BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00015229
         (2611 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1539   0.0  
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1527   0.0  
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...  1523   0.0  
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...  1214   0.0  
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici...  1209   0.0  
gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus pe...  1200   0.0  
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1196   0.0  
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]      1187   0.0  
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1173   0.0  
gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobro...  1169   0.0  
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu...  1149   0.0  
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis...  1144   0.0  
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1138   0.0  
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]             1138   0.0  
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]             1137   0.0  
ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1129   0.0  
ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1129   0.0  
gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus...  1118   0.0  
ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1118   0.0  
ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago trunc...  1113   0.0  

>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
          Length = 1119

 Score = 1539 bits (3984), Expect = 0.0
 Identities = 771/873 (88%), Positives = 794/873 (90%), Gaps = 3/873 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            EFLWVRTTDFS IKSIGCSSSLCWE EDG          P  N DVIDL LDKVG+IYS 
Sbjct: 212  EFLWVRTTDFSNIKSIGCSSSLCWETEDGWLSSDLLSSLPCCNKDVIDLDLDKVGDIYSG 271

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            SEFVPLV  PSDLKLPYEILFQLNSLV TQKISLGAV+ DLIEVLSKLELDTAMMILQKM
Sbjct: 272  SEFVPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAVNPDLIEVLSKLELDTAMMILQKM 331

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            HKLQSTCFEP+TFIKTRLHVLGKN+KNQ SSSY+RLVNH+MMSVHRVLVTPSKIYCLGPE
Sbjct: 332  HKLQSTCFEPLTFIKTRLHVLGKNNKNQLSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPE 391

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LETSNYIVKNFA HASDFLRVTFVEEDW KL PNA+SMSVEQGIFAKPYRTKIYHRILSI
Sbjct: 392  LETSNYIVKNFAEHASDFLRVTFVEEDWGKLFPNAVSMSVEQGIFAKPYRTKIYHRILSI 451

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRS+SKCAAR
Sbjct: 452  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAAR 511

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFSTS QTMEVQ QHVEILPDIEVT+DGVSYCFSDGIGKISQAFARQVAQKCGLN+T
Sbjct: 512  MGQLFSTSVQTMEVQLQHVEILPDIEVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHT 571

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGGYKGVIAVDRNSFRKLSLR SMLKFES NRMLNITKWSDAMPCYLNREIVI
Sbjct: 572  PSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVI 631

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LLSTLGVEDKA            GKMLTTNEAALDVLES+GGG+VKKILMRMLLQGYAP+
Sbjct: 632  LLSTLGVEDKALEDLLDNHLRLLGKMLTTNEAALDVLESMGGGDVKKILMRMLLQGYAPN 691

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
             EPYLSMMLQSHFENQ+SDLRSRCR+FIPKGR+LVGCLDETGIL YG+VY RITMTKAEL
Sbjct: 692  REPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGEVYVRITMTKAEL 751

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            QNGQQNFFQ VDETTAVVRGKVVVTKNPCLHPGD              K WV+CIIFPQ 
Sbjct: 752  QNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQN 811

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            GERPHPNECSGGDLDGDLYFI WDE+LIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV
Sbjct: 812  GERPHPNECSGGDLDGDLYFICWDESLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 871

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMISDTLGAISTAHLVHADREPDKALN KCLQLATLHSMAVDFAKTGAAAEMPRFLKPR
Sbjct: 872  DYMISDTLGAISTAHLVHADREPDKALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 931

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332
            EFPDFMERWDKPMYISEGVLGKLYRGV+K +I RNSD L T   IQDAYD DLLVEGYE 
Sbjct: 932  EFPDFMERWDKPMYISEGVLGKLYRGVIKSYIRRNSDDLSTDRAIQDAYDHDLLVEGYEA 991

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
            FIE AK HKEMYLD M+SLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS
Sbjct: 992  FIETAKTHKEMYLDSMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 1051

Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
            AKSL KEVK WF+GCC EDDHQKL SAWYHVTY
Sbjct: 1052 AKSLHKEVKGWFSGCCTEDDHQKLVSAWYHVTY 1084


>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum]
          Length = 1119

 Score = 1527 bits (3954), Expect = 0.0
 Identities = 765/873 (87%), Positives = 792/873 (90%), Gaps = 3/873 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            EFLW+RTTDFS IKSIGCSSSLCWE EDG          P  N DVIDL LDKVG+IYS 
Sbjct: 212  EFLWIRTTDFSNIKSIGCSSSLCWETEDGWLSSDLFSSLPCCNQDVIDLDLDKVGDIYSG 271

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            SEFVPLV  PSDLKLPYEILFQLNSLV TQKISLGA++ +LIEVLSKLELDTAMMILQKM
Sbjct: 272  SEFVPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAINPNLIEVLSKLELDTAMMILQKM 331

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            HKLQS CF+P+ FIKTRLHVLGKN+KN+PSSSY+RLVNH+MMSVHRVLVTPSKIYCLGPE
Sbjct: 332  HKLQSICFDPLLFIKTRLHVLGKNNKNRPSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPE 391

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LETSNYIVKNFASHASDFLRVTFVEEDW KL PNA+SMSVEQGIFAKPYRTKIYHRILSI
Sbjct: 392  LETSNYIVKNFASHASDFLRVTFVEEDWGKLFPNAVSMSVEQGIFAKPYRTKIYHRILSI 451

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRS+SKCAAR
Sbjct: 452  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAAR 511

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFSTS QTMEV+ QHVEILPDIEVT+DGVSYCFSDGIGKISQAFARQVAQKCGLN+T
Sbjct: 512  MGQLFSTSVQTMEVKLQHVEILPDIEVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHT 571

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGGYKGVIAVDRNSFRKLSLR SMLKFES NRMLNITKWSDAMPCYLNREIVI
Sbjct: 572  PSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVI 631

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LLSTLGVEDKA            GKMLTTNEAALDVLES+GGGEVKKILMRMLLQGYAP+
Sbjct: 632  LLSTLGVEDKAFEDLLDNHLCLLGKMLTTNEAALDVLESMGGGEVKKILMRMLLQGYAPN 691

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
             EPYLSMMLQSHFENQ+SDLRSRCR+FIPKGR+LVGCLDETGIL YGQVY RITMTKAEL
Sbjct: 692  QEPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGQVYVRITMTKAEL 751

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            QNGQQNFFQ VDETTAVVRGKVVVTKNPCLHPGD              K WV+CIIFPQK
Sbjct: 752  QNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQK 811

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            GERPHPNECSGGDLDGDLYFI WDE+LIP QTVTPMDYTGRRPRIMDHEVTLEEIQRFFV
Sbjct: 812  GERPHPNECSGGDLDGDLYFICWDESLIPCQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 871

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMISDTLGAISTAHLVHADREPDKALN KCLQLATLHSMAVDFAKTGAAAEMPRFLKPR
Sbjct: 872  DYMISDTLGAISTAHLVHADREPDKALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 931

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLC---TIQDAYDLDLLVEGYED 2332
            EFPDFMERWDKPMYISEGVLGKLYRGV+K +I RNSD L     IQDAYD DLLVEGYE 
Sbjct: 932  EFPDFMERWDKPMYISEGVLGKLYRGVMKSYIRRNSDDLSADRAIQDAYDHDLLVEGYEA 991

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
            F E AK HK MYLD M+SLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS
Sbjct: 992  FTETAKTHKAMYLDSMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 1051

Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
            AKSL KEVK WFT CC+EDDHQKLASAWYHVTY
Sbjct: 1052 AKSLHKEVKGWFTSCCQEDDHQKLASAWYHVTY 1084


>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score = 1523 bits (3944), Expect = 0.0
 Identities = 764/873 (87%), Positives = 792/873 (90%), Gaps = 3/873 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            EFLWVRTTDFS +KSIGCSSS CWEIEDG          PY NNDV+DL LD+VG+IYSA
Sbjct: 213  EFLWVRTTDFSAMKSIGCSSSPCWEIEDGLLSSDLLSGLPYCNNDVMDLVLDEVGDIYSA 272

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            SE VPL S PSDLKLPYEILFQLNSL+HT KISLGAV TDLIEVLSKLELDTAMMILQKM
Sbjct: 273  SELVPLASFPSDLKLPYEILFQLNSLIHTHKISLGAVKTDLIEVLSKLELDTAMMILQKM 332

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            HKLQSTCFEPV FIKTRLHVLGKNSKNQPSSSY+RLVN NMMSVHRVLVTPSK+YCLGPE
Sbjct: 333  HKLQSTCFEPVPFIKTRLHVLGKNSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGPE 392

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LETSNYIVKNFA HASDFLRVTFVEEDW KLSPNAISMSVEQGIFAKPYRTKIYHRILSI
Sbjct: 393  LETSNYIVKNFALHASDFLRVTFVEEDWGKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 452

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LR+G+VIG+KRF FLAFSASQLRSNSVWMFASNE+VKAEDIREWMGCFNKIRSVSKCAAR
Sbjct: 453  LRDGLVIGSKRFLFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAAR 512

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFSTSFQTMEVQ  HVEILPDIEVT+DGVSYCFSDGIGKISQAFA QVAQKCGL+YT
Sbjct: 513  MGQLFSTSFQTMEVQSPHVEILPDIEVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYT 572

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGGYKGVIAVDRNSFRKLSLR SMLKFES NRMLNITKWSDAMPCYLNREIVI
Sbjct: 573  PSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVI 632

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LLSTLGVEDK             GKMLTTNEAALDVLESIGGG+VKKILMRML QGYAP+
Sbjct: 633  LLSTLGVEDKVFEDLLDNHLHLLGKMLTTNEAALDVLESIGGGDVKKILMRMLHQGYAPN 692

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
            LEPYLSMMLQSHFENQLSDLRSRCR+FI KGRVLVGCLDETGILNYGQVYARITMTKAEL
Sbjct: 693  LEPYLSMMLQSHFENQLSDLRSRCRIFIHKGRVLVGCLDETGILNYGQVYARITMTKAEL 752

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            Q+ QQ+FFQ VDETTAVVRG VVVTKNPCLHPGD              KAWV+CIIFPQK
Sbjct: 753  QSAQQSFFQKVDETTAVVRGNVVVTKNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQK 812

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            GERPHPNECSGGDLDGDLYFISWDENLIP QTVTPMDYTGRR RIMDHEVTL+EIQRFFV
Sbjct: 813  GERPHPNECSGGDLDGDLYFISWDENLIPRQTVTPMDYTGRRTRIMDHEVTLQEIQRFFV 872

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR
Sbjct: 873  DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 932

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332
            EFPDF+ERWDKPMYISEGVLGKLYR +V   +  NSD L +   IQDAYD  LL +GYE 
Sbjct: 933  EFPDFLERWDKPMYISEGVLGKLYRAIVNSSVRSNSDDLGSVRAIQDAYDHALLFDGYEA 992

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
            FIE AKNHKE YLDRM+SLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS
Sbjct: 993  FIETAKNHKETYLDRMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 1052

Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
            AKSLQKEVK WFTGCCKED+H+KLASAWYHVTY
Sbjct: 1053 AKSLQKEVKGWFTGCCKEDEHKKLASAWYHVTY 1085


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score = 1214 bits (3140), Expect = 0.0
 Identities = 604/873 (69%), Positives = 706/873 (80%), Gaps = 3/873 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            EFLW+RTTDFS IKS+G S+S CWEI++G          PY   D+ +L L++     S 
Sbjct: 211  EFLWLRTTDFSSIKSLGQSTSFCWEIKEGFPALDIFASFPYYK-DLTELTLEQGEGFCSD 269

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            S  VPLV   S  KL YEILFQLNSLVH QKISL AVDTDLIE+LS L +DTA+MILQK+
Sbjct: 270  SGLVPLVKCESGPKLAYEILFQLNSLVHAQKISLAAVDTDLIEILSNLPVDTAIMILQKL 329

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            HK +ST ++P++FIK + H++  N KN P SS++RL N+N+MS HRVLVTPSKIYCLGPE
Sbjct: 330  HKRKSTRYDPISFIKAQAHIINMNIKNLPPSSHSRLTNNNVMSCHRVLVTPSKIYCLGPE 389

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LE+SNY+VK++A++ASDF+RV+FVEEDWSKL  NA+SMS+ +  FA P+RT+IYHRILSI
Sbjct: 390  LESSNYVVKHYAAYASDFVRVSFVEEDWSKLPSNALSMSIRKAFFADPFRTEIYHRILSI 449

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LREGIVIG KRF FLAFSASQLRSNSVWMFASN+ V+ +DIREWMGCF KIRSVSKCAAR
Sbjct: 450  LREGIVIGAKRFQFLAFSASQLRSNSVWMFASNDKVRVDDIREWMGCFKKIRSVSKCAAR 509

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S QT+ V  Q VE++PDIEVT+DG  YCFSDGIGKIS +FA+QVAQKCGL+ T
Sbjct: 510  MGQLFSSSVQTLPVPVQDVEVIPDIEVTSDGFGYCFSDGIGKISLSFAKQVAQKCGLHQT 569

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGGYKGVIAVDRNSFRKLSLR SMLKFES NRMLN+TKWS++ PCYLNREIV 
Sbjct: 570  PSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFESQNRMLNVTKWSESTPCYLNREIVS 629

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LLSTLGVED+              KMLT  +AALDVLES+GG + K IL +MLLQGY P+
Sbjct: 630  LLSTLGVEDENFEALLNEQMHLLDKMLTNRQAALDVLESMGGIDNKNILAKMLLQGYEPN 689

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
            +EPYLSMMLQ++ E+QLSD+R+RCR+F+PK RVL+GCLDETGILNYGQVY R+TMTKAE 
Sbjct: 690  VEPYLSMMLQAYRESQLSDIRTRCRIFVPKARVLIGCLDETGILNYGQVYVRVTMTKAEH 749

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            +   Q+FFQ VD+TT+VV GKV+VTKNPCLHPGD              K  V+CI+FPQK
Sbjct: 750  KCRNQSFFQKVDDTTSVVIGKVIVTKNPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQK 809

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            GERPHPNECSGGDLDGD +FI WDE LIP QT  PMDYT RRPRIMDH+VTLEEIQ+FFV
Sbjct: 810  GERPHPNECSGGDLDGDQFFICWDEGLIPSQTEAPMDYTSRRPRIMDHDVTLEEIQKFFV 869

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMI+DTLG ISTAHLVHADREP+KA + KCL+LATLHSMAVDFAKTGA AEMPR LKP+
Sbjct: 870  DYMINDTLGVISTAHLVHADREPEKARSKKCLELATLHSMAVDFAKTGAPAEMPRVLKPK 929

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLC--TIQD-AYDLDLLVEGYED 2332
            EFPDFMER DKPMYIS G LGKLYR  +   ++  S  +   TI   AYD DL V+G+E 
Sbjct: 930  EFPDFMERVDKPMYISNGALGKLYRATIASRVNEKSSFVWSGTIPGAAYDHDLEVDGFET 989

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
            F+E AK HKEMY ++M++L+N+YGAE E E+LTGNLR K +YLQRDNRR+ E+KDRIL+S
Sbjct: 990  FLEIAKLHKEMYAEKMATLMNFYGAESEDEMLTGNLRNKLMYLQRDNRRFTEMKDRILIS 1049

Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
             KSLQKE K W  G CK   HQK+ASAWYHVTY
Sbjct: 1050 VKSLQKEAKEWLYGSCKPHQHQKMASAWYHVTY 1082


>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 983

 Score = 1209 bits (3127), Expect = 0.0
 Identities = 598/873 (68%), Positives = 702/873 (80%), Gaps = 3/873 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            +F+WVRTTDFS +KS+G S+S CWEIE+G          PY      ++ L+      SA
Sbjct: 60   DFIWVRTTDFSSVKSVGQSTSFCWEIEEGLEASDIFKSFPYYTEAREEVILEDGEEWGSA 119

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            SE VPLV   SD KLPYEILFQLNSLVHTQKISL AVDT+LI  L  L +DTA MILQK+
Sbjct: 120  SEIVPLVKCGSDSKLPYEILFQLNSLVHTQKISLAAVDTNLITTLGSLTIDTATMILQKL 179

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            HKL  TC++P+ FIK +LHV G+N K    SS   LVNHN+MS HR L+TPSKIYCLGPE
Sbjct: 180  HKLAVTCYDPLAFIKKQLHVPGRNLKRPFFSSSKNLVNHNIMSCHRALITPSKIYCLGPE 239

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LE+SNY+VKNFAS+ASDF+RVTFVEEDWSKL  NAISMS+++GIFAKP+RT IYHRILSI
Sbjct: 240  LESSNYVVKNFASYASDFMRVTFVEEDWSKLPANAISMSIQRGIFAKPFRTGIYHRILSI 299

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LR+GIVIG K+F FLAFSASQLRSNSVWMFASN+  KAE+IREWMGCFNKI S+SKCAAR
Sbjct: 300  LRDGIVIGAKKFEFLAFSASQLRSNSVWMFASNDKKKAEEIREWMGCFNKIHSISKCAAR 359

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S QT  V PQ +EI+PDIEVT+DG++YCFSDGIGKIS +FARQVAQKCGLN T
Sbjct: 360  MGQLFSSSKQTFIVSPQDMEIIPDIEVTSDGINYCFSDGIGKISLSFARQVAQKCGLNRT 419

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGGYKGVIAVDRNSFRKLSLR SM KFES NRMLN+TKWS++MPCYLNREI+ 
Sbjct: 420  PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMCKFESENRMLNVTKWSESMPCYLNREIIT 479

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LL+TLGV+D+              +MLT  E+AL+VLE++     K IL++ML+QGY P+
Sbjct: 480  LLTTLGVKDEIFEGLQQQQLQLLNRMLTNRESALNVLENLAWANCKNILIKMLVQGYEPN 539

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
            +EPYLSMMLQ++ EN L +LRSRCR+F+PKGR+L+GCLDET IL+YGQVY RITMTKAEL
Sbjct: 540  VEPYLSMMLQAYHENLLVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAEL 599

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            Q+  Q  F  VDETTAVV GKV+VTKNPCLHPGD              K  V+CI+FPQK
Sbjct: 600  QDADQASFHRVDETTAVVTGKVIVTKNPCLHPGDIRVLEAVYEVELEEKGLVDCILFPQK 659

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            GERPHPNECSGGDLDGD +FISWD+ LIP +T +PMDY GRRPR MDH+VTLEEIQ+FF+
Sbjct: 660  GERPHPNECSGGDLDGDQFFISWDKGLIPGETESPMDYQGRRPRKMDHDVTLEEIQKFFI 719

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMI+DTLGAISTAHLVHADREPDKA + KCLQLA LHSMAVDFAKTGA AEMP+ LKP+
Sbjct: 720  DYMINDTLGAISTAHLVHADREPDKARSSKCLQLAELHSMAVDFAKTGAPAEMPKALKPK 779

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332
            EFPDFMER DK MYIS GVLGKLYRG +     + S  + T    +  YD DL V+G+E+
Sbjct: 780  EFPDFMERIDKKMYISGGVLGKLYRGTLDSTRQQRSKFVWTENIAEATYDHDLEVKGFEE 839

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
            F+E A +HK+MY++++S L++YY A+KE EILTGNL+ K++YLQRDNRRY + KDRIL+S
Sbjct: 840  FVEIAISHKDMYVEKLSGLMDYYEAKKEDEILTGNLQNKAMYLQRDNRRYGDTKDRILIS 899

Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
             KSLQKE K WF  CC+  + Q+LASAWYHVTY
Sbjct: 900  VKSLQKEAKEWFESCCQAKEKQRLASAWYHVTY 932


>gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
          Length = 1118

 Score = 1200 bits (3104), Expect = 0.0
 Identities = 596/874 (68%), Positives = 703/874 (80%), Gaps = 4/874 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPY-ANNDVIDLYLDKVGNIYS 178
            +FLWVRTTDFS +KSIG S+S CWEIE+           PY  +NDV+DL LD      S
Sbjct: 211  DFLWVRTTDFSDMKSIGYSTSFCWEIEEEFSVSDVFECFPYYKDNDVVDLILDNGEKYCS 270

Query: 179  ASEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQK 358
             SE VPLV   SD KLPYEILFQLN+LVH+QKISL A D+DLIE LS L +DT  ++L+K
Sbjct: 271  PSETVPLVKCRSDSKLPYEILFQLNALVHSQKISLAATDSDLIEFLSGLSVDTTNVLLEK 330

Query: 359  MHKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGP 538
            +HK ++TC++P++F+K +LHVL +N K++PS  Y RL+ HN+MS HRVL+TPSKI CLGP
Sbjct: 331  LHKRKTTCYDPLSFLKMQLHVLERNHKSRPSP-YKRLMEHNVMSCHRVLITPSKICCLGP 389

Query: 539  ELETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILS 718
            ELE SNY+VKNFA++ASDF+RVTFV+EDWSKL  NAIS S++QGIFAKP+RT IYHR+LS
Sbjct: 390  ELEKSNYVVKNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHRMLS 449

Query: 719  ILREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAA 898
            ILR+GIVIG KRF FLAFSASQLRS+SVWMF+SN+ VKAEDIREWMGCF+KIRS+SKCAA
Sbjct: 450  ILRDGIVIGEKRFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAA 509

Query: 899  RMGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNY 1078
            RMGQLFS+S QT+ V  Q VEI+PD+E ++DGV+YCFSDGIGKIS +FAR+VAQKCGL+ 
Sbjct: 510  RMGQLFSSSTQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQ 569

Query: 1079 TPSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIV 1258
            TPSAFQIRYGGYKGVIAVD  SFRKLSLR SMLKFES NRMLN+TKWSDAMPCYLNREI+
Sbjct: 570  TPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSMLKFESKNRMLNVTKWSDAMPCYLNREII 629

Query: 1259 ILLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAP 1438
             LLSTLGV+D+             GKM T   AAL+V E + G + K  L++MLL GY P
Sbjct: 630  SLLSTLGVKDETFEALQEEQLRLLGKMRTERGAALNVFERLNGADSKNTLVKMLLHGYEP 689

Query: 1439 SLEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAE 1618
            + EPYLSMMLQ+++EN LSDL+SRCR+F+PKGRVLVGCLDETG L+YGQVY RITMTKAE
Sbjct: 690  NAEPYLSMMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAE 749

Query: 1619 LQNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQ 1798
             + G Q+FFQ VDETT VV GKVVVTKNPCLHPGD              K  V+C+IFPQ
Sbjct: 750  QEMGDQSFFQKVDETTLVVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEEKNMVDCLIFPQ 809

Query: 1799 KGERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFF 1978
            KGERPHPNECSGGDLDGDL+FISWD++L+P  TV PMDY+ RRPRIMDH VTLEEIQ+FF
Sbjct: 810  KGERPHPNECSGGDLDGDLFFISWDKDLVPSHTVPPMDYSARRPRIMDHTVTLEEIQKFF 869

Query: 1979 VDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKP 2158
            VDYMI+D LGAISTAHLVHAD EPDKALNPKCLQLA LHSMAVDFAKTGA AEM R LKP
Sbjct: 870  VDYMINDNLGAISTAHLVHADHEPDKALNPKCLQLADLHSMAVDFAKTGAPAEMSRTLKP 929

Query: 2159 REFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCTIQ---DAYDLDLLVEGYE 2329
            +EFPDFMER DKPMYIS G LGKLYR VV   +   ++++ + Q    AYD DL V+G E
Sbjct: 930  KEFPDFMERVDKPMYISNGALGKLYRAVVGSVLQEKTNLVWSEQIAEAAYDQDLEVDGLE 989

Query: 2330 DFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILV 2509
              +E AK H++MY+++M +++NYYGA  E EILTGNLR ++ YLQRDNRRY ++KDRI +
Sbjct: 990  SVLEVAKGHRDMYIEKMRTMMNYYGAVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISL 1049

Query: 2510 SAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
            S K+LQKE K  F   C   +HQ++ASAWYHVTY
Sbjct: 1050 SLKNLQKEAKGLFESSCPVSEHQRMASAWYHVTY 1083


>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
          Length = 1131

 Score = 1196 bits (3095), Expect = 0.0
 Identities = 581/873 (66%), Positives = 705/873 (80%), Gaps = 3/873 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            +F WVRTTDFS  KSIGCS+S  WEI++G          P+   D  DL L++     + 
Sbjct: 226  DFFWVRTTDFSVTKSIGCSTSFFWEIKNGLLASDISNIFPFYKEDKTDLILEEGEEFCTT 285

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            SE VPLV       L +E+LFQLNSLVH QK+SL A D +LI++L+ L ++TA+M+LQK+
Sbjct: 286  SEIVPLVKCRPGFNLSHEVLFQLNSLVHNQKVSLVAADAELIQILNGLSMETALMVLQKL 345

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            HKL+S C++PV+F+KT+LHVLG+N K+ P SS+ RL++HN+MS +R LVTP KIYCLGPE
Sbjct: 346  HKLKSICYDPVSFVKTQLHVLGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGPE 405

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LETSNY+VKNFA +ASDF+RVTFVEEDWSKL  NA+S S+++GIFAKPYRTKIY RIL+I
Sbjct: 406  LETSNYVVKNFAKYASDFMRVTFVEEDWSKLPANALSTSIQRGIFAKPYRTKIYSRILTI 465

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            L++GIVIG K + FLAFSASQLR+NSVWMFASN+ V AED+REWMGCFNKI SVSKCAAR
Sbjct: 466  LQDGIVIGDKHYEFLAFSASQLRNNSVWMFASNDEVSAEDVREWMGCFNKIHSVSKCAAR 525

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S QT+ V  Q VE++PD+EVT+DG +YCFSDGIGKIS +FARQVAQKCGL++T
Sbjct: 526  MGQLFSSSKQTLVVPVQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHT 585

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFES NRMLN+TKWS++MPC+LNREI+ 
Sbjct: 586  PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIIS 645

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LLSTLGV+D              GKML   EAALDVL+ + G + K IL++MLLQGY P+
Sbjct: 646  LLSTLGVKDDVFEAMQQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEPN 705

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
            +EPYLSMML SH ENQLSDL+SRCR+++PKGR+L+GC DETGILNYGQV+ R+TMT+ EL
Sbjct: 706  VEPYLSMMLLSHHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREEL 765

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            ++  Q+FF  VD+ T++V+GKV+VTKNPCLHPGD              K +V+CIIFPQK
Sbjct: 766  ESKDQSFFHRVDDKTSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQK 825

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            GERPHPNECSGGDLDGD++FISWD +LIP +T  PMDYTGRR RIMDH+VTLEEI +FFV
Sbjct: 826  GERPHPNECSGGDLDGDIFFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFV 885

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMI+DTLGAISTAHLVHADR+PDKA + KCL LATLHSMAVDFAKTGA AEMP  LKP+
Sbjct: 886  DYMINDTLGAISTAHLVHADRDPDKARSSKCLHLATLHSMAVDFAKTGAPAEMPLALKPK 945

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332
            EFPDFMER DKP YIS GVLGKLYR  +   +   S+ + +    + +YD DL V+G+E 
Sbjct: 946  EFPDFMEREDKPRYISFGVLGKLYRATLDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEA 1005

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
            F+  A++HKEMY + M++L+NYYGA  E EILTGNLR ++ YLQRDNRRY ++KDRIL+S
Sbjct: 1006 FLGVAESHKEMYEEEMNALMNYYGASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLS 1065

Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
            AK+LQ E K WF   CKE++H +LASAWYHVTY
Sbjct: 1066 AKNLQNEAKEWFGSSCKENEHPQLASAWYHVTY 1098


>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
          Length = 1115

 Score = 1187 bits (3072), Expect = 0.0
 Identities = 576/873 (65%), Positives = 697/873 (79%), Gaps = 3/873 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            EF WVRTTDF   KSIG S+SLCW+ ++           PY    + DL L+      S 
Sbjct: 209  EFHWVRTTDFLESKSIGHSTSLCWDAKEDFLSSDTFRSFPYYREGMKDLILEDSDEFCSV 268

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            SE VPL+  P+   L YEILFQLNSLVH QKIS  + D DLIE    L +DTA  ++QK+
Sbjct: 269  SETVPLIKCPAGSNLSYEILFQLNSLVHMQKISFASADADLIEYFGSLNIDTANAVIQKL 328

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            HKL+STC++P++  KT  H+L KN+KN PSS+  RL  +++MS HR L+TPSKIYC+GPE
Sbjct: 329  HKLKSTCYDPLSLAKTYAHILEKNTKN-PSSAIKRLTENSLMSCHRALITPSKIYCMGPE 387

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LETSNY+VKNFA++ASDFLRVTFVEEDW KL P+ +S S+EQGIFAKPYRT IY RILSI
Sbjct: 388  LETSNYVVKNFAAYASDFLRVTFVEEDWGKLHPHVVSTSIEQGIFAKPYRTGIYDRILSI 447

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LR GI+IG KR+ FLAFSASQLRS++VWMFASN+ VKAEDIREWMGCFNKIRSVSKCAAR
Sbjct: 448  LRNGILIGAKRYEFLAFSASQLRSSAVWMFASNDNVKAEDIREWMGCFNKIRSVSKCAAR 507

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S QT+ V  Q +EI+PD+EVT DG+ YCFSDGIGKIS +FARQVAQKCGL  T
Sbjct: 508  MGQLFSSSRQTLIVPTQDLEIIPDVEVTTDGIDYCFSDGIGKISSSFARQVAQKCGLKET 567

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGGYKGVIAV+R+SFRKLSLR SMLKFES+NRMLN+TKWS +MPCYLNREIV 
Sbjct: 568  PSAFQIRYGGYKGVIAVNRSSFRKLSLRSSMLKFESSNRMLNVTKWSGSMPCYLNREIVS 627

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LLS+LGV+D++            GKM T  EAAL+VLE++ G +   IL++MLLQGY P+
Sbjct: 628  LLSSLGVKDESFLALLREQLLLLGKMRTNREAALNVLENLNGSDSSNILVKMLLQGYEPN 687

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
             EPYLSMM+QS++ENQLSDL++RCR+F+PKG+VL+GCLDETGIL YGQVY R+TM KAEL
Sbjct: 688  AEPYLSMMIQSYYENQLSDLKTRCRIFVPKGKVLIGCLDETGILEYGQVYVRLTMKKAEL 747

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            + G Q+FF+ VD+ T++V GKVVVTKNPCLHPGD              +  V+C++FPQK
Sbjct: 748  EAGNQSFFRKVDDETSIVVGKVVVTKNPCLHPGDVRVLEAVYDAKLEEEGLVDCLVFPQK 807

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            GERPHPNECSGGDLDGDL+FISWD NLIP +T  PMDY GRRPRIMDH+VTLEEIQ+FFV
Sbjct: 808  GERPHPNECSGGDLDGDLFFISWDTNLIPPRTTAPMDYIGRRPRIMDHDVTLEEIQKFFV 867

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMI+DTLG ISTAHL+HADREP+KA +  CLQLATLHSMAVDFAKTGA AEMPR L+PR
Sbjct: 868  DYMINDTLGGISTAHLIHADREPEKAFSENCLQLATLHSMAVDFAKTGAPAEMPRALRPR 927

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLC---TIQDAYDLDLLVEGYED 2332
            ++PDFMER D+PMY+S G LGKLYR  V+     +S+++    T + AYD DL V G+E+
Sbjct: 928  DYPDFMERLDRPMYVSNGALGKLYRATVESESQGSSNLVWSEKTAEAAYDRDLEVNGFEE 987

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
            FI  A++H++MY+D+M+ ++NYY  E E E+LTGNLR+++ YLQRDNRRYFE+KDRIL++
Sbjct: 988  FIALAESHRDMYIDKMNGIMNYYELESEDEVLTGNLRKRAAYLQRDNRRYFEVKDRILLA 1047

Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
             KSLQ+E K WF G C+  + QK+ASAWYHVTY
Sbjct: 1048 VKSLQREAKGWFEGSCEAMEQQKMASAWYHVTY 1080


>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca subsp.
            vesca]
          Length = 1136

 Score = 1173 bits (3035), Expect = 0.0
 Identities = 574/873 (65%), Positives = 691/873 (79%), Gaps = 3/873 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            ++LWVR TDFS +KSIG S++ CWEI++           P    DV+DL  +  G+    
Sbjct: 214  DYLWVRCTDFSEMKSIGHSTAFCWEIQEDVAAAGVFTTFPSFRKDVVDLMFEDGGDCLLV 273

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            SE VPLV   +D+K PYEILFQLN LVH QKISL AV +DLIE    L +DTA ++L+K+
Sbjct: 274  SETVPLVKCEADMKFPYEILFQLNVLVHAQKISLAAVGSDLIEFFGGLSMDTANVLLEKL 333

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
             KL++TC++P++F+K +L +L +NSK +  S + RL+ HN+MS HRVL+TPSKIYCLGPE
Sbjct: 334  QKLKTTCYDPLSFVKVQLQLLERNSKKR-LSPHQRLMEHNVMSCHRVLITPSKIYCLGPE 392

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LE SNY+VKNFA +ASDF+RVTFVEEDW KL  NA+S S+EQG FAKP+RT IY RILSI
Sbjct: 393  LEKSNYVVKNFAQYASDFMRVTFVEEDWGKLPVNALSTSIEQGFFAKPFRTGIYQRILSI 452

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LR+GIVIG KRF FLAFSASQLRSNSVWMFASN+ VKAEDIR+WMGCFNKIRSVSKCAAR
Sbjct: 453  LRDGIVIGDKRFEFLAFSASQLRSNSVWMFASNDSVKAEDIRDWMGCFNKIRSVSKCAAR 512

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S QT+ V  + VE++PDIE T DGVSYCFSDGIGKIS +FARQVAQKCGLN T
Sbjct: 513  MGQLFSSSTQTLTVPQKDVELIPDIETTTDGVSYCFSDGIGKISLSFARQVAQKCGLNDT 572

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGGYKGVIAVDRNSFRKLSLR SMLKF+S NRMLN+TKWS +MPC+LNREI+ 
Sbjct: 573  PSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFDSDNRMLNVTKWSSSMPCFLNREIIT 632

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            L+STLGVED+A            G+M      AL  LE + G +   IL+++LLQGY P+
Sbjct: 633  LMSTLGVEDEAFEALQQEQLDLLGRMRKDRNVALSSLEKLSGADSNNILVKLLLQGYEPN 692

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
            LEPYLSMMLQ+H+E+ L+DL+SRCR+++PKGR+LVGCLDETG LNYGQVY RITMTKAE 
Sbjct: 693  LEPYLSMMLQAHYEHHLADLKSRCRMYVPKGRILVGCLDETGTLNYGQVYLRITMTKAEQ 752

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            + G Q+FFQ VDE T +V GKVVVTKNPCLHPGD              K  V+CI+FPQK
Sbjct: 753  EMGHQSFFQRVDEATCIVTGKVVVTKNPCLHPGDIRVLEAVYDVGLEEKNMVDCILFPQK 812

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            GERPHPNECSGGDLDGDL+FISWD++LIP  TV PMDY+ RRPR MDH+VTLEEIQ+FFV
Sbjct: 813  GERPHPNECSGGDLDGDLFFISWDKSLIPPTTVPPMDYSARRPRNMDHDVTLEEIQKFFV 872

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMI+D LGAISTAHLVH+D EP+KA++ KCL+LA LHSMAVDFAKTGA AE+   LKP+
Sbjct: 873  DYMINDNLGAISTAHLVHSDHEPEKAMSKKCLELADLHSMAVDFAKTGAPAELSWILKPK 932

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCTIQ---DAYDLDLLVEGYED 2332
            EFPDFMER ++PMYIS G LGKLYR +    +   + V+ + Q   +AYD +L V+G+E 
Sbjct: 933  EFPDFMERVERPMYISNGALGKLYRAIRSSVVQEQTIVVWSQQRAEEAYDRELEVQGFES 992

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
            F+E A++H++ Y+++M SL+NYY A  E EILTGNLR ++ YLQRDNRRYF+LKDRIL+S
Sbjct: 993  FLEMAESHRDKYIEKMRSLMNYYEATTEDEILTGNLRNRAAYLQRDNRRYFDLKDRILLS 1052

Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
             K+LQKE K WF   CK  + Q+LASAWYHVTY
Sbjct: 1053 LKTLQKEAKGWFESSCKVSEQQRLASAWYHVTY 1085


>gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
            gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
            2 isoform 1 [Theobroma cacao]
          Length = 1149

 Score = 1169 bits (3024), Expect = 0.0
 Identities = 581/873 (66%), Positives = 690/873 (79%), Gaps = 3/873 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            +FLWVRTTDFS  K++G S++  WEI                  D+  L L   G   SA
Sbjct: 218  DFLWVRTTDFSRTKAVGQSTAFYWEINAELLTLDLFSCFSCYREDMKGLTLKGGGEFSSA 277

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
             E VPLV  PSD KL YEILFQLNSLVHTQKIS+ +VDTDLI++L  L ++TA+MILQK 
Sbjct: 278  PEIVPLVKGPSDSKLAYEILFQLNSLVHTQKISIASVDTDLIDILRVLAVETAVMILQKF 337

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            HKL STC+ PV+F+K  L V  +N +++P SS+ RL++HN+MS HR LVTPSKIYCLGPE
Sbjct: 338  HKLLSTCYNPVSFVKENLPVSERNFQSRPLSSFKRLIDHNVMSCHRALVTPSKIYCLGPE 397

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LETSNY+VKNFA +ASDF+RV+FVEEDW KLS NAIS SV+ GIF+KP+RTKIYHRILS+
Sbjct: 398  LETSNYVVKNFAEYASDFMRVSFVEEDWGKLSANAISTSVQLGIFSKPFRTKIYHRILSV 457

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            L+ GIVIG KRF FLAFSASQLRSNSVWMFASN+ V AED+REWMGCF KIRSVSKCAAR
Sbjct: 458  LQHGIVIGDKRFEFLAFSASQLRSNSVWMFASNDKVTAEDVREWMGCFKKIRSVSKCAAR 517

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S  T+ V  Q V+I+PDIEVT+DG++YCFSDGIGKIS  FAR+VAQKCGLN T
Sbjct: 518  MGQLFSSSLPTLVVPVQDVKIIPDIEVTSDGINYCFSDGIGKISLPFAREVAQKCGLNDT 577

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGGYKGV+AVDRNSFRK+SLR SM KFES  RMLN+TKWS++MPC+LNREIV 
Sbjct: 578  PSAFQIRYGGYKGVVAVDRNSFRKMSLRGSMHKFESKIRMLNVTKWSESMPCFLNREIVT 637

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LLSTLG++D+A            G+MLT  EAALDVL+S+ G + + IL++MLLQGY P+
Sbjct: 638  LLSTLGIKDEAFETLQQEQLHLLGQMLTNREAALDVLQSLCGADSQNILVKMLLQGYEPN 697

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
            +EPYLSMML ++  + LSDL+ RCR+++PKG+VLVGCLDET  LNYGQVY R+++ KAEL
Sbjct: 698  VEPYLSMMLLANHVSLLSDLKCRCRIYVPKGQVLVGCLDETATLNYGQVYVRLSIKKAEL 757

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            ++  QNFF  VDE TA+V GKVVVTKNPCLHPGD              K  V+C++FPQK
Sbjct: 758  EHADQNFFHKVDEKTAIVIGKVVVTKNPCLHPGDVRVLEAVYEAELEDKGLVDCLVFPQK 817

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            GERPHPNECSGGDLDGD +FISWD++LIP QT  PMDYTG RPRIMDHEVTLEEIQ+FFV
Sbjct: 818  GERPHPNECSGGDLDGDQFFISWDKDLIPCQTDAPMDYTGSRPRIMDHEVTLEEIQKFFV 877

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMI+DTLGAISTAHLVHADREPDKA + KCL+LATLHSMAVDFAKTGA AEMPR LKPR
Sbjct: 878  DYMINDTLGAISTAHLVHADREPDKARSEKCLELATLHSMAVDFAKTGAPAEMPRSLKPR 937

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCTIQDA---YDLDLLVEGYED 2332
            EFPDFM+R DKPMY S GVLGKLYR  +   +   S  + + + A   YD DL V G+E 
Sbjct: 938  EFPDFMQRVDKPMYASLGVLGKLYRATINSTVQERSKFVWSKKMAEALYDHDLEVNGFEA 997

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
            F+  A+ HK+MY ++MS L+NYY  E E EILTGN+R K+ +LQRDNRRY ++KDRIL+S
Sbjct: 998  FLSTAQTHKDMYEEKMSFLMNYYEVESEDEILTGNMRNKATFLQRDNRRYGDMKDRILLS 1057

Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
             K+LQ+E +  F   CK  +HQ+LASAWYHVTY
Sbjct: 1058 MKNLQREARERFENSCKVGEHQRLASAWYHVTY 1090


>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
            gi|222868578|gb|EEF05709.1| hypothetical protein
            POPTR_0015s08500g [Populus trichocarpa]
          Length = 1110

 Score = 1149 bits (2971), Expect = 0.0
 Identities = 577/873 (66%), Positives = 684/873 (78%), Gaps = 3/873 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            +FLWVRTTD S IKSIG S+S CWEI +G          PY   D+  L L+      SA
Sbjct: 213  DFLWVRTTDISAIKSIGQSTSFCWEIGEGLEASDTFRNFPYYQEDMNRLDLEDGEEFCSA 272

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            SE VPL+   SD KL YE+LFQLNSLVHTQKISL AVD+DLI++L  L ++TA++ILQK+
Sbjct: 273  SETVPLIRCGSD-KLAYEVLFQLNSLVHTQKISLAAVDSDLIKILRNLTVNTAIIILQKL 331

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            HKL+ TC++P++F+K  L    + S + P  S   L  +N+MS HR L+TPSKI+CLGPE
Sbjct: 332  HKLKMTCYDPLSFVKQSL----RESLSSPPKS---LTENNIMSCHRALITPSKIFCLGPE 384

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
             ETSNY+VK+FA +ASDF+RVTFVEEDWSKL  NAIS S+++GIFAKP+RT IYHRILSI
Sbjct: 385  YETSNYVVKHFAQYASDFIRVTFVEEDWSKLPANAISTSIQRGIFAKPFRTGIYHRILSI 444

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LR+G VIG KRF FLAFSASQLRSNSVWMFASN  VKAEDIR+WMGCF+KIRSVSKCAAR
Sbjct: 445  LRDGFVIGAKRFEFLAFSASQLRSNSVWMFASNNGVKAEDIRKWMGCFDKIRSVSKCAAR 504

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S QT  V  Q VEI+PDIEVT DG+ YCFSDGIGKIS +FA+QVA KCGL++T
Sbjct: 505  MGQLFSSSLQTFVVPVQDVEIIPDIEVTTDGIDYCFSDGIGKISLSFAKQVAHKCGLSHT 564

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGGYKGV+AVDRNSFRKLSLR SMLKF+S NRMLN+TKWS++MPCYLNREI+ 
Sbjct: 565  PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFDSENRMLNVTKWSESMPCYLNREIIS 624

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LLSTLGV D+              KMLT  E+ALDVLE++   + K IL++MLLQGY P+
Sbjct: 625  LLSTLGVADEIFQALQQKQLYRLRKMLTNKESALDVLENLAWADSKNILVQMLLQGYEPN 684

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
            +EPYLSMMLQ++ EN L +LRSRCR+F+PKGR+L+GCLDE+GIL+YGQVY RITMTKAEL
Sbjct: 685  VEPYLSMMLQAYHENSLMELRSRCRIFVPKGRILIGCLDESGILDYGQVYVRITMTKAEL 744

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            Q   Q+FF+ VDE+T+ + G+V VTKNPCLHPGD              K  V+CIIFPQ 
Sbjct: 745  QCCDQSFFRKVDESTSTIIGEVAVTKNPCLHPGDIRVLEAVYDVELEEKGLVDCIIFPQN 804

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            G RPHPNECSGGDLDGD +FISWDE L+P  T  PMDY G R RIMDH VTLEEIQRFFV
Sbjct: 805  GGRPHPNECSGGDLDGDQFFISWDEGLLPCHTEAPMDYVGGRQRIMDHNVTLEEIQRFFV 864

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMI+DTLGAISTAHLVHAD EPDKA + KCLQLATLHSMAVDFAKTGA AEMP +LKPR
Sbjct: 865  DYMINDTLGAISTAHLVHADCEPDKARSEKCLQLATLHSMAVDFAKTGAPAEMPLYLKPR 924

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332
            EFPDFMER +K MYIS+GVLGKLYR +        S+ + +    +  YD DL V+G+ED
Sbjct: 925  EFPDFMERAEKQMYISDGVLGKLYRDIHDSTRQERSNFMWSKKIAEATYDQDLEVKGFED 984

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
            F+  A  +KE Y+++MS+L++YYGA+ E EILTGNLR +  YLQRDNR+Y ++KDRILVS
Sbjct: 985  FLGIASIYKEKYMEKMSTLMDYYGAKTEDEILTGNLRHRPTYLQRDNRKYGDVKDRILVS 1044

Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
             K+L+KE K WF   C   +HQ +ASAWYHVTY
Sbjct: 1045 LKNLKKEAKEWFESSCNPTEHQCMASAWYHVTY 1077


>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
            gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
            2 [Cucumis sativus]
          Length = 1117

 Score = 1144 bits (2960), Expect = 0.0
 Identities = 560/873 (64%), Positives = 689/873 (78%), Gaps = 3/873 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            ++LWVRTT+FS ++S+G S+S CWE+E+           P+      D+ L+      S 
Sbjct: 211  DYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQASDIFSCFPFYKETQKDIVLEDGEEFCST 270

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            SE VPL+ S     L YE+ +QLNSLVH QKISL A + DLI+ L  L++DTA+ +LQ++
Sbjct: 271  SEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKISLSAANQDLIDFLCTLDIDTALNVLQRL 330

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            H+L+  C++P++F+KT+LHV  +N K+ P SS  RL N N+M+ +RVLVTPS+IYCLGPE
Sbjct: 331  HQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSSQKRLSN-NVMNCYRVLVTPSRIYCLGPE 389

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LETSNY+VKNF+S+ASDF+RVTFVEEDWSKL   A++ S+++GI +KPYRT+IYHRI+++
Sbjct: 390  LETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTV 449

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LR+GIVIG KRF FLAFSASQLRSNSVWMFAS++ +KAE+IR+WMGCF KIRS+SKCAAR
Sbjct: 450  LRDGIVIGAKRFEFLAFSASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAAR 509

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S QT+ V  + VEI+PDIEV  DG+ YCFSDGIGKIS +FARQVA KCG+N+ 
Sbjct: 510  MGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHI 569

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGGYKGVIAVDRNSFRKLSLR SMLKFES N+MLN+TK  D+MPCYLNREI  
Sbjct: 570  PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIAT 629

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LLSTLGV+D++             +MLT  + AL+VLE+  G +   IL++ML  GY P+
Sbjct: 630  LLSTLGVKDESFEALQQEQLHLLKRMLTDKDVALNVLENFHGADSNNILVQMLNHGYEPN 689

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
            +EPYLSMMLQ+H+ N  SDLRSRCR+F+PKGR+L+GCLDETGILNYGQVYA IT+TK+EL
Sbjct: 690  IEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSEL 749

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            Q+  QN+F  +DET +++ GKVVVTKNPCLHPGD              K  V+C+IFPQK
Sbjct: 750  QSRNQNYFHTIDETKSILLGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQK 809

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            G RPH NECSGGDLDGDLYFISWDENLIP +T  PMDYTGRRPRIMDH+V LEEIQ+FFV
Sbjct: 810  GARPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFV 869

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMI+DTLGAISTAHLVHADREP KAL+ KCL+LA LHSMAVDFAKTGA AEMPR LKPR
Sbjct: 870  DYMINDTLGAISTAHLVHADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPR 929

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCTIQDA---YDLDLLVEGYED 2332
            EFPDFMER+DKPMYIS  VLGKLYR  VK      S ++ + + A   YD DL V+G+E 
Sbjct: 930  EFPDFMERFDKPMYISSNVLGKLYRAAVKSIEQERSRLVWSEEAARAIYDYDLEVDGFEA 989

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
            F+E A+ +KEMY+++MS L+NYYGAE E EIL G+LR ++ YLQRDNR+Y ++KDRIL+S
Sbjct: 990  FLEIAETYKEMYIEKMSILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLS 1049

Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
             K+L+KEVK WF   C   + + +ASAWYHVTY
Sbjct: 1050 VKNLRKEVKEWFENSCDPLNRRMMASAWYHVTY 1082


>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
          Length = 1122

 Score = 1138 bits (2944), Expect = 0.0
 Identities = 564/875 (64%), Positives = 694/875 (79%), Gaps = 6/875 (0%)
 Frame = +2

Query: 5    FLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSAS 184
            F+WVRTTDFS +KSIG S+S CWEIE+           P    ++ DL L+      S +
Sbjct: 214  FMWVRTTDFSRLKSIGHSTSFCWEIEEESSDSDVFRSFPLYRENLKDLSLEDGEEFCSPT 273

Query: 185  EFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKMH 364
            E VPLV    D KLPYE LFQLNSLVHTQKISL +VD +LI++++ L+ +T  +I QK+H
Sbjct: 274  ETVPLVKCRLDTKLPYEALFQLNSLVHTQKISLASVDDELIDLIASLDDETKAVIFQKLH 333

Query: 365  KLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPEL 544
            K+ STC+EP+ F+KT+LHVL    K+   SS  RL ++N+MS HR L+TPSKIYCLGPEL
Sbjct: 334  KMSSTCYEPLRFVKTQLHVLSIKKKSLRPSSQKRLADNNIMSCHRALITPSKIYCLGPEL 393

Query: 545  ETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSIL 724
            ETSN++VK+FAS+ASDF+R+TFVEEDWSKL  NA+S S+++GIFAKP+RT IY R+L+IL
Sbjct: 394  ETSNHVVKHFASYASDFMRITFVEEDWSKLPINAVSTSLQKGIFAKPFRTDIYKRVLTIL 453

Query: 725  REGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAARM 904
            R+GIVIG+KRF FLAFSASQLRSNSVW+FASN+ VKAEDIREWMG F  IRSVSKCAARM
Sbjct: 454  RDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDKVKAEDIREWMGSFTNIRSVSKCAARM 513

Query: 905  GQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT- 1081
            GQLFS+S QT E+ PQ V+I+PDIE+T+DG++YCFSDGIGKIS +FA+Q+AQK  L+ + 
Sbjct: 514  GQLFSSSKQTFEMAPQDVDIIPDIELTSDGINYCFSDGIGKISLSFAKQLAQKLKLDQSR 573

Query: 1082 -PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIV 1258
             PSAFQIRYGGYKGVIAVDR+SFRKLS+R SMLKFES NRML +TKWS++MPC+LNREI+
Sbjct: 574  IPSAFQIRYGGYKGVIAVDRHSFRKLSMRNSMLKFESKNRMLCVTKWSESMPCFLNREII 633

Query: 1259 ILLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAP 1438
             LLSTLGV+D+A            GKMLT  EAALDVLES+ G + + IL++ML   Y P
Sbjct: 634  SLLSTLGVKDEALLAMQEEQLQLLGKMLTDREAALDVLESLSGADSRSILVKMLNGFYEP 693

Query: 1439 SLEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAE 1618
            + EPYLSMML++H+  QLSDL+SRCR+F+PKGRVL+GCLDETGILNYGQV+ RIT+TK +
Sbjct: 694  NSEPYLSMMLKAHYAYQLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVFVRITVTKTK 753

Query: 1619 LQNGQQNFFQM-VDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFP 1795
             + G +N   +  D++T ++ GKVVVTKNPCLHPGD              K   +C++FP
Sbjct: 754  EKIGDENLQNVDGDDSTRIIVGKVVVTKNPCLHPGDIRVLDAIYNEELEEKGLRDCLVFP 813

Query: 1796 QKGERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRF 1975
            QKG RPHPNECSGGDLDGDL+FISWD++LIP QT  PMDYTGRRPRIMDH+VTLEEI +F
Sbjct: 814  QKGPRPHPNECSGGDLDGDLFFISWDKDLIPPQTDNPMDYTGRRPRIMDHKVTLEEIHQF 873

Query: 1976 FVDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLK 2155
            FVDYMI+DTLGAISTAHLVHADREP+KA + KCL+LA LHSMAVDFAKTGA AEMPR LK
Sbjct: 874  FVDYMINDTLGAISTAHLVHADREPEKARSRKCLELAELHSMAVDFAKTGAPAEMPRALK 933

Query: 2156 PREFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGY 2326
            PREFPDFMER+DKPMYIS GVLGKLYR +V+      S+++ +    ++AYD  L V G+
Sbjct: 934  PREFPDFMERFDKPMYISNGVLGKLYRALVESTTQVRSNIVLSEKFAEEAYDHQLEVNGF 993

Query: 2327 EDFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRIL 2506
            E F+E A +HKEMY  +MSSL+++Y AE E E+LTGNL+ ++ YLQRDNRRY ++KDRIL
Sbjct: 994  EAFLETASSHKEMYAQKMSSLMSFYDAETEDEMLTGNLQNRASYLQRDNRRYGDMKDRIL 1053

Query: 2507 VSAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
            +S K LQ+E K WF   C+  ++Q +ASAWYHVTY
Sbjct: 1054 ISVKDLQREAKEWFESDCQPHEYQLMASAWYHVTY 1088


>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score = 1138 bits (2943), Expect = 0.0
 Identities = 578/874 (66%), Positives = 676/874 (77%), Gaps = 4/874 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            +FLWVRTTDFS IKSIG S+S  WE   G          P    D+    L+  G   S 
Sbjct: 213  DFLWVRTTDFSRIKSIGQSTSFYWEFNAGFSISDMSTYLPCYREDIQSPSLEARGEFSSP 272

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            SE VPLV  PSD KL YEILFQLN+LVHTQKIS+ AVDTDLI +LS L ++TA+MILQK+
Sbjct: 273  SEIVPLVKFPSDSKLAYEILFQLNALVHTQKISIAAVDTDLIGILSVLPVETAVMILQKL 332

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
              LQS C+ PV+F+K +L   GKN +  P S   RL NHN+MS HR L+TP+KIYCLGPE
Sbjct: 333  RLLQSPCYNPVSFVKAKLPT-GKNFRI-PLSVSERLKNHNVMSCHRALITPTKIYCLGPE 390

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LET+NY+VKNFA +ASDF+RVTFVEEDWSKLS NAIS  V  G+F++P++TKIY RILSI
Sbjct: 391  LETANYVVKNFAEYASDFMRVTFVEEDWSKLSANAISTGVHLGVFSRPFKTKIYDRILSI 450

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            L+ GIVIG KRF FLAFSASQLRSNSVWMFASN+ VKAEDIREWMGCF KIRS+SKCA+R
Sbjct: 451  LQNGIVIGDKRFKFLAFSASQLRSNSVWMFASNDEVKAEDIREWMGCFKKIRSISKCASR 510

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S  T+ V  Q VEI+ DIEV  DG++YCFSDGIGKIS  FARQVA+KCGLN+ 
Sbjct: 511  MGQLFSSSMPTLVVPVQDVEIIDDIEVKTDGINYCFSDGIGKISLPFARQVAEKCGLNHI 570

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGGYKGV+AVDRNSF K+SLR SMLKFES  RMLN+TKWS++MPC+LNREIV 
Sbjct: 571  PSAFQIRYGGYKGVVAVDRNSFWKMSLRDSMLKFESKVRMLNVTKWSESMPCFLNREIVT 630

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            L STLG++D+             GKMLT  EAALD L+S+GG   K IL+ M LQ   P+
Sbjct: 631  LFSTLGIKDEVFERMQEEQLCLLGKMLTNREAALDTLQSLGGVNSKNILVEM-LQFDEPN 689

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
            ++PYLSMMLQ+H+EN LSDL+SRCR+F+PKGR+L+GCLDETG LNYGQVY  I M KAEL
Sbjct: 690  VQPYLSMMLQAHYENLLSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAEL 749

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            +   Q++F+ VDE TA+V GKVVVTKNPCLHPGD              K  V+C++FP+K
Sbjct: 750  ECADQSYFRKVDEETAIVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPEK 809

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            GERPHPNECSGGDLDGD +FISWD++LIP QT  PMDYTGRRPRIMDHEVTLEEIQ+FFV
Sbjct: 810  GERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFV 869

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMI+DTLGAISTAHLVHADREP KA +  CL LATLHSMAVDFAKTGA AEMPR LKPR
Sbjct: 870  DYMINDTLGAISTAHLVHADREPYKARSENCLALATLHSMAVDFAKTGAPAEMPRALKPR 929

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332
            EFPDFM+R +KPMY S GVLGKLYR  +   +   S  + T    + AYD DL V G+E 
Sbjct: 930  EFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQIRSKFVWTKEMAELAYDHDLEVNGFES 989

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
             I  A+ HKEMY +RMS L++YY  E E EILTGN+  K+ +L RDNRRY E+K+RI++S
Sbjct: 990  LISVAETHKEMYEERMSLLMSYYDVEYEDEILTGNMYNKAQFLLRDNRRYGEMKERIVLS 1049

Query: 2513 AKSLQKEVKRWF-TGCCKEDDHQKLASAWYHVTY 2611
             K LQ+E K WF + C K D+HQKLASAWY+VTY
Sbjct: 1050 VKDLQREAKEWFKSSCSKADEHQKLASAWYYVTY 1083


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score = 1137 bits (2940), Expect = 0.0
 Identities = 576/874 (65%), Positives = 674/874 (77%), Gaps = 4/874 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            +FLWVRTTDFS IKSIG S+S  WE   G          P    D+    L+      S 
Sbjct: 213  DFLWVRTTDFSRIKSIGQSTSFYWEFNAGFSISDMSTYLPCYREDIQSPSLEARREFSSP 272

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            SE VPLV  PSD KL YEILFQLN+LVHTQKIS+ AVDTDLI +LS L ++TA+MILQK+
Sbjct: 273  SEIVPLVKFPSDSKLAYEILFQLNALVHTQKISIAAVDTDLIGILSGLPVETAVMILQKL 332

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
              LQS C+ PV+F+K +L   GKN +  P S   RL NHN+MS  R L+TP+KIYCLGPE
Sbjct: 333  RLLQSPCYNPVSFVKAKLPT-GKNYRI-PLSVSERLKNHNVMSCRRALITPTKIYCLGPE 390

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LET+NY+VKNF  +ASDF+RVTFVEEDWSKLS NAIS  V  G+F++P++TKIY RIL +
Sbjct: 391  LETANYVVKNFVEYASDFMRVTFVEEDWSKLSANAISTGVHLGVFSRPFKTKIYDRILYV 450

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            L+ GIVIG KRF FLAFSASQLRSNSVWMFASN+ VKAEDIREWMGCF KIRS+SKCA+R
Sbjct: 451  LQNGIVIGDKRFEFLAFSASQLRSNSVWMFASNDEVKAEDIREWMGCFKKIRSISKCASR 510

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S  T+ V  Q VEI+ DIEV  DG++YCFSDGIGKIS  FARQVA+KCGLN+ 
Sbjct: 511  MGQLFSSSMPTLVVPVQDVEIIDDIEVKTDGINYCFSDGIGKISLPFARQVAEKCGLNHI 570

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGGYKGV+AVDRNSF K+SLR SMLKFES  RMLN+TKWS++MPC+LNREIV 
Sbjct: 571  PSAFQIRYGGYKGVVAVDRNSFWKMSLRDSMLKFESKVRMLNVTKWSESMPCFLNREIVT 630

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            L STLG++D+             GKMLT  EAALD L+S+GG   K IL+ M LQ Y P+
Sbjct: 631  LFSTLGIKDEVFERMQEEQLCLLGKMLTNREAALDTLQSLGGVNSKNILVEM-LQFYEPN 689

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
            ++PYLSMMLQ+H+EN LSDL+SRCR+F+PKGR+L+GCLDETG LNYGQVY  I M KAEL
Sbjct: 690  VQPYLSMMLQAHYENLLSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAEL 749

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            +   Q++F+ VDE TA+V GKVVVTKNPCLHPGD              K  V+C++FPQK
Sbjct: 750  ECADQSYFRKVDEETAIVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPQK 809

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            GERPHPNECSGGDLDGD +FISWD++LIP QT  PMDYTGRRPRIMDHEVTLEEIQ+FFV
Sbjct: 810  GERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFV 869

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMI+DTLGAISTAHLVHADREPDKA +  CL LATLHSMAVDFAKTGA AEMPR LKPR
Sbjct: 870  DYMINDTLGAISTAHLVHADREPDKACSENCLALATLHSMAVDFAKTGAPAEMPRALKPR 929

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCTIQDA---YDLDLLVEGYED 2332
            EFPDFM+R +KPMY S GVLGKLYR  +   +   S  + T + A   YD DL V G+E 
Sbjct: 930  EFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQTRSKFVWTKEMAELVYDHDLEVNGFES 989

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
             I  A+ HKEMY +RMS L++YY  E E EILTGN+  K+ +L RDNRRY E+K+RI++S
Sbjct: 990  LISVAETHKEMYEERMSLLMSYYDVEYEDEILTGNIYNKAQFLLRDNRRYGEMKERIVLS 1049

Query: 2513 AKSLQKEVKRWF-TGCCKEDDHQKLASAWYHVTY 2611
             K LQ+E K WF + C K D+HQKLASAWY+VTY
Sbjct: 1050 VKDLQREAKEWFKSSCSKADEHQKLASAWYYVTY 1083


>ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X2 [Glycine
            max]
          Length = 941

 Score = 1129 bits (2921), Expect = 0.0
 Identities = 558/874 (63%), Positives = 687/874 (78%), Gaps = 4/874 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            EFLWVRTTDFS +KSIG S+S CWEI +           P    ++ DL L+      S+
Sbjct: 33   EFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLALDVFKSFPLYKENLRDLALEDGEEFCSS 92

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            +E VPLV   S  KLPYE LFQLNSLVHTQKISL +VD +LI++L+ L+ +T  +I  K+
Sbjct: 93   TEAVPLVKRASQSKLPYEALFQLNSLVHTQKISLASVDDELIDLLAGLDEETRAVIFLKL 152

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            HK+  TC+EP+ F+KT+LHVL    K  P SS  RL + N+MS HR L+TP+KIYCLGPE
Sbjct: 153  HKMSFTCYEPLKFVKTQLHVLSNKKKGLPQSSQKRLTDSNIMSCHRALITPTKIYCLGPE 212

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LETSN++VK+FASHASDF+R+TFVEE+W+KL  NA+S  V++G+F+KP +T+IY RIL+I
Sbjct: 213  LETSNHVVKHFASHASDFMRITFVEENWNKLPTNAVSTGVQKGLFSKPLKTEIYKRILTI 272

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LR+GIVIG+KRF FLAFSASQLRSNSVW+FASN+ +KA DIREWMGCFN IRSVSKCAAR
Sbjct: 273  LRDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAAR 332

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S QT EV  Q VEI+PD+EV +DGVSYCFSDGIGKISQ+FARQVAQK  L++T
Sbjct: 333  MGQLFSSSMQTFEVVSQDVEIIPDVEVISDGVSYCFSDGIGKISQSFARQVAQKLKLDHT 392

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGG+KGVIAVDR SFRKLSLR SMLKFES N ML +TKWS++MPC+LNREI+ 
Sbjct: 393  PSAFQIRYGGFKGVIAVDRRSFRKLSLRSSMLKFESKNSMLCVTKWSESMPCFLNREIIS 452

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LLSTLGV+D+             G+MLT ++AAL+VLES+ G + K IL++ML +   P+
Sbjct: 453  LLSTLGVKDEVLLAMQHDQLDLLGRMLTDSKAALEVLESLNGADSKSILVKMLHEFNEPN 512

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
             EPYLSMML++++  QLSDL+SRCR+F+PKGRVLVGCLDETG+LNYGQV+ RIT+TK   
Sbjct: 513  SEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGRVLVGCLDETGLLNYGQVFVRITVTKTRE 572

Query: 1622 QNGQQNFFQM-VDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQ 1798
            + G +N  ++  D+ T ++ GKVVVTKNPCLHPGD              K   +C++FPQ
Sbjct: 573  KFGDENLRKVDGDDNTCIIVGKVVVTKNPCLHPGDIRVLDAIYSEELEEKGLRDCLVFPQ 632

Query: 1799 KGERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFF 1978
            KG RPHPNECSGGDLDGDL+FISWD++LIP QT  PMDYTGRRPRIMDH+VTLEEIQ+FF
Sbjct: 633  KGHRPHPNECSGGDLDGDLFFISWDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQFF 692

Query: 1979 VDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKP 2158
            VDYMI+DTLGAISTAHLVHADRE DKA + KCL+LA LHSMAVDFAKTGA A MPR LKP
Sbjct: 693  VDYMINDTLGAISTAHLVHADREQDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKP 752

Query: 2159 REFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYE 2329
            REFPDFMER DKPMYIS+GVLGKLYR +++  +      + +    ++AYD  L V G+E
Sbjct: 753  REFPDFMERVDKPMYISKGVLGKLYRAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNGFE 812

Query: 2330 DFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILV 2509
             F+E A  HKEMY ++MSSL+++YGAE E E+L GNL+ ++ YLQRDNRRY ++KDRIL+
Sbjct: 813  AFLETASTHKEMYAEKMSSLMDFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILL 872

Query: 2510 SAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
            S K+LQ+E K WF   C+  +++ +ASAWYHVTY
Sbjct: 873  SVKNLQREAKEWFETSCEPHEYKPMASAWYHVTY 906


>ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine
            max]
          Length = 1121

 Score = 1129 bits (2921), Expect = 0.0
 Identities = 558/874 (63%), Positives = 687/874 (78%), Gaps = 4/874 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            EFLWVRTTDFS +KSIG S+S CWEI +           P    ++ DL L+      S+
Sbjct: 213  EFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLALDVFKSFPLYKENLRDLALEDGEEFCSS 272

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            +E VPLV   S  KLPYE LFQLNSLVHTQKISL +VD +LI++L+ L+ +T  +I  K+
Sbjct: 273  TEAVPLVKRASQSKLPYEALFQLNSLVHTQKISLASVDDELIDLLAGLDEETRAVIFLKL 332

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            HK+  TC+EP+ F+KT+LHVL    K  P SS  RL + N+MS HR L+TP+KIYCLGPE
Sbjct: 333  HKMSFTCYEPLKFVKTQLHVLSNKKKGLPQSSQKRLTDSNIMSCHRALITPTKIYCLGPE 392

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LETSN++VK+FASHASDF+R+TFVEE+W+KL  NA+S  V++G+F+KP +T+IY RIL+I
Sbjct: 393  LETSNHVVKHFASHASDFMRITFVEENWNKLPTNAVSTGVQKGLFSKPLKTEIYKRILTI 452

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LR+GIVIG+KRF FLAFSASQLRSNSVW+FASN+ +KA DIREWMGCFN IRSVSKCAAR
Sbjct: 453  LRDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAAR 512

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S QT EV  Q VEI+PD+EV +DGVSYCFSDGIGKISQ+FARQVAQK  L++T
Sbjct: 513  MGQLFSSSMQTFEVVSQDVEIIPDVEVISDGVSYCFSDGIGKISQSFARQVAQKLKLDHT 572

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGG+KGVIAVDR SFRKLSLR SMLKFES N ML +TKWS++MPC+LNREI+ 
Sbjct: 573  PSAFQIRYGGFKGVIAVDRRSFRKLSLRSSMLKFESKNSMLCVTKWSESMPCFLNREIIS 632

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LLSTLGV+D+             G+MLT ++AAL+VLES+ G + K IL++ML +   P+
Sbjct: 633  LLSTLGVKDEVLLAMQHDQLDLLGRMLTDSKAALEVLESLNGADSKSILVKMLHEFNEPN 692

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
             EPYLSMML++++  QLSDL+SRCR+F+PKGRVLVGCLDETG+LNYGQV+ RIT+TK   
Sbjct: 693  SEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGRVLVGCLDETGLLNYGQVFVRITVTKTRE 752

Query: 1622 QNGQQNFFQM-VDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQ 1798
            + G +N  ++  D+ T ++ GKVVVTKNPCLHPGD              K   +C++FPQ
Sbjct: 753  KFGDENLRKVDGDDNTCIIVGKVVVTKNPCLHPGDIRVLDAIYSEELEEKGLRDCLVFPQ 812

Query: 1799 KGERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFF 1978
            KG RPHPNECSGGDLDGDL+FISWD++LIP QT  PMDYTGRRPRIMDH+VTLEEIQ+FF
Sbjct: 813  KGHRPHPNECSGGDLDGDLFFISWDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQFF 872

Query: 1979 VDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKP 2158
            VDYMI+DTLGAISTAHLVHADRE DKA + KCL+LA LHSMAVDFAKTGA A MPR LKP
Sbjct: 873  VDYMINDTLGAISTAHLVHADREQDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKP 932

Query: 2159 REFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYE 2329
            REFPDFMER DKPMYIS+GVLGKLYR +++  +      + +    ++AYD  L V G+E
Sbjct: 933  REFPDFMERVDKPMYISKGVLGKLYRAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNGFE 992

Query: 2330 DFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILV 2509
             F+E A  HKEMY ++MSSL+++YGAE E E+L GNL+ ++ YLQRDNRRY ++KDRIL+
Sbjct: 993  AFLETASTHKEMYAEKMSSLMDFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILL 1052

Query: 2510 SAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
            S K+LQ+E K WF   C+  +++ +ASAWYHVTY
Sbjct: 1053 SVKNLQREAKEWFETSCEPHEYKPMASAWYHVTY 1086


>gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris]
          Length = 1119

 Score = 1118 bits (2893), Expect = 0.0
 Identities = 551/873 (63%), Positives = 684/873 (78%), Gaps = 3/873 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            EFLWVRTTDFS +KSIG S+S CWEI +           P    ++ DL L+      S+
Sbjct: 212  EFLWVRTTDFSALKSIGHSTSFCWEIAEEQLASDVFTSLPLYKENLRDLVLEDGEEFCSS 271

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            +E VPLV   S  KLPYE LFQLNSLVHTQKISL +VD +LI++L  L+ +   +I QK+
Sbjct: 272  TEAVPLVKCASQSKLPYEALFQLNSLVHTQKISLASVDDELIDLLGGLDEEIRAVIFQKL 331

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            H++  TC++P+ F+KT+LHVL    ++QP SS  RL+++N+MS HR LVTP+KIYCLGPE
Sbjct: 332  HQMGFTCYDPLKFVKTQLHVLSNKKRSQPLSSQKRLIDNNIMSCHRALVTPTKIYCLGPE 391

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LETSN++VK+FAS ASDF+R+TFVEE+W+KL   A+S  V++GIF+KP++T+IY RIL+I
Sbjct: 392  LETSNHVVKHFASCASDFMRITFVEENWNKLPNYAVSTGVQKGIFSKPFKTEIYKRILTI 451

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LR+GIVIG+KRF FLAFSASQLRSNSVW+FASN+ VKA DIREWMGCFN IRSVSKCAAR
Sbjct: 452  LRDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNVKATDIREWMGCFNNIRSVSKCAAR 511

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S QT EV PQ VE++PDIEVT+DGVSYCFSDGIGKISQ+F RQVAQK  L++T
Sbjct: 512  MGQLFSSSMQTFEVAPQDVEVIPDIEVTSDGVSYCFSDGIGKISQSFGRQVAQKLKLDHT 571

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIR+GGYKGVI VDR+SFRKLSLR SMLKFES NRML +TKWS++MPC+LNREI+ 
Sbjct: 572  PSAFQIRFGGYKGVITVDRHSFRKLSLRNSMLKFESKNRMLCVTKWSESMPCFLNREIIS 631

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LLSTLGV+D+A            G+MLT ++AALDVLE + G + + IL++ML +   P+
Sbjct: 632  LLSTLGVKDEAFLARQQDQLNLLGRMLTDSKAALDVLEGLNGADSRSILVKMLHEFNEPN 691

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
             EPYLSMML++++  QLSDL+SR R+F+PKGRVLVGCLDETG+LNYG+V+ R+T+ +   
Sbjct: 692  SEPYLSMMLKAYYAYQLSDLKSRSRIFVPKGRVLVGCLDETGLLNYGEVFVRVTVKRTTE 751

Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801
            +          D++T ++ GKVVVTKNPCLHPGD              K   +C++FPQ 
Sbjct: 752  KFDDNLRKGGDDDSTRIIVGKVVVTKNPCLHPGDVRVLDAIYNEELEEKGLRDCLVFPQN 811

Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981
            G RPHPNECSGGDLDGDL+FISWD++LIP QT  PMDYTGRRPRIMDH+VTLEEIQ FFV
Sbjct: 812  GHRPHPNECSGGDLDGDLFFISWDKDLIPAQTEAPMDYTGRRPRIMDHKVTLEEIQHFFV 871

Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161
            DYMI+DTLGAISTAHLVHADREPDKA + KCL+LA LHSMAVDFAKTGA A MPR LKPR
Sbjct: 872  DYMINDTLGAISTAHLVHADREPDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKPR 931

Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332
            EFPDFMER +KPMYIS+GVLGKLYR +++  +      + +    ++AYD  L V G+E 
Sbjct: 932  EFPDFMERVEKPMYISKGVLGKLYRAIIESQMQIKYSFVWSEKLAEEAYDRSLEVNGFEA 991

Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512
            F+E A +HKEMY  +MSSL+N+YGAE E E+L GNL+ ++ YLQRDNRRY ++KDRIL+S
Sbjct: 992  FLETASSHKEMYAQKMSSLMNFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILLS 1051

Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
             K+LQ+E K WF   C+  +++ +ASAWYHVTY
Sbjct: 1052 VKNLQREAKEWFETSCQPHEYRPMASAWYHVTY 1084


>ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Glycine max]
          Length = 1120

 Score = 1118 bits (2891), Expect = 0.0
 Identities = 550/874 (62%), Positives = 685/874 (78%), Gaps = 4/874 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            EFLWVRTTDFS +KSIG S+S CWEI +           P    ++ DL L+    + S 
Sbjct: 212  EFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLASDVFTSFPLYKENLRDLALEDREELCSL 271

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            +E VPLV   +  KLPYE +FQLNSLVHTQKISL +VD +LI++L+ L+ +T  ++ QK+
Sbjct: 272  TEAVPLVKHATQSKLPYEAVFQLNSLVHTQKISLASVDDELIDLLADLDEETRAVVFQKL 331

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            HK+  TC+EP+ F+KT+LHVL    K    S  NRL + N+MS HR L+TP+KIYCLGPE
Sbjct: 332  HKMSFTCYEPLKFVKTQLHVLSNKKKGLLQSPQNRLTDSNIMSCHRALITPTKIYCLGPE 391

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LETSN++VK+FAS ASDF+R+TFVEE+W+KL  NA+S  V++GIF+KP +T+IY RIL+I
Sbjct: 392  LETSNHVVKHFASLASDFMRITFVEENWNKLPTNAVSTGVQKGIFSKPLKTEIYKRILTI 451

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LR+GIVIG+KRF FLAFSASQLRSNSVW+FASN+ +KA DIREWMGCFN IRSVSKCAAR
Sbjct: 452  LRDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAAR 511

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081
            MGQLFS+S QT EV  + VE++PDIEVT+DGVSYCFSDGIGKISQ FARQVAQK  L++T
Sbjct: 512  MGQLFSSSMQTFEVASEDVEMIPDIEVTSDGVSYCFSDGIGKISQCFARQVAQKLNLDHT 571

Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261
            PSAFQIRYGG+KGVIA+DR+SFRKLSLR SMLKFES NRML +TKWS++MPC+LNREI+ 
Sbjct: 572  PSAFQIRYGGFKGVIAIDRHSFRKLSLRSSMLKFESNNRMLCVTKWSESMPCFLNREIIS 631

Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441
            LL+TLGV+D+             G+MLT ++AALDVLES+ G + K IL++ML +   P+
Sbjct: 632  LLTTLGVKDEVLLAMQQDQLDLLGRMLTDSKAALDVLESLNGADSKSILVKMLHEFNEPN 691

Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621
             EPYLSMML++++  QLSDL+SRCR+F+PKGRVLVGCLDETG+LNYGQV+ RIT+ K   
Sbjct: 692  SEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGRVLVGCLDETGLLNYGQVFVRITVAKTRE 751

Query: 1622 QNGQQNFFQM-VDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQ 1798
              G +N  ++  D++T ++ GKVVVTKNPCLHPGD                  +C++FPQ
Sbjct: 752  NFGDENLRKVDGDDSTRIIVGKVVVTKNPCLHPGDIRVLDAIYSKELEENGLRDCLVFPQ 811

Query: 1799 KGERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFF 1978
            KG RPHPNECSGGDLDGDL+F+SWD++LIP QT  PMDYTGRRPRIMDH+VTLEEIQ+FF
Sbjct: 812  KGHRPHPNECSGGDLDGDLFFLSWDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQFF 871

Query: 1979 VDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKP 2158
            VDYMI+DTLGAISTAHLVHADRE DKA + KCL+LA LHSMAVDFAKTGA A MPR LKP
Sbjct: 872  VDYMINDTLGAISTAHLVHADREQDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKP 931

Query: 2159 REFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYE 2329
            REFPDFMER DKPMYIS+GVLGKLY  +++  +      + +    ++AYD  L V G+E
Sbjct: 932  REFPDFMERVDKPMYISKGVLGKLYHAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNGFE 991

Query: 2330 DFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILV 2509
             F+E A  HKEMY ++MSSL+++YGAE E E+L GN++ ++ YLQRDNRRY ++KDRIL+
Sbjct: 992  AFLETASTHKEMYAEKMSSLMDFYGAETEDEMLLGNVQNRASYLQRDNRRYGDMKDRILL 1051

Query: 2510 SAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
            S K+LQ+E K WF   C+  +++ +ASAWYHVTY
Sbjct: 1052 SVKNLQREAKEWFETSCQPREYKPMASAWYHVTY 1085


>ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago truncatula]
            gi|355509999|gb|AES91141.1| Rna-dependent RNA polymerase
            [Medicago truncatula]
          Length = 1308

 Score = 1113 bits (2879), Expect = 0.0
 Identities = 549/876 (62%), Positives = 690/876 (78%), Gaps = 6/876 (0%)
 Frame = +2

Query: 2    EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181
            EF+WVRTTDFS +KSIG S+S  WEI +           P    ++ DL L+      S 
Sbjct: 214  EFMWVRTTDFSTLKSIGHSTSFFWEIVEESFDSDVFRSFPLYRENLKDLSLEDGEKFCSP 273

Query: 182  SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361
            +E VPLV    D KLPYE LFQLNSLVHTQKISL +V+ +LI++L+ L+ +T  +I QK+
Sbjct: 274  TETVPLVKCRLDSKLPYESLFQLNSLVHTQKISLASVNDELIDLLASLDAETKAVIFQKL 333

Query: 362  HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541
            HK+ STC+EP+ +++T+LHVL    K+   S   RLV++N+MS HR L+TPSKIYCLGPE
Sbjct: 334  HKMNSTCYEPLKYVRTQLHVLSIKKKSVLPSQQKRLVDNNIMSCHRALITPSKIYCLGPE 393

Query: 542  LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721
            LETSN++VK+FA++ASDF+R+TFVEEDWSKL  NAIS+++++G+F++P RT+IY R+L+I
Sbjct: 394  LETSNHVVKHFAAYASDFMRITFVEEDWSKLPNNAISITLKKGMFSRPLRTEIYKRVLNI 453

Query: 722  LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901
            LR+GI+IG+KRF FLAFSASQLRSNSVW+FASN+ VKA DIREWMG FN IRSVSKCAAR
Sbjct: 454  LRDGILIGSKRFEFLAFSASQLRSNSVWLFASNDKVKAADIREWMGSFNNIRSVSKCAAR 513

Query: 902  MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGL--N 1075
            MGQLFS+S QT E+ PQ V+++PDIE+T+DG+ YCFSDGIGKISQ+FARQ+A+K  L  N
Sbjct: 514  MGQLFSSSRQTFEMAPQDVDLIPDIEITSDGIDYCFSDGIGKISQSFARQLAEKLKLDEN 573

Query: 1076 YTPSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREI 1255
              PSAFQIRYGGYKGVIAVDR+SF+KLSLR+SMLKFES NRML +TKWS++MPC+LNREI
Sbjct: 574  RIPSAFQIRYGGYKGVIAVDRHSFKKLSLRKSMLKFESKNRMLCVTKWSESMPCFLNREI 633

Query: 1256 VILLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYA 1435
            + LLSTLG++D+A            GKMLT  EAALDVLES+ G +   IL++ML + Y 
Sbjct: 634  ISLLSTLGIKDEALLALQEDQLQLLGKMLTDKEAALDVLESLNGADSNSILVKMLHRFYE 693

Query: 1436 PSLEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKA 1615
            P+ EPYLSMML++H+  QLSDL+SRCR+F+PKGRVL+GCLDETG+LNYGQV+ RIT+ K 
Sbjct: 694  PNSEPYLSMMLKAHYTYQLSDLKSRCRIFVPKGRVLIGCLDETGLLNYGQVFVRITVAKT 753

Query: 1616 ELQNGQQNFFQM-VDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIF 1792
            + + G +N   +  D++T ++ GKVVVTKNPCLHPGD              K   +C++F
Sbjct: 754  KEKFGDENLRNVDGDDSTRIIVGKVVVTKNPCLHPGDIRVLDAVYSEELEEKGLRDCLVF 813

Query: 1793 PQKGERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQR 1972
            PQKG RPHPNECSGGDLDGDL+FISWD++LIP QT  PMDYTGRRPRIMDH+VTLEEI +
Sbjct: 814  PQKGHRPHPNECSGGDLDGDLFFISWDKDLIPAQTENPMDYTGRRPRIMDHKVTLEEIHQ 873

Query: 1973 FFVDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFL 2152
            FFVDYMI+DTLGAISTAHLVHADRE DKA + KCL+LA LHSMAVDFAKTGA AEMPR L
Sbjct: 874  FFVDYMINDTLGAISTAHLVHADREHDKAKSRKCLELAELHSMAVDFAKTGAPAEMPRSL 933

Query: 2153 KPREFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEG 2323
            KPREFPDFMER++KPMYIS+GVLGKLYR  +   +    D++ +    ++AYD  L V+G
Sbjct: 934  KPREFPDFMERFEKPMYISKGVLGKLYRATIDSNLQVRFDMVMSEKFAKEAYDHQLEVDG 993

Query: 2324 YEDFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRI 2503
            +E F+E A +H++MY  +M SL+++YGA  E E+LTGNL+ ++ YLQRDNRRY ++KDRI
Sbjct: 994  FEVFLETALSHRDMYAQKMISLMSFYGATTEDEMLTGNLQNRASYLQRDNRRYGDMKDRI 1053

Query: 2504 LVSAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
            L+S K LQ E K WF   C+  ++Q +ASAWYHVTY
Sbjct: 1054 LISVKDLQLEAKEWFESDCQPHEYQLMASAWYHVTY 1089



 Score =  158 bits (399), Expect = 1e-35
 Identities = 95/226 (42%), Positives = 125/226 (55%)
 Frame = +2

Query: 1934 IMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDF 2113
            I+ H  +  +I +FFVDYMI DTLGAISTAHLVHAD E +KA + KCL+LA LHSMAVDF
Sbjct: 1110 ILLHIKSANKIHKFFVDYMIKDTLGAISTAHLVHADCESNKAKSRKCLELAELHSMAVDF 1169

Query: 2114 AKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCTIQD 2293
            AKTGA AEMPR LKP+EFPDFMER++KPMY+S+GVLGKLYR +V+  +   S        
Sbjct: 1170 AKTGALAEMPRVLKPKEFPDFMERFEKPMYVSKGVLGKLYRALVESTMQLTS-------- 1221

Query: 2294 AYDLDLLVEGYEDFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDN 2473
                        +F+ +       +L +   ++N                 K + LQ + 
Sbjct: 1222 ------------NFVSSGN-----FLSKKHMIINL----------------KLMDLQLEV 1248

Query: 2474 RRYFELKDRILVSAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611
            + +FE                       C+  +HQ +ASAWYHV +
Sbjct: 1249 KEWFE---------------------SDCQPHEHQLMASAWYHVIH 1273