTNTGGRNRPPHSSKRHHKSSYSDDGSDSRDDDSDDGRGYSGRKLSGSQVPLKKRLD 71
Query: 644 PPEXXXXXXXXXXXXXXXXXXXXXXSDDDSIGSDLYKDDDDRQKLAEMTELQREIILSDR 823
P E SDDDSIGSDLYKDDDDRQKLA+MTEL+RE+IL+DR
Sbjct: 72 PQERDDDHSSHGEGNDGDGYGNE--SDDDSIGSDLYKDDDDRQKLAQMTELEREMILTDR 129
Query: 824 AAKKSDRSLRDKMIKDRNPPRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLNEIRAKQAKR 1003
AAKKSDRSL DKMIKDR PRKQSSPPSHSRGMRSSTR + LNEIRAK+A++
Sbjct: 130 AAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALNEIRAKRARQ 189
Query: 1004 ARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHSNEGXXXXXX 1183
QQDPEGQ+KLRDAA FTA++LGSSPTRGESDSHSNEG
Sbjct: 190 --QQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESDSHSNEGDSSADD 247
Query: 1184 XXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSG 1363
K SPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSG
Sbjct: 248 GMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSG 307
Query: 1364 PIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSDSAPLRDEFD 1543
PIYRLC+VRNVDASDPNRQYKLENKTTSK+LNVVWGNE+SAARWQMAM+SDS PLRDEFD
Sbjct: 308 PIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMISDSPPLRDEFD 367
Query: 1544 QWVREVERSGGRMPSKQDVFDQ 1609
QWVREVERSGGRMPSKQDV ++
Sbjct: 368 QWVREVERSGGRMPSKQDVLEK 389
>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
[Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
RNA polymerase-associated protein RTF1 homolog isoform X2
[Glycine max]
Length = 656
Score = 360 bits (924), Expect = 1e-96
Identities = 209/389 (53%), Positives = 245/389 (62%), Gaps = 7/389 (1%)
Frame = +2
Query: 464 AAGRTNTGGRNRPP-QSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKKRL 640
AAGRT T GRNR SSRR H K SGSQVPLKKRL
Sbjct: 11 AAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPSGSQVPLKKRL 70
Query: 641 DPPEXXXXXXXXXXXXXXXXXXXXXXSDDDS-IGSDLYKDDDDRQKLAEMTELQREIILS 817
DP E S D+S IG DLYKD+DDR+KL+EMTELQRE+ILS
Sbjct: 71 DPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRKLSEMTELQREMILS 130
Query: 818 DRAAKKSDRSLRDKMIKDRNP-----PRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLNEI 982
DRA KK D++L K+ R PRKQS P S SR MR+S R+ LNE+
Sbjct: 131 DRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSR-MRASARSADRSAKNDA-LNEL 188
Query: 983 RAKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHSNE 1162
RAK R +QQDPE +LR+A+ + S SS + ES SHS++
Sbjct: 189 RAK---RLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSESESRSHSDD 245
Query: 1163 GXXXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVG 1342
+ S+ P+F+D+KEI+IRRSKLAKWFMEPFF+ELIVGCFVRVG
Sbjct: 246 EGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEELIVGCFVRVG 305
Query: 1343 IGRSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSDSA 1522
IGRS++GPIYRLCMV+NVDAS+P+RQYKLENKTT KYLNVVWGNESSAARWQMAMVSDSA
Sbjct: 306 IGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDSA 365
Query: 1523 PLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
PL +EF QWV+EV+RSGGRMPSKQDV ++
Sbjct: 366 PLEEEFKQWVKEVDRSGGRMPSKQDVLEK 394
>gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
Length = 654
Score = 358 bits (920), Expect = 3e-96
Identities = 210/392 (53%), Positives = 246/392 (62%), Gaps = 10/392 (2%)
Frame = +2
Query: 464 AAGRTNTGGRNR---PPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKK 634
AAGRT T GRNR PP SRR H K SGSQVPLKK
Sbjct: 11 AAGRTGTSGRNRHSLPP--SRRRHDGAYSDGGSDSRDDDSDDELNYASRKPSGSQVPLKK 68
Query: 635 RLDPPEXXXXXXXXXXXXXXXXXXXXXX--SDDDSIGSDLYKDDDDRQKLAEMTELQREI 808
RLDP E SD+ +IG DLYKD+DDR+KL+EMTELQRE+
Sbjct: 69 RLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDDRRKLSEMTELQREM 128
Query: 809 ILSDRAAKKSDRSLRDKMIKDRNP-----PRKQSSPPSHSRGMRSSTRTMXXXXXXXXXL 973
ILSDRA KK D++L K+ R PRKQS P S SR MR+S R+ L
Sbjct: 129 ILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMSSSR-MRASARSADRSAKNDA-L 186
Query: 974 NEIRAKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSH 1153
NE+RAK R +QQDPE KLR+A+ + S SS + ES SH
Sbjct: 187 NELRAK---RLKQQDPEAHRKLREASRNAGPRHFSPPKRKPFTSTSLSSSSHSESESRSH 243
Query: 1154 SNEGXXXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFV 1333
S++ + S+ P+F+DIKEI+IRRSKLAKWFMEPFF+ELIVGCFV
Sbjct: 244 SDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVGCFV 303
Query: 1334 RVGIGRSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVS 1513
RVGIGRS++GPIYRLCMV+NVDAS+P+RQYKLENKTT KYLNVVWGNESSAARWQMAMVS
Sbjct: 304 RVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVS 363
Query: 1514 DSAPLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
DSAPL +EF QWV+EV+RSGGRMP+KQDV ++
Sbjct: 364 DSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEK 395
>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
polymerase-associated protein RTF1 homolog [Cucumis
sativus]
Length = 660
Score = 358 bits (919), Expect = 4e-96
Identities = 206/392 (52%), Positives = 245/392 (62%), Gaps = 10/392 (2%)
Frame = +2
Query: 464 AAGRTNTGGRNR---PPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKK 634
AAGRTN GRNR PP SRR + K SGSQVPLKK
Sbjct: 11 AAGRTNAAGRNRHSHPP--SRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKK 68
Query: 635 RLDPPEXXXXXXXXXXXXXXXXXXXXXX--SDDDSIGSDLYKDDDDRQKLAEMTELQREI 808
RLDP E SD+ +G DLYKDDDDR+KLA M+ELQRE+
Sbjct: 69 RLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAGMSELQREM 128
Query: 809 ILSDRAAKKSDR----SLRDKMIKDRNPPRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLN 976
ILSDRA+KK+D+ SLR KM K ++ P ++ +PP S +RSS R+ LN
Sbjct: 129 ILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAAKDDALN 188
Query: 977 EIRAKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSP-TRGESDSH 1153
E+RAK R +QQDPE KLRDA+ FTA +L SS + ES
Sbjct: 189 ELRAK---RLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSESESRFQ 245
Query: 1154 SNEGXXXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFV 1333
S++ + P S PTFEDIKE++IRRSKLAKW MEPFF+ELIVGCFV
Sbjct: 246 SDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELIVGCFV 305
Query: 1334 RVGIGRSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVS 1513
RVGIGRSRSGPIYRLC+VRNVDA++P+RQYKLENK T KYLNV+WGNE+SAARWQMAMVS
Sbjct: 306 RVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMVS 365
Query: 1514 DSAPLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
DSAPL DE+ QWV+EVER+GGRM SKQD+ ++
Sbjct: 366 DSAPLEDEYKQWVKEVERTGGRMLSKQDILEK 397
>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 656
Score = 356 bits (914), Expect = 1e-95
Identities = 209/391 (53%), Positives = 245/391 (62%), Gaps = 9/391 (2%)
Frame = +2
Query: 464 AAGRTNTGGRNR---PPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKK 634
AAGRT T GRNR PP SRR H K SGSQVPLKK
Sbjct: 11 AAGRTGTAGRNRHSLPP--SRRRHDGAYSDGGSDSRDDDSDDELNYASRKPSGSQVPLKK 68
Query: 635 RLDPPEXXXXXXXXXXXXXXXXXXXXXXSDDDS-IGSDLYKDDDDRQKLAEMTELQREII 811
RLDP E S D+S IG DLYKD+DDR+KL+EMTELQRE+I
Sbjct: 69 RLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEMTELQREMI 128
Query: 812 LSDRAAKKSDRSLRDKMIKDRNP-----PRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLN 976
LSDRA KK D++L K+ R PRKQS P S SR MR+S R+ LN
Sbjct: 129 LSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR-MRASARSADRSAKNDA-LN 186
Query: 977 EIRAKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHS 1156
E+RAK R +QQDPE +LR+A+ + S SS + ES SHS
Sbjct: 187 ELRAK---RLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSESESRSHS 243
Query: 1157 NEGXXXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVR 1336
++ + S+ P+F+DIKEI+IRRSKLAKWFMEPFF+ELIVGCFVR
Sbjct: 244 DDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVGCFVR 303
Query: 1337 VGIGRSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSD 1516
VGIGRS++GPIYRLCMV+NVDAS+P+RQYKLENKTT KYLNVVWGNESSAARWQMAMVSD
Sbjct: 304 VGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSD 363
Query: 1517 SAPLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
SAP+ +EF QWV+EV+ SGGRMPSKQDV ++
Sbjct: 364 SAPMEEEFKQWVKEVDCSGGRMPSKQDVLEK 394
>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
gi|223541691|gb|EEF43239.1| RNA polymerase-associated
protein RTF1, putative [Ricinus communis]
Length = 660
Score = 353 bits (907), Expect = 9e-95
Identities = 200/392 (51%), Positives = 246/392 (62%), Gaps = 10/392 (2%)
Frame = +2
Query: 464 AAGRTNTGGRNR---PPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKK 634
AAGRT T GRNR PP SRR + K SGSQVPLKK
Sbjct: 11 AAGRTGTSGRNRNALPP--SRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPSGSQVPLKK 68
Query: 635 RLDPPEXXXXXXXXXXXXXXXXXXXXXX--SDDDSIGSDLYKDDDDRQKLAEMTELQREI 808
RLDP E SD +G DLYK++DDR+KLA+M+EL+RE+
Sbjct: 69 RLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQMSELEREM 128
Query: 809 ILSDRAAKKSDRSLRDKMIKDRNPPR-----KQSSPPSHSRGMRSSTRTMXXXXXXXXXL 973
ILS+RA KK D++L +++ R R K++ P SRG+R+S R+ L
Sbjct: 129 ILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADRAAAKDDAL 188
Query: 974 NEIRAKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSH 1153
NE++A+ R +QQDPE KLRDA+ FT+++L SS + ES SH
Sbjct: 189 NELKAR---RLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSSESESRSH 245
Query: 1154 SNEGXXXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFV 1333
S + E P SQ PTF+DI+EI+IRRSKLAKWFMEP+F+ELIVGCFV
Sbjct: 246 SEDEGSTGDGGMADSDDDGE-PGSQGPTFDDIREITIRRSKLAKWFMEPWFEELIVGCFV 304
Query: 1334 RVGIGRSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVS 1513
RVGIGRS+SGPIYRLC+VRNVDA+DP+R YKLENKTT KYLNV+WGNESSAARWQMAM+S
Sbjct: 305 RVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQMAMIS 364
Query: 1514 DSAPLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
DSAP DE+ QWVREVERSGGRMP+KQD+ ++
Sbjct: 365 DSAPTEDEYKQWVREVERSGGRMPTKQDILEK 396
>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
Length = 646
Score = 348 bits (892), Expect = 5e-93
Identities = 202/384 (52%), Positives = 240/384 (62%), Gaps = 2/384 (0%)
Frame = +2
Query: 464 AAGRTNTGGRNRPPQSS-RRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKKRL 640
AAGRT++ G++R SS RR K SG+QVPLKKRL
Sbjct: 11 AAGRTSSAGKSRHSHSSSRRRRGGSYSDGGSDSRGDDSDDGRGYASRKPSGTQVPLKKRL 70
Query: 641 DPPEXXXXXXXXXXXXXXXXXXXXXXSDDDS-IGSDLYKDDDDRQKLAEMTELQREIILS 817
DP E ++S +GSDLYKD+DDR+KLAEM+ELQRE+ILS
Sbjct: 71 DPTEMDDEQGSQEEGDYNDSGSDRGGDSNESDVGSDLYKDEDDRRKLAEMSELQRELILS 130
Query: 818 DRAAKKSDRSLRDKMIKDRNPPRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLNEIRAKQA 997
DRA KK D+SL++K P+K++ PP S +RSS R+ LNE+RAK
Sbjct: 131 DRAQKKDDKSLKEKF-----RPKKET-PPLPSSRVRSSARSADRAAAKDDALNELRAK-- 182
Query: 998 KRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHSNEGXXXX 1177
R +QQDPE KLRDA+ FTA SS +SDS S
Sbjct: 183 -RLKQQDPEAHRKLRDASRGSSGSRSFSHMTRKSFTAVGRSSS---SQSDSDSRSHSEDD 238
Query: 1178 XXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSR 1357
+ S+ TF+DIKEI+IRRSKLAKW MEPFF+ELIVGCFVRVGIGRS+
Sbjct: 239 GSTGEDPMMDSDDERSEGLTFDDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSK 298
Query: 1358 SGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSDSAPLRDE 1537
SGPIYRLCMVRNVDASDP+R+YKLENKTT KYLNVVWGNE+SAARWQMAM+SDSAPL +E
Sbjct: 299 SGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAARWQMAMISDSAPLEEE 358
Query: 1538 FDQWVREVERSGGRMPSKQDVFDQ 1609
F QWVREVERSGGR+PSKQDV ++
Sbjct: 359 FKQWVREVERSGGRLPSKQDVLEK 382
>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis]
Length = 658
Score = 346 bits (888), Expect = 1e-92
Identities = 201/391 (51%), Positives = 244/391 (62%), Gaps = 9/391 (2%)
Frame = +2
Query: 464 AAGRTNTGGRNR---PPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKK 634
AAGRT + GRNR PP SRR + K SGSQVPLKK
Sbjct: 11 AAGRTRSAGRNRHSIPP--SRRRREGSYSDGGSDSRDDDSDDDRGYANRKPSGSQVPLKK 68
Query: 635 RLDPPEXXXXXXXXXXXXXXXXXXXXXXSDDDSIGSDLYKDDDDRQKLAEMTELQREIIL 814
RLDP E S+ D +GSDLYKDDDDR+KLAEMTELQRE+IL
Sbjct: 69 RLDPTEMDDDQGSEEEGDDDRGSDREGDSESD-VGSDLYKDDDDRRKLAEMTELQREMIL 127
Query: 815 SDRAAKKSDRSLRDKMI-----KDRNPPRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLNE 979
DRA+KK D++L++K+ K + ++ +P SR +RSS R+ LNE
Sbjct: 128 LDRASKKEDKNLKEKLRPKWDNKGKATQSRKETPLPSSR-VRSSARSADRAAAKDDALNE 186
Query: 980 IRAKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSP-TRGESDSHS 1156
+RAK R +QQDPE KLRDA+ +TA++L SS + ES+S S
Sbjct: 187 LRAK---RLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSDSESESQS 243
Query: 1157 NEGXXXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVR 1336
+ + P S+ TF+DIKE+++RRSKLAKW MEPFF+ELIVGCFVR
Sbjct: 244 EDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEELIVGCFVR 303
Query: 1337 VGIGRSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSD 1516
VGIGRS+SGPIYRLCMVRNVDAS+P+RQYKL+NK T KYLNVVWGNE+SAARWQMAMVSD
Sbjct: 304 VGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARWQMAMVSD 363
Query: 1517 SAPLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
S P +EF QWVREVERSGGRMP+K D+ D+
Sbjct: 364 SVPNEEEFKQWVREVERSGGRMPTKHDILDK 394
>gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao]
gi|508781058|gb|EOY28314.1| PAF1 complex component
isoform 1 [Theobroma cacao]
Length = 660
Score = 345 bits (884), Expect = 4e-92
Identities = 202/396 (51%), Positives = 244/396 (61%), Gaps = 14/396 (3%)
Frame = +2
Query: 464 AAGRTNTGGRNR---PPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKK 634
AAGRT TGGRNR PP SRR + K SGSQVPLKK
Sbjct: 11 AAGRTGTGGRNRHSLPP--SRRRREGSYSDGGSDSRDDDSDDDHGYASRKPSGSQVPLKK 68
Query: 635 RLDPPEXXXXXXXXXXXXXXXXXXXXXX--SDDDSIGSDLYKDDDDRQKLAEMTELQREI 808
RLDP E SD+ +G DLYK++DDR+KLA+MTEL+RE+
Sbjct: 69 RLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQMTELEREL 128
Query: 809 ILSDRAAKKSDRSLRDKMIKDR-----NPPRKQSSPPSHSRGMRSSTRTMXXXXXXXXXL 973
ILS+RA K+ D+ +K+ R + RK++ P SRG+RSS R+ L
Sbjct: 129 ILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADRAAAKDDAL 188
Query: 974 NEIRAKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSH 1153
NE+RAK R +QQDPE KLRDA+ FTAS+L SS ++ +S+S
Sbjct: 189 NELRAK---RLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSS-SQSDSESR 244
Query: 1154 SNE----GXXXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIV 1321
SN + P+ PTF+DIKEI+IRRSKLAKWFMEPFF+ELIV
Sbjct: 245 SNSEDEGSTGDGGMVDSDDDRGMQGPDG--PTFDDIKEITIRRSKLAKWFMEPFFEELIV 302
Query: 1322 GCFVRVGIGRSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQM 1501
GC+VRVGIGRS+SGPIYRLCMVRNVDA++P R YKLENKTT KYLNVVWGNESSAARWQM
Sbjct: 303 GCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARWQM 362
Query: 1502 AMVSDSAPLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
AM+SDS P +EF Q +RE+ERSGGRMPSKQDV ++
Sbjct: 363 AMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEK 398
>ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
[Cicer arietinum] gi|502142571|ref|XP_004505023.1|
PREDICTED: RNA polymerase-associated protein RTF1 homolog
isoform X2 [Cicer arietinum]
Length = 658
Score = 340 bits (872), Expect = 1e-90
Identities = 200/392 (51%), Positives = 243/392 (61%), Gaps = 10/392 (2%)
Frame = +2
Query: 464 AAGRTN-TGGRNR---PPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLK 631
AAGRT GRNR PP SRR K SGSQVPLK
Sbjct: 11 AAGRTGGAAGRNRHSIPP--SRRRRDGSYSDGGSDSRDDDSDDELNYPSRKPSGSQVPLK 68
Query: 632 KRLDPPEXXXXXXXXXXXXXXXXXXXXXX--SDDDSIGSDLYKDDDDRQKLAEMTELQRE 805
KRLDP E SD+ +IG DLYKD+DDR+KL+EM+ELQRE
Sbjct: 69 KRLDPTERDDDLGSQEEADDDDGRSDREGDSSDESNIGDDLYKDEDDRRKLSEMSELQRE 128
Query: 806 IILSDRAAKKSDRSLRDKMIKDRNPPRK----QSSPPSHSRGMRSSTRTMXXXXXXXXXL 973
+ILSDRA+KK D+SL K+ R + + SPP S MR+S R+ L
Sbjct: 129 MILSDRASKKDDKSLLGKIASKREKGKAIMTGKQSPPLSSSRMRASARSADRSAKNVA-L 187
Query: 974 NEIRAKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSH 1153
NE+RAK R +QQDPE + +LR+A+ +A+ SS + +S SH
Sbjct: 188 NELRAK---RLKQQDPEARRRLREASRNSGPRRFSPPKRKSFTSANLSSSSHSDSDSRSH 244
Query: 1154 SNEGXXXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFV 1333
S++ + S+ P+F+DIKEI+IRRSKLAKWFMEPFF+ELIVGCFV
Sbjct: 245 SDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVGCFV 304
Query: 1334 RVGIGRSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVS 1513
RVGIGRS++GPIYRLCMV+NVD+SDP+RQYKLEN+TT KYLNVVWGNESSAARWQMAMVS
Sbjct: 305 RVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENRTTHKYLNVVWGNESSAARWQMAMVS 364
Query: 1514 DSAPLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
DS PL +EF QWV+EVERSGGRMP+KQDV ++
Sbjct: 365 DSFPLEEEFKQWVKEVERSGGRMPTKQDVLEK 396
>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
gi|550327599|gb|EEE97240.2| plus-3 domain-containing
family protein [Populus trichocarpa]
Length = 664
Score = 335 bits (860), Expect = 3e-89
Identities = 192/392 (48%), Positives = 239/392 (60%), Gaps = 10/392 (2%)
Frame = +2
Query: 464 AAGRTNTGGRNRP--PQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKKR 637
AAGRT GRNR P S RR + K SGSQVPLKKR
Sbjct: 11 AAGRTGKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRKPSGSQVPLKKR 70
Query: 638 LDPPEXXXXXXXXXXXXXXXXXXXXXX--SDDDSIGSDLYKDDDDRQKLAEMTELQREII 811
L+ E SD IG DLYKD+DDRQKLA+M+EL RE+I
Sbjct: 71 LETNERDDEGGSQEEGDYDDGGSDREGESSDGSDIGDDLYKDEDDRQKLAQMSELDRELI 130
Query: 812 LSDRAAKKSDRSLRDKMI--KDRNPP---RKQSSPPSHSRGMRSSTRTMXXXXXXXXXLN 976
L+DRA KK D+ L +K+ +D + P RK++ P SRG+RSS R+ LN
Sbjct: 131 LADRADKKGDKHLTEKIRSKRDNDKPTRSRKETPPLPSSRGVRSSARSADRAAAKDDALN 190
Query: 977 EIRAKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHS 1156
E+RAK R +QQDPE KLRDA+ FT++ L SS + ES S S
Sbjct: 191 ELRAK---RLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARLSSSSSESESGSRS 247
Query: 1157 NEGXXXXXXXXXXXXXXKES-PESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFV 1333
+ ++ P S+ PT+EDIKEI+IRR+KLAKWFMEP+F+ELI+GCFV
Sbjct: 248 HSEDEGSTGDGGMADSDEDGDPGSRGPTYEDIKEITIRRTKLAKWFMEPWFEELIIGCFV 307
Query: 1334 RVGIGRSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVS 1513
RVGIGRS++GP+YRLCMVRNVDA++P++ YKLENK+T KYLNV WG +SSAARWQMAMVS
Sbjct: 308 RVGIGRSKTGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADSSAARWQMAMVS 367
Query: 1514 DSAPLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
DSAP +E+ QWVRE ER GGR+PSKQD+ ++
Sbjct: 368 DSAPTEEEYKQWVREAERGGGRLPSKQDILEK 399
>ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 619
Score = 330 bits (847), Expect = 8e-88
Identities = 193/389 (49%), Positives = 238/389 (61%), Gaps = 7/389 (1%)
Frame = +2
Query: 464 AAGRTNTGGRNRPPQSS-RRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKKRL 640
AAGRT++G ++R SS +R K SGSQVPLKKRL
Sbjct: 11 AAGRTSSGRKSRHSHSSSKRRRDDSYSDGGSDSRGDDSDDGRGYASRKPSGSQVPLKKRL 70
Query: 641 DPPEXXXXXXXXXXXXXXXXXXXXXXSDDDS-IGSDLYKDDDDRQKLAEMTELQREIILS 817
DP E ++S +GSDLYKD+DDR+KLAEM+ELQRE+ILS
Sbjct: 71 DPSEVDDERDSQDEGDYNDSGSDRGGESNESDVGSDLYKDEDDRRKLAEMSELQRELILS 130
Query: 818 DRAAKKSDRSLRDKMI----KDRNPPRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLNEIR 985
DRA KK D+SL++K K + ++ +PP S +RSS R+ LNE+R
Sbjct: 131 DRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPLPSSRVRSSARSADRAAAKDDALNELR 190
Query: 986 AKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHSNEG 1165
AK R +QQDPE KLRD + F+A SS +SDS S
Sbjct: 191 AK---RLKQQDPEAHRKLRDVSRGSVGSKNFSHTIKKSFSAVRRSSS---SQSDSESRSH 244
Query: 1166 XXXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGI 1345
+ +Q TFEDIKEI+IRRS+LAKW MEPFF+ELIVGCFVRVGI
Sbjct: 245 SDDEGSSADDAIDSDDERGNQGLTFEDIKEITIRRSRLAKWLMEPFFEELIVGCFVRVGI 304
Query: 1346 GRSRSG-PIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSDSA 1522
G+++SG PIYRLC VRNVD+SDP+RQYKLENKTT KYLNVVWGNE+SAARWQMAMVSDS
Sbjct: 305 GKTKSGRPIYRLCSVRNVDSSDPDRQYKLENKTTHKYLNVVWGNENSAARWQMAMVSDSL 364
Query: 1523 PLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
PL +E+DQWVREVE++GGR+PSK+DV ++
Sbjct: 365 PLEEEYDQWVREVEKNGGRLPSKEDVLEK 393
>ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana]
gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein;
78902-80833 [Arabidopsis thaliana]
gi|332195649|gb|AEE33770.1| Paf1C-like transcription
factor [Arabidopsis thaliana]
Length = 643
Score = 330 bits (846), Expect = 1e-87
Identities = 187/387 (48%), Positives = 235/387 (60%), Gaps = 5/387 (1%)
Frame = +2
Query: 464 AAGRTNTGGRNRPPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKKRLD 643
AAGRTN+ GR+R P SSRR + K SGSQVPLKKRL+
Sbjct: 11 AAGRTNSAGRSRHPPSSRR--REGSYSDGSSDSRDDSDEDRGYASRKPSGSQVPLKKRLE 68
Query: 644 PPEXXXXXXXXXXXXXXXXXXXXXXSDDDSIGSDLYKDDDDRQKLAEMTELQREIILSDR 823
S++ G DLYK+++DRQKLA MTE QRE+ILS+R
Sbjct: 69 AEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMTEFQREMILSER 128
Query: 824 AAKKSDRS----LRDKMIKDRNP-PRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLNEIRA 988
A KK D++ LR K ++ P +K++ P SRG+RSS R+ LNE+RA
Sbjct: 129 ADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRAAAKDDALNELRA 188
Query: 989 KQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHSNEGX 1168
K R +QQDP KLRDA+ +S L SS ++ +SDS S
Sbjct: 189 K---RMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSS-SQSDSDSRSQSDD 244
Query: 1169 XXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIG 1348
+ S +PTFED+KE++IRRSKLAKW MEPFF+ELIVGCFVRVGIG
Sbjct: 245 EGSNGGMLD----SDDDRSDVPTFEDVKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIG 300
Query: 1349 RSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSDSAPL 1528
RS+SGPIYRLC V+NVDA+DP++ YKLENKTT KYLNVVWGNE+SAARWQMAM+SD PL
Sbjct: 301 RSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAMISDGHPL 360
Query: 1529 RDEFDQWVREVERSGGRMPSKQDVFDQ 1609
+E+ QW+REVER+ GRMP+KQD+ ++
Sbjct: 361 EEEYRQWIREVERTNGRMPTKQDISEK 387
>ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata]
gi|297333952|gb|EFH64370.1| At1g61040/T7P1_17
[Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 329 bits (844), Expect = 2e-87
Identities = 187/387 (48%), Positives = 235/387 (60%), Gaps = 5/387 (1%)
Frame = +2
Query: 464 AAGRTNTGGRNRPPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKKRLD 643
AAGRTN+ GR+R P SSRR + K SGSQVPLKKRL+
Sbjct: 11 AAGRTNSAGRSRHPPSSRR--REGSYSDGSSDSRDDSDEDRGYASRKPSGSQVPLKKRLE 68
Query: 644 PPEXXXXXXXXXXXXXXXXXXXXXXSDDDSIGSDLYKDDDDRQKLAEMTELQREIILSDR 823
S++ G DLYK+++DRQKLA MTE QRE+IL++R
Sbjct: 69 AEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMTEFQREMILAER 128
Query: 824 AAKKSDRS----LRDKMIKDRNP-PRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLNEIRA 988
A KK D++ LR K ++ P +K++ P SRG+RSS R+ LNE+RA
Sbjct: 129 ADKKGDKNFTEKLRSKRENEKTPVSKKETQPLPASRGVRSSARSADRAAAKDDALNELRA 188
Query: 989 KQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHSNEGX 1168
K R +QQDP KLRDA+ +S L SS ++ +SDS S
Sbjct: 189 K---RMKQQDPAALRKLRDASKGGSGSRDFSSMKRKPLASSNLSSS-SQSDSDSRSQSDD 244
Query: 1169 XXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIG 1348
+ S +PTFED+KEI+IRRSKLAKW MEPFF+ELIVGCFVRVGIG
Sbjct: 245 EGSNAGMLD----SDDDRSDVPTFEDVKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIG 300
Query: 1349 RSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSDSAPL 1528
RS+SGPIYRLC V+NVDA+DP++ YKLENKTT KYLNVVWGNE+SAARWQMAM+SD PL
Sbjct: 301 RSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAMISDGHPL 360
Query: 1529 RDEFDQWVREVERSGGRMPSKQDVFDQ 1609
+E+ QW+REVER+ GRMP+KQD+ ++
Sbjct: 361 EEEYRQWIREVERTNGRMPTKQDISEK 387
>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
gi|222848649|gb|EEE86196.1| plus-3 domain-containing
family protein [Populus trichocarpa]
Length = 662
Score = 329 bits (843), Expect = 2e-87
Identities = 189/391 (48%), Positives = 237/391 (60%), Gaps = 9/391 (2%)
Frame = +2
Query: 464 AAGRTNTGGRNRPP--QSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKKR 637
AAGRT GRNR S RR + K SGSQVPLKKR
Sbjct: 11 AAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKPSGSQVPLKKR 70
Query: 638 LDPPEXXXXXXXXXXXXXXXXXXXXXX--SDDDSIGSDLYKDDDDRQKLAEMTELQREII 811
L+ E SD+ IG DLYKD+DDR+KLA+M+EL RE+I
Sbjct: 71 LETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLAQMSELDRELI 130
Query: 812 LSDRAAKKSDRSLRDK--MIKDRNPP---RKQSSPPSHSRGMRSSTRTMXXXXXXXXXLN 976
L+DRA KK D+ L +K + +D + P RK++ P SRG+RSS R+ LN
Sbjct: 131 LADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSSRGVRSSARSADRAAAKDDALN 190
Query: 977 EIRAKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHS 1156
E+RAK R +QQDPE KLRD + FT+++L SS + S SHS
Sbjct: 191 ELRAK---RLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSSSSSESGSRSHS 247
Query: 1157 NEGXXXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVR 1336
+ E P S+ PT+EDIKEI+IRR+KLAKWFMEP+F+ELI+GCFVR
Sbjct: 248 EDEGSTGDGGMADSDEDVE-PGSKGPTYEDIKEITIRRTKLAKWFMEPWFEELIIGCFVR 306
Query: 1337 VGIGRSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSD 1516
VGIGRS+SGP+YRLCMVRNVDA++P++ YKLENK+T KYLNV WG ++SAARWQMAMVSD
Sbjct: 307 VGIGRSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSAARWQMAMVSD 366
Query: 1517 SAPLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
S P +E+ QWVREVE GGR+PSKQD+ ++
Sbjct: 367 SGPTEEEYKQWVREVECGGGRLPSKQDILEK 397
>gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]
Length = 643
Score = 328 bits (840), Expect = 5e-87
Identities = 186/387 (48%), Positives = 234/387 (60%), Gaps = 5/387 (1%)
Frame = +2
Query: 464 AAGRTNTGGRNRPPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKKRLD 643
AAGRTN+ GR+ P SSRR + K SGSQVPLKKRL+
Sbjct: 11 AAGRTNSAGRSSHPPSSRR--REGSYSDGSSDSRDDSDEDRGYASRKPSGSQVPLKKRLE 68
Query: 644 PPEXXXXXXXXXXXXXXXXXXXXXXSDDDSIGSDLYKDDDDRQKLAEMTELQREIILSDR 823
S++ G DLYK+++DRQKLA MTE QRE+ILS+R
Sbjct: 69 AEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMTEFQREMILSER 128
Query: 824 AAKKSDRS----LRDKMIKDRNP-PRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLNEIRA 988
A KK D++ LR K ++ P +K++ P SRG+RSS R+ LNE+RA
Sbjct: 129 ADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRAAAKDDALNELRA 188
Query: 989 KQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHSNEGX 1168
K R +QQDP KLRDA+ +S L SS ++ +SDS S
Sbjct: 189 K---RMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSS-SQSDSDSRSQSDD 244
Query: 1169 XXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIG 1348
+ S +PTFED+KE++IRRSKLAKW MEPFF+ELIVGCFVRVGIG
Sbjct: 245 EGSNGGMLD----SDDDRSDVPTFEDVKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIG 300
Query: 1349 RSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSDSAPL 1528
RS+SGPIYRLC V+NVDA+DP++ YKLENKTT KYLNVVWGNE+SAARWQMAM+SD PL
Sbjct: 301 RSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAMISDGHPL 360
Query: 1529 RDEFDQWVREVERSGGRMPSKQDVFDQ 1609
+E+ QW+REVER+ GRMP+KQD+ ++
Sbjct: 361 EEEYRQWIREVERTNGRMPTKQDISEK 387
>ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Capsella rubella]
gi|482569554|gb|EOA33742.1| hypothetical protein
CARUB_v10019938mg [Capsella rubella]
Length = 644
Score = 326 bits (835), Expect = 2e-86
Identities = 187/390 (47%), Positives = 234/390 (60%), Gaps = 8/390 (2%)
Frame = +2
Query: 464 AAGRTNTGGRNR---PPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKK 634
AAGRTN G++R PP S RR K SGSQVPLKK
Sbjct: 11 AAGRTNPAGKSRHSHPPSSRRREGSYSDGSSDSRDDSDDDRGFASR---KPSGSQVPLKK 67
Query: 635 RLDPPEXXXXXXXXXXXXXXXXXXXXXXSDDDSIGSDLYKDDDDRQKLAEMTELQREIIL 814
RL+ S++ G DLYK+++DRQKLA MTE QRE+IL
Sbjct: 68 RLEAEREDRAARNESGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMTEFQREMIL 127
Query: 815 SDRAAKKSDRS----LRDKMIKDRNP-PRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLNE 979
++RA KK D++ LR K ++ P +K++ P SRG+RSS R+ LNE
Sbjct: 128 AERADKKGDKNFTEKLRSKRENEKTPVSKKETQPLPASRGVRSSARSADRAAAKDDALNE 187
Query: 980 IRAKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHSN 1159
+RAK R +QQDP KLRDA+ +S L +S ++ +SDS S
Sbjct: 188 LRAK---RMKQQDPAALRKLRDASKGGSGSRDFSSLKRKPLASSNLSNS-SQSDSDSRSQ 243
Query: 1160 EGXXXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRV 1339
+ S +PTFEDIKEI+IRRSKLAKW MEPFF+ELIVGCFVRV
Sbjct: 244 SDDEGSNAGLD-----SDDDRSDMPTFEDIKEITIRRSKLAKWLMEPFFEELIVGCFVRV 298
Query: 1340 GIGRSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSDS 1519
GIGRS+SGPIYRLCMVRNVDA+DP++ YKLENKTT KYLNV+WGNE+SAARWQMAM+SD
Sbjct: 299 GIGRSKSGPIYRLCMVRNVDATDPDKTYKLENKTTHKYLNVIWGNETSAARWQMAMISDG 358
Query: 1520 APLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
PL +E+ QW+REVER+ GRMP+KQD+ ++
Sbjct: 359 HPLEEEYRQWIREVERTNGRMPTKQDISEK 388
>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 657
Score = 322 bits (826), Expect = 2e-85
Identities = 190/389 (48%), Positives = 236/389 (60%), Gaps = 7/389 (1%)
Frame = +2
Query: 464 AAGRTNTGGRNRPPQSS-RRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKKRL 640
AAGRT++G ++R SS +R K SGSQVPLKKRL
Sbjct: 11 AAGRTSSGRKSRHSHSSSKRRRDDSYSDGGSDSRGDDSDDGRGYASRKPSGSQVPLKKRL 70
Query: 641 DPPEXXXXXXXXXXXXXXXXXXXXXXSDDDS-IGSDLYKDDDDRQKLAEMTELQREIILS 817
DP E ++S +GSDLYKD++DR+KLAEM+ELQRE+ILS
Sbjct: 71 DPSEVGDEHDSQDEGDYNDSGSDRGGESNESDVGSDLYKDENDRRKLAEMSELQRELILS 130
Query: 818 DRAAKKSDRSLRDKMI----KDRNPPRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLNEIR 985
DRA KK D+SL++K K + ++ +PP S +RSS R+ LNE+R
Sbjct: 131 DRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPLPSSRVRSSARSADRAAAKDDALNELR 190
Query: 986 AKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHSNEG 1165
AK R +QQDPE KLRD + F+A SS +SDS S
Sbjct: 191 AK---RLKQQDPEAHRKLRDVSRGSVGSKNFSHTIKKSFSAVRRSSS---SQSDSESRSH 244
Query: 1166 XXXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGI 1345
+ +Q TFEDIKEI+IRRS+LAKW MEPFF+ELIVGC VRVGI
Sbjct: 245 SDDDGSSADDAIDSDDERGNQGLTFEDIKEITIRRSRLAKWLMEPFFEELIVGCCVRVGI 304
Query: 1346 GRSRSG-PIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSDSA 1522
G+++SG PIYRLC V NVD+SDP+RQYKLENKTT KYLNVVWGNE+SAARWQMAMVSDS
Sbjct: 305 GKTKSGRPIYRLCSVCNVDSSDPDRQYKLENKTTHKYLNVVWGNENSAARWQMAMVSDSL 364
Query: 1523 PLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
PL +E+DQWVREVE++GGR+PSK+DV ++
Sbjct: 365 PLEEEYDQWVREVEKNGGRLPSKEDVLEK 393
>ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutrema salsugineum]
gi|557088572|gb|ESQ29352.1| hypothetical protein
EUTSA_v10023338mg [Eutrema salsugineum]
Length = 644
Score = 320 bits (821), Expect = 9e-85
Identities = 184/390 (47%), Positives = 234/390 (60%), Gaps = 8/390 (2%)
Frame = +2
Query: 464 AAGRTNTGGRNR---PPQSSRRHHKXXXXXXXXXXXXXXXXXXXXXXXXKLSGSQVPLKK 634
AAGRTN GR+R PP S RR K SGSQVPLKK
Sbjct: 11 AAGRTNAPGRSRHSHPPSSRRREGSYSDGGSDSRDDSDEERGYASR---KPSGSQVPLKK 67
Query: 635 RLDPPEXXXXXXXXXXXXXXXXXXXXXXSDDDSIGSDLYKDDDDRQKLAEMTELQREIIL 814
RL+ S++ G DLYK+++DRQKLA MTE QRE+IL
Sbjct: 68 RLEAEREDRAARDEAGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMTEFQREMIL 127
Query: 815 SDRAAKKSDRS----LRDKMIKDRNP-PRKQSSPPSHSRGMRSSTRTMXXXXXXXXXLNE 979
++RA KK D++ LR K K++ P +K++ P SRG+RSS R+ LNE
Sbjct: 128 AERADKKGDKNFTEKLRSKREKEKTPVSKKETQPLPASRGVRSSARSADRAAAKDDALNE 187
Query: 980 IRAKQAKRARQQDPEGQWKLRDAAXXXXXXXXXXXXXXXXFTASTLGSSPTRGESDSHSN 1159
+RAK R +QQ+P KLRDA+ +S L +S ++ +SDS S
Sbjct: 188 LRAK---RMKQQEPASLRKLRDASKGGSGSRDFSSMKRKPLASSNLSNS-SQSDSDSRSQ 243
Query: 1160 EGXXXXXXXXXXXXXXKESPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRV 1339
+ S +PTFEDIK+I+IRRSKLAKW MEPFF+ELIVGCFVRV
Sbjct: 244 SDDEGSNGGMVD----SDDDRSDVPTFEDIKDITIRRSKLAKWLMEPFFEELIVGCFVRV 299
Query: 1340 GIGRSRSGPIYRLCMVRNVDASDPNRQYKLENKTTSKYLNVVWGNESSAARWQMAMVSDS 1519
GIGRS++GPIYRLCMV+NVDA+DP++ YKLENKTT KYLN +WG+ESSAARWQMAM+SD
Sbjct: 300 GIGRSKNGPIYRLCMVKNVDATDPDKTYKLENKTTHKYLNCIWGHESSAARWQMAMISDG 359
Query: 1520 APLRDEFDQWVREVERSGGRMPSKQDVFDQ 1609
PL +E+ QW+REVER+ GRMP+KQD+ ++
Sbjct: 360 YPLEEEYRQWIREVERTNGRMPTKQDISEK 389