BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00015680
         (1993 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006342101.1| PREDICTED: putative tRNA pseudouridine synth...   967   0.0  
ref|XP_004238405.1| PREDICTED: putative tRNA pseudouridine synth...   963   0.0  
gb|EOY15171.1| Pseudouridine synthase family protein, putative i...   595   e-167
emb|CBI18893.3| unnamed protein product [Vitis vinifera]              588   e-165
ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synth...   586   e-164
ref|XP_006435287.1| hypothetical protein CICLE_v10000742mg [Citr...   578   e-162
gb|EMJ23679.1| hypothetical protein PRUPE_ppa004049mg [Prunus pe...   573   e-161
ref|XP_006473742.1| PREDICTED: putative tRNA pseudouridine synth...   572   e-160
ref|XP_002510624.1| conserved hypothetical protein [Ricinus comm...   551   e-154
ref|XP_004499319.1| PREDICTED: putative tRNA pseudouridine synth...   543   e-151
gb|ESW32602.1| hypothetical protein PHAVU_001G001600g [Phaseolus...   534   e-149
ref|XP_002307763.2| hypothetical protein POPTR_0005s26880g [Popu...   532   e-148
gb|EXB88230.1| hypothetical protein L484_011660 [Morus notabilis]     529   e-147
ref|XP_004292924.1| PREDICTED: putative tRNA pseudouridine synth...   527   e-147
ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synth...   526   e-146
ref|XP_006416405.1| hypothetical protein EUTSA_v10007426mg [Eutr...   513   e-143
ref|XP_006307295.1| hypothetical protein CARUB_v10008914mg [Caps...   512   e-142
ref|XP_002893108.1| hypothetical protein ARALYDRAFT_889490 [Arab...   505   e-140
ref|NP_173466.2| Pseudouridine synthase family protein [Arabidop...   504   e-140
dbj|BAC43638.1| unknown protein [Arabidopsis thaliana] gi|290288...   499   e-138

>ref|XP_006342101.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Solanum
            tuberosum]
          Length = 560

 Score =  967 bits (2499), Expect = 0.0
 Identities = 495/571 (86%), Positives = 510/571 (89%), Gaps = 5/571 (0%)
 Frame = +3

Query: 102  MASEVAAAEVNAGKHLSSAAIADEEEKLRLLREAVNALPFNAVKDLWSIGACVRCIFRLF 281
            MA EVAAAEV   KHLSSA  A EEEKLRLLREAV+ALP NAVKDLWSIGACVRCIFRLF
Sbjct: 1    MAGEVAAAEVTGVKHLSSAEAAAEEEKLRLLREAVHALPVNAVKDLWSIGACVRCIFRLF 60

Query: 282  GLHELMCAHPSLSISKWCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSRETKFCKI 461
            GLHELMC+HPSLSISKWCDILED MRKK          DGEF NEQSHQERSRET FCKI
Sbjct: 61   GLHELMCSHPSLSISKWCDILEDVMRKK----------DGEF-NEQSHQERSRETNFCKI 109

Query: 462  CLGILQFLYNDDNGTSFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQAV 641
            CLGILQFLY DD GT  KKYSADDFA+VI+ELVKQQYQQIDSFSLEVSLP +VTENDQAV
Sbjct: 110  CLGILQFLYYDDTGTLLKKYSADDFAVVISELVKQQYQQIDSFSLEVSLPSSVTENDQAV 169

Query: 642  WLYMKNKYRHELWFQEKAECPFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSD 821
            WLYMKNK+RHELWFQEKAEC FISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSD
Sbjct: 170  WLYMKNKFRHELWFQEKAECQFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSD 229

Query: 822  ALTRDDVQEXXXXXXXXXXXXXX---DLKITGESVTPHVESSDSHI--GDGPTKVRPKES 986
            ALTRDDVQ+                 DLK TGESVTPHVESSD+HI  GDG TKV PKES
Sbjct: 230  ALTRDDVQDGNGGNKRRKTDKAGFTGDLKTTGESVTPHVESSDNHIVDGDGLTKVCPKES 289

Query: 987  QDLSCSYLMAQLDKVSKPCCLNIHCCRSSIYIGGRYLKYSRNVSQTRWVIDDERMGEASV 1166
            QDLSC+ LMAQLDKV KPCCL IHCCRSS YIGGRYLKYSRNVSQTRWVIDDERMGEASV
Sbjct: 290  QDLSCNNLMAQLDKVGKPCCLTIHCCRSSTYIGGRYLKYSRNVSQTRWVIDDERMGEASV 349

Query: 1167 EEIVGGTILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEGK 1346
            EEI+GG ILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIE K
Sbjct: 350  EEIIGGAILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIERK 409

Query: 1347 INSLESQYVRVKNLRAVGSQGWDLMREGESEKQKQYVALVWISRPVSDEDMQTISSLKEL 1526
            INSLES YVRVKNLRAVG QGWDLMREGE+EKQKQY ALVWISRPVSDED+QTISSLKEL
Sbjct: 410  INSLESHYVRVKNLRAVGIQGWDLMREGEAEKQKQYAALVWISRPVSDEDLQTISSLKEL 469

Query: 1527 KVAQKTPIRVLHRRSPLEREKIIHWMKVERISGSSQYLLLHLCTQAGTYIKEFVHGDFGR 1706
            KVAQKTPIRVLHRRSPLEREKIIHWM+ ER+SGSSQY LLHLCTQAGTYIKEFVHGDFGR
Sbjct: 470  KVAQKTPIRVLHRRSPLEREKIIHWMQAERVSGSSQYFLLHLCTQAGTYIKEFVHGDFGR 529

Query: 1707 TQPSIGSILGCRTEILQLDVTDVKMDCFQAD 1799
            TQPSIGSILGCRTEILQLDVTDVKMDCFQ +
Sbjct: 530  TQPSIGSILGCRTEILQLDVTDVKMDCFQEE 560


>ref|XP_004238405.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Solanum
            lycopersicum]
          Length = 557

 Score =  963 bits (2490), Expect = 0.0
 Identities = 493/568 (86%), Positives = 510/568 (89%), Gaps = 2/568 (0%)
 Frame = +3

Query: 102  MASEVAAAEVNAGKHLSSAAIADEEEKLRLLREAVNALPFNAVKDLWSIGACVRCIFRLF 281
            MA EVAAAEV   KHLSSA  A EEEKLRLLREAV+ALP +AVKDLWSIGACVRCIFRLF
Sbjct: 1    MAGEVAAAEVIGVKHLSSAEAAAEEEKLRLLREAVHALPVSAVKDLWSIGACVRCIFRLF 60

Query: 282  GLHELMCAHPSLSISKWCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSRETKFCKI 461
            GLHELMC+HPSLSISKWCDILED MR          +KDGEF NEQSHQERSRET FCKI
Sbjct: 61   GLHELMCSHPSLSISKWCDILEDVMR----------NKDGEF-NEQSHQERSRETNFCKI 109

Query: 462  CLGILQFLYNDDNGTSFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQAV 641
            CLGILQFLY DD GT  KKYSADDFA+VI+ELVKQQYQQIDSFSLEVSLP  VTENDQAV
Sbjct: 110  CLGILQFLYYDDTGTLLKKYSADDFAVVISELVKQQYQQIDSFSLEVSLPSVVTENDQAV 169

Query: 642  WLYMKNKYRHELWFQEKAECPFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSD 821
            WLYMKNKYRHELWFQEKAEC FISTKDI KLLVINPLQRLLGVKS+QSSFRVRLTYSHSD
Sbjct: 170  WLYMKNKYRHELWFQEKAECQFISTKDIFKLLVINPLQRLLGVKSTQSSFRVRLTYSHSD 229

Query: 822  ALTRDDVQEXXXXXXXXXXXXXXDLKITGESVTPHVESSDSHI--GDGPTKVRPKESQDL 995
            ALTRDDVQE              DLK TGESVTPHVES DS+I  GDG TKV PKE+QDL
Sbjct: 230  ALTRDDVQEGNGGNKRRKTGFTGDLKTTGESVTPHVESFDSNIVDGDGLTKVCPKEAQDL 289

Query: 996  SCSYLMAQLDKVSKPCCLNIHCCRSSIYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEI 1175
            SC+ LMA+LDKV KPC L IHCCRSS YIGGRYLKYSRNVSQTRWVIDDERMGEASVEEI
Sbjct: 290  SCNNLMAKLDKVGKPCSLAIHCCRSSTYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEI 349

Query: 1176 VGGTILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEGKINS 1355
            +GG ILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIE KINS
Sbjct: 350  IGGAILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEKKINS 409

Query: 1356 LESQYVRVKNLRAVGSQGWDLMREGESEKQKQYVALVWISRPVSDEDMQTISSLKELKVA 1535
            LESQYVRVKNLRAVGSQGWDLMREGE+EKQKQY ALVWISRPVSDED+QTISSLKELKVA
Sbjct: 410  LESQYVRVKNLRAVGSQGWDLMREGEAEKQKQYAALVWISRPVSDEDLQTISSLKELKVA 469

Query: 1536 QKTPIRVLHRRSPLEREKIIHWMKVERISGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQP 1715
            QKTPIRVLHRRSPLEREKIIHWM+VER+SGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQP
Sbjct: 470  QKTPIRVLHRRSPLEREKIIHWMQVERVSGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQP 529

Query: 1716 SIGSILGCRTEILQLDVTDVKMDCFQAD 1799
            SIGSILGCRTEILQLDVTDVKMDCFQ +
Sbjct: 530  SIGSILGCRTEILQLDVTDVKMDCFQEE 557


>gb|EOY15171.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
            cacao]
          Length = 548

 Score =  595 bits (1534), Expect = e-167
 Identities = 322/573 (56%), Positives = 394/573 (68%), Gaps = 10/573 (1%)
 Frame = +3

Query: 102  MASEVAAAEVNAGKHLSSAAIADEEEKLRLLREAVNALPFNAVKDLWSIGACVRCIFRLF 281
            M+++   A+V++    S A   D E  ++LL  AV +LP++ VK+L S+G C RC+ RLF
Sbjct: 1    MSNDTEPAQVSSVAAESHAGACDAE--MQLLEGAVRSLPYHVVKELLSVGVCARCVLRLF 58

Query: 282  GLHELMCAHPSLSISKWCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSRETKFCKI 461
            G+ E +  H S S S    ILE+               +  F +E   Q       FC +
Sbjct: 59   GIEEHIYCHSSFSQSMLGSILEE---------------ETSFKSEVEFQ-------FCSV 96

Query: 462  CLGILQFLYNDDNG-TSFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQA 638
            CLG+LQF Y DD   T  KK SA D AL IAELVKQ+  QID FSLEVS+P  + EN+ +
Sbjct: 97   CLGVLQFSYCDDGEETVVKKESAKDMALSIAELVKQEGHQIDGFSLEVSVPPLILENESS 156

Query: 639  VWLYMKNKYRHELWFQEKAECPFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHS 818
            +  +MK KY  E WFQE+      S KD+LK  +  PL+ LLGVK+S SSFR+RLTY+H 
Sbjct: 157  LLSHMKKKYESEPWFQERLLSKCHSVKDVLKFAITKPLETLLGVKASASSFRIRLTYTHK 216

Query: 819  DALTR--DDVQEXXXXXXXXXXXXXXDLKITGESVTPHVESS-------DSHIGDGPTKV 971
             A  +  + V+                  +  ESV    + S       +S  G     V
Sbjct: 217  RASKKVQNSVERNQECKRRKTGTENALHNVNDESVIADKDCSGYSTIETNSVTGIFSNGV 276

Query: 972  RPKESQDLSCSYLMAQLDKVSKPCCLNIHCCRSSIYIGGRYLKYSRNVSQTRWVIDDERM 1151
            + +E+ +    +  + ++KVS+PC L   CCR+ IY+ GRYLKYSRNVSQTRW+ID+ERM
Sbjct: 277  QDQETSE----HFESPIEKVSEPCHLVYVCCRTHIYLCGRYLKYSRNVSQTRWIIDEERM 332

Query: 1152 GEASVEEIVGGTILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIK 1331
            GEASVEEI+G  ILPI QGDNYKFHAAGREDIDVRMLG+GRPFL+EIQNARQVPSE ++K
Sbjct: 333  GEASVEEIIGSNILPICQGDNYKFHAAGREDIDVRMLGSGRPFLLEIQNARQVPSELIVK 392

Query: 1332 EIEGKINSLESQYVRVKNLRAVGSQGWDLMREGESEKQKQYVALVWISRPVSDEDMQTIS 1511
            E+E KIN LE++ V VKNL+ VGSQGW LM EGE+EKQKQY ALVWISRP+ DEDMQTIS
Sbjct: 393  EMESKINGLENKSVGVKNLKVVGSQGWALMHEGEAEKQKQYCALVWISRPLEDEDMQTIS 452

Query: 1512 SLKELKVAQKTPIRVLHRRSPLEREKIIHWMKVERISGSSQYLLLHLCTQAGTYIKEFVH 1691
             L ++K+ Q+TPIRVLHRRSPLEREKIIHWMK+ERI+GSSQY LLHLCTQAGTYIKEFVH
Sbjct: 453  LLNDMKILQRTPIRVLHRRSPLEREKIIHWMKIERIAGSSQYFLLHLCTQAGTYIKEFVH 512

Query: 1692 GDFGRTQPSIGSILGCRTEILQLDVTDVKMDCF 1790
            GD GRTQPS+GSILGCR EILQLDVTDVKMDCF
Sbjct: 513  GDLGRTQPSVGSILGCRAEILQLDVTDVKMDCF 545


>emb|CBI18893.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  588 bits (1516), Expect = e-165
 Identities = 329/582 (56%), Positives = 400/582 (68%), Gaps = 12/582 (2%)
 Frame = +3

Query: 81   KFQLIHEMASEVAAAEVNAGKHLSSAA-----IADEEEKLRLLREAVNALPFNAVKDLWS 245
            +FQ+ HE     A+    A   +SSAA     IA E++ +R+L +AV+ +  +AVKDL S
Sbjct: 29   RFQMHHETEDAHASNGHEAVAKVSSAAEDRRMIAGEDD-MRILNDAVSKVSPHAVKDLLS 87

Query: 246  IGACVRCIFRLFGLHELMCAHPSLSISKWCDILEDAMRKKGVDTADHPHKDGEFSNEQSH 425
            +G C+ CIFRL G+   + + PSL +S    IL             HP  D   ++  S 
Sbjct: 88   LGICIGCIFRLSGVRGHIFSCPSLLLS----IL-------------HPVIDSGAAH--SS 128

Query: 426  QERSRETKFCKICLGILQFLYNDDNGTSFKKYSADDFALVIAELVKQQYQQIDSFSLEVS 605
            QE   E   C ICLG+LQF Y DD     KK SAD+ A+ IA LVK++  + D+FSLEVS
Sbjct: 129  QESECEPVICSICLGVLQFTYFDDKKMLVKKDSADELAVSIANLVKKEGHEFDNFSLEVS 188

Query: 606  LPLAVTENDQAVWLYMKNKYRHELWFQEKAECPFISTKDILKLLVINPLQRLLGVKSSQS 785
            +P  + EN+  V LYMK KY  ELWFQEK     IS KD LKL + NPL++LL VKSS S
Sbjct: 189  IPPVIAENEHVVLLYMKKKYGSELWFQEKFLSERISAKDALKLSLCNPLEKLLDVKSSGS 248

Query: 786  S-FRVRLTYSHSDALTRD-DVQEXXXXXXXXXXXXXXDLKITGESVTPHVESSDSHIGDG 959
            S FR+RLTY+   A  ++ ++ E                     SV   +E SD    + 
Sbjct: 249  STFRIRLTYAQPRASGKNQNITERSQGCKRRRTGTENIFSTVHGSVVDGIECSDISTSEA 308

Query: 960  PTKVRP-----KESQDLSCSYLMAQLDKVSKPCCLNIHCCRSSIYIGGRYLKYSRNVSQT 1124
               +R      +++++  C      L+KV++PC L   C R+ IYIGGRYLKYSRNVSQT
Sbjct: 309  DAGIRKPSDGLQDNENSDC--FKFPLEKVNQPCHLAFLCYRTHIYIGGRYLKYSRNVSQT 366

Query: 1125 RWVIDDERMGEASVEEIVGGTILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNAR 1304
            RW+IDDERMGEASVEEI+GG ILP+  GDNYKFHAAGREDI+VRMLG+GRPFLVEIQN+R
Sbjct: 367  RWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAGREDINVRMLGSGRPFLVEIQNSR 426

Query: 1305 QVPSEALIKEIEGKINSLESQYVRVKNLRAVGSQGWDLMREGESEKQKQYVALVWISRPV 1484
             VPSEALIKEIE KIN+LE++ VRVKNL+ V S GW LM+EGE EKQKQY ALVWI RP+
Sbjct: 427  HVPSEALIKEIEVKINNLENKLVRVKNLKLVDSHGWSLMQEGEEEKQKQYAALVWIDRPL 486

Query: 1485 SDEDMQTISSLKELKVAQKTPIRVLHRRSPLEREKIIHWMKVERISGSSQYLLLHLCTQA 1664
             DEDMQ ISSLK+ K+ Q+TPIRVLHRRSPLEREKIIHWMK+E+I+GSSQY LLHLCTQA
Sbjct: 487  KDEDMQAISSLKDKKILQRTPIRVLHRRSPLEREKIIHWMKIEKIAGSSQYFLLHLCTQA 546

Query: 1665 GTYIKEFVHGDFGRTQPSIGSILGCRTEILQLDVTDVKMDCF 1790
            GTYIKEFVHGD GRT PS+GSILGCR EILQLDVT+VKMDCF
Sbjct: 547  GTYIKEFVHGDLGRTHPSVGSILGCRAEILQLDVTEVKMDCF 588


>ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Vitis
            vinifera]
          Length = 578

 Score =  586 bits (1511), Expect = e-164
 Identities = 327/582 (56%), Positives = 400/582 (68%), Gaps = 17/582 (2%)
 Frame = +3

Query: 96   HEMASEVAAAEVNAGKHLSSAA-----IADEEEKLRLLREAVNALPFNAVKDLWSIGACV 260
            HE     A+    A   +SSAA     IA E++ +R+L +AV+ +  +AVKDL S+G C+
Sbjct: 3    HETEDAHASNGHEAVAKVSSAAEDRRMIAGEDD-MRILNDAVSKVSPHAVKDLLSLGICI 61

Query: 261  RCIFRLFGLHELMCAHPSLSISKWCDILEDAMRKKGVDTADHPHKDGEFSNEQS-----H 425
             CIFRL G+   + + PSL +S    ++ +       D++ H +  G   NE S      
Sbjct: 62   GCIFRLSGVRGHIFSCPSLLLSILHPVIGEP-----TDSSTHRYT-GIGGNEDSGAAHSS 115

Query: 426  QERSRETKFCKICLGILQFLYNDDNGTSFKKYSADDFALVIAELVKQQYQQIDSFSLEVS 605
            QE   E   C ICLG+LQF Y DD     KK SAD+ A+ IA LVK++  + D+FSLEVS
Sbjct: 116  QESECEPVICSICLGVLQFTYFDDKKMLVKKDSADELAVSIANLVKKEGHEFDNFSLEVS 175

Query: 606  LPLAVTENDQAVWLYMKNKYRHELWFQEKAECPFISTKDILKLLVINPLQRLLGVKSSQS 785
            +P  + EN+  V LYMK KY  ELWFQEK     IS KD LKL + NPL++LL VKSS S
Sbjct: 176  IPPVIAENEHVVLLYMKKKYGSELWFQEKFLSERISAKDALKLSLCNPLEKLLDVKSSGS 235

Query: 786  S-FRVRLTYSHSDALTRD-DVQEXXXXXXXXXXXXXXDLKITGESVTPHVESSDSHIGDG 959
            S FR+RLTY+   A  ++ ++ E                     SV   +E SD    + 
Sbjct: 236  STFRIRLTYAQPRASGKNQNITERSQGCKRRRTGTENIFSTVHGSVVDGIECSDISTSEA 295

Query: 960  PTKVRP-----KESQDLSCSYLMAQLDKVSKPCCLNIHCCRSSIYIGGRYLKYSRNVSQT 1124
               +R      +++++  C      L+KV++PC L   C R+ IYIGGRYLKYSRNVSQT
Sbjct: 296  DAGIRKPSDGLQDNENSDC--FKFPLEKVNQPCHLAFLCYRTHIYIGGRYLKYSRNVSQT 353

Query: 1125 RWVIDDERMGEASVEEIVGGTILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNAR 1304
            RW+IDDERMGEASVEEI+GG ILP+  GDNYKFHAAGREDI+VRMLG+GRPFLVEIQN+R
Sbjct: 354  RWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAGREDINVRMLGSGRPFLVEIQNSR 413

Query: 1305 QVPSEALIKEIEGKINSLESQYVRVKNLRAVGSQGWDLMREGESEKQKQYVALVWISRPV 1484
             VPSEALIKEIE KIN+LE++ VRVKNL+ V S GW LM+EGE EKQKQY ALVWI RP+
Sbjct: 414  HVPSEALIKEIEVKINNLENKLVRVKNLKLVDSHGWSLMQEGEEEKQKQYAALVWIDRPL 473

Query: 1485 SDEDMQTISSLKELKVAQKTPIRVLHRRSPLEREKIIHWMKVERISGSSQYLLLHLCTQA 1664
             DEDMQ ISSLK+ K+ Q+TPIRVLHRRSPLEREKIIHWMK+E+I+GSSQY LLHLCTQA
Sbjct: 474  KDEDMQAISSLKDKKILQRTPIRVLHRRSPLEREKIIHWMKIEKIAGSSQYFLLHLCTQA 533

Query: 1665 GTYIKEFVHGDFGRTQPSIGSILGCRTEILQLDVTDVKMDCF 1790
            GTYIKEFVHGD GRT PS+GSILGCR EILQLDVT+VKMDCF
Sbjct: 534  GTYIKEFVHGDLGRTHPSVGSILGCRAEILQLDVTEVKMDCF 575


>ref|XP_006435287.1| hypothetical protein CICLE_v10000742mg [Citrus clementina]
            gi|568839548|ref|XP_006473743.1| PREDICTED: putative tRNA
            pseudouridine synthase Pus10-like isoform X2 [Citrus
            sinensis] gi|557537409|gb|ESR48527.1| hypothetical
            protein CICLE_v10000742mg [Citrus clementina]
          Length = 557

 Score =  578 bits (1489), Expect = e-162
 Identities = 322/583 (55%), Positives = 392/583 (67%), Gaps = 20/583 (3%)
 Frame = +3

Query: 102  MASEVAAAEVNAGK--HLSSAAI----ADEEEKLRLLREAVNALPFNAVKDLWSIGACVR 263
            MA+E   A  N+    H +SA +     DE++  +LL +AV  LP +AVKDL S   C+R
Sbjct: 1    MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLR 60

Query: 264  CIFRLFGLHELMCAHPSLSI-SKWCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSR 440
            CIFRLFG+   +C+  SLS+ S  C +L +                        HQ  S 
Sbjct: 61   CIFRLFGMQVPICS--SLSVKSLLCHVLGE--------------------QADLHQNISS 98

Query: 441  -ETKFCKICLGILQFLYNDDNGTSFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLA 617
             E   C+ CLGILQF Y  D     +  SA DFA+ IAELVK++  QIDSFSLEVS+P  
Sbjct: 99   VEPNICRSCLGILQFTYCGDKERVVENESACDFAVAIAELVKKEGHQIDSFSLEVSMPPT 158

Query: 618  VTENDQAVWLYMKNKYRHELWFQEKAECPFISTKDILKLLVINPLQRLLGVKSSQSSFRV 797
            + EN+  + LY+K KYR E WF++++     STKD LK  + NPL+ LL VK   S+F +
Sbjct: 159  ILENENKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHI 218

Query: 798  RLTYSHSDALTR--DDVQEXXXXXXXXXXXXXXDLKITGESVTPHVESS----------D 941
            RLTYS  +A  R  + V++                 +  +S    VE+S          D
Sbjct: 219  RLTYSRVEASIRIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTTEVIPVD 278

Query: 942  SHIGDGPTKVRPKESQDLSCSYLMAQLDKVSKPCCLNIHCCRSSIYIGGRYLKYSRNVSQ 1121
                +G     P E+ +         L KV++PC L   C R+ IY GGRYLKYSRNVSQ
Sbjct: 279  EKSSNGLQDNEPSETHEFP-------LKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQ 331

Query: 1122 TRWVIDDERMGEASVEEIVGGTILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNA 1301
            TRW+ID+ERMGEAS+EEI+GG ILP+ +GD+YKFHAAGREDIDVRMLG+GRPFL EIQNA
Sbjct: 332  TRWIIDEERMGEASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNA 391

Query: 1302 RQVPSEALIKEIEGKINSLESQYVRVKNLRAVGSQGWDLMREGESEKQKQYVALVWISRP 1481
            R+VPSE L+KEIE KINSLE++ VRVKNL+ VGSQGW LMREGE+EKQKQY ALVWISRP
Sbjct: 392  REVPSELLVKEIESKINSLENKLVRVKNLKIVGSQGWTLMREGEAEKQKQYAALVWISRP 451

Query: 1482 VSDEDMQTISSLKELKVAQKTPIRVLHRRSPLEREKIIHWMKVERISGSSQYLLLHLCTQ 1661
            + DED QTISSLKE ++ QKTPIRVLHRRSPLEREKII+WMK+E+I+GSSQY LLH+CTQ
Sbjct: 452  LQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQ 511

Query: 1662 AGTYIKEFVHGDFGRTQPSIGSILGCRTEILQLDVTDVKMDCF 1790
            AGTYIKEFVHGD GRT PSIGSILGCR EILQLDVTDVKM+CF
Sbjct: 512  AGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCF 554


>gb|EMJ23679.1| hypothetical protein PRUPE_ppa004049mg [Prunus persica]
          Length = 533

 Score =  573 bits (1478), Expect = e-161
 Identities = 304/541 (56%), Positives = 372/541 (68%), Gaps = 3/541 (0%)
 Frame = +3

Query: 177  EKLRLLREAVNALPFNAVKDLWSIGACVRCIFRLFGLHELMCAHPSLSISKWCDILEDAM 356
            + +R L + V  LP  AV DL SIG C RCI RLFG+ E +    SLS S    +L D+ 
Sbjct: 16   DNVRALCDVVRELPIRAVIDLLSIGVCTRCILRLFGIREHVYYRSSLSPSMLSSVLGDS- 74

Query: 357  RKKGVDTADHPHK-DGEFSNEQSHQERSRETKFCKICLGILQFLYNDDNGTSFKKYSADD 533
                  T    H  DG F          RE   C ICLGILQF Y +D     +K SA++
Sbjct: 75   ------TCSEKHMVDGNF----------RELVVCSICLGILQFTYWEDKKLVTEKESANE 118

Query: 534  FALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQAVWLYMKNKYRHELWFQEKAECPFIS 713
             A+ I+ L++QQ  +IDSFSLEVS+P  V END  VWLYMK KY  ELWFQ K+    IS
Sbjct: 119  LAVSISSLIRQQGFEIDSFSLEVSIPPIVLENDHTVWLYMKRKYESELWFQGKSISECIS 178

Query: 714  TKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSH--SDALTRDDVQEXXXXXXXXXXXXX 887
             KD LK+ ++  L+ +LG KS+ S+FR+RLTY+H  S     + V+              
Sbjct: 179  AKDALKISLMESLETMLGCKSNMSAFRIRLTYTHRISSKTVENSVEGCHGGAGNGLNTID 238

Query: 888  XDLKITGESVTPHVESSDSHIGDGPTKVRPKESQDLSCSYLMAQLDKVSKPCCLNIHCCR 1067
             D+K +G  +        S +          ++ +LS   L   L + ++PCCL   C R
Sbjct: 239  DDIKCSGPPIEAGAVVEGSFVS--------LQANELS-ECLKLPLGQSNEPCCLEFLCYR 289

Query: 1068 SSIYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEIVGGTILPIFQGDNYKFHAAGREDI 1247
            + IY+GGRYLKYSRNVSQT W+IDDERMGEASVEEI+G  ILP+ +GDNYKFHAAGREDI
Sbjct: 290  TQIYVGGRYLKYSRNVSQTCWIIDDERMGEASVEEILGSNILPLCRGDNYKFHAAGREDI 349

Query: 1248 DVRMLGTGRPFLVEIQNARQVPSEALIKEIEGKINSLESQYVRVKNLRAVGSQGWDLMRE 1427
            DVRMLG+GRPFL+EIQNAR +PSE  +K +E KIN+LE + V VKNL+ VGSQ W+LMRE
Sbjct: 350  DVRMLGSGRPFLLEIQNARNIPSEESVKFLETKINNLEKKLVGVKNLKLVGSQSWELMRE 409

Query: 1428 GESEKQKQYVALVWISRPVSDEDMQTISSLKELKVAQKTPIRVLHRRSPLEREKIIHWMK 1607
            GE+EKQKQY ALVWISRP+ DED+Q+ISSL+++ + Q+TPIRVLHRRSPLEREKIIHWM+
Sbjct: 410  GEAEKQKQYTALVWISRPLKDEDLQSISSLEDMHILQRTPIRVLHRRSPLEREKIIHWMR 469

Query: 1608 VERISGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQPSIGSILGCRTEILQLDVTDVKMDC 1787
            +ERI GSSQY LLHLCTQAGTYIKEF+HGD GRTQPSIGSIL CR EIL+LDVTDVKM+C
Sbjct: 470  IERIVGSSQYFLLHLCTQAGTYIKEFIHGDLGRTQPSIGSILTCRAEILRLDVTDVKMEC 529

Query: 1788 F 1790
            F
Sbjct: 530  F 530


>ref|XP_006473742.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like isoform X1
            [Citrus sinensis]
          Length = 561

 Score =  572 bits (1474), Expect = e-160
 Identities = 322/587 (54%), Positives = 392/587 (66%), Gaps = 24/587 (4%)
 Frame = +3

Query: 102  MASEVAAAEVNAGK--HLSSAAI----ADEEEKLRLLREAVNALPFNAVKDLWSIGACVR 263
            MA+E   A  N+    H +SA +     DE++  +LL +AV  LP +AVKDL S   C+R
Sbjct: 1    MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLR 60

Query: 264  CIFRLFGLHELMCAHPSLSI-SKWCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSR 440
            CIFRLFG+   +C+  SLS+ S  C +L +                        HQ  S 
Sbjct: 61   CIFRLFGMQVPICS--SLSVKSLLCHVLGE--------------------QADLHQNISS 98

Query: 441  -ETKFCKICLGILQFLYNDDNGTSFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLA 617
             E   C+ CLGILQF Y  D     +  SA DFA+ IAELVK++  QIDSFSLEVS+P  
Sbjct: 99   VEPNICRSCLGILQFTYCGDKERVVENESACDFAVAIAELVKKEGHQIDSFSLEVSMPPT 158

Query: 618  VTENDQAVWLYMKNKYRHELWFQEKAECPFISTKDILKLLVINPLQRLLGVKSSQSSFRV 797
            + EN+  + LY+K KYR E WF++++     STKD LK  + NPL+ LL VK   S+F +
Sbjct: 159  ILENENKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHI 218

Query: 798  RLTYSHSDALTR--DDVQEXXXXXXXXXXXXXXDLKITGESVTPHVESS----------D 941
            RLTYS  +A  R  + V++                 +  +S    VE+S          D
Sbjct: 219  RLTYSRVEASIRIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTTEVIPVD 278

Query: 942  SHIGDGPTKVRPKESQDLSCSYLMAQLDKVSKPCCLNIHCCRSSIYIGGRYLKYSRNVSQ 1121
                +G     P E+ +         L KV++PC L   C R+ IY GGRYLKYSRNVSQ
Sbjct: 279  EKSSNGLQDNEPSETHEFP-------LKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQ 331

Query: 1122 TRWVIDDERMGEASVEEIVGGTILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNA 1301
            TRW+ID+ERMGEAS+EEI+GG ILP+ +GD+YKFHAAGREDIDVRMLG+GRPFL EIQNA
Sbjct: 332  TRWIIDEERMGEASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNA 391

Query: 1302 RQVPSEALIKEIEGKINSLESQYVRVKNLRAVGSQGWDLMREGESEKQKQYVALVWISRP 1481
            R+VPSE L+KEIE KINSLE++ VRVKNL+ VGSQGW LMREGE+EKQKQY ALVWISRP
Sbjct: 392  REVPSELLVKEIESKINSLENKLVRVKNLKIVGSQGWTLMREGEAEKQKQYAALVWISRP 451

Query: 1482 VSDEDMQTISSLKE----LKVAQKTPIRVLHRRSPLEREKIIHWMKVERISGSSQYLLLH 1649
            + DED QTISSLKE     ++ QKTPIRVLHRRSPLEREKII+WMK+E+I+GSSQY LLH
Sbjct: 452  LQDEDFQTISSLKETVRCYQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLH 511

Query: 1650 LCTQAGTYIKEFVHGDFGRTQPSIGSILGCRTEILQLDVTDVKMDCF 1790
            +CTQAGTYIKEFVHGD GRT PSIGSILGCR EILQLDVTDVKM+CF
Sbjct: 512  MCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCF 558


>ref|XP_002510624.1| conserved hypothetical protein [Ricinus communis]
            gi|223551325|gb|EEF52811.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 565

 Score =  551 bits (1420), Expect = e-154
 Identities = 295/569 (51%), Positives = 386/569 (67%), Gaps = 8/569 (1%)
 Frame = +3

Query: 117  AAAEVNAGKHLSSAAIADEEEKLRLLREAVNALPFNAVKDLWSIGACVRCIFRLFGLHEL 296
            AAA V +    +  +I DE+  +RL  EAV +LP +AVK L   G C+RCIFRL G+   
Sbjct: 15   AAAPVFSPTANAKFSIGDED--MRLFNEAVRSLPSHAVKGLLRNGICMRCIFRLLGVQGH 72

Query: 297  MCAHPSLSISKWCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSRETKFCKICLGIL 476
            +     LS S   +IL ++ +            D +     ++ E   + + C +CLGIL
Sbjct: 73   IFFTYPLSRSLMHNILGESWKD-----------DEDMKGCSTYNESGVDQEICNVCLGIL 121

Query: 477  QFLYNDDNGTSFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQAVWLYMK 656
            QF++ DD G   KK++A +  + IAEL+KQ+  QIDSFSLEVS+   + EN++ + LYM+
Sbjct: 122  QFIHRDDKGVLVKKHNAVNLCVSIAELIKQEGHQIDSFSLEVSIAPIIQENERVIRLYME 181

Query: 657  NKYRHELWFQEK-AECPFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHS--DAL 827
             KYR ELWFQE  ++C  I TK+ LK  + NPL+R+L VKS  SS R+RLTY+ +    +
Sbjct: 182  RKYRSELWFQESVSKC--ICTKEALKFAIANPLERMLDVKSGPSSCRIRLTYTQAKPSGI 239

Query: 828  TRDDVQEXXXXXXXXXXXXXXDLKITGESVTPHVESSDSHIGDGPTKVRPKES-----QD 992
              + V                   +  E +       DS +  G   +   ES     ++
Sbjct: 240  APNSVPGGEGCKRRKTGITDAPESVNNELINARNGCFDSSMYKG---IDSSESSFCGLEN 296

Query: 993  LSCSYLMAQLDKVSKPCCLNIHCCRSSIYIGGRYLKYSRNVSQTRWVIDDERMGEASVEE 1172
               S  +   +KV +PC L   C R+ IY GGRYLK+SRNVSQTRW+IDDERMGEAS+EE
Sbjct: 297  HESSECIFPKEKVKEPCNLLFLCYRTPIYFGGRYLKFSRNVSQTRWIIDDERMGEASIEE 356

Query: 1173 IVGGTILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEGKIN 1352
            I+GG+I P+ QGD+YKFHAAGREDIDVRMLG+GRPFLVEIQN RQ+PSE L++EIE KIN
Sbjct: 357  IIGGSIFPMCQGDSYKFHAAGREDIDVRMLGSGRPFLVEIQNPRQLPSETLVEEIETKIN 416

Query: 1353 SLESQYVRVKNLRAVGSQGWDLMREGESEKQKQYVALVWISRPVSDEDMQTISSLKELKV 1532
            ++  + V V++L+ V +  W LM EGE+EKQKQY ALVWISRP+ D+D+Q+I+SLK++++
Sbjct: 417  NMHDKLVGVRHLKMVSNHSWTLMHEGEAEKQKQYCALVWISRPLEDQDLQSIASLKDMQI 476

Query: 1533 AQKTPIRVLHRRSPLEREKIIHWMKVERISGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQ 1712
             Q+TP+RVLHRRSPLER+KIIHWMK+ER++GS QY LLHLCTQAGTYIKEFVHGD GRT 
Sbjct: 477  LQRTPVRVLHRRSPLERQKIIHWMKIERLTGSCQYFLLHLCTQAGTYIKEFVHGDLGRTH 536

Query: 1713 PSIGSILGCRTEILQLDVTDVKMDCFQAD 1799
            PSIGSILGCR EILQLDVT+VKMDCF A+
Sbjct: 537  PSIGSILGCRAEILQLDVTEVKMDCFLAE 565


>ref|XP_004499319.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like isoform X1
            [Cicer arietinum] gi|502126472|ref|XP_004499320.1|
            PREDICTED: putative tRNA pseudouridine synthase
            Pus10-like isoform X2 [Cicer arietinum]
          Length = 508

 Score =  543 bits (1398), Expect = e-151
 Identities = 293/543 (53%), Positives = 361/543 (66%)
 Frame = +3

Query: 162  IADEEEKLRLLREAVNALPFNAVKDLWSIGACVRCIFRLFGLHELMCAHPSLSISKWCDI 341
            +  E EK   L E V ALP +AV  L S+G CVRCIFR+FG+   + A PSLS S +   
Sbjct: 16   VTSENEKT--LEEVVQALPSDAVNHLVSLGICVRCIFRVFGIEGRVYASPSLSPSVFASA 73

Query: 342  LEDAMRKKGVDTADHPHKDGEFSNEQSHQERSRETKFCKICLGILQFLYNDDNGTSFKKY 521
            +E             P +D   +N   HQ        C +CLGILQF + D +GT  +  
Sbjct: 74   VEQLP----------PTED---NNNNKHQ-------LCTLCLGILQFTFRDHDGTILRN- 112

Query: 522  SADDFALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQAVWLYMKNKYRHELWFQEKAEC 701
              DD  L+I+++VK+     D+FSLEVS+P  +  ND ++  YMK KY  + WFQE+   
Sbjct: 113  --DDLPLLISDMVKRDGYHSDTFSLEVSIPPIILHNDNSLRSYMKIKYGSQPWFQERC-- 168

Query: 702  PFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSDALTRDDVQEXXXXXXXXXXX 881
              ISTKD LK  + +PLQ LL  KS+  SFR+RLTY+ S      D  +           
Sbjct: 169  --ISTKDALKFSLQHPLQNLLECKSTMGSFRIRLTYTAS-----KDADKCLDNAESCKRR 221

Query: 882  XXXDLKITGESVTPHVESSDSHIGDGPTKVRPKESQDLSCSYLMAQLDKVSKPCCLNIHC 1061
               +  + G+                P+ +  +      C ++   L+  ++PC     C
Sbjct: 222  KTGECNLDGQK---------------PSSISLENESSDCCKFM---LEMPNEPCHFAYSC 263

Query: 1062 CRSSIYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEIVGGTILPIFQGDNYKFHAAGRE 1241
             R+  Y GGRYLKYSRNVSQTRW+IDDERMGEASVEEI+GG IL   Q D++KFHAAGRE
Sbjct: 264  YRTPFYFGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILQACQADSFKFHAAGRE 323

Query: 1242 DIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEGKINSLESQYVRVKNLRAVGSQGWDLM 1421
            DIDVRMLG GRPFLVE+QNARQVPSE  +K+IE KIN++E++ VRVKNL+ VGS GWDLM
Sbjct: 324  DIDVRMLGPGRPFLVEVQNARQVPSELSVKDIEKKINTMENKLVRVKNLKLVGSHGWDLM 383

Query: 1422 REGESEKQKQYVALVWISRPVSDEDMQTISSLKELKVAQKTPIRVLHRRSPLEREKIIHW 1601
            REGE+EKQKQY ALVWISRP+ DED+Q +SSLK+LKV Q+TP+RVLHRRSPLEREKIIHW
Sbjct: 384  REGEAEKQKQYAALVWISRPLKDEDLQHVSSLKDLKVLQRTPVRVLHRRSPLEREKIIHW 443

Query: 1602 MKVERISGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQPSIGSILGCRTEILQLDVTDVKM 1781
            MK+E I+ SSQY LLHLCTQAGTYIKEFVHGD GRT PSIGS+LGCR EILQLDVTD+KM
Sbjct: 444  MKIETIAESSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSMLGCRAEILQLDVTDIKM 503

Query: 1782 DCF 1790
            +CF
Sbjct: 504  ECF 506


>gb|ESW32602.1| hypothetical protein PHAVU_001G001600g [Phaseolus vulgaris]
          Length = 503

 Score =  534 bits (1375), Expect = e-149
 Identities = 293/542 (54%), Positives = 354/542 (65%), Gaps = 1/542 (0%)
 Frame = +3

Query: 168  DEEEKLRLLREAVNALPFNAVKDLWSIGACVRCIFRLFGLHELMCAHPSLSISKWCDILE 347
            +EE KL    E+V ALP +AVK+L S G C RCIFRLFGLH  + A P  S+S       
Sbjct: 17   EEEHKLESESESVQALPSDAVKELLSEGVCARCIFRLFGLHGRVYASPP-SLSSL----- 70

Query: 348  DAMRKKGVDTADHPHKDGEFSNEQSHQERSRETKFCKICLGILQFL-YNDDNGTSFKKYS 524
                                 +  +HQ        C +C GILQF  Y+DD  T  + ++
Sbjct: 71   ---------------------SPTTHQ-------LCTLCFGILQFTCYSDDTQTLLQNHN 102

Query: 525  ADDFALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQAVWLYMKNKYRHELWFQEKAECP 704
                 L+IA+ VK+   Q ++FSLEVS+P  +  ND ++  YMK K+  + WFQE     
Sbjct: 103  ---LPLLIADTVKRHAYQFNTFSLEVSIPPIILHNDNSLRSYMKTKFGSQPWFQENLHTG 159

Query: 705  FISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSDALTRDDVQEXXXXXXXXXXXX 884
             ISTKD LK  +I PL+ LL  KSS   FR+RLTY+H  A   D  Q+            
Sbjct: 160  CISTKDALKFSLIYPLENLLECKSSMGDFRIRLTYTHPKASKGD--QKGSDSAQTCKRRK 217

Query: 885  XXDLKITGESVTPHVESSDSHIGDGPTKVRPKESQDLSCSYLMAQLDKVSKPCCLNIHCC 1064
              +  I GE   P   S ++   D              C   +  L+K ++PC     C 
Sbjct: 218  IGESNIDGER--PFSNSLENDFSD--------------CGEFL--LEKPNEPCHFAFFCY 259

Query: 1065 RSSIYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEIVGGTILPIFQGDNYKFHAAGRED 1244
            R+ +Y GGRYLKYSRNVSQT W+IDDERMGEASVEEI+GG IL   QGD++KFHAAGRED
Sbjct: 260  RTPLYFGGRYLKYSRNVSQTCWIIDDERMGEASVEEIIGGNILQSCQGDSFKFHAAGRED 319

Query: 1245 IDVRMLGTGRPFLVEIQNARQVPSEALIKEIEGKINSLESQYVRVKNLRAVGSQGWDLMR 1424
            IDVRMLG GRPFLVE+QNAR +PSE  +K++E KIN++E + VRVKNL+ VGS GWDLMR
Sbjct: 320  IDVRMLGPGRPFLVEVQNARHIPSELFVKDVEKKINNMEKKLVRVKNLKLVGSDGWDLMR 379

Query: 1425 EGESEKQKQYVALVWISRPVSDEDMQTISSLKELKVAQKTPIRVLHRRSPLEREKIIHWM 1604
            EGE+EKQKQY ALVWISRP+ DED Q ISS K+LK+ Q+TPIRVLHRRSPL+REKIIHWM
Sbjct: 380  EGEAEKQKQYAALVWISRPLKDEDFQCISSHKDLKLLQRTPIRVLHRRSPLDREKIIHWM 439

Query: 1605 KVERISGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQPSIGSILGCRTEILQLDVTDVKMD 1784
            K+E I+GSSQY LLHLCTQAGTYIKEFVHGD GRT PSIGSILGCR EILQLDVTD+KM+
Sbjct: 440  KIEAIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTDIKME 499

Query: 1785 CF 1790
            CF
Sbjct: 500  CF 501


>ref|XP_002307763.2| hypothetical protein POPTR_0005s26880g [Populus trichocarpa]
            gi|550339817|gb|EEE94759.2| hypothetical protein
            POPTR_0005s26880g [Populus trichocarpa]
          Length = 520

 Score =  532 bits (1371), Expect = e-148
 Identities = 300/579 (51%), Positives = 374/579 (64%), Gaps = 13/579 (2%)
 Frame = +3

Query: 102  MASEVAAAEVNAGKHLSSAAIADEEEKL-------RLLREAVNALPFNAVKDLWSIGACV 260
            M+SE  AA+ + G         +++ ++       R L +AV +LP +AVKDL S G   
Sbjct: 1    MSSETEAAQFSNGTDAVQVISPNDDHRVTPGDDERRHLNDAVRSLPSHAVKDLLSAG--- 57

Query: 261  RCIFRLFGLHELMCAHPSLSISKWCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSR 440
                                                          G+ S+ +S  E   
Sbjct: 58   ----------------------------------------------GDSSSSES-MESEL 70

Query: 441  ETKFCKICLGILQFLYNDDNGTSFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLAV 620
            + + C+ICLGILQF+Y D+     K+ + D+ A  IAEL++Q+  QID FSLEVS+P  +
Sbjct: 71   KPEVCRICLGILQFIYRDEKEMLVKRKNGDELAASIAELIRQEGHQIDGFSLEVSIPPII 130

Query: 621  TENDQAVWLYMKNKYRHELWFQEK-AECPFISTKDILKLLVINPLQRLLGVKSSQSSFRV 797
             EN+QAV LYMK KY  ELWFQE+ +EC  ISTKD LK  ++NPL+ +L VKS  S  R+
Sbjct: 131  FENEQAVRLYMKKKYGSELWFQERLSEC--ISTKDALKFAIVNPLEIILDVKSGPSYVRI 188

Query: 798  RLTYSHSDALTRDDVQEXXXXXXXXXXXXXXDLKITGESVTPHVESSDSHIGDG-PTKVR 974
            RLTY+     T+  +                D  +  E V       D  +G G P   R
Sbjct: 189  RLTYTE----TKPSIIPSKSVDRNGGTNNGLDT-VHVELVGNGTGCCDLSLGQGSPASGR 243

Query: 975  PK----ESQDLSCSYLMAQLDKVSKPCCLNIHCCRSSIYIGGRYLKYSRNVSQTRWVIDD 1142
                  E +   CS     L++V++PC L   C R+ IY GGRYLK+SRNVSQTRW+IDD
Sbjct: 244  SSTGLAEHESSECSNF--PLERVNEPCHLVFLCYRTPIYFGGRYLKFSRNVSQTRWIIDD 301

Query: 1143 ERMGEASVEEIVGGTILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEA 1322
            ERMGEAS+EEI+GG ILP+ QGD+YKFHAAGREDIDVRMLG+GRPFLVE+QNAR+VPSEA
Sbjct: 302  ERMGEASIEEIIGGNILPMCQGDSYKFHAAGREDIDVRMLGSGRPFLVEVQNAREVPSEA 361

Query: 1323 LIKEIEGKINSLESQYVRVKNLRAVGSQGWDLMREGESEKQKQYVALVWISRPVSDEDMQ 1502
            L+KEIE ++N+L ++ V VKNL  V S  WDLMREGE+EKQKQY ALVWISRP+ DED+Q
Sbjct: 362  LVKEIETRMNNLGNKLVGVKNLSLVTSHSWDLMREGEAEKQKQYSALVWISRPLEDEDLQ 421

Query: 1503 TISSLKELKVAQKTPIRVLHRRSPLEREKIIHWMKVERISGSSQYLLLHLCTQAGTYIKE 1682
             I+S K+L++ Q+TP+RVLHRRSPLER KIIHWMK+E+I+GSSQY LLHLCTQAGTYIKE
Sbjct: 422  CIASHKDLQILQRTPVRVLHRRSPLERGKIIHWMKIEQITGSSQYFLLHLCTQAGTYIKE 481

Query: 1683 FVHGDFGRTQPSIGSILGCRTEILQLDVTDVKMDCFQAD 1799
            FVHGD GRT PSIGSIL CR EILQLDVTDVKMDCF A+
Sbjct: 482  FVHGDLGRTHPSIGSILRCRAEILQLDVTDVKMDCFLAE 520


>gb|EXB88230.1| hypothetical protein L484_011660 [Morus notabilis]
          Length = 514

 Score =  529 bits (1363), Expect = e-147
 Identities = 291/567 (51%), Positives = 361/567 (63%), Gaps = 4/567 (0%)
 Frame = +3

Query: 102  MASEVAAAEVNAGKHLSSAAIADEEE-KLRLLREAVNALPFNAVKDLWSIGACVRCIFRL 278
            MA    A+++  G   ++ AI+D  +  +R + E +   P +AVKDL S+G C+RCI RL
Sbjct: 1    MAEIDNASQICGGDRQAAQAISDVGDGDVRDVCETLRGFPSHAVKDLLSLGVCLRCILRL 60

Query: 279  FGLHELMCAHPSLSISK-WCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSRETKFC 455
             G+   +  + +LS+S     +  D    +     D   ++G+ S   + +E       C
Sbjct: 61   LGIRGELYDNCTLSLSSILSSVFGDLTDSEKHTINDASVENGKCSESPNLKELEVNEALC 120

Query: 456  KICLGILQFLYNDDNGTSFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQ 635
             +CLGILQF Y DD  +  +K SA DFA  I ELVKQ+  QID FSLEVS+P  + EN+Q
Sbjct: 121  SLCLGILQFSYCDDKASVVRKDSAYDFASSIVELVKQEGHQIDGFSLEVSIPPVIQENEQ 180

Query: 636  AVWLYMKNKYRHELWFQEKAECPFISTKDILKLLV--INPLQRLLGVKSSQSSFRVRLTY 809
            +V LYMK KY  E WFQ K+     S KD LK      N L+ + G+K +          
Sbjct: 181  SVCLYMKKKYESESWFQRKSLSERDSVKDALKTFTGTDNDLETVDGIKVAN--------- 231

Query: 810  SHSDALTRDDVQEXXXXXXXXXXXXXXDLKITGESVTPHVESSDSHIGDGPTKVRPKESQ 989
                                             + +   +ESS     D     R     
Sbjct: 232  ------------------------------FPSDEIAAVIESSLETCQDSGLSDR----- 256

Query: 990  DLSCSYLMAQLDKVSKPCCLNIHCCRSSIYIGGRYLKYSRNVSQTRWVIDDERMGEASVE 1169
                       ++VS+PC L  HCCR+ IY GGRYLKYSRNVSQTRW+IDDERMG+ASVE
Sbjct: 257  ---------NFNQVSEPCQLVFHCCRTHIYFGGRYLKYSRNVSQTRWIIDDERMGDASVE 307

Query: 1170 EIVGGTILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEGKI 1349
            E++G  ILP+ +GD+YKFHAAGREDIDVRMLG+GRPFLVEIQN R +P +  +K IE KI
Sbjct: 308  ELIGSNILPVCRGDSYKFHAAGREDIDVRMLGSGRPFLVEIQNGRHLPCDEDVKNIEEKI 367

Query: 1350 NSLESQYVRVKNLRAVGSQGWDLMREGESEKQKQYVALVWISRPVSDEDMQTISSLKELK 1529
            N+LE++ V V+NL+ +GSQGW LM EGE+EKQKQY ALVWISRP+ DED Q+ISS KE++
Sbjct: 368  NNLENKLVGVRNLKIMGSQGWTLMHEGEAEKQKQYAALVWISRPLKDEDFQSISSYKEMR 427

Query: 1530 VAQKTPIRVLHRRSPLEREKIIHWMKVERISGSSQYLLLHLCTQAGTYIKEFVHGDFGRT 1709
            V QKTPIRVLHRRSPLEREKIIHWMK+E+I GSSQY LLHLCTQAGTYIKEFVHGD GRT
Sbjct: 428  VVQKTPIRVLHRRSPLEREKIIHWMKIEKIVGSSQYFLLHLCTQAGTYIKEFVHGDLGRT 487

Query: 1710 QPSIGSILGCRTEILQLDVTDVKMDCF 1790
             PSIG+ILGCR EILQLDVTDVKMDCF
Sbjct: 488  YPSIGTILGCRAEILQLDVTDVKMDCF 514


>ref|XP_004292924.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Fragaria
            vesca subsp. vesca]
          Length = 528

 Score =  527 bits (1358), Expect = e-147
 Identities = 288/565 (50%), Positives = 376/565 (66%), Gaps = 2/565 (0%)
 Frame = +3

Query: 102  MASEVAAAEVNAGKHLSSAAIADEEEKLRLLREAVNALPFNAVKDLWSIGACVRCIFRLF 281
            MA+E+ AA        S A +  ++  +R L +AV ALP +AV +L+SIG C RCI RLF
Sbjct: 1    MATEIEAA--------SPATVNGDD--VRALYDAVRALPSHAVIELFSIGVCTRCILRLF 50

Query: 282  GLHELMCAHPSLSISKWCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSRETKFCKI 461
            G+   +  H  LS S    +  D                   S +  ++   RE   C++
Sbjct: 51   GVSGSVHYHSPLSQSMLSSVFSD-------------------STDLDNRSSLREPVVCRL 91

Query: 462  CLGILQFLYNDDNGTSFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQAV 641
            CLGILQF Y++D     KK S +  A  I  L+++Q  +IDSFSLEVS+P  V EN++ V
Sbjct: 92   CLGILQFTYSEDKKV-VKKESVEGLAAYICNLIREQGFEIDSFSLEVSIPPVVLENERIV 150

Query: 642  WLYMKNKYRHELWFQEKAECPFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSD 821
            W ++K K+  EL  QE++    IS KD LK+ +   L+ +L  +SS  +FR+RLTY++  
Sbjct: 151  WDHLKTKFESELQLQERSLPECISVKDALKVSLTETLETMLDCRSSTGTFRIRLTYTYP- 209

Query: 822  ALTRDDVQEXXXXXXXXXXXXXXDLKITGESVTPHVESSDSHIG-DGPTKVRPKESQDL- 995
             ++ + V+                 + TG  +  H  SSD      G +   P+  Q + 
Sbjct: 210  -VSSETVENSVDGCHGSKR------RKTGTQI--HFASSDDETKCSGFSASEPESMQAIK 260

Query: 996  SCSYLMAQLDKVSKPCCLNIHCCRSSIYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEI 1175
            S +    ++++ ++PCCL   C R+ IY GGRYLKYSRNVSQ+ W+IDDERMGEASVEEI
Sbjct: 261  SLNCPKFRMEQTNEPCCLEFLCYRTQIYFGGRYLKYSRNVSQSCWIIDDERMGEASVEEI 320

Query: 1176 VGGTILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEGKINS 1355
            +G  ILPI +GD YKFHAAGREDIDVRMLG+GRPFLVE+QNAR VPS+  +K+++ KIN+
Sbjct: 321  IGSNILPICRGDKYKFHAAGREDIDVRMLGSGRPFLVEVQNARYVPSQESVKDLQAKINN 380

Query: 1356 LESQYVRVKNLRAVGSQGWDLMREGESEKQKQYVALVWISRPVSDEDMQTISSLKELKVA 1535
            L+++ V VKNL+ VGSQ WDLMREGE+EKQKQY ALVW SR + DED Q+ISS+K++ + 
Sbjct: 381  LQNKLVGVKNLKLVGSQSWDLMREGEAEKQKQYTALVWTSRILKDEDFQSISSVKDMHIL 440

Query: 1536 QKTPIRVLHRRSPLEREKIIHWMKVERISGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQP 1715
            Q+TPIRVLHRRSPLER++IIHWM++ERI GSSQY LLHLCTQAGTYIKEFVHGD GRTQP
Sbjct: 441  QRTPIRVLHRRSPLERKRIIHWMRIERIVGSSQYFLLHLCTQAGTYIKEFVHGDLGRTQP 500

Query: 1716 SIGSILGCRTEILQLDVTDVKMDCF 1790
              GSIL  R EIL+LDVTDVKMDCF
Sbjct: 501  CFGSILDTRAEILRLDVTDVKMDCF 525


>ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Glycine
            max]
          Length = 484

 Score =  526 bits (1354), Expect = e-146
 Identities = 288/534 (53%), Positives = 347/534 (64%), Gaps = 3/534 (0%)
 Frame = +3

Query: 198  EAVNALPFNAVKDLWSIGACVRCIFRLFGLHELMCAHPSLSISKWCDILEDAMRKKGVDT 377
            + V ALP +AVK+L S G C RCIFRLFGL   + A P  S+S   D             
Sbjct: 14   QMVRALPSDAVKELLSHGVCTRCIFRLFGLQGPVYASPP-SLSSLFDA------------ 60

Query: 378  ADHPHKDGEFSNEQSHQERSRETKFCKICLGILQFLYNDDNGTSFKKYSADDFALVIAEL 557
                               +++   C +CLGILQF Y++           D+  L+IA++
Sbjct: 61   -------------------TQQDCLCTLCLGILQFTYSNVQN--------DNLPLLIADM 93

Query: 558  VKQQYQQIDSFSLEVSLPLAVTENDQAVWLYMKNKYRHELWFQEKAECPFISTKDILKLL 737
            VK+Q  Q D+FSLEVS+P  + ++   +  YMK KY  + WFQE      ISTKD LK  
Sbjct: 94   VKRQAYQFDTFSLEVSIPPIIIDDVNFLCSYMKTKYGSQPWFQENLHSGCISTKDALKFS 153

Query: 738  VINPLQRLLGVKSSQSSFRVRLTYSHSDALTRDDVQEXXXXXXXXXXXXXXDLKITGE-- 911
            +I PLQ LL  KS+   FR+RLTY+H    T+ + +               +  I GE  
Sbjct: 154  LIYPLQNLLECKSNMGPFRIRLTYTH----TKGNDKSSDCAAETCKRRKIGEPSIVGERS 209

Query: 912  -SVTPHVESSDSHIGDGPTKVRPKESQDLSCSYLMAQLDKVSKPCCLNIHCCRSSIYIGG 1088
             S T   +SSD                   C +L   L+K ++PC     C R+  Y GG
Sbjct: 210  FSSTLENDSSDC------------------CKFL---LEKANEPCHFTYSCYRTPFYFGG 248

Query: 1089 RYLKYSRNVSQTRWVIDDERMGEASVEEIVGGTILPIFQGDNYKFHAAGREDIDVRMLGT 1268
            RYLKYSRNVSQTRW+IDDERMGEASVEEI+GG IL   QGD++KFHAAGREDIDVRMLG 
Sbjct: 249  RYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILQACQGDSFKFHAAGREDIDVRMLGP 308

Query: 1269 GRPFLVEIQNARQVPSEALIKEIEGKINSLESQYVRVKNLRAVGSQGWDLMREGESEKQK 1448
            GRPFLVE+QN R +PSE  +K+IE  IN +E++ VRVKNL+ VGS GW+LMREGE+EKQK
Sbjct: 309  GRPFLVEVQNGRHIPSELFVKDIEKTINKMENKLVRVKNLKLVGSDGWNLMREGEAEKQK 368

Query: 1449 QYVALVWISRPVSDEDMQTISSLKELKVAQKTPIRVLHRRSPLEREKIIHWMKVERISGS 1628
            QY ALVWISRP+ DED+Q +SSLK+LKV Q+TPIRVLHRRSPLEREKIIHWMK E I+GS
Sbjct: 369  QYAALVWISRPLKDEDIQCVSSLKDLKVLQRTPIRVLHRRSPLEREKIIHWMKTETIAGS 428

Query: 1629 SQYLLLHLCTQAGTYIKEFVHGDFGRTQPSIGSILGCRTEILQLDVTDVKMDCF 1790
            SQY LLHLCTQAGTYIKEFVHGD GRT PSIGSILGCR EILQLDVTD+KM+CF
Sbjct: 429  SQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTDIKMECF 482


>ref|XP_006416405.1| hypothetical protein EUTSA_v10007426mg [Eutrema salsugineum]
            gi|557094176|gb|ESQ34758.1| hypothetical protein
            EUTSA_v10007426mg [Eutrema salsugineum]
          Length = 504

 Score =  513 bits (1322), Expect = e-143
 Identities = 285/560 (50%), Positives = 356/560 (63%)
 Frame = +3

Query: 102  MASEVAAAEVNAGKHLSSAAIADEEEKLRLLREAVNALPFNAVKDLWSIGACVRCIFRLF 281
            MA E+  A  ++   LS+  ++  + K   + E   +L   AVKDL S+G C RCIFRL 
Sbjct: 1    MADEMKPASGDSAG-LSNGLVSHGDYKTMRVYETARSLHPGAVKDLLSLGVCERCIFRLV 59

Query: 282  GLHELMCAHPSLSISKWCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSRETKFCKI 461
             +        S+S S     LE    + G+                     S  ++ C +
Sbjct: 60   AVESFDSDFSSVSTSTLRIWLESGDDETGLP-------------------ESSCSRICIV 100

Query: 462  CLGILQFLYNDDNGTSFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQAV 641
            CLGILQF+++D   T  K   + D+   I +LVKQ   + DSF LEVS+P  +TEN++AV
Sbjct: 101  CLGILQFVFSDAKQTLVKSDCSSDYVARITDLVKQDGHEFDSFGLEVSVPSTITENERAV 160

Query: 642  WLYMKNKYRHELWFQEKAECPFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSD 821
              Y+K KY +E W Q +      S KD LK+LV++PL+ LLG KS  SSF +RLTYS   
Sbjct: 161  LSYLKGKYSNEAWLQSEKN----SVKDALKVLVLDPLKTLLGAKSDSSSFHIRLTYSK-- 214

Query: 822  ALTRDDVQEXXXXXXXXXXXXXXDLKITGESVTPHVESSDSHIGDGPTKVRPKESQDLSC 1001
              T D+ Q                    G S T H             K R  + ++ S 
Sbjct: 215  --TLDEAQ--------------------GVSETTHER-----------KKRKTDEENGSN 241

Query: 1002 SYLMAQLDKVSKPCCLNIHCCRSSIYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEIVG 1181
            S      +KV +PC L++HC +  I+  GRY KYSRNVSQTRW+IDDERMGEASVEEI+G
Sbjct: 242  STPENSFEKVYEPCILSVHCNKMPIFFSGRYFKYSRNVSQTRWIIDDERMGEASVEEIIG 301

Query: 1182 GTILPIFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEGKINSLE 1361
            G ILP   GD+YKFHAAGREDIDVRMLG+GRPFL+E+QN+RQ PS+  + EIE KIN+ E
Sbjct: 302  GNILPACLGDSYKFHAAGREDIDVRMLGSGRPFLIEVQNSRQCPSQKSLTEIEEKINNSE 361

Query: 1362 SQYVRVKNLRAVGSQGWDLMREGESEKQKQYVALVWISRPVSDEDMQTISSLKELKVAQK 1541
             + V VK+LR +GSQ W +MREGESEKQKQY ALVWISR + ++D  +ISSLKELK+ QK
Sbjct: 362  KKLVGVKDLRFIGSQCWAMMREGESEKQKQYAALVWISRSLEEKDFNSISSLKELKILQK 421

Query: 1542 TPIRVLHRRSPLEREKIIHWMKVERISGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQPSI 1721
            TPIRVLHRRSPLERE+ IHWMKVE+I G+S Y LLHLCTQAGTYIKEFVHGD GRT P++
Sbjct: 422  TPIRVLHRRSPLERERTIHWMKVEKIKGNSHYFLLHLCTQAGTYIKEFVHGDLGRTTPNM 481

Query: 1722 GSILGCRTEILQLDVTDVKM 1781
            GSILGCR EI+QLDVTDVKM
Sbjct: 482  GSILGCRAEIIQLDVTDVKM 501


>ref|XP_006307295.1| hypothetical protein CARUB_v10008914mg [Capsella rubella]
            gi|482576006|gb|EOA40193.1| hypothetical protein
            CARUB_v10008914mg [Capsella rubella]
          Length = 504

 Score =  512 bits (1318), Expect = e-142
 Identities = 275/548 (50%), Positives = 351/548 (64%), Gaps = 3/548 (0%)
 Frame = +3

Query: 147  LSSAAIADEEEKLRLLREAVNALPFNAVKDLWSIGACVRCIFRLFGLHELMCAHPSLSIS 326
            L +  ++  + K R + E   +L   AVKDL S+G C RCIFRL  +        S+S S
Sbjct: 15   LPNGLVSHGDSKTRRVYETARSLHSGAVKDLLSLGVCERCIFRLVAVEAFDSDVSSVSTS 74

Query: 327  ---KWCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSRETKFCKICLGILQFLYNDD 497
                W + ++D                      ++    S  ++ C +CLGILQF+++D 
Sbjct: 75   ALRSWLNAVDD----------------------ETGSSESSCSRICIVCLGILQFVFSDA 112

Query: 498  NGTSFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQAVWLYMKNKYRHEL 677
                 K  ++ D+   I +LVKQ   + DSF LEVS+P  +T+N++AV  Y+K KY  E 
Sbjct: 113  EQKLVKADTSSDYVARITDLVKQDRHEFDSFGLEVSVPSTITDNERAVLSYLKGKYSDEG 172

Query: 678  WFQEKAECPFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSDALTRDDVQEXXX 857
            W Q       IS KD LK LV++PL+  LG +S  SSF +RLTYS +             
Sbjct: 173  WLQRDK----ISVKDALKFLVLDPLKASLGAQSDSSSFHIRLTYSEASD----------- 217

Query: 858  XXXXXXXXXXXDLKITGESVTPHVESSDSHIGDGPTKVRPKESQDLSCSYLMAQLDKVSK 1037
                         +  G S T H            +K R  ++++ S S      +KV +
Sbjct: 218  -------------EAPGVSKTTH-----------ESKRRKTDAENGSNSISENSFEKVYE 253

Query: 1038 PCCLNIHCCRSSIYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEIVGGTILPIFQGDNY 1217
            PC  ++HC +  I+  GRY KYSRNVSQ+RW+IDDERMGEASVEEI+GG ILP   GD+Y
Sbjct: 254  PCIFSVHCNKMPIFFSGRYFKYSRNVSQSRWIIDDERMGEASVEEILGGNILPACLGDSY 313

Query: 1218 KFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEGKINSLESQYVRVKNLRAV 1397
            KFHAAGREDIDVRMLG+GRPFL+E+QN+RQ PSE  +KEIE KIN+ E + V VK+L+ +
Sbjct: 314  KFHAAGREDIDVRMLGSGRPFLIEVQNSRQCPSEQSLKEIEEKINNSEKKLVGVKDLKCI 373

Query: 1398 GSQGWDLMREGESEKQKQYVALVWISRPVSDEDMQTISSLKELKVAQKTPIRVLHRRSPL 1577
            GSQ W +MREGE+EKQKQYVALVWISRP+ ++D  +ISSLKELK+ QKTP+RVLHRRSPL
Sbjct: 374  GSQCWAMMREGEAEKQKQYVALVWISRPLEEKDFNSISSLKELKILQKTPVRVLHRRSPL 433

Query: 1578 EREKIIHWMKVERISGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQPSIGSILGCRTEILQ 1757
            +REKIIHWMKV++I G SQY LLHLCTQAGTYIKEFVHGD GRT PS+GSILGCR EI+Q
Sbjct: 434  DREKIIHWMKVDKIKGHSQYFLLHLCTQAGTYIKEFVHGDLGRTTPSMGSILGCRAEIIQ 493

Query: 1758 LDVTDVKM 1781
            LDVTDVKM
Sbjct: 494  LDVTDVKM 501


>ref|XP_002893108.1| hypothetical protein ARALYDRAFT_889490 [Arabidopsis lyrata subsp.
            lyrata] gi|297338950|gb|EFH69367.1| hypothetical protein
            ARALYDRAFT_889490 [Arabidopsis lyrata subsp. lyrata]
          Length = 504

 Score =  505 bits (1300), Expect = e-140
 Identities = 272/545 (49%), Positives = 349/545 (64%)
 Frame = +3

Query: 147  LSSAAIADEEEKLRLLREAVNALPFNAVKDLWSIGACVRCIFRLFGLHELMCAHPSLSIS 326
            L +  ++  + K R + E   +L   AVKDL S+G C RCIFRL  +        S+S S
Sbjct: 15   LPNGLVSHGDSKTRRVYETARSLHSGAVKDLLSLGVCERCIFRLVAVEAFDSDISSVSTS 74

Query: 327  KWCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSRETKFCKICLGILQFLYNDDNGT 506
                 L+                DGE  + +S   R      C +CLGILQF+++D    
Sbjct: 75   TLHSWLKSG--------------DGETGSSESSCSR-----ICIVCLGILQFVFSDAKKE 115

Query: 507  SFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQAVWLYMKNKYRHELWFQ 686
              K  S+ D+   I +LVKQ   + DSF LEVS+P  + EN++A+  Y+K KY  E+W Q
Sbjct: 116  LVKSDSSSDYVSRITDLVKQDRHEFDSFGLEVSVPSTIMENERALLSYLKGKYSTEVWLQ 175

Query: 687  EKAECPFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSDALTRDDVQEXXXXXX 866
                    S KD LK+L+++ L+  LG +S  SSF +RLTY+ +     D+ Q       
Sbjct: 176  RDK----FSVKDALKVLLLDQLKASLGAESDSSSFHIRLTYTKAS----DEAQ------- 220

Query: 867  XXXXXXXXDLKITGESVTPHVESSDSHIGDGPTKVRPKESQDLSCSYLMAQLDKVSKPCC 1046
                         G S T H            +K R  ++++ S        +KV +PC 
Sbjct: 221  -------------GASETTH-----------ESKRRKTDAENGSNCISENSFEKVYEPCI 256

Query: 1047 LNIHCCRSSIYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEIVGGTILPIFQGDNYKFH 1226
             ++HC R  I+  GRY KYSRNVSQ+RW+IDDERMGEASVEEI+GG ILP   GD+YKFH
Sbjct: 257  FSVHCNRMPIFFSGRYFKYSRNVSQSRWIIDDERMGEASVEEILGGNILPACLGDSYKFH 316

Query: 1227 AAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEGKINSLESQYVRVKNLRAVGSQ 1406
            AAGREDIDVRMLG+GRPFL+E+QN+RQ PSE  +KE+E KIN+ E + V VK+L+ +GSQ
Sbjct: 317  AAGREDIDVRMLGSGRPFLIEVQNSRQCPSEQSLKEVEEKINNSEKKLVGVKDLKCIGSQ 376

Query: 1407 GWDLMREGESEKQKQYVALVWISRPVSDEDMQTISSLKELKVAQKTPIRVLHRRSPLERE 1586
             W +MREGE+EKQKQYVALVWISRP+ ++D  ++SSLKELK+ QKTP+RVLHRRSPL+RE
Sbjct: 377  CWAMMREGEAEKQKQYVALVWISRPLEEKDFNSVSSLKELKILQKTPVRVLHRRSPLDRE 436

Query: 1587 KIIHWMKVERISGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQPSIGSILGCRTEILQLDV 1766
            KIIHWMK+E+I G + Y LLHLCTQAGTYIKEFVHGD GRT PS+GSILGCR EI+QLDV
Sbjct: 437  KIIHWMKIEKIKGHAHYFLLHLCTQAGTYIKEFVHGDLGRTTPSMGSILGCRAEIIQLDV 496

Query: 1767 TDVKM 1781
            TDVKM
Sbjct: 497  TDVKM 501


>ref|NP_173466.2| Pseudouridine synthase family protein [Arabidopsis thaliana]
            gi|332191849|gb|AEE29970.1| Pseudouridine synthase family
            protein [Arabidopsis thaliana]
          Length = 504

 Score =  504 bits (1298), Expect = e-140
 Identities = 277/545 (50%), Positives = 349/545 (64%)
 Frame = +3

Query: 147  LSSAAIADEEEKLRLLREAVNALPFNAVKDLWSIGACVRCIFRLFGLHELMCAHPSLSIS 326
            L +  ++    K R + E   +L   AVKDL S+G C RCIFRL  +        S+S S
Sbjct: 15   LPNGLVSHGNSKTRRVYETARSLHTGAVKDLLSLGVCERCIFRLVSVEAFDSDISSVSTS 74

Query: 327  KWCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSRETKFCKICLGILQFLYNDDNGT 506
                 L                K G+  +E S  E S  T  C +CLGILQF+++D    
Sbjct: 75   TLRSWL----------------KSGD--DETSASESSCST-ICIVCLGILQFVFSDVKKE 115

Query: 507  SFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQAVWLYMKNKYRHELWFQ 686
              K  S+ D+   I +LVKQ   + DSF LEVS+P  + EN++A+  Y+K KY  E+W Q
Sbjct: 116  LVKSDSSSDYVARITDLVKQDRHEFDSFGLEVSVPSTIMENERALLSYLKGKYSTEVWLQ 175

Query: 687  EKAECPFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSDALTRDDVQEXXXXXX 866
                   IS KD LK+L+++ L+  LG +S  SSF +RLTY+ +     D+ Q       
Sbjct: 176  RDK----ISVKDALKVLLLDQLKASLGAESDSSSFHIRLTYTKAS----DEAQ------- 220

Query: 867  XXXXXXXXDLKITGESVTPHVESSDSHIGDGPTKVRPKESQDLSCSYLMAQLDKVSKPCC 1046
                         G S T H            +K R  ++++ S        +KV +PC 
Sbjct: 221  -------------GASETTH-----------ESKRRKTDAENGSNCISENSFEKVYEPCI 256

Query: 1047 LNIHCCRSSIYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEIVGGTILPIFQGDNYKFH 1226
             ++HC R  I+  GRY KYSRNVSQ+RW+IDDERMGEASVEEI+GG ILP   GD+YKFH
Sbjct: 257  FSVHCNRMPIFFSGRYFKYSRNVSQSRWIIDDERMGEASVEEILGGNILPACLGDSYKFH 316

Query: 1227 AAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEGKINSLESQYVRVKNLRAVGSQ 1406
            AAGREDIDVRMLG+GRPFL+E+QN+RQ+PSE  +KE+E KIN  E + V VK+L+ +GSQ
Sbjct: 317  AAGREDIDVRMLGSGRPFLIEVQNSRQLPSEQSLKEVEEKINKSEKKLVGVKDLKCIGSQ 376

Query: 1407 GWDLMREGESEKQKQYVALVWISRPVSDEDMQTISSLKELKVAQKTPIRVLHRRSPLERE 1586
             W +MREGE+EKQKQYVALVWISRP+ ++D  +IS LKELK+ QKTP+RVLHRRSPL+RE
Sbjct: 377  CWAMMREGEAEKQKQYVALVWISRPLEEKDFNSISCLKELKILQKTPVRVLHRRSPLDRE 436

Query: 1587 KIIHWMKVERISGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQPSIGSILGCRTEILQLDV 1766
            KIIHWMKVE+I G S Y LLHLCTQAGTYIKEFVHGD GRT PS+GSILGCR EI+QLDV
Sbjct: 437  KIIHWMKVEKIKGHSHYFLLHLCTQAGTYIKEFVHGDLGRTTPSMGSILGCRAEIIQLDV 496

Query: 1767 TDVKM 1781
            TDVKM
Sbjct: 497  TDVKM 501


>dbj|BAC43638.1| unknown protein [Arabidopsis thaliana] gi|29028890|gb|AAO64824.1|
            At1g20410 [Arabidopsis thaliana]
          Length = 504

 Score =  499 bits (1286), Expect = e-138
 Identities = 276/545 (50%), Positives = 347/545 (63%)
 Frame = +3

Query: 147  LSSAAIADEEEKLRLLREAVNALPFNAVKDLWSIGACVRCIFRLFGLHELMCAHPSLSIS 326
            L +  ++    K R + E   +L   AVKDL S+G C RCIFRL  +        S+S S
Sbjct: 15   LPNGLVSHGNSKTRRVYETARSLHTGAVKDLLSLGVCERCIFRLVSVEAFDSDISSVSTS 74

Query: 327  KWCDILEDAMRKKGVDTADHPHKDGEFSNEQSHQERSRETKFCKICLGILQFLYNDDNGT 506
                 L                K G+  +E S  E S  T  C +CLGILQF+++D    
Sbjct: 75   TLRSWL----------------KSGD--DETSASESSCST-ICIVCLGILQFVFSDVKKE 115

Query: 507  SFKKYSADDFALVIAELVKQQYQQIDSFSLEVSLPLAVTENDQAVWLYMKNKYRHELWFQ 686
              K  S+ D+   I +LVKQ   + +SF LEVS+P  + EN++A+  Y+K KY  E+W Q
Sbjct: 116  LVKSDSSSDYVARITDLVKQDRHEFNSFGLEVSVPSTIMENERALLSYLKGKYSTEVWLQ 175

Query: 687  EKAECPFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSDALTRDDVQEXXXXXX 866
                   IS KD LK+L+++ L+  LG +S  SSF +RLTY+ +     D+ Q       
Sbjct: 176  RDK----ISVKDALKVLLLDQLKASLGAESDSSSFHIRLTYTKAS----DEAQ------- 220

Query: 867  XXXXXXXXDLKITGESVTPHVESSDSHIGDGPTKVRPKESQDLSCSYLMAQLDKVSKPCC 1046
                         G S T H            +K R  ++++ S        +KV  PC 
Sbjct: 221  -------------GASETTH-----------ESKRRKTDAENGSNCISENSFEKVYGPCI 256

Query: 1047 LNIHCCRSSIYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEIVGGTILPIFQGDNYKFH 1226
             ++HC R  I+  GRY KYSRNVSQ+RW+IDDERMGEASVEEI+GG ILP   GD+YKFH
Sbjct: 257  FSVHCNRMPIFFSGRYFKYSRNVSQSRWIIDDERMGEASVEEILGGNILPACLGDSYKFH 316

Query: 1227 AAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEGKINSLESQYVRVKNLRAVGSQ 1406
            AAGREDIDVRMLG+GRPFL+E+QN+RQ+PSE  +KE+E KIN  E + V VK+L+ +GSQ
Sbjct: 317  AAGREDIDVRMLGSGRPFLIEVQNSRQLPSEQSLKEVEEKINKSEKKLVGVKDLKCIGSQ 376

Query: 1407 GWDLMREGESEKQKQYVALVWISRPVSDEDMQTISSLKELKVAQKTPIRVLHRRSPLERE 1586
             W +MREGE+EKQKQYVALVWISRP+ ++D  +IS LKELK+ QKTP+RVLHRRSPL+RE
Sbjct: 377  CWAMMREGEAEKQKQYVALVWISRPLEEKDFNSISCLKELKILQKTPVRVLHRRSPLDRE 436

Query: 1587 KIIHWMKVERISGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQPSIGSILGCRTEILQLDV 1766
            KIIHWMKVE+I G S Y LLHLCTQAGTYIKEFVHGD GRT PS GSILGCR EI+QLDV
Sbjct: 437  KIIHWMKVEKIKGHSHYFLLHLCTQAGTYIKEFVHGDLGRTTPSKGSILGCRAEIIQLDV 496

Query: 1767 TDVKM 1781
            TDVKM
Sbjct: 497  TDVKM 501