BLASTX nr result

ID: Atropa21_contig00015609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00015609
         (1164 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006346113.1| PREDICTED: E3 ubiquitin-protein ligase At1g6...   163   1e-37
ref|XP_004244025.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   155   3e-35
emb|CBI39785.3| unnamed protein product [Vitis vinifera]              105   3e-20
emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]   105   4e-20
ref|XP_006344901.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   103   1e-19
gb|EOY11947.1| RING/U-box domain-containing protein isoform 2 [T...   103   1e-19
gb|EOY11946.1| RING/U-box domain-containing protein isoform 1 [T...   103   1e-19
ref|XP_006474826.1| PREDICTED: E3 ubiquitin-protein ligase At1g1...   100   1e-18
ref|XP_006452654.1| hypothetical protein CICLE_v10008862mg [Citr...   100   1e-18
ref|XP_006452653.1| hypothetical protein CICLE_v10008862mg [Citr...   100   1e-18
gb|EXB97654.1| hypothetical protein L484_020203 [Morus notabilis]     100   1e-18
ref|XP_004251940.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...    99   3e-18
gb|EMJ06683.1| hypothetical protein PRUPE_ppa008150mg [Prunus pe...    97   1e-17
gb|EMJ06682.1| hypothetical protein PRUPE_ppa008150mg [Prunus pe...    97   1e-17
ref|XP_003617871.1| RING finger protein [Medicago truncatula] gi...    97   1e-17
ref|XP_003617870.1| RING finger protein [Medicago truncatula] gi...    97   1e-17
ref|XP_004491529.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    94   1e-16
ref|XP_006575716.1| PREDICTED: E3 ubiquitin-protein ligase At1g1...    92   3e-16
gb|ACU18237.1| unknown [Glycine max]                                   92   3e-16
ref|XP_004294914.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...    92   4e-16

>ref|XP_006346113.1| PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Solanum
           tuberosum]
          Length = 325

 Score =  163 bits (413), Expect = 1e-37
 Identities = 82/99 (82%), Positives = 90/99 (90%), Gaps = 6/99 (6%)
 Frame = -1

Query: 279 MSSRYFITTDSLCNSRIVVPERMDLDVRRTPPSSSS------FLIRMAIRISRSKIFSLL 118
           MSSRYFITTDSLCNSRI+ PERM+LDVRRTPPSSSS      FL+RMAIRISRS+ FS L
Sbjct: 1   MSSRYFITTDSLCNSRIIGPERMNLDVRRTPPSSSSSSSSSSFLVRMAIRISRSRCFSFL 60

Query: 117 RRIFHYQNGSRSQLGSNPFNSMTWMMMECIALSVQIIVT 1
           RR+FHYQNGSRS+LGSNPFNS+TWM+MECIALSVQIIVT
Sbjct: 61  RRVFHYQNGSRSELGSNPFNSVTWMIMECIALSVQIIVT 99


>ref|XP_004244025.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Solanum
           lycopersicum]
          Length = 329

 Score =  155 bits (392), Expect = 3e-35
 Identities = 79/103 (76%), Positives = 89/103 (86%), Gaps = 10/103 (9%)
 Frame = -1

Query: 279 MSSRYFITTDSLCNSRIVVPERMDLDVRRTPPSSSS----------FLIRMAIRISRSKI 130
           MS+RYFITTDSLC+SRI+ PER++LDVRRTPPSSSS          FLIRMAIRISRS+ 
Sbjct: 1   MSNRYFITTDSLCDSRIIGPERINLDVRRTPPSSSSSSSSSSSSSSFLIRMAIRISRSRC 60

Query: 129 FSLLRRIFHYQNGSRSQLGSNPFNSMTWMMMECIALSVQIIVT 1
           FS LRR+FHYQNGSRS+LGSNPFNS+TWM+ ECIALSVQIIVT
Sbjct: 61  FSFLRRVFHYQNGSRSELGSNPFNSVTWMITECIALSVQIIVT 103


>emb|CBI39785.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  105 bits (263), Expect = 3e-20
 Identities = 61/103 (59%), Positives = 71/103 (68%), Gaps = 13/103 (12%)
 Frame = -1

Query: 279 MSSRYFITTDSLCNSRIVVP---------ERMDLDVR----RTPPSSSSFLIRMAIRISR 139
           M++RYF   DSLCNS I V          +RM   VR    R PPSS  FLIR A+RISR
Sbjct: 1   MNTRYFFPPDSLCNSGISVSFSSLSPAGEDRMAAGVRNRSSRAPPSS--FLIRTAMRISR 58

Query: 138 SKIFSLLRRIFHYQNGSRSQLGSNPFNSMTWMMMECIALSVQI 10
           ++ FS LRR+FHYQNGSRS LG+NPFNS TWM++E IAL VQI
Sbjct: 59  ARWFSFLRRVFHYQNGSRSDLGANPFNSSTWMILEFIALVVQI 101


>emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
          Length = 343

 Score =  105 bits (262), Expect = 4e-20
 Identities = 61/103 (59%), Positives = 71/103 (68%), Gaps = 13/103 (12%)
 Frame = -1

Query: 279 MSSRYFITTDSLCNSRIVVP---------ERMDLDVR----RTPPSSSSFLIRMAIRISR 139
           M++RYF   DSLCNS I V          +RM   VR    R PPSS  FLIR A+RISR
Sbjct: 1   MNTRYFFPPDSLCNSGISVSFSSLSPAGEDRMAAGVRNRSSRAPPSS--FLIRTAMRISR 58

Query: 138 SKIFSLLRRIFHYQNGSRSQLGSNPFNSMTWMMMECIALSVQI 10
           ++ FS LRR+FHYQNGSRS LG+NPFNS TWM++E IAL VQI
Sbjct: 59  ARWFSFLRRVFHYQNGSRSDLGANPFNSNTWMILEFIALVVQI 101


>ref|XP_006344901.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Solanum
           tuberosum]
          Length = 354

 Score =  103 bits (257), Expect = 1e-19
 Identities = 61/111 (54%), Positives = 73/111 (65%), Gaps = 21/111 (18%)
 Frame = -1

Query: 270 RYFITTDSLCNSRIVV------PERMDLDV--------------RRTPPSSSSFLIRMAI 151
           RYF+T  SLC+S IVV      P    + V              R +    SSFLIRMA+
Sbjct: 5   RYFLTPISLCHSSIVVSFPSISPSTTAVSVGGSNYAGGNRNRYTRASNIPDSSFLIRMAM 64

Query: 150 RISRSKIFSLLRRIFHYQNG-SRSQLGSNPFNSMTWMMMECIALSVQIIVT 1
           RISR+K F  LRR+FHYQNG SRS LGSNPFNS+TWMMMECI+LS+QII++
Sbjct: 65  RISRAKWFIFLRRVFHYQNGYSRSDLGSNPFNSITWMMMECISLSIQIILS 115


>gb|EOY11947.1| RING/U-box domain-containing protein isoform 2 [Theobroma cacao]
          Length = 343

 Score =  103 bits (257), Expect = 1e-19
 Identities = 56/104 (53%), Positives = 69/104 (66%), Gaps = 11/104 (10%)
 Frame = -1

Query: 279 MSSRYFITTDSLCNSRIVVP---------ERMDLDVRRTPPSS--SSFLIRMAIRISRSK 133
           M++RY    DSLCNS   V          +RM    R   P +  SS LIRMA+RISR++
Sbjct: 1   MNTRYSFQPDSLCNSSTAVSYSSNPPGGEDRMAAGARNRSPRAPPSSLLIRMAMRISRAR 60

Query: 132 IFSLLRRIFHYQNGSRSQLGSNPFNSMTWMMMECIALSVQIIVT 1
            F+ LRR+FHYQNGSRS LGSNPFNS TWMM+E +AL +QI +T
Sbjct: 61  WFTFLRRVFHYQNGSRSDLGSNPFNSSTWMMLEFLALVIQISIT 104


>gb|EOY11946.1| RING/U-box domain-containing protein isoform 1 [Theobroma cacao]
          Length = 346

 Score =  103 bits (257), Expect = 1e-19
 Identities = 56/104 (53%), Positives = 69/104 (66%), Gaps = 11/104 (10%)
 Frame = -1

Query: 279 MSSRYFITTDSLCNSRIVVP---------ERMDLDVRRTPPSS--SSFLIRMAIRISRSK 133
           M++RY    DSLCNS   V          +RM    R   P +  SS LIRMA+RISR++
Sbjct: 1   MNTRYSFQPDSLCNSSTAVSYSSNPPGGEDRMAAGARNRSPRAPPSSLLIRMAMRISRAR 60

Query: 132 IFSLLRRIFHYQNGSRSQLGSNPFNSMTWMMMECIALSVQIIVT 1
            F+ LRR+FHYQNGSRS LGSNPFNS TWMM+E +AL +QI +T
Sbjct: 61  WFTFLRRVFHYQNGSRSDLGSNPFNSSTWMMLEFLALVIQISIT 104


>ref|XP_006474826.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Citrus
           sinensis]
          Length = 336

 Score =  100 bits (249), Expect = 1e-18
 Identities = 53/101 (52%), Positives = 67/101 (66%), Gaps = 9/101 (8%)
 Frame = -1

Query: 279 MSSRYFITTDSLCNSRIVVP---------ERMDLDVRRTPPSSSSFLIRMAIRISRSKIF 127
           M++RY   +DSLCNS   VP         +RM  +       + SFLIR A+RISR++ F
Sbjct: 1   MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWF 60

Query: 126 SLLRRIFHYQNGSRSQLGSNPFNSMTWMMMECIALSVQIIV 4
           + LRR+FHYQNGSRS LGSNPFNS TWM +E +AL VQI +
Sbjct: 61  NFLRRVFHYQNGSRSDLGSNPFNSSTWMALELLALLVQISI 101


>ref|XP_006452654.1| hypothetical protein CICLE_v10008862mg [Citrus clementina]
           gi|557555880|gb|ESR65894.1| hypothetical protein
           CICLE_v10008862mg [Citrus clementina]
          Length = 336

 Score =  100 bits (249), Expect = 1e-18
 Identities = 53/101 (52%), Positives = 67/101 (66%), Gaps = 9/101 (8%)
 Frame = -1

Query: 279 MSSRYFITTDSLCNSRIVVP---------ERMDLDVRRTPPSSSSFLIRMAIRISRSKIF 127
           M++RY   +DSLCNS   VP         +RM  +       + SFLIR A+RISR++ F
Sbjct: 1   MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWF 60

Query: 126 SLLRRIFHYQNGSRSQLGSNPFNSMTWMMMECIALSVQIIV 4
           + LRR+FHYQNGSRS LGSNPFNS TWM +E +AL VQI +
Sbjct: 61  NFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISI 101


>ref|XP_006452653.1| hypothetical protein CICLE_v10008862mg [Citrus clementina]
           gi|557555879|gb|ESR65893.1| hypothetical protein
           CICLE_v10008862mg [Citrus clementina]
          Length = 296

 Score =  100 bits (249), Expect = 1e-18
 Identities = 53/101 (52%), Positives = 67/101 (66%), Gaps = 9/101 (8%)
 Frame = -1

Query: 279 MSSRYFITTDSLCNSRIVVP---------ERMDLDVRRTPPSSSSFLIRMAIRISRSKIF 127
           M++RY   +DSLCNS   VP         +RM  +       + SFLIR A+RISR++ F
Sbjct: 1   MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWF 60

Query: 126 SLLRRIFHYQNGSRSQLGSNPFNSMTWMMMECIALSVQIIV 4
           + LRR+FHYQNGSRS LGSNPFNS TWM +E +AL VQI +
Sbjct: 61  NFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISI 101


>gb|EXB97654.1| hypothetical protein L484_020203 [Morus notabilis]
          Length = 456

 Score =  100 bits (248), Expect = 1e-18
 Identities = 56/107 (52%), Positives = 69/107 (64%), Gaps = 14/107 (13%)
 Frame = -1

Query: 279 MSSRYFITTDSLCNSRIVVPERMDLDV------------RRTPPSSSSFLIRMAIRISRS 136
           M++RYFI +DSLCNS   +       V             R P +  S LIRMA+R+SR+
Sbjct: 1   MNTRYFIPSDSLCNSINTISIFSSSSVTGGDRIPATTARNRAPRAPPSLLIRMAMRVSRA 60

Query: 135 KIFSLLRRIFHYQNGS--RSQLGSNPFNSMTWMMMECIALSVQIIVT 1
           + F+ LRR+FHYQNGS  RS LGSNPFNS TWMM+E IAL VQI +T
Sbjct: 61  RWFTFLRRVFHYQNGSGSRSDLGSNPFNSSTWMMLELIALLVQISIT 107


>ref|XP_004251940.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Solanum
           lycopersicum]
          Length = 358

 Score = 99.0 bits (245), Expect = 3e-18
 Identities = 59/114 (51%), Positives = 71/114 (62%), Gaps = 24/114 (21%)
 Frame = -1

Query: 270 RYFITTDSLCNSRIVVP-----------------------ERMDLDVRRTPPSSSSFLIR 160
           RYF+T  SLC+S IVV                           +   R +  S SS LIR
Sbjct: 5   RYFLTPISLCHSSIVVSFPSISPSSTTAAAVAVGGGDYAVGNRNRYSRASNISDSSVLIR 64

Query: 159 MAIRISRSKIFSLLRRIFHYQNG-SRSQLGSNPFNSMTWMMMECIALSVQIIVT 1
           MA+RISR+K F  LRR+FHYQNG SRS LGSNPFNS+TWMMMECI+LS+QII++
Sbjct: 65  MAMRISRAKWFIFLRRVFHYQNGYSRSDLGSNPFNSITWMMMECISLSIQIILS 118


>gb|EMJ06683.1| hypothetical protein PRUPE_ppa008150mg [Prunus persica]
          Length = 343

 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 55/105 (52%), Positives = 69/105 (65%), Gaps = 12/105 (11%)
 Frame = -1

Query: 279 MSSRYFITTDSLCNSRIVV---------PERMDLDVRRTPPSS---SSFLIRMAIRISRS 136
           M++RY   ++ +CNS              +R  + V RT  S    SSFL+RMA+RISR+
Sbjct: 1   MNTRYLFPSEPMCNSAGSAVSFSSTSPGDDRTAVSVIRTRSSRAPPSSFLMRMAMRISRA 60

Query: 135 KIFSLLRRIFHYQNGSRSQLGSNPFNSMTWMMMECIALSVQIIVT 1
           + F  LRR+FHYQNGSRS LGSNPFNS TWMM+E IAL VQI +T
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMLEFIALVVQISIT 105


>gb|EMJ06682.1| hypothetical protein PRUPE_ppa008150mg [Prunus persica]
          Length = 330

 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 55/105 (52%), Positives = 69/105 (65%), Gaps = 12/105 (11%)
 Frame = -1

Query: 279 MSSRYFITTDSLCNSRIVV---------PERMDLDVRRTPPSS---SSFLIRMAIRISRS 136
           M++RY   ++ +CNS              +R  + V RT  S    SSFL+RMA+RISR+
Sbjct: 1   MNTRYLFPSEPMCNSAGSAVSFSSTSPGDDRTAVSVIRTRSSRAPPSSFLMRMAMRISRA 60

Query: 135 KIFSLLRRIFHYQNGSRSQLGSNPFNSMTWMMMECIALSVQIIVT 1
           + F  LRR+FHYQNGSRS LGSNPFNS TWMM+E IAL VQI +T
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMLEFIALVVQISIT 105


>ref|XP_003617871.1| RING finger protein [Medicago truncatula]
           gi|355519206|gb|AET00830.1| RING finger protein
           [Medicago truncatula]
          Length = 340

 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 53/97 (54%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
 Frame = -1

Query: 279 MSSRYFITTDSLC--NSRIVVPERMDLDVRRTPP--SSSSFLIRMAIRISRSKIFSLLRR 112
           M+SR  + ++S+   +S     E   +  R  P   SS SF +RMA+RISRS+ F+LLRR
Sbjct: 1   MNSRCLLNSNSIVQSSSNSETREERVVSSRNRPQHASSPSFSVRMAMRISRSRWFTLLRR 60

Query: 111 IFHYQNGSRSQLGSNPFNSMTWMMMECIALSVQIIVT 1
           +FHYQNGSRS LGSNPFNS TW+MME IAL +QII++
Sbjct: 61  VFHYQNGSRSNLGSNPFNSSTWLMMEFIALIIQIIIS 97


>ref|XP_003617870.1| RING finger protein [Medicago truncatula]
           gi|355519205|gb|AET00829.1| RING finger protein
           [Medicago truncatula]
          Length = 337

 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 53/97 (54%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
 Frame = -1

Query: 279 MSSRYFITTDSLC--NSRIVVPERMDLDVRRTPP--SSSSFLIRMAIRISRSKIFSLLRR 112
           M+SR  + ++S+   +S     E   +  R  P   SS SF +RMA+RISRS+ F+LLRR
Sbjct: 1   MNSRCLLNSNSIVQSSSNSETREERVVSSRNRPQHASSPSFSVRMAMRISRSRWFTLLRR 60

Query: 111 IFHYQNGSRSQLGSNPFNSMTWMMMECIALSVQIIVT 1
           +FHYQNGSRS LGSNPFNS TW+MME IAL +QII++
Sbjct: 61  VFHYQNGSRSNLGSNPFNSSTWLMMEFIALIIQIIIS 97


>ref|XP_004491529.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           At1g63170-like [Cicer arietinum]
          Length = 333

 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 4/86 (4%)
 Frame = -1

Query: 246 LCNSRIVVPERMDLDVRRTPP----SSSSFLIRMAIRISRSKIFSLLRRIFHYQNGSRSQ 79
           L NS  +V     +   RT P    S  SF +RMA+RISRS+ F+ LRRIFHYQNGSRS 
Sbjct: 6   LLNSNSIVQXEDSMASSRTRPQRASSPPSFSVRMAMRISRSRWFTFLRRIFHYQNGSRSN 65

Query: 78  LGSNPFNSMTWMMMECIALSVQIIVT 1
           LGSNPFNS TWMM+E IAL  QI+++
Sbjct: 66  LGSNPFNSSTWMMLEFIALISQIVIS 91


>ref|XP_006575716.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
          Length = 303

 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = -1

Query: 198 RRTPPSSSSFLIRMAIRISRSKIFSLLRRIFHYQNGSRSQLGSNPFNSMTWMMMECIALS 19
           R TPPS   FL+R+A+RISR++ F+ LRR+FHYQNGSRS LGSNPFNS TWMM+E IAL 
Sbjct: 38  RVTPPS---FLVRIAMRISRARWFTFLRRVFHYQNGSRSNLGSNPFNSSTWMMLEFIALI 94

Query: 18  VQIIVT 1
           +QI +T
Sbjct: 95  LQITIT 100


>gb|ACU18237.1| unknown [Glycine max]
          Length = 365

 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = -1

Query: 198 RRTPPSSSSFLIRMAIRISRSKIFSLLRRIFHYQNGSRSQLGSNPFNSMTWMMMECIALS 19
           R TPPS   FL+R+A+RISR++ F+ LRR+FHYQNGSRS LGSNPFNS TWMM+E IAL 
Sbjct: 38  RVTPPS---FLVRIAMRISRARWFTFLRRVFHYQNGSRSNLGSNPFNSSTWMMLEFIALI 94

Query: 18  VQIIVT 1
           +QI +T
Sbjct: 95  LQITIT 100


>ref|XP_004294914.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Fragaria
           vesca subsp. vesca]
          Length = 329

 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 44/66 (66%), Positives = 54/66 (81%)
 Frame = -1

Query: 198 RRTPPSSSSFLIRMAIRISRSKIFSLLRRIFHYQNGSRSQLGSNPFNSMTWMMMECIALS 19
           R + P  S+FL+RMA+RISR++ F+ LRR+FHYQNGSRS LGSNPFNS TWM +E IAL 
Sbjct: 27  RSSRPLPSTFLMRMAMRISRARWFTFLRRVFHYQNGSRSDLGSNPFNSTTWMTLEFIALV 86

Query: 18  VQIIVT 1
           VQI +T
Sbjct: 87  VQISIT 92


Top