BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00015685
         (961 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group] gi...   129   2e-35
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]   140   7e-31
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     139   1e-30
ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752...   137   5e-30
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              137   6e-30
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         137   8e-30
emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]   137   8e-30
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   136   1e-29
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   136   1e-29
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...   136   1e-29
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   136   1e-29
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-...   136   1e-29
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   135   2e-29
ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772...   134   4e-29
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]             134   4e-29
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]        133   9e-29
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]                130   6e-28
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]        130   6e-28
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   130   7e-28
emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]        129   2e-27

>emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group]
            gi|38345441|emb|CAE03293.2| OSJNBb0046P18.9 [Oryza sativa
            Japonica Group]
          Length = 1134

 Score =  129 bits (325), Expect(2) = 2e-35
 Identities = 79/190 (41%), Positives = 111/190 (58%), Gaps = 7/190 (3%)
 Frame = -2

Query: 549  NSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMCLIIEPSTR*Q*IIAI 370
            N ++TKEIQ  V ELL+K  +RES+SPCA+PVILVPKKD  WRMC+           I I
Sbjct: 910  NPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINN----ITI 965

Query: 369  PYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG------IQDQI*SI*MVVMP 208
             Y   +  L + M+D      +     ++SG +    + G       + +      +VMP
Sbjct: 966  RYRHPIPRLDD-MLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMP 1024

Query: 207  FGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVNHLKCIFEVLRQE*FY 31
            FG+TNA +  +  MN V++ FI KFV+VYFD+IL+YSK+M E  NHL+ +F  LR    +
Sbjct: 1025 FGLTNAPNTFMRLMNEVLRPFIEKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLF 1084

Query: 30   ANVAKCSFCI 1
             N+ KC+FCI
Sbjct: 1085 GNLEKCTFCI 1094



 Score = 47.0 bits (110), Expect(2) = 2e-35
 Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
 Frame = -3

Query: 686  SISSLLQDY-DVFPSQLLKGLPPLRKIEHQIDFILVFQLPNKPVYK 552
            +I+++LQ+Y DVFP ++  GL P+  IEHQID IL   LPN+  Y+
Sbjct: 863  AIANILQEYSDVFPKEVPPGLLPVHGIEHQIDLILGASLPNRAPYR 908


>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
          Length = 960

 Score =  140 bits (353), Expect = 7e-31
 Identities = 83/203 (40%), Positives = 122/203 (60%), Gaps = 7/203 (3%)
 Frame = -2

Query: 588 PGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMCLI 409
           PG  I  + +  +N ++TKE+Q  V+ELL K  +RESM PCA+ V+LVPKKD  WRMC+ 
Sbjct: 194 PGATIPNRLAYRSNLEETKELQRQVEELLTKGHVRESMRPCAILVLLVPKKDGTWRMCVD 253

Query: 408 IEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG------I 247
                     I + Y   +  L + M+D      +     +KSG +    + G       
Sbjct: 254 CRAINN----ITVKYRHPIPRLDD-MLDELHGSCVFIKIDLKSGYHQIRMKEGDEWKTAF 308

Query: 246 QDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVNHL 70
           + +      +VMPFG+TNA S  +  MN+V+++FIG+FV+VYFD+ILVYSK ++E +NHL
Sbjct: 309 KTKYGLYEWLVMPFGLTNALSTFMRLMNHVLRAFIGRFVVVYFDDILVYSKNLDEHINHL 368

Query: 69  KCIFEVLRQE*FYANVAKCSFCI 1
            C+  +LR+E  YAN+ KCSFC+
Sbjct: 369 HCVLAILRKEKLYANLKKCSFCM 391


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  139 bits (351), Expect = 1e-30
 Identities = 84/204 (41%), Positives = 122/204 (59%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  + +   N ++TKEIQ  V  LL+K  +RES+SPCA+PVILVPKKD  WRMC
Sbjct: 715  LIPGATLPNRPAYRTNPEETKEIQRQVQALLDKGYVRESLSPCAVPVILVPKKDGSWRMC 774

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
            +           I + Y   +  L + M+D      I     ++SG +    + G     
Sbjct: 775  VDCRAINN----ITVRYRHPIPRLDD-MLDELSGSMIFSKIDLRSGFHQIRMKIGDEWKT 829

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMPFG+TNA S  +  MN+V+++FIGKFV+VYFD+IL+YSKT+ E V 
Sbjct: 830  AFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKTLEEHVA 889

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            H++ + +VLR+E  YAN+ KC+FC
Sbjct: 890  HIQQVLDVLRKEQLYANLEKCTFC 913



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = -3

Query: 728 DYSLHTNELTPFSRSISSLLQDY-DVFPSQLLKGLPPLRKIEHQIDFILVFQLPNKPVYK 552
           D  L  N+LT     ++ +LQ+Y DVFP +   GLPPLR IEHQID I    LPN+P Y+
Sbjct: 669 DTLLSANDLTSVPSVVARVLQEYEDVFPEETPVGLPPLRGIEHQIDLIPGATLPNRPAYR 728


>ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752491 [Setaria italica]
          Length = 1295

 Score =  137 bits (346), Expect = 5e-30
 Identities = 81/204 (39%), Positives = 122/204 (59%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  + +   N ++TKEIQ  V ELL+K  +RES+SPCA+PV+LVPKKD  WRMC
Sbjct: 781  LVPGASLPNRPAYRTNPEETKEIQQQVKELLDKGYVRESLSPCAVPVLLVPKKDGSWRMC 840

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
            +           I + Y   +  L + M+D      I     ++SG +    + G     
Sbjct: 841  VDCRAINA----ITVRYRHPIPRLDD-MLDELSGSTIFTKIDLRSGYHQIRMKIGDEWKT 895

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMPFG+TNA S  +  MN+V+++FIGKFV+VYFD+IL+YSK+ +E ++
Sbjct: 896  AFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKSFDEHLD 955

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            H++ +  VLR +  Y N+AKC+FC
Sbjct: 956  HIRQVLSVLRDDKLYGNIAKCTFC 979


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  137 bits (345), Expect = 6e-30
 Identities = 86/207 (41%), Positives = 122/207 (58%), Gaps = 13/207 (6%)
 Frame = -2

Query: 588  PGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMCLI 409
            PG  +  + +   N  +TKE++  V EL+E+  +RESMSPCA+PV+LVPKKD  WRMC+ 
Sbjct: 906  PGASLPNRPAYRTNPVETKELEKQVTELMERGHIRESMSPCAVPVLLVPKKDGSWRMCVD 965

Query: 408  IEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NP-KMSEN------- 253
                      I + Y   +  L + M+D      I     +KSG +  +M E        
Sbjct: 966  CRAINN----ITVKYRHPIPRLDD-MLDELHGSSIFSKVDLKSGYHQIRMKEGDEWKTAF 1020

Query: 252  ----GIQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMN 88
                G+ + +      VMPFG+TNA S  +  MN+V+++FIG+FVIVYFD+ILVYSK++ 
Sbjct: 1021 KTIQGLYEWL------VMPFGLTNAPSTFMRLMNHVLRAFIGRFVIVYFDDILVYSKSLE 1074

Query: 87   ELVNHLKCIFEVLRQE*FYANVAKCSF 7
            E V HLK + EVLR+E  YAN+ KC+F
Sbjct: 1075 EHVEHLKMVLEVLRKEKLYANLKKCTF 1101


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  137 bits (344), Expect = 8e-30
 Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  +     N ++TKEIQ  V ELL+K  +RES+SPCA+PVILVPKKD  WRMC
Sbjct: 715  LIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCAVPVILVPKKDGTWRMC 774

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
            +           I I Y   +  L + M+D      +     ++SG +    + G     
Sbjct: 775  VDCRAINN----ITIRYRHPIPRLDD-MLDELSGAIVFSKVDLRSGYHQIRMKLGDEWKT 829

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMPFG+TNA S  +  MN V+++FIGKFV+VYFD+IL+YSK+M+E V+
Sbjct: 830  AFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGKFVVVYFDDILIYSKSMDEHVD 889

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            H++ +F  LR    + N+ KC+FC
Sbjct: 890  HMRAVFNALRDARLFGNLEKCTFC 913


>emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]
          Length = 771

 Score =  137 bits (344), Expect = 8e-30
 Identities = 81/203 (39%), Positives = 119/203 (58%), Gaps = 7/203 (3%)
 Frame = -2

Query: 588 PGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMCLI 409
           PG  I  + +   N ++TKE+Q  V+ELL K  +RES+SPC + V+LVP KD  WRMC+ 
Sbjct: 101 PGATIPNRPAYRGNPEETKELQRQVEELLTKGHVRESLSPCVVLVLLVPNKDGTWRMCVD 160

Query: 408 IEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG------I 247
                     I + Y   +  L + M+D      +     +KSG +    + G       
Sbjct: 161 CRAINN----IMVKYRHPIPRLDD-MLDELHGSCVFTKIDLKSGYHQIRMKEGDEWKTTF 215

Query: 246 QDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVNHL 70
           + +      +VMPFG+TNA S  +  MN+ ++SFIG+FV+VYFD+ILVYSK ++E +NHL
Sbjct: 216 KTKYGLYEWLVMPFGLTNAPSTFMRLMNHALRSFIGRFVVVYFDDILVYSKNLDEHINHL 275

Query: 69  KCIFEVLRQE*FYANVAKCSFCI 1
            C+ +VLR+   YAN+ KCSFC+
Sbjct: 276 HCVLDVLRKXKLYANLKKCSFCM 298


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  136 bits (343), Expect = 1e-29
 Identities = 84/221 (38%), Positives = 127/221 (57%), Gaps = 7/221 (3%)
 Frame = -2

Query: 642  TSKGIASLKEN*ASN*LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCA 463
            T KG+  L+         PG  +  + +  +N ++TKE+Q  V+ELL K  +RESMSPC+
Sbjct: 679  TPKGLPPLRGIEHQIDFVPGSQLPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCS 738

Query: 462  MPVILVPKKDRMWRMCLIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIK 283
            +PV+LVPKKD  WRMC+      +    I + Y   +  L + M+D      I     +K
Sbjct: 739  VPVLLVPKKDGTWRMCVDCRAINK----ITVKYRHPIPRLDD-MLDQLCGSKIFSKIDLK 793

Query: 282  SG*NPKMSENG------IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVY 124
            SG +      G       + +      +VMPFG+TNA S  +  MN+V K F GKF++VY
Sbjct: 794  SGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVY 853

Query: 123  FDNILVYSKTMNELVNHLKCIFEVLRQE*FYANVAKCSFCI 1
            FD+IL++S+ ++E + HLK +FEVLR +  +AN+ KC+FC+
Sbjct: 854  FDDILIFSQNLDEHLEHLKKVFEVLRNQRLFANLKKCTFCV 894



 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
 Frame = -3

Query: 719 LHTNELTP-FSRSISSLLQDY-DVFPSQLLKGLPPLRKIEHQIDFILVFQLPNKPVYK 552
           ++  +LTP    S+SSLLQ++ DVFP    KGLPPLR IEHQIDF+   QLPN+P Y+
Sbjct: 651 INFEQLTPSLPNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGSQLPNRPAYR 708


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  136 bits (343), Expect = 1e-29
 Identities = 84/221 (38%), Positives = 127/221 (57%), Gaps = 7/221 (3%)
 Frame = -2

Query: 642  TSKGIASLKEN*ASN*LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCA 463
            T KG+  L+         PG  +  + +  +N ++TKE+Q  V+ELL K  +RESMSPC+
Sbjct: 679  TPKGLPPLRGIEHQIDFVPGSQLPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCS 738

Query: 462  MPVILVPKKDRMWRMCLIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIK 283
            +PV+LVPKKD  WRMC+      +    I + Y   +  L + M+D      I     +K
Sbjct: 739  VPVLLVPKKDGTWRMCVDCRAINK----ITVKYRHPIPRLDD-MLDQLCGSKIFSKIDLK 793

Query: 282  SG*NPKMSENG------IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVY 124
            SG +      G       + +      +VMPFG+TNA S  +  MN+V K F GKF++VY
Sbjct: 794  SGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVY 853

Query: 123  FDNILVYSKTMNELVNHLKCIFEVLRQE*FYANVAKCSFCI 1
            FD+IL++S+ ++E + HLK +FEVLR +  +AN+ KC+FC+
Sbjct: 854  FDDILIFSQNLDEHLEHLKKVFEVLRNQRLFANLKKCTFCV 894



 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
 Frame = -3

Query: 719 LHTNELTP-FSRSISSLLQDY-DVFPSQLLKGLPPLRKIEHQIDFILVFQLPNKPVYK 552
           ++  +LTP    S+SSLLQ++ DVFP    KGLPPLR IEHQIDF+   QLPN+P Y+
Sbjct: 651 INFEQLTPSLPNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGSQLPNRPAYR 708


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score =  136 bits (342), Expect = 1e-29
 Identities = 83/204 (40%), Positives = 116/204 (56%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  +     N ++TKEIQ  V ELL+K  +RES+SPCA+PVILVPKKD  WRMC
Sbjct: 1045 LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMC 1104

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
            +           I I Y   +  L + M+D      +     ++SG +    + G     
Sbjct: 1105 VDCRAINN----ITIRYRHPIPRLDD-MLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKT 1159

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMPFG+TNA S  +  MN V++ FIGKFV+VYFD+IL+YSK+M E  N
Sbjct: 1160 TFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 1219

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            HL+ +F  LR    + N+ KC+FC
Sbjct: 1220 HLRAVFNALRDARLFGNLEKCTFC 1243


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  136 bits (342), Expect = 1e-29
 Identities = 83/204 (40%), Positives = 116/204 (56%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  +     N ++TKEIQ  V ELL+K  +RES+SPCA+PVILVPKKD  WRMC
Sbjct: 712  LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMC 771

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
            +           I I Y   +  L + M+D      +     ++SG +    + G     
Sbjct: 772  VDCRAINN----ITIRYRHPIPRLDD-MLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKT 826

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMPFG+TNA S  +  MN V++ FIGKFV+VYFD+IL+YSK+M E  N
Sbjct: 827  AFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 886

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            HL+ +F  LR    + N+ KC+FC
Sbjct: 887  HLRAVFNALRDARLFGNLEKCTFC 910



 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
 Frame = -2

Query: 216  VMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVNHLKCIFEVLRQE 40
            VM FG+TNA +  ++ MN V   ++ KFV+V+ D+ILVYS++  +  +HL+ +   LR+ 
Sbjct: 1631 VMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVLGKLREH 1690

Query: 39   *FYANVAKCSF 7
              YA ++KC F
Sbjct: 1691 QLYAKLSKCEF 1701


>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108864301|gb|ABA93040.2|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1748

 Score =  136 bits (342), Expect = 1e-29
 Identities = 83/204 (40%), Positives = 116/204 (56%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  +     N ++TKEIQ  V ELL+K  +RES+SPCA+PVILVPKKD  WRMC
Sbjct: 1054 LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMC 1113

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
            +           I I Y   +  L + M+D      +     ++SG +    + G     
Sbjct: 1114 VDCRAINN----ITIRYRHPIPRLDD-MLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKT 1168

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMPFG+TNA S  +  MN V++ FIGKFV+VYFD+IL+YSK+M E  N
Sbjct: 1169 TFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 1228

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            HL+ +F  LR    + N+ KC+FC
Sbjct: 1229 HLRAVFNALRDARLFGNLEKCTFC 1252


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  135 bits (341), Expect = 2e-29
 Identities = 83/204 (40%), Positives = 116/204 (56%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  +     N ++TKEIQ  V ELL+K  +RES+SPCA+PVILVPKKD  WRMC
Sbjct: 691  LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMC 750

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
            +           I I Y   +  L + M+D      +     ++SG +    + G     
Sbjct: 751  VDCRAINN----ITIRYRHPIPRLDD-MLDELSGSIVFSKVELRSGYHQIHMKLGDEWKT 805

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMPFG+TNA S  +  MN V++ FIGKFV+VYFD+IL+YSK+M E  N
Sbjct: 806  AFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 865

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            HL+ +F  LR    + N+ KC+FC
Sbjct: 866  HLRAVFNALRDARLFGNLEKCTFC 889


>ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772114 [Setaria italica]
          Length = 1246

 Score =  134 bits (338), Expect = 4e-29
 Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  + +   N ++TKEIQ  V ELL+K  +RES+SPCA+PV+LVPKKD  WRMC
Sbjct: 658  LVPGASLPNRPAYRTNPEETKEIQQQVKELLDKGYVRESLSPCAVPVLLVPKKDGSWRMC 717

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
            +           I + Y   +  L + M+D      I     ++SG +    + G     
Sbjct: 718  VDCRAINA----ITVRYRHPIPRLDD-MLDELSGSTIFTKIDLRSGYHQIRMKIGDEWKT 772

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMP G+TNA S  +  MN+V+++FIGKFV+VYFD+IL+YSK+ +E ++
Sbjct: 773  TFKTKFGLYEWLVMPSGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKSFDEHLD 832

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            H++ +  VLR +  Y N+AKC+FC
Sbjct: 833  HIRQVLSVLRDDKLYGNIAKCTFC 856


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score =  134 bits (338), Expect = 4e-29
 Identities = 81/204 (39%), Positives = 118/204 (57%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  + +  +N + T+EIQ  V EL+ K  +RES+SPCA+P+ILVPKKD  WRMC
Sbjct: 602  LNPGASLPNRPAYRSNPQQTQEIQRQVAELISKGWVRESLSPCAVPIILVPKKDGSWRMC 661

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
                  +     I I Y   +  L + ++D  F   +     +KSG +      G     
Sbjct: 662  TDCRAISN----ITIKYRHPIPRLDD-LLDELFGACLFSKIDLKSGYHQIRIREGDEWKT 716

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMPFG+TNA S  +  MN+V++ F+GKFV+VYFD+IL+YSK +++   
Sbjct: 717  AFKTKFGLYEWMVMPFGLTNAPSTFMRLMNHVLREFLGKFVVVYFDDILIYSKNLDDHCI 776

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            HLK + +VLR E  YAN+ KC FC
Sbjct: 777  HLKAVLQVLRYENLYANLEKCVFC 800


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score =  133 bits (335), Expect = 9e-29
 Identities = 82/204 (40%), Positives = 115/204 (56%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  +     N ++TKEIQ  V ELL+K  +RES+SPCA+PVILVPKKD  WRMC
Sbjct: 806  LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMC 865

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
            +             I Y   +  L + M+D      +     ++SG +    + G     
Sbjct: 866  VDCRAINN----NTIRYRHPIPRLDD-MLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKT 920

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMPFG+TNA S  +  MN V++ FIGKFV+VYFD+IL+YSK+M E  N
Sbjct: 921  TFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 980

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            HL+ +F  LR    + N+ KC+FC
Sbjct: 981  HLRAVFNALRDARLFGNLKKCTFC 1004


>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
          Length = 1667

 Score =  130 bits (328), Expect = 6e-28
 Identities = 81/204 (39%), Positives = 114/204 (55%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  +     N ++TKEIQ  V ELL+K  +RES+SPCA+ VILVPKKD  WRMC
Sbjct: 635  LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVLVILVPKKDGSWRMC 694

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
            +           I I Y   +  L + M+D      +     ++SG +      G     
Sbjct: 695  VDCRAINN----ITIRYRHPIPRLDD-MLDELSGSIVFSKVDLRSGYHQIRMNLGDEWKT 749

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMPFG+TNA +  +  MN V++ FIGKFV+VYFD+IL+YSK+M E  N
Sbjct: 750  AFKTKFGLYEWLVMPFGLTNAPTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 809

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            HL+ +F  LR    + N+ KC+FC
Sbjct: 810  HLRAVFNALRDARLFGNLEKCTFC 833


>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
          Length = 1667

 Score =  130 bits (328), Expect = 6e-28
 Identities = 81/204 (39%), Positives = 114/204 (55%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  +     N ++TKEIQ  V ELL+K  +RES+SPCA+ VILVPKKD  WRMC
Sbjct: 635  LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVLVILVPKKDGSWRMC 694

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
            +           I I Y   +  L + M+D      +     ++SG +      G     
Sbjct: 695  VDCRAINN----ITIRYRHPIPRLDD-MLDELSGSIVFSKVDLRSGYHQIRMNLGDEWKT 749

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMPFG+TNA +  +  MN V++ FIGKFV+VYFD+IL+YSK+M E  N
Sbjct: 750  AFKTKFGLYEWLVMPFGLTNAPTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 809

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            HL+ +F  LR    + N+ KC+FC
Sbjct: 810  HLRAVFNALRDARLFGNLEKCTFC 833


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  130 bits (327), Expect = 7e-28
 Identities = 77/204 (37%), Positives = 118/204 (57%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  +     N ++TKEIQ  V ELL+K  +RES+SPC++PV+LVPKKD  WRMC
Sbjct: 740  LIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSIPVLLVPKKDGSWRMC 799

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
            +           I I Y   +  L + M+D      +     ++SG +    + G     
Sbjct: 800  VDCRAINN----ITIRYRHPIPRLDD-MLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKT 854

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMPFG+TNA S  +  MN V+++FIG+FV+VYFD+IL+YS+++ +   
Sbjct: 855  AFKTKFGLYEWLVMPFGLTNAPSTFIRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHG 914

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            HL+ +F+ LR E  + N+ KC+FC
Sbjct: 915  HLRAVFDALRDERLFGNLEKCTFC 938


>emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]
          Length = 1239

 Score =  129 bits (323), Expect = 2e-27
 Identities = 77/204 (37%), Positives = 116/204 (56%), Gaps = 7/204 (3%)
 Frame = -2

Query: 594  LYPGIPIAKQTSL*ANSKDTKEIQSHVDELLEKRVMRESMSPCAMPVILVPKKDRMWRMC 415
            L PG  +  +     N ++TKEIQ  V ELL+K  +RES+SPCA+PV+LVPKKD  WRMC
Sbjct: 518  LIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMC 577

Query: 414  LIIEPSTR*Q*IIAIPYLILMTCLMN*MVDTSFQR*ILEVNTIKSG*NPKMSENG----- 250
            +           I I Y   +  L + M+D      +     ++SG +    + G     
Sbjct: 578  VDCRAINN----ITIRYRHPIPRLDD-MLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKT 632

Query: 249  -IQDQI*SI*MVVMPFGVTNARSA-LHFMNYVMKSFIGKFVIVYFDNILVYSKTMNELVN 76
              + +      +VMPFG+TNA S  +  MN V+++FIG+FV+VYFD IL+YS+++ +   
Sbjct: 633  AFKTKFSLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDGILIYSRSIEDHHG 692

Query: 75   HLKCIFEVLRQE*FYANVAKCSFC 4
            HL+ +F+ LR    + N+ KC+FC
Sbjct: 693  HLRAVFDALRDARLFGNLEKCTFC 716