BLASTX nr result
ID: Atropa21_contig00015230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00015230
(683 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 352 e-106
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 341 e-104
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 345 e-104
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 268 8e-76
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici... 263 8e-75
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 265 1e-74
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 266 3e-74
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 266 7e-74
gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus... 266 9e-74
gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobro... 269 3e-73
ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 264 6e-73
gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus pe... 267 6e-73
ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 264 6e-73
ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 261 5e-72
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 259 3e-71
ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago trunc... 257 1e-70
ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutr... 253 2e-70
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 255 6e-70
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 252 2e-69
gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlise... 252 2e-69
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 352 bits (902), Expect(2) = e-106
Identities = 180/208 (86%), Positives = 186/208 (89%), Gaps = 3/208 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALN K
Sbjct: 842 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNSK 901
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CL+LAT HSMAVDFAKTG AAEMP FLKPREFPDFMER D+ MYISEGVLGKLYRGV+ S
Sbjct: 902 CLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVIKS 961
Query: 362 IVCRNSDDLCT---IQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
+ RNSDDL T IQDAYD DLLVEGYEAFIE K HKEMYLD MNSLLNYYGAEKEVE
Sbjct: 962 YIRRNSDDLSTDRAIQDAYDHDLLVEGYEAFIETAKTHKEMYLDSMNSLLNYYGAEKEVE 1021
Query: 533 ILTGNLRQKSVYLQRDNRRYCILN*KIV 616
ILTGNLRQKSVYLQRDNRRY L +I+
Sbjct: 1022 ILTGNLRQKSVYLQRDNRRYFELKDRIL 1049
Score = 59.3 bits (142), Expect(2) = e-106
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCKE 681
YFELKDRILVSAKSL KEVKGWF+GCC E
Sbjct: 1041 YFELKDRILVSAKSLHKEVKGWFSGCCTE 1069
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 341 bits (874), Expect(2) = e-104
Identities = 175/208 (84%), Positives = 184/208 (88%), Gaps = 3/208 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
QTVTPMDYTGRR RIMDHEVTL+EIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK
Sbjct: 843 QTVTPMDYTGRRTRIMDHEVTLQEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 902
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CL+LAT HSMAVDFAKTG AAEMP FLKPREFPDF+ER D+ MYISEGVLGKLYR +VNS
Sbjct: 903 CLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLYRAIVNS 962
Query: 362 IVCRNSDDLCT---IQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
V NSDDL + IQDAYD LL +GYEAFIE KNHKE YLDRMNSLLNYYGAEKEVE
Sbjct: 963 SVRSNSDDLGSVRAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYGAEKEVE 1022
Query: 533 ILTGNLRQKSVYLQRDNRRYCILN*KIV 616
ILTGNLRQKSVYLQRDNRRY L +I+
Sbjct: 1023 ILTGNLRQKSVYLQRDNRRYFELKDRIL 1050
Score = 65.1 bits (157), Expect(2) = e-104
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCKE 681
YFELKDRILVSAKSLQKEVKGWFTGCCKE
Sbjct: 1042 YFELKDRILVSAKSLQKEVKGWFTGCCKE 1070
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum]
Length = 1119
Score = 345 bits (884), Expect(2) = e-104
Identities = 177/208 (85%), Positives = 183/208 (87%), Gaps = 3/208 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALN K
Sbjct: 842 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNSK 901
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CL+LAT HSMAVDFAKTG AAEMP FLKPREFPDFMER D+ MYISEGVLGKLYRGV+ S
Sbjct: 902 CLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVMKS 961
Query: 362 IVCRNSDDLC---TIQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
+ RNSDDL IQDAYD DLLVEGYEAF E K HK MYLD MNSLLNYYGAEKEVE
Sbjct: 962 YIRRNSDDLSADRAIQDAYDHDLLVEGYEAFTETAKTHKAMYLDSMNSLLNYYGAEKEVE 1021
Query: 533 ILTGNLRQKSVYLQRDNRRYCILN*KIV 616
ILTGNLRQKSVYLQRDNRRY L +I+
Sbjct: 1022 ILTGNLRQKSVYLQRDNRRYFELKDRIL 1049
Score = 59.3 bits (142), Expect(2) = e-104
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCKE 681
YFELKDRILVSAKSL KEVKGWFT CC+E
Sbjct: 1041 YFELKDRILVSAKSLHKEVKGWFTSCCQE 1069
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 268 bits (686), Expect(2) = 8e-76
Identities = 139/208 (66%), Positives = 162/208 (77%), Gaps = 3/208 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
QT PMDYT RRPRIMDH+VTLEEIQ+FFVDYMI+DTLG ISTAHLVHADREP+KA + K
Sbjct: 840 QTEAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVISTAHLVHADREPEKARSKK 899
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CLELAT HSMAVDFAKTG AEMP LKP+EFPDFMER D+ MYIS G LGKLYR + S
Sbjct: 900 CLELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLYRATIAS 959
Query: 362 IVCRNSDDLC--TIQD-AYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
V S + TI AYD DL V+G+E F+E K HKEMY ++M +L+N+YGAE E E
Sbjct: 960 RVNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGAESEDE 1019
Query: 533 ILTGNLRQKSVYLQRDNRRYCILN*KIV 616
+LTGNLR K +YLQRDNRR+ + +I+
Sbjct: 1020 MLTGNLRNKLMYLQRDNRRFTEMKDRIL 1047
Score = 42.4 bits (98), Expect(2) = 8e-76
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCK 678
+ E+KDRIL+S KSLQKE K W G CK
Sbjct: 1039 FTEMKDRILISVKSLQKEAKEWLYGSCK 1066
>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 983
Score = 263 bits (673), Expect(2) = 8e-75
Identities = 131/200 (65%), Positives = 162/200 (81%), Gaps = 3/200 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
+T +PMDY GRRPR MDH+VTLEEIQ+FF+DYMI+DTLGAISTAHLVHADREPDKA + K
Sbjct: 690 ETESPMDYQGRRPRKMDHDVTLEEIQKFFIDYMINDTLGAISTAHLVHADREPDKARSSK 749
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CL+LA HSMAVDFAKTG AEMP LKP+EFPDFMER D+ MYIS GVLGKLYRG ++S
Sbjct: 750 CLQLAELHSMAVDFAKTGAPAEMPKALKPKEFPDFMERIDKKMYISGGVLGKLYRGTLDS 809
Query: 362 IVCRNSDDLCT---IQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
+ S + T + YD DL V+G+E F+E +HK+MY+++++ L++YY A+KE E
Sbjct: 810 TRQQRSKFVWTENIAEATYDHDLEVKGFEEFVEIAISHKDMYVEKLSGLMDYYEAKKEDE 869
Query: 533 ILTGNLRQKSVYLQRDNRRY 592
ILTGNL+ K++YLQRDNRRY
Sbjct: 870 ILTGNLQNKAMYLQRDNRRY 889
Score = 43.9 bits (102), Expect(2) = 8e-75
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCK 678
Y + KDRIL+S KSLQKE K WF CC+
Sbjct: 889 YGDTKDRILISVKSLQKEAKEWFESCCQ 916
>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
Length = 1131
Score = 265 bits (676), Expect(2) = 1e-74
Identities = 134/200 (67%), Positives = 160/200 (80%), Gaps = 3/200 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
+T PMDYTGRR RIMDH+VTLEEI +FFVDYMI+DTLGAISTAHLVHADR+PDKA + K
Sbjct: 856 ETEPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMINDTLGAISTAHLVHADRDPDKARSSK 915
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CL LAT HSMAVDFAKTG AEMP LKP+EFPDFMER D+ YIS GVLGKLYR ++S
Sbjct: 916 CLHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFMEREDKPRYISFGVLGKLYRATLDS 975
Query: 362 IVCRNSDDLCT---IQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
I+ S+ + + + +YD DL V+G+EAF+ ++HKEMY + MN+L+NYYGA E E
Sbjct: 976 IMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAESHKEMYEEEMNALMNYYGASTEDE 1035
Query: 533 ILTGNLRQKSVYLQRDNRRY 592
ILTGNLR ++ YLQRDNRRY
Sbjct: 1036 ILTGNLRNRASYLQRDNRRY 1055
Score = 42.0 bits (97), Expect(2) = 1e-74
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCKE 681
Y ++KDRIL+SAK+LQ E K WF CKE
Sbjct: 1055 YGDMKDRILLSAKNLQNEAKEWFGSSCKE 1083
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus]
Length = 1117
Score = 266 bits (681), Expect(2) = 3e-74
Identities = 136/200 (68%), Positives = 159/200 (79%), Gaps = 3/200 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
+T PMDYTGRRPRIMDH+V LEEIQ+FFVDYMI+DTLGAISTAHLVHADREP KAL+ K
Sbjct: 840 KTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAK 899
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CLELA HSMAVDFAKTG AEMP LKPREFPDFMER D+ MYIS VLGKLYR V S
Sbjct: 900 CLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKS 959
Query: 362 IVCRNSDDLCTIQDA---YDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
I S + + + A YD DL V+G+EAF+E + +KEMY+++M+ L+NYYGAE E E
Sbjct: 960 IEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDE 1019
Query: 533 ILTGNLRQKSVYLQRDNRRY 592
IL G+LR ++ YLQRDNR+Y
Sbjct: 1020 ILMGDLRSRASYLQRDNRKY 1039
Score = 38.9 bits (89), Expect(2) = 3e-74
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCC 675
Y ++KDRIL+S K+L+KEVK WF C
Sbjct: 1039 YGDMKDRILLSVKNLRKEVKEWFENSC 1065
>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
Length = 1122
Score = 266 bits (681), Expect(2) = 7e-74
Identities = 135/200 (67%), Positives = 159/200 (79%), Gaps = 3/200 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
QT PMDYTGRRPRIMDH+VTLEEI +FFVDYMI+DTLGAISTAHLVHADREP+KA + K
Sbjct: 846 QTDNPMDYTGRRPRIMDHKVTLEEIHQFFVDYMINDTLGAISTAHLVHADREPEKARSRK 905
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CLELA HSMAVDFAKTG AEMP LKPREFPDFMER D+ MYIS GVLGKLYR +V S
Sbjct: 906 CLELAELHSMAVDFAKTGAPAEMPRALKPREFPDFMERFDKPMYISNGVLGKLYRALVES 965
Query: 362 IVCRNSDDLCT---IQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
S+ + + ++AYD L V G+EAF+E +HKEMY +M+SL+++Y AE E E
Sbjct: 966 TTQVRSNIVLSEKFAEEAYDHQLEVNGFEAFLETASSHKEMYAQKMSSLMSFYDAETEDE 1025
Query: 533 ILTGNLRQKSVYLQRDNRRY 592
+LTGNL+ ++ YLQRDNRRY
Sbjct: 1026 MLTGNLQNRASYLQRDNRRY 1045
Score = 37.7 bits (86), Expect(2) = 7e-74
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCK 678
Y ++KDRIL+S K LQ+E K WF C+
Sbjct: 1045 YGDMKDRILISVKDLQREAKEWFESDCQ 1072
>gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris]
Length = 1119
Score = 266 bits (681), Expect(2) = 9e-74
Identities = 134/200 (67%), Positives = 158/200 (79%), Gaps = 3/200 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
QT PMDYTGRRPRIMDH+VTLEEIQ FFVDYMI+DTLGAISTAHLVHADREPDKA + K
Sbjct: 842 QTEAPMDYTGRRPRIMDHKVTLEEIQHFFVDYMINDTLGAISTAHLVHADREPDKAKSRK 901
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CLELA HSMAVDFAKTG A MP LKPREFPDFMER ++ MYIS+GVLGKLYR ++ S
Sbjct: 902 CLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVEKPMYISKGVLGKLYRAIIES 961
Query: 362 IVCRNSDDLCT---IQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
+ + + ++AYD L V G+EAF+E +HKEMY +M+SL+N+YGAE E E
Sbjct: 962 QMQIKYSFVWSEKLAEEAYDRSLEVNGFEAFLETASSHKEMYAQKMSSLMNFYGAETEDE 1021
Query: 533 ILTGNLRQKSVYLQRDNRRY 592
+L GNL+ ++ YLQRDNRRY
Sbjct: 1022 MLLGNLQNRASYLQRDNRRY 1041
Score = 37.4 bits (85), Expect(2) = 9e-74
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCK 678
Y ++KDRIL+S K+LQ+E K WF C+
Sbjct: 1041 YGDMKDRILLSVKNLQREAKEWFETSCQ 1068
>gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
Length = 1149
Score = 269 bits (688), Expect(2) = 3e-73
Identities = 137/200 (68%), Positives = 157/200 (78%), Gaps = 3/200 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
QT PMDYTG RPRIMDHEVTLEEIQ+FFVDYMI+DTLGAISTAHLVHADREPDKA + K
Sbjct: 848 QTDAPMDYTGSRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDKARSEK 907
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CLELAT HSMAVDFAKTG AEMP LKPREFPDFM+R D+ MY S GVLGKLYR +NS
Sbjct: 908 CLELATLHSMAVDFAKTGAPAEMPRSLKPREFPDFMQRVDKPMYASLGVLGKLYRATINS 967
Query: 362 IVCRNSDDLCTIQDA---YDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
V S + + + A YD DL V G+EAF+ + HK+MY ++M+ L+NYY E E E
Sbjct: 968 TVQERSKFVWSKKMAEALYDHDLEVNGFEAFLSTAQTHKDMYEEKMSFLMNYYEVESEDE 1027
Query: 533 ILTGNLRQKSVYLQRDNRRY 592
ILTGN+R K+ +LQRDNRRY
Sbjct: 1028 ILTGNMRNKATFLQRDNRRY 1047
Score = 32.7 bits (73), Expect(2) = 3e-73
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCK 678
Y ++KDRIL+S K+LQ+E + F CK
Sbjct: 1047 YGDMKDRILLSMKNLQREARERFENSCK 1074
>ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine
max]
Length = 1121
Score = 264 bits (674), Expect(2) = 6e-73
Identities = 133/200 (66%), Positives = 158/200 (79%), Gaps = 3/200 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
QT PMDYTGRRPRIMDH+VTLEEIQ+FFVDYMI+DTLGAISTAHLVHADRE DKA + K
Sbjct: 844 QTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMINDTLGAISTAHLVHADREQDKAKSRK 903
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CLELA HSMAVDFAKTG A MP LKPREFPDFMER D+ MYIS+GVLGKLYR ++ S
Sbjct: 904 CLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVDKPMYISKGVLGKLYRAIIES 963
Query: 362 IVCRNSDDLCT---IQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
+ + + ++AYD L V G+EAF+E HKEMY ++M+SL+++YGAE E E
Sbjct: 964 QMQIRYSFVWSEKHAEEAYDRSLEVNGFEAFLETASTHKEMYAEKMSSLMDFYGAETEDE 1023
Query: 533 ILTGNLRQKSVYLQRDNRRY 592
+L GNL+ ++ YLQRDNRRY
Sbjct: 1024 MLLGNLQNRASYLQRDNRRY 1043
Score = 37.4 bits (85), Expect(2) = 6e-73
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCK 678
Y ++KDRIL+S K+LQ+E K WF C+
Sbjct: 1043 YGDMKDRILLSVKNLQREAKEWFETSCE 1070
>gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 267 bits (682), Expect(2) = 6e-73
Identities = 133/199 (66%), Positives = 158/199 (79%), Gaps = 3/199 (1%)
Frame = +2
Query: 5 TVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPKC 184
TV PMDY+ RRPRIMDH VTLEEIQ+FFVDYMI+D LGAISTAHLVHAD EPDKALNPKC
Sbjct: 842 TVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAISTAHLVHADHEPDKALNPKC 901
Query: 185 LELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNSI 364
L+LA HSMAVDFAKTG AEM LKP+EFPDFMER D+ MYIS G LGKLYR VV S+
Sbjct: 902 LQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLYRAVVGSV 961
Query: 365 VCRNSDDLCTIQ---DAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVEI 535
+ ++ + + Q AYD DL V+G E+ +E K H++MY+++M +++NYYGA E EI
Sbjct: 962 LQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDMYIEKMRTMMNYYGAVTEDEI 1021
Query: 536 LTGNLRQKSVYLQRDNRRY 592
LTGNLR ++ YLQRDNRRY
Sbjct: 1022 LTGNLRNRAAYLQRDNRRY 1040
Score = 34.3 bits (77), Expect(2) = 6e-73
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCC 675
Y ++KDRI +S K+LQKE KG F C
Sbjct: 1040 YGDMKDRISLSLKNLQKEAKGLFESSC 1066
>ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X2 [Glycine
max]
Length = 941
Score = 264 bits (674), Expect(2) = 6e-73
Identities = 133/200 (66%), Positives = 158/200 (79%), Gaps = 3/200 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
QT PMDYTGRRPRIMDH+VTLEEIQ+FFVDYMI+DTLGAISTAHLVHADRE DKA + K
Sbjct: 664 QTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMINDTLGAISTAHLVHADREQDKAKSRK 723
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CLELA HSMAVDFAKTG A MP LKPREFPDFMER D+ MYIS+GVLGKLYR ++ S
Sbjct: 724 CLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVDKPMYISKGVLGKLYRAIIES 783
Query: 362 IVCRNSDDLCT---IQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
+ + + ++AYD L V G+EAF+E HKEMY ++M+SL+++YGAE E E
Sbjct: 784 QMQIRYSFVWSEKHAEEAYDRSLEVNGFEAFLETASTHKEMYAEKMSSLMDFYGAETEDE 843
Query: 533 ILTGNLRQKSVYLQRDNRRY 592
+L GNL+ ++ YLQRDNRRY
Sbjct: 844 MLLGNLQNRASYLQRDNRRY 863
Score = 37.4 bits (85), Expect(2) = 6e-73
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCK 678
Y ++KDRIL+S K+LQ+E K WF C+
Sbjct: 863 YGDMKDRILLSVKNLQREAKEWFETSCE 890
>ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Glycine max]
Length = 1120
Score = 261 bits (666), Expect(2) = 5e-72
Identities = 131/200 (65%), Positives = 157/200 (78%), Gaps = 3/200 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
QT PMDYTGRRPRIMDH+VTLEEIQ+FFVDYMI+DTLGAISTAHLVHADRE DKA + K
Sbjct: 843 QTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMINDTLGAISTAHLVHADREQDKAKSRK 902
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CLELA HSMAVDFAKTG A MP LKPREFPDFMER D+ MYIS+GVLGKLY ++ S
Sbjct: 903 CLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVDKPMYISKGVLGKLYHAIIES 962
Query: 362 IVCRNSDDLCT---IQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
+ + + ++AYD L V G+EAF+E HKEMY ++M+SL+++YGAE E E
Sbjct: 963 QMQIRYSFVWSEKHAEEAYDRSLEVNGFEAFLETASTHKEMYAEKMSSLMDFYGAETEDE 1022
Query: 533 ILTGNLRQKSVYLQRDNRRY 592
+L GN++ ++ YLQRDNRRY
Sbjct: 1023 MLLGNVQNRASYLQRDNRRY 1042
Score = 37.4 bits (85), Expect(2) = 5e-72
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCK 678
Y ++KDRIL+S K+LQ+E K WF C+
Sbjct: 1042 YGDMKDRILLSVKNLQREAKEWFETSCQ 1069
>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 259 bits (662), Expect(2) = 3e-71
Identities = 136/208 (65%), Positives = 157/208 (75%), Gaps = 3/208 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
QT PMDYTGRRPRIMDHEVTLEEIQ+FFVDYMI+DTLGAISTAHLVHADREPDKA +
Sbjct: 840 QTEPPMDYTGRRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDKACSEN 899
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CL LAT HSMAVDFAKTG AEMP LKPREFPDFM+R ++ MY S GVLGKLYR +NS
Sbjct: 900 CLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRATINS 959
Query: 362 IVCRNSDDLCTIQDA---YDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
V S + T + A YD DL V G+E+ I + HKEMY +RM+ L++YY E E E
Sbjct: 960 TVQTRSKFVWTKEMAELVYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEYEDE 1019
Query: 533 ILTGNLRQKSVYLQRDNRRYCILN*KIV 616
ILTGN+ K+ +L RDNRRY + +IV
Sbjct: 1020 ILTGNIYNKAQFLLRDNRRYGEMKERIV 1047
Score = 36.2 bits (82), Expect(2) = 3e-71
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCKE 681
Y E+K+RI++S K LQ+E K WF C +
Sbjct: 1039 YGEMKERIVLSVKDLQREAKEWFKSSCSK 1067
>ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago truncatula]
gi|355509999|gb|AES91141.1| Rna-dependent RNA polymerase
[Medicago truncatula]
Length = 1308
Score = 257 bits (657), Expect(2) = 1e-70
Identities = 130/200 (65%), Positives = 158/200 (79%), Gaps = 3/200 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
QT PMDYTGRRPRIMDH+VTLEEI +FFVDYMI+DTLGAISTAHLVHADRE DKA + K
Sbjct: 847 QTENPMDYTGRRPRIMDHKVTLEEIHQFFVDYMINDTLGAISTAHLVHADREHDKAKSRK 906
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CLELA HSMAVDFAKTG AEMP LKPREFPDFMER ++ MYIS+GVLGKLYR ++S
Sbjct: 907 CLELAELHSMAVDFAKTGAPAEMPRSLKPREFPDFMERFEKPMYISKGVLGKLYRATIDS 966
Query: 362 IVCRNSDDLCT---IQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
+ D + + ++AYD L V+G+E F+E +H++MY +M SL+++YGA E E
Sbjct: 967 NLQVRFDMVMSEKFAKEAYDHQLEVDGFEVFLETALSHRDMYAQKMISLMSFYGATTEDE 1026
Query: 533 ILTGNLRQKSVYLQRDNRRY 592
+LTGNL+ ++ YLQRDNRRY
Sbjct: 1027 MLTGNLQNRASYLQRDNRRY 1046
Score = 36.2 bits (82), Expect(2) = 1e-70
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCK 678
Y ++KDRIL+S K LQ E K WF C+
Sbjct: 1046 YGDMKDRILISVKDLQLEAKEWFESDCQ 1073
Score = 146 bits (368), Expect = 7e-33
Identities = 73/106 (68%), Positives = 85/106 (80%)
Frame = +2
Query: 44 IMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPKCLELATFHSMAVDF 223
I+ H + +I +FFVDYMI DTLGAISTAHLVHAD E +KA + KCLELA HSMAVDF
Sbjct: 1110 ILLHIKSANKIHKFFVDYMIKDTLGAISTAHLVHADCESNKAKSRKCLELAELHSMAVDF 1169
Query: 224 AKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
AKTG AEMP LKP+EFPDFMER ++ MY+S+GVLGKLYR +V S
Sbjct: 1170 AKTGALAEMPRVLKPKEFPDFMERFEKPMYVSKGVLGKLYRALVES 1215
>ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum]
gi|557097970|gb|ESQ38406.1| hypothetical protein
EUTSA_v10028370mg [Eutrema salsugineum]
Length = 1124
Score = 253 bits (647), Expect(2) = 2e-70
Identities = 126/194 (64%), Positives = 149/194 (76%), Gaps = 1/194 (0%)
Frame = +2
Query: 14 PMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPKCLEL 193
PMDY G RPRIMDH+VTLEEI +FFVDYMISDTLG ISTAHL+HADR+P+KA + KCLEL
Sbjct: 850 PMDYAGSRPRIMDHDVTLEEIHKFFVDYMISDTLGVISTAHLIHADRDPEKARSQKCLEL 909
Query: 194 ATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNSIVCR 373
A HS AVDFAKTG AEMP LKPREFPDF+ER ++ MYISE V GKLYR V S+ R
Sbjct: 910 ANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPMYISESVFGKLYRAVKRSLAQR 969
Query: 374 NSDDL-CTIQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVEILTGNL 550
++ + AYD L G+E+FIE K H++MY ++++SL+NYYGA E EILTG L
Sbjct: 970 KPEEAESEVTMAYDSTLEEAGFESFIETAKAHRDMYAEKLSSLMNYYGAANEEEILTGIL 1029
Query: 551 RQKSVYLQRDNRRY 592
R K +YLQRDNRRY
Sbjct: 1030 RTKEMYLQRDNRRY 1043
Score = 39.3 bits (90), Expect(2) = 2e-70
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCKE 681
Y ++KDRI +S K LQ+E GWF CKE
Sbjct: 1043 YGDMKDRITLSVKDLQREAMGWFDKSCKE 1071
>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 255 bits (651), Expect(2) = 6e-70
Identities = 135/208 (64%), Positives = 156/208 (75%), Gaps = 3/208 (1%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
QT PMDYTGRRPRIMDHEVTLEEIQ+FFVDYMI+DTLGAISTAHLVHADREP KA +
Sbjct: 840 QTEPPMDYTGRRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPYKARSEN 899
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CL LAT HSMAVDFAKTG AEMP LKPREFPDFM+R ++ MY S GVLGKLYR +NS
Sbjct: 900 CLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRATINS 959
Query: 362 IVCRNSDDLCT---IQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVE 532
V S + T + AYD DL V G+E+ I + HKEMY +RM+ L++YY E E E
Sbjct: 960 TVQIRSKFVWTKEMAELAYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEYEDE 1019
Query: 533 ILTGNLRQKSVYLQRDNRRYCILN*KIV 616
ILTGN+ K+ +L RDNRRY + +IV
Sbjct: 1020 ILTGNMYNKAQFLLRDNRRYGEMKERIV 1047
Score = 36.2 bits (82), Expect(2) = 6e-70
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCCKE 681
Y E+K+RI++S K LQ+E K WF C +
Sbjct: 1039 YGEMKERIVLSVKDLQREAKEWFKSSCSK 1067
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 252 bits (643), Expect(2) = 2e-69
Identities = 128/199 (64%), Positives = 155/199 (77%), Gaps = 3/199 (1%)
Frame = +2
Query: 5 TVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPKC 184
T PMDY G R RIMDH VTLEEIQRFFVDYMI+DTLGAISTAHLVHAD EPDKA + KC
Sbjct: 836 TEAPMDYVGGRQRIMDHNVTLEEIQRFFVDYMINDTLGAISTAHLVHADCEPDKARSEKC 895
Query: 185 LELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNSI 364
L+LAT HSMAVDFAKTG AEMP +LKPREFPDFMER ++ MYIS+GVLGKLYR + +S
Sbjct: 896 LQLATLHSMAVDFAKTGAPAEMPLYLKPREFPDFMERAEKQMYISDGVLGKLYRDIHDST 955
Query: 365 VCRNSDDLCT---IQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVEI 535
S+ + + + YD DL V+G+E F+ +KE Y+++M++L++YYGA+ E EI
Sbjct: 956 RQERSNFMWSKKIAEATYDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYGAKTEDEI 1015
Query: 536 LTGNLRQKSVYLQRDNRRY 592
LTGNLR + YLQRDNR+Y
Sbjct: 1016 LTGNLRHRPTYLQRDNRKY 1034
Score = 37.7 bits (86), Expect(2) = 2e-69
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWFTGCC 675
Y ++KDRILVS K+L+KE K WF C
Sbjct: 1034 YGDVKDRILVSLKNLKKEAKEWFESSC 1060
>gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlisea aurea]
Length = 1094
Score = 252 bits (644), Expect(2) = 2e-69
Identities = 125/197 (63%), Positives = 149/197 (75%)
Frame = +2
Query: 2 QTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPK 181
+TV PMDYTGRRPRIMDH+VT++EIQRFF DYM+SDTLGAIS AHLVHADREP+KAL+ K
Sbjct: 822 RTVDPMDYTGRRPRIMDHDVTIQEIQRFFADYMVSDTLGAISNAHLVHADREPEKALSSK 881
Query: 182 CLELATFHSMAVDFAKTGDAAEMPSFLKPREFPDFMER*DQTMYISEGVLGKLYRGVVNS 361
CLELA HS AVD+AK+G A MP L PRE+PDFMER + Y S G LGKLYR +
Sbjct: 882 CLELAALHSTAVDYAKSGAPAAMPRALLPREYPDFMERVGKPTYPSTGPLGKLYRAALRF 941
Query: 362 IVCRNSDDLCTIQDAYDLDLLVEGYEAFIENDKNHKEMYLDRMNSLLNYYGAEKEVEILT 541
I RNS + + +D DL+ +G+EAF+E +H+E Y +RM LL+YYGAE E EILT
Sbjct: 942 IGQRNSANEIPSRGFFDGDLVADGHEAFLETALSHRERYSERMGQLLSYYGAEDEAEILT 1001
Query: 542 GNLRQKSVYLQRDNRRY 592
GN+ KS YL RDNRRY
Sbjct: 1002 GNIESKSSYLSRDNRRY 1018
Score = 37.0 bits (84), Expect(2) = 2e-69
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1
Query: 595 YFELKDRILVSAKSLQKEVKGWF 663
Y E+KDRILVS KSL KE K WF
Sbjct: 1018 YGEVKDRILVSVKSLMKEAKVWF 1040