BLASTX nr result
ID: Atropa21_contig00015229
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00015229 (2611 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 1539 0.0 ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 1527 0.0 gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 1523 0.0 ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 1214 0.0 ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici... 1209 0.0 gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus pe... 1200 0.0 ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 1196 0.0 gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] 1187 0.0 ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 1173 0.0 gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobro... 1169 0.0 ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 1149 0.0 ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 1144 0.0 ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 1138 0.0 gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 1138 0.0 gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 1137 0.0 ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 1129 0.0 ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 1129 0.0 gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus... 1118 0.0 ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 1118 0.0 ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago trunc... 1113 0.0 >ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum] Length = 1119 Score = 1539 bits (3984), Expect = 0.0 Identities = 771/873 (88%), Positives = 794/873 (90%), Gaps = 3/873 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 EFLWVRTTDFS IKSIGCSSSLCWE EDG P N DVIDL LDKVG+IYS Sbjct: 212 EFLWVRTTDFSNIKSIGCSSSLCWETEDGWLSSDLLSSLPCCNKDVIDLDLDKVGDIYSG 271 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 SEFVPLV PSDLKLPYEILFQLNSLV TQKISLGAV+ DLIEVLSKLELDTAMMILQKM Sbjct: 272 SEFVPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAVNPDLIEVLSKLELDTAMMILQKM 331 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 HKLQSTCFEP+TFIKTRLHVLGKN+KNQ SSSY+RLVNH+MMSVHRVLVTPSKIYCLGPE Sbjct: 332 HKLQSTCFEPLTFIKTRLHVLGKNNKNQLSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPE 391 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LETSNYIVKNFA HASDFLRVTFVEEDW KL PNA+SMSVEQGIFAKPYRTKIYHRILSI Sbjct: 392 LETSNYIVKNFAEHASDFLRVTFVEEDWGKLFPNAVSMSVEQGIFAKPYRTKIYHRILSI 451 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRS+SKCAAR Sbjct: 452 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAAR 511 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFSTS QTMEVQ QHVEILPDIEVT+DGVSYCFSDGIGKISQAFARQVAQKCGLN+T Sbjct: 512 MGQLFSTSVQTMEVQLQHVEILPDIEVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHT 571 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGGYKGVIAVDRNSFRKLSLR SMLKFES NRMLNITKWSDAMPCYLNREIVI Sbjct: 572 PSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVI 631 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LLSTLGVEDKA GKMLTTNEAALDVLES+GGG+VKKILMRMLLQGYAP+ Sbjct: 632 LLSTLGVEDKALEDLLDNHLRLLGKMLTTNEAALDVLESMGGGDVKKILMRMLLQGYAPN 691 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 EPYLSMMLQSHFENQ+SDLRSRCR+FIPKGR+LVGCLDETGIL YG+VY RITMTKAEL Sbjct: 692 REPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGEVYVRITMTKAEL 751 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 QNGQQNFFQ VDETTAVVRGKVVVTKNPCLHPGD K WV+CIIFPQ Sbjct: 752 QNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQN 811 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 GERPHPNECSGGDLDGDLYFI WDE+LIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV Sbjct: 812 GERPHPNECSGGDLDGDLYFICWDESLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 871 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMISDTLGAISTAHLVHADREPDKALN KCLQLATLHSMAVDFAKTGAAAEMPRFLKPR Sbjct: 872 DYMISDTLGAISTAHLVHADREPDKALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 931 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332 EFPDFMERWDKPMYISEGVLGKLYRGV+K +I RNSD L T IQDAYD DLLVEGYE Sbjct: 932 EFPDFMERWDKPMYISEGVLGKLYRGVIKSYIRRNSDDLSTDRAIQDAYDHDLLVEGYEA 991 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 FIE AK HKEMYLD M+SLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS Sbjct: 992 FIETAKTHKEMYLDSMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 1051 Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 AKSL KEVK WF+GCC EDDHQKL SAWYHVTY Sbjct: 1052 AKSLHKEVKGWFSGCCTEDDHQKLVSAWYHVTY 1084 >ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum] Length = 1119 Score = 1527 bits (3954), Expect = 0.0 Identities = 765/873 (87%), Positives = 792/873 (90%), Gaps = 3/873 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 EFLW+RTTDFS IKSIGCSSSLCWE EDG P N DVIDL LDKVG+IYS Sbjct: 212 EFLWIRTTDFSNIKSIGCSSSLCWETEDGWLSSDLFSSLPCCNQDVIDLDLDKVGDIYSG 271 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 SEFVPLV PSDLKLPYEILFQLNSLV TQKISLGA++ +LIEVLSKLELDTAMMILQKM Sbjct: 272 SEFVPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAINPNLIEVLSKLELDTAMMILQKM 331 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 HKLQS CF+P+ FIKTRLHVLGKN+KN+PSSSY+RLVNH+MMSVHRVLVTPSKIYCLGPE Sbjct: 332 HKLQSICFDPLLFIKTRLHVLGKNNKNRPSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPE 391 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LETSNYIVKNFASHASDFLRVTFVEEDW KL PNA+SMSVEQGIFAKPYRTKIYHRILSI Sbjct: 392 LETSNYIVKNFASHASDFLRVTFVEEDWGKLFPNAVSMSVEQGIFAKPYRTKIYHRILSI 451 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRS+SKCAAR Sbjct: 452 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAAR 511 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFSTS QTMEV+ QHVEILPDIEVT+DGVSYCFSDGIGKISQAFARQVAQKCGLN+T Sbjct: 512 MGQLFSTSVQTMEVKLQHVEILPDIEVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHT 571 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGGYKGVIAVDRNSFRKLSLR SMLKFES NRMLNITKWSDAMPCYLNREIVI Sbjct: 572 PSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVI 631 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LLSTLGVEDKA GKMLTTNEAALDVLES+GGGEVKKILMRMLLQGYAP+ Sbjct: 632 LLSTLGVEDKAFEDLLDNHLCLLGKMLTTNEAALDVLESMGGGEVKKILMRMLLQGYAPN 691 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 EPYLSMMLQSHFENQ+SDLRSRCR+FIPKGR+LVGCLDETGIL YGQVY RITMTKAEL Sbjct: 692 QEPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGQVYVRITMTKAEL 751 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 QNGQQNFFQ VDETTAVVRGKVVVTKNPCLHPGD K WV+CIIFPQK Sbjct: 752 QNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQK 811 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 GERPHPNECSGGDLDGDLYFI WDE+LIP QTVTPMDYTGRRPRIMDHEVTLEEIQRFFV Sbjct: 812 GERPHPNECSGGDLDGDLYFICWDESLIPCQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 871 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMISDTLGAISTAHLVHADREPDKALN KCLQLATLHSMAVDFAKTGAAAEMPRFLKPR Sbjct: 872 DYMISDTLGAISTAHLVHADREPDKALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 931 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLC---TIQDAYDLDLLVEGYED 2332 EFPDFMERWDKPMYISEGVLGKLYRGV+K +I RNSD L IQDAYD DLLVEGYE Sbjct: 932 EFPDFMERWDKPMYISEGVLGKLYRGVMKSYIRRNSDDLSADRAIQDAYDHDLLVEGYEA 991 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 F E AK HK MYLD M+SLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS Sbjct: 992 FTETAKTHKAMYLDSMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 1051 Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 AKSL KEVK WFT CC+EDDHQKLASAWYHVTY Sbjct: 1052 AKSLHKEVKGWFTSCCQEDDHQKLASAWYHVTY 1084 >gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana] Length = 1120 Score = 1523 bits (3944), Expect = 0.0 Identities = 764/873 (87%), Positives = 792/873 (90%), Gaps = 3/873 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 EFLWVRTTDFS +KSIGCSSS CWEIEDG PY NNDV+DL LD+VG+IYSA Sbjct: 213 EFLWVRTTDFSAMKSIGCSSSPCWEIEDGLLSSDLLSGLPYCNNDVMDLVLDEVGDIYSA 272 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 SE VPL S PSDLKLPYEILFQLNSL+HT KISLGAV TDLIEVLSKLELDTAMMILQKM Sbjct: 273 SELVPLASFPSDLKLPYEILFQLNSLIHTHKISLGAVKTDLIEVLSKLELDTAMMILQKM 332 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 HKLQSTCFEPV FIKTRLHVLGKNSKNQPSSSY+RLVN NMMSVHRVLVTPSK+YCLGPE Sbjct: 333 HKLQSTCFEPVPFIKTRLHVLGKNSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGPE 392 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LETSNYIVKNFA HASDFLRVTFVEEDW KLSPNAISMSVEQGIFAKPYRTKIYHRILSI Sbjct: 393 LETSNYIVKNFALHASDFLRVTFVEEDWGKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 452 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LR+G+VIG+KRF FLAFSASQLRSNSVWMFASNE+VKAEDIREWMGCFNKIRSVSKCAAR Sbjct: 453 LRDGLVIGSKRFLFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAAR 512 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFSTSFQTMEVQ HVEILPDIEVT+DGVSYCFSDGIGKISQAFA QVAQKCGL+YT Sbjct: 513 MGQLFSTSFQTMEVQSPHVEILPDIEVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYT 572 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGGYKGVIAVDRNSFRKLSLR SMLKFES NRMLNITKWSDAMPCYLNREIVI Sbjct: 573 PSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVI 632 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LLSTLGVEDK GKMLTTNEAALDVLESIGGG+VKKILMRML QGYAP+ Sbjct: 633 LLSTLGVEDKVFEDLLDNHLHLLGKMLTTNEAALDVLESIGGGDVKKILMRMLHQGYAPN 692 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 LEPYLSMMLQSHFENQLSDLRSRCR+FI KGRVLVGCLDETGILNYGQVYARITMTKAEL Sbjct: 693 LEPYLSMMLQSHFENQLSDLRSRCRIFIHKGRVLVGCLDETGILNYGQVYARITMTKAEL 752 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 Q+ QQ+FFQ VDETTAVVRG VVVTKNPCLHPGD KAWV+CIIFPQK Sbjct: 753 QSAQQSFFQKVDETTAVVRGNVVVTKNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQK 812 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 GERPHPNECSGGDLDGDLYFISWDENLIP QTVTPMDYTGRR RIMDHEVTL+EIQRFFV Sbjct: 813 GERPHPNECSGGDLDGDLYFISWDENLIPRQTVTPMDYTGRRTRIMDHEVTLQEIQRFFV 872 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR Sbjct: 873 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 932 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332 EFPDF+ERWDKPMYISEGVLGKLYR +V + NSD L + IQDAYD LL +GYE Sbjct: 933 EFPDFLERWDKPMYISEGVLGKLYRAIVNSSVRSNSDDLGSVRAIQDAYDHALLFDGYEA 992 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 FIE AKNHKE YLDRM+SLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS Sbjct: 993 FIETAKNHKETYLDRMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 1052 Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 AKSLQKEVK WFTGCCKED+H+KLASAWYHVTY Sbjct: 1053 AKSLQKEVKGWFTGCCKEDEHKKLASAWYHVTY 1085 >ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera] gi|297733815|emb|CBI15062.3| unnamed protein product [Vitis vinifera] Length = 1127 Score = 1214 bits (3140), Expect = 0.0 Identities = 604/873 (69%), Positives = 706/873 (80%), Gaps = 3/873 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 EFLW+RTTDFS IKS+G S+S CWEI++G PY D+ +L L++ S Sbjct: 211 EFLWLRTTDFSSIKSLGQSTSFCWEIKEGFPALDIFASFPYYK-DLTELTLEQGEGFCSD 269 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 S VPLV S KL YEILFQLNSLVH QKISL AVDTDLIE+LS L +DTA+MILQK+ Sbjct: 270 SGLVPLVKCESGPKLAYEILFQLNSLVHAQKISLAAVDTDLIEILSNLPVDTAIMILQKL 329 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 HK +ST ++P++FIK + H++ N KN P SS++RL N+N+MS HRVLVTPSKIYCLGPE Sbjct: 330 HKRKSTRYDPISFIKAQAHIINMNIKNLPPSSHSRLTNNNVMSCHRVLVTPSKIYCLGPE 389 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LE+SNY+VK++A++ASDF+RV+FVEEDWSKL NA+SMS+ + FA P+RT+IYHRILSI Sbjct: 390 LESSNYVVKHYAAYASDFVRVSFVEEDWSKLPSNALSMSIRKAFFADPFRTEIYHRILSI 449 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LREGIVIG KRF FLAFSASQLRSNSVWMFASN+ V+ +DIREWMGCF KIRSVSKCAAR Sbjct: 450 LREGIVIGAKRFQFLAFSASQLRSNSVWMFASNDKVRVDDIREWMGCFKKIRSVSKCAAR 509 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S QT+ V Q VE++PDIEVT+DG YCFSDGIGKIS +FA+QVAQKCGL+ T Sbjct: 510 MGQLFSSSVQTLPVPVQDVEVIPDIEVTSDGFGYCFSDGIGKISLSFAKQVAQKCGLHQT 569 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGGYKGVIAVDRNSFRKLSLR SMLKFES NRMLN+TKWS++ PCYLNREIV Sbjct: 570 PSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFESQNRMLNVTKWSESTPCYLNREIVS 629 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LLSTLGVED+ KMLT +AALDVLES+GG + K IL +MLLQGY P+ Sbjct: 630 LLSTLGVEDENFEALLNEQMHLLDKMLTNRQAALDVLESMGGIDNKNILAKMLLQGYEPN 689 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 +EPYLSMMLQ++ E+QLSD+R+RCR+F+PK RVL+GCLDETGILNYGQVY R+TMTKAE Sbjct: 690 VEPYLSMMLQAYRESQLSDIRTRCRIFVPKARVLIGCLDETGILNYGQVYVRVTMTKAEH 749 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 + Q+FFQ VD+TT+VV GKV+VTKNPCLHPGD K V+CI+FPQK Sbjct: 750 KCRNQSFFQKVDDTTSVVIGKVIVTKNPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQK 809 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 GERPHPNECSGGDLDGD +FI WDE LIP QT PMDYT RRPRIMDH+VTLEEIQ+FFV Sbjct: 810 GERPHPNECSGGDLDGDQFFICWDEGLIPSQTEAPMDYTSRRPRIMDHDVTLEEIQKFFV 869 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMI+DTLG ISTAHLVHADREP+KA + KCL+LATLHSMAVDFAKTGA AEMPR LKP+ Sbjct: 870 DYMINDTLGVISTAHLVHADREPEKARSKKCLELATLHSMAVDFAKTGAPAEMPRVLKPK 929 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLC--TIQD-AYDLDLLVEGYED 2332 EFPDFMER DKPMYIS G LGKLYR + ++ S + TI AYD DL V+G+E Sbjct: 930 EFPDFMERVDKPMYISNGALGKLYRATIASRVNEKSSFVWSGTIPGAAYDHDLEVDGFET 989 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 F+E AK HKEMY ++M++L+N+YGAE E E+LTGNLR K +YLQRDNRR+ E+KDRIL+S Sbjct: 990 FLEIAKLHKEMYAEKMATLMNFYGAESEDEMLTGNLRNKLMYLQRDNRRFTEMKDRILIS 1049 Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 KSLQKE K W G CK HQK+ASAWYHVTY Sbjct: 1050 VKSLQKEAKEWLYGSCKPHQHQKMASAWYHVTY 1082 >ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis] gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase, putative [Ricinus communis] Length = 983 Score = 1209 bits (3127), Expect = 0.0 Identities = 598/873 (68%), Positives = 702/873 (80%), Gaps = 3/873 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 +F+WVRTTDFS +KS+G S+S CWEIE+G PY ++ L+ SA Sbjct: 60 DFIWVRTTDFSSVKSVGQSTSFCWEIEEGLEASDIFKSFPYYTEAREEVILEDGEEWGSA 119 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 SE VPLV SD KLPYEILFQLNSLVHTQKISL AVDT+LI L L +DTA MILQK+ Sbjct: 120 SEIVPLVKCGSDSKLPYEILFQLNSLVHTQKISLAAVDTNLITTLGSLTIDTATMILQKL 179 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 HKL TC++P+ FIK +LHV G+N K SS LVNHN+MS HR L+TPSKIYCLGPE Sbjct: 180 HKLAVTCYDPLAFIKKQLHVPGRNLKRPFFSSSKNLVNHNIMSCHRALITPSKIYCLGPE 239 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LE+SNY+VKNFAS+ASDF+RVTFVEEDWSKL NAISMS+++GIFAKP+RT IYHRILSI Sbjct: 240 LESSNYVVKNFASYASDFMRVTFVEEDWSKLPANAISMSIQRGIFAKPFRTGIYHRILSI 299 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LR+GIVIG K+F FLAFSASQLRSNSVWMFASN+ KAE+IREWMGCFNKI S+SKCAAR Sbjct: 300 LRDGIVIGAKKFEFLAFSASQLRSNSVWMFASNDKKKAEEIREWMGCFNKIHSISKCAAR 359 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S QT V PQ +EI+PDIEVT+DG++YCFSDGIGKIS +FARQVAQKCGLN T Sbjct: 360 MGQLFSSSKQTFIVSPQDMEIIPDIEVTSDGINYCFSDGIGKISLSFARQVAQKCGLNRT 419 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGGYKGVIAVDRNSFRKLSLR SM KFES NRMLN+TKWS++MPCYLNREI+ Sbjct: 420 PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMCKFESENRMLNVTKWSESMPCYLNREIIT 479 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LL+TLGV+D+ +MLT E+AL+VLE++ K IL++ML+QGY P+ Sbjct: 480 LLTTLGVKDEIFEGLQQQQLQLLNRMLTNRESALNVLENLAWANCKNILIKMLVQGYEPN 539 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 +EPYLSMMLQ++ EN L +LRSRCR+F+PKGR+L+GCLDET IL+YGQVY RITMTKAEL Sbjct: 540 VEPYLSMMLQAYHENLLVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAEL 599 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 Q+ Q F VDETTAVV GKV+VTKNPCLHPGD K V+CI+FPQK Sbjct: 600 QDADQASFHRVDETTAVVTGKVIVTKNPCLHPGDIRVLEAVYEVELEEKGLVDCILFPQK 659 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 GERPHPNECSGGDLDGD +FISWD+ LIP +T +PMDY GRRPR MDH+VTLEEIQ+FF+ Sbjct: 660 GERPHPNECSGGDLDGDQFFISWDKGLIPGETESPMDYQGRRPRKMDHDVTLEEIQKFFI 719 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMI+DTLGAISTAHLVHADREPDKA + KCLQLA LHSMAVDFAKTGA AEMP+ LKP+ Sbjct: 720 DYMINDTLGAISTAHLVHADREPDKARSSKCLQLAELHSMAVDFAKTGAPAEMPKALKPK 779 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332 EFPDFMER DK MYIS GVLGKLYRG + + S + T + YD DL V+G+E+ Sbjct: 780 EFPDFMERIDKKMYISGGVLGKLYRGTLDSTRQQRSKFVWTENIAEATYDHDLEVKGFEE 839 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 F+E A +HK+MY++++S L++YY A+KE EILTGNL+ K++YLQRDNRRY + KDRIL+S Sbjct: 840 FVEIAISHKDMYVEKLSGLMDYYEAKKEDEILTGNLQNKAMYLQRDNRRYGDTKDRILIS 899 Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 KSLQKE K WF CC+ + Q+LASAWYHVTY Sbjct: 900 VKSLQKEAKEWFESCCQAKEKQRLASAWYHVTY 932 >gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica] Length = 1118 Score = 1200 bits (3104), Expect = 0.0 Identities = 596/874 (68%), Positives = 703/874 (80%), Gaps = 4/874 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPY-ANNDVIDLYLDKVGNIYS 178 +FLWVRTTDFS +KSIG S+S CWEIE+ PY +NDV+DL LD S Sbjct: 211 DFLWVRTTDFSDMKSIGYSTSFCWEIEEEFSVSDVFECFPYYKDNDVVDLILDNGEKYCS 270 Query: 179 ASEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQK 358 SE VPLV SD KLPYEILFQLN+LVH+QKISL A D+DLIE LS L +DT ++L+K Sbjct: 271 PSETVPLVKCRSDSKLPYEILFQLNALVHSQKISLAATDSDLIEFLSGLSVDTTNVLLEK 330 Query: 359 MHKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGP 538 +HK ++TC++P++F+K +LHVL +N K++PS Y RL+ HN+MS HRVL+TPSKI CLGP Sbjct: 331 LHKRKTTCYDPLSFLKMQLHVLERNHKSRPSP-YKRLMEHNVMSCHRVLITPSKICCLGP 389 Query: 539 ELETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILS 718 ELE SNY+VKNFA++ASDF+RVTFV+EDWSKL NAIS S++QGIFAKP+RT IYHR+LS Sbjct: 390 ELEKSNYVVKNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHRMLS 449 Query: 719 ILREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAA 898 ILR+GIVIG KRF FLAFSASQLRS+SVWMF+SN+ VKAEDIREWMGCF+KIRS+SKCAA Sbjct: 450 ILRDGIVIGEKRFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAA 509 Query: 899 RMGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNY 1078 RMGQLFS+S QT+ V Q VEI+PD+E ++DGV+YCFSDGIGKIS +FAR+VAQKCGL+ Sbjct: 510 RMGQLFSSSTQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQ 569 Query: 1079 TPSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIV 1258 TPSAFQIRYGGYKGVIAVD SFRKLSLR SMLKFES NRMLN+TKWSDAMPCYLNREI+ Sbjct: 570 TPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSMLKFESKNRMLNVTKWSDAMPCYLNREII 629 Query: 1259 ILLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAP 1438 LLSTLGV+D+ GKM T AAL+V E + G + K L++MLL GY P Sbjct: 630 SLLSTLGVKDETFEALQEEQLRLLGKMRTERGAALNVFERLNGADSKNTLVKMLLHGYEP 689 Query: 1439 SLEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAE 1618 + EPYLSMMLQ+++EN LSDL+SRCR+F+PKGRVLVGCLDETG L+YGQVY RITMTKAE Sbjct: 690 NAEPYLSMMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAE 749 Query: 1619 LQNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQ 1798 + G Q+FFQ VDETT VV GKVVVTKNPCLHPGD K V+C+IFPQ Sbjct: 750 QEMGDQSFFQKVDETTLVVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEEKNMVDCLIFPQ 809 Query: 1799 KGERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFF 1978 KGERPHPNECSGGDLDGDL+FISWD++L+P TV PMDY+ RRPRIMDH VTLEEIQ+FF Sbjct: 810 KGERPHPNECSGGDLDGDLFFISWDKDLVPSHTVPPMDYSARRPRIMDHTVTLEEIQKFF 869 Query: 1979 VDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKP 2158 VDYMI+D LGAISTAHLVHAD EPDKALNPKCLQLA LHSMAVDFAKTGA AEM R LKP Sbjct: 870 VDYMINDNLGAISTAHLVHADHEPDKALNPKCLQLADLHSMAVDFAKTGAPAEMSRTLKP 929 Query: 2159 REFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCTIQ---DAYDLDLLVEGYE 2329 +EFPDFMER DKPMYIS G LGKLYR VV + ++++ + Q AYD DL V+G E Sbjct: 930 KEFPDFMERVDKPMYISNGALGKLYRAVVGSVLQEKTNLVWSEQIAEAAYDQDLEVDGLE 989 Query: 2330 DFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILV 2509 +E AK H++MY+++M +++NYYGA E EILTGNLR ++ YLQRDNRRY ++KDRI + Sbjct: 990 SVLEVAKGHRDMYIEKMRTMMNYYGAVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISL 1049 Query: 2510 SAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 S K+LQKE K F C +HQ++ASAWYHVTY Sbjct: 1050 SLKNLQKEAKGLFESSCPVSEHQRMASAWYHVTY 1083 >ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis] Length = 1131 Score = 1196 bits (3095), Expect = 0.0 Identities = 581/873 (66%), Positives = 705/873 (80%), Gaps = 3/873 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 +F WVRTTDFS KSIGCS+S WEI++G P+ D DL L++ + Sbjct: 226 DFFWVRTTDFSVTKSIGCSTSFFWEIKNGLLASDISNIFPFYKEDKTDLILEEGEEFCTT 285 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 SE VPLV L +E+LFQLNSLVH QK+SL A D +LI++L+ L ++TA+M+LQK+ Sbjct: 286 SEIVPLVKCRPGFNLSHEVLFQLNSLVHNQKVSLVAADAELIQILNGLSMETALMVLQKL 345 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 HKL+S C++PV+F+KT+LHVLG+N K+ P SS+ RL++HN+MS +R LVTP KIYCLGPE Sbjct: 346 HKLKSICYDPVSFVKTQLHVLGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGPE 405 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LETSNY+VKNFA +ASDF+RVTFVEEDWSKL NA+S S+++GIFAKPYRTKIY RIL+I Sbjct: 406 LETSNYVVKNFAKYASDFMRVTFVEEDWSKLPANALSTSIQRGIFAKPYRTKIYSRILTI 465 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 L++GIVIG K + FLAFSASQLR+NSVWMFASN+ V AED+REWMGCFNKI SVSKCAAR Sbjct: 466 LQDGIVIGDKHYEFLAFSASQLRNNSVWMFASNDEVSAEDVREWMGCFNKIHSVSKCAAR 525 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S QT+ V Q VE++PD+EVT+DG +YCFSDGIGKIS +FARQVAQKCGL++T Sbjct: 526 MGQLFSSSKQTLVVPVQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHT 585 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFES NRMLN+TKWS++MPC+LNREI+ Sbjct: 586 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIIS 645 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LLSTLGV+D GKML EAALDVL+ + G + K IL++MLLQGY P+ Sbjct: 646 LLSTLGVKDDVFEAMQQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEPN 705 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 +EPYLSMML SH ENQLSDL+SRCR+++PKGR+L+GC DETGILNYGQV+ R+TMT+ EL Sbjct: 706 VEPYLSMMLLSHHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREEL 765 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 ++ Q+FF VD+ T++V+GKV+VTKNPCLHPGD K +V+CIIFPQK Sbjct: 766 ESKDQSFFHRVDDKTSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQK 825 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 GERPHPNECSGGDLDGD++FISWD +LIP +T PMDYTGRR RIMDH+VTLEEI +FFV Sbjct: 826 GERPHPNECSGGDLDGDIFFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFV 885 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMI+DTLGAISTAHLVHADR+PDKA + KCL LATLHSMAVDFAKTGA AEMP LKP+ Sbjct: 886 DYMINDTLGAISTAHLVHADRDPDKARSSKCLHLATLHSMAVDFAKTGAPAEMPLALKPK 945 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332 EFPDFMER DKP YIS GVLGKLYR + + S+ + + + +YD DL V+G+E Sbjct: 946 EFPDFMEREDKPRYISFGVLGKLYRATLDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEA 1005 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 F+ A++HKEMY + M++L+NYYGA E EILTGNLR ++ YLQRDNRRY ++KDRIL+S Sbjct: 1006 FLGVAESHKEMYEEEMNALMNYYGASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLS 1065 Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 AK+LQ E K WF CKE++H +LASAWYHVTY Sbjct: 1066 AKNLQNEAKEWFGSSCKENEHPQLASAWYHVTY 1098 >gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] Length = 1115 Score = 1187 bits (3072), Expect = 0.0 Identities = 576/873 (65%), Positives = 697/873 (79%), Gaps = 3/873 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 EF WVRTTDF KSIG S+SLCW+ ++ PY + DL L+ S Sbjct: 209 EFHWVRTTDFLESKSIGHSTSLCWDAKEDFLSSDTFRSFPYYREGMKDLILEDSDEFCSV 268 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 SE VPL+ P+ L YEILFQLNSLVH QKIS + D DLIE L +DTA ++QK+ Sbjct: 269 SETVPLIKCPAGSNLSYEILFQLNSLVHMQKISFASADADLIEYFGSLNIDTANAVIQKL 328 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 HKL+STC++P++ KT H+L KN+KN PSS+ RL +++MS HR L+TPSKIYC+GPE Sbjct: 329 HKLKSTCYDPLSLAKTYAHILEKNTKN-PSSAIKRLTENSLMSCHRALITPSKIYCMGPE 387 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LETSNY+VKNFA++ASDFLRVTFVEEDW KL P+ +S S+EQGIFAKPYRT IY RILSI Sbjct: 388 LETSNYVVKNFAAYASDFLRVTFVEEDWGKLHPHVVSTSIEQGIFAKPYRTGIYDRILSI 447 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LR GI+IG KR+ FLAFSASQLRS++VWMFASN+ VKAEDIREWMGCFNKIRSVSKCAAR Sbjct: 448 LRNGILIGAKRYEFLAFSASQLRSSAVWMFASNDNVKAEDIREWMGCFNKIRSVSKCAAR 507 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S QT+ V Q +EI+PD+EVT DG+ YCFSDGIGKIS +FARQVAQKCGL T Sbjct: 508 MGQLFSSSRQTLIVPTQDLEIIPDVEVTTDGIDYCFSDGIGKISSSFARQVAQKCGLKET 567 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGGYKGVIAV+R+SFRKLSLR SMLKFES+NRMLN+TKWS +MPCYLNREIV Sbjct: 568 PSAFQIRYGGYKGVIAVNRSSFRKLSLRSSMLKFESSNRMLNVTKWSGSMPCYLNREIVS 627 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LLS+LGV+D++ GKM T EAAL+VLE++ G + IL++MLLQGY P+ Sbjct: 628 LLSSLGVKDESFLALLREQLLLLGKMRTNREAALNVLENLNGSDSSNILVKMLLQGYEPN 687 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 EPYLSMM+QS++ENQLSDL++RCR+F+PKG+VL+GCLDETGIL YGQVY R+TM KAEL Sbjct: 688 AEPYLSMMIQSYYENQLSDLKTRCRIFVPKGKVLIGCLDETGILEYGQVYVRLTMKKAEL 747 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 + G Q+FF+ VD+ T++V GKVVVTKNPCLHPGD + V+C++FPQK Sbjct: 748 EAGNQSFFRKVDDETSIVVGKVVVTKNPCLHPGDVRVLEAVYDAKLEEEGLVDCLVFPQK 807 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 GERPHPNECSGGDLDGDL+FISWD NLIP +T PMDY GRRPRIMDH+VTLEEIQ+FFV Sbjct: 808 GERPHPNECSGGDLDGDLFFISWDTNLIPPRTTAPMDYIGRRPRIMDHDVTLEEIQKFFV 867 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMI+DTLG ISTAHL+HADREP+KA + CLQLATLHSMAVDFAKTGA AEMPR L+PR Sbjct: 868 DYMINDTLGGISTAHLIHADREPEKAFSENCLQLATLHSMAVDFAKTGAPAEMPRALRPR 927 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLC---TIQDAYDLDLLVEGYED 2332 ++PDFMER D+PMY+S G LGKLYR V+ +S+++ T + AYD DL V G+E+ Sbjct: 928 DYPDFMERLDRPMYVSNGALGKLYRATVESESQGSSNLVWSEKTAEAAYDRDLEVNGFEE 987 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 FI A++H++MY+D+M+ ++NYY E E E+LTGNLR+++ YLQRDNRRYFE+KDRIL++ Sbjct: 988 FIALAESHRDMYIDKMNGIMNYYELESEDEVLTGNLRKRAAYLQRDNRRYFEVKDRILLA 1047 Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 KSLQ+E K WF G C+ + QK+ASAWYHVTY Sbjct: 1048 VKSLQREAKGWFEGSCEAMEQQKMASAWYHVTY 1080 >ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca subsp. vesca] Length = 1136 Score = 1173 bits (3035), Expect = 0.0 Identities = 574/873 (65%), Positives = 691/873 (79%), Gaps = 3/873 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 ++LWVR TDFS +KSIG S++ CWEI++ P DV+DL + G+ Sbjct: 214 DYLWVRCTDFSEMKSIGHSTAFCWEIQEDVAAAGVFTTFPSFRKDVVDLMFEDGGDCLLV 273 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 SE VPLV +D+K PYEILFQLN LVH QKISL AV +DLIE L +DTA ++L+K+ Sbjct: 274 SETVPLVKCEADMKFPYEILFQLNVLVHAQKISLAAVGSDLIEFFGGLSMDTANVLLEKL 333 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 KL++TC++P++F+K +L +L +NSK + S + RL+ HN+MS HRVL+TPSKIYCLGPE Sbjct: 334 QKLKTTCYDPLSFVKVQLQLLERNSKKR-LSPHQRLMEHNVMSCHRVLITPSKIYCLGPE 392 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LE SNY+VKNFA +ASDF+RVTFVEEDW KL NA+S S+EQG FAKP+RT IY RILSI Sbjct: 393 LEKSNYVVKNFAQYASDFMRVTFVEEDWGKLPVNALSTSIEQGFFAKPFRTGIYQRILSI 452 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LR+GIVIG KRF FLAFSASQLRSNSVWMFASN+ VKAEDIR+WMGCFNKIRSVSKCAAR Sbjct: 453 LRDGIVIGDKRFEFLAFSASQLRSNSVWMFASNDSVKAEDIRDWMGCFNKIRSVSKCAAR 512 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S QT+ V + VE++PDIE T DGVSYCFSDGIGKIS +FARQVAQKCGLN T Sbjct: 513 MGQLFSSSTQTLTVPQKDVELIPDIETTTDGVSYCFSDGIGKISLSFARQVAQKCGLNDT 572 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGGYKGVIAVDRNSFRKLSLR SMLKF+S NRMLN+TKWS +MPC+LNREI+ Sbjct: 573 PSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFDSDNRMLNVTKWSSSMPCFLNREIIT 632 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 L+STLGVED+A G+M AL LE + G + IL+++LLQGY P+ Sbjct: 633 LMSTLGVEDEAFEALQQEQLDLLGRMRKDRNVALSSLEKLSGADSNNILVKLLLQGYEPN 692 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 LEPYLSMMLQ+H+E+ L+DL+SRCR+++PKGR+LVGCLDETG LNYGQVY RITMTKAE Sbjct: 693 LEPYLSMMLQAHYEHHLADLKSRCRMYVPKGRILVGCLDETGTLNYGQVYLRITMTKAEQ 752 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 + G Q+FFQ VDE T +V GKVVVTKNPCLHPGD K V+CI+FPQK Sbjct: 753 EMGHQSFFQRVDEATCIVTGKVVVTKNPCLHPGDIRVLEAVYDVGLEEKNMVDCILFPQK 812 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 GERPHPNECSGGDLDGDL+FISWD++LIP TV PMDY+ RRPR MDH+VTLEEIQ+FFV Sbjct: 813 GERPHPNECSGGDLDGDLFFISWDKSLIPPTTVPPMDYSARRPRNMDHDVTLEEIQKFFV 872 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMI+D LGAISTAHLVH+D EP+KA++ KCL+LA LHSMAVDFAKTGA AE+ LKP+ Sbjct: 873 DYMINDNLGAISTAHLVHSDHEPEKAMSKKCLELADLHSMAVDFAKTGAPAELSWILKPK 932 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCTIQ---DAYDLDLLVEGYED 2332 EFPDFMER ++PMYIS G LGKLYR + + + V+ + Q +AYD +L V+G+E Sbjct: 933 EFPDFMERVERPMYISNGALGKLYRAIRSSVVQEQTIVVWSQQRAEEAYDRELEVQGFES 992 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 F+E A++H++ Y+++M SL+NYY A E EILTGNLR ++ YLQRDNRRYF+LKDRIL+S Sbjct: 993 FLEMAESHRDKYIEKMRSLMNYYEATTEDEILTGNLRNRAAYLQRDNRRYFDLKDRILLS 1052 Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 K+LQKE K WF CK + Q+LASAWYHVTY Sbjct: 1053 LKTLQKEAKGWFESSCKVSEQQRLASAWYHVTY 1085 >gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao] gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao] Length = 1149 Score = 1169 bits (3024), Expect = 0.0 Identities = 581/873 (66%), Positives = 690/873 (79%), Gaps = 3/873 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 +FLWVRTTDFS K++G S++ WEI D+ L L G SA Sbjct: 218 DFLWVRTTDFSRTKAVGQSTAFYWEINAELLTLDLFSCFSCYREDMKGLTLKGGGEFSSA 277 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 E VPLV PSD KL YEILFQLNSLVHTQKIS+ +VDTDLI++L L ++TA+MILQK Sbjct: 278 PEIVPLVKGPSDSKLAYEILFQLNSLVHTQKISIASVDTDLIDILRVLAVETAVMILQKF 337 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 HKL STC+ PV+F+K L V +N +++P SS+ RL++HN+MS HR LVTPSKIYCLGPE Sbjct: 338 HKLLSTCYNPVSFVKENLPVSERNFQSRPLSSFKRLIDHNVMSCHRALVTPSKIYCLGPE 397 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LETSNY+VKNFA +ASDF+RV+FVEEDW KLS NAIS SV+ GIF+KP+RTKIYHRILS+ Sbjct: 398 LETSNYVVKNFAEYASDFMRVSFVEEDWGKLSANAISTSVQLGIFSKPFRTKIYHRILSV 457 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 L+ GIVIG KRF FLAFSASQLRSNSVWMFASN+ V AED+REWMGCF KIRSVSKCAAR Sbjct: 458 LQHGIVIGDKRFEFLAFSASQLRSNSVWMFASNDKVTAEDVREWMGCFKKIRSVSKCAAR 517 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S T+ V Q V+I+PDIEVT+DG++YCFSDGIGKIS FAR+VAQKCGLN T Sbjct: 518 MGQLFSSSLPTLVVPVQDVKIIPDIEVTSDGINYCFSDGIGKISLPFAREVAQKCGLNDT 577 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGGYKGV+AVDRNSFRK+SLR SM KFES RMLN+TKWS++MPC+LNREIV Sbjct: 578 PSAFQIRYGGYKGVVAVDRNSFRKMSLRGSMHKFESKIRMLNVTKWSESMPCFLNREIVT 637 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LLSTLG++D+A G+MLT EAALDVL+S+ G + + IL++MLLQGY P+ Sbjct: 638 LLSTLGIKDEAFETLQQEQLHLLGQMLTNREAALDVLQSLCGADSQNILVKMLLQGYEPN 697 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 +EPYLSMML ++ + LSDL+ RCR+++PKG+VLVGCLDET LNYGQVY R+++ KAEL Sbjct: 698 VEPYLSMMLLANHVSLLSDLKCRCRIYVPKGQVLVGCLDETATLNYGQVYVRLSIKKAEL 757 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 ++ QNFF VDE TA+V GKVVVTKNPCLHPGD K V+C++FPQK Sbjct: 758 EHADQNFFHKVDEKTAIVIGKVVVTKNPCLHPGDVRVLEAVYEAELEDKGLVDCLVFPQK 817 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 GERPHPNECSGGDLDGD +FISWD++LIP QT PMDYTG RPRIMDHEVTLEEIQ+FFV Sbjct: 818 GERPHPNECSGGDLDGDQFFISWDKDLIPCQTDAPMDYTGSRPRIMDHEVTLEEIQKFFV 877 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMI+DTLGAISTAHLVHADREPDKA + KCL+LATLHSMAVDFAKTGA AEMPR LKPR Sbjct: 878 DYMINDTLGAISTAHLVHADREPDKARSEKCLELATLHSMAVDFAKTGAPAEMPRSLKPR 937 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCTIQDA---YDLDLLVEGYED 2332 EFPDFM+R DKPMY S GVLGKLYR + + S + + + A YD DL V G+E Sbjct: 938 EFPDFMQRVDKPMYASLGVLGKLYRATINSTVQERSKFVWSKKMAEALYDHDLEVNGFEA 997 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 F+ A+ HK+MY ++MS L+NYY E E EILTGN+R K+ +LQRDNRRY ++KDRIL+S Sbjct: 998 FLSTAQTHKDMYEEKMSFLMNYYEVESEDEILTGNMRNKATFLQRDNRRYGDMKDRILLS 1057 Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 K+LQ+E + F CK +HQ+LASAWYHVTY Sbjct: 1058 MKNLQREARERFENSCKVGEHQRLASAWYHVTY 1090 >ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa] gi|222868578|gb|EEF05709.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa] Length = 1110 Score = 1149 bits (2971), Expect = 0.0 Identities = 577/873 (66%), Positives = 684/873 (78%), Gaps = 3/873 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 +FLWVRTTD S IKSIG S+S CWEI +G PY D+ L L+ SA Sbjct: 213 DFLWVRTTDISAIKSIGQSTSFCWEIGEGLEASDTFRNFPYYQEDMNRLDLEDGEEFCSA 272 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 SE VPL+ SD KL YE+LFQLNSLVHTQKISL AVD+DLI++L L ++TA++ILQK+ Sbjct: 273 SETVPLIRCGSD-KLAYEVLFQLNSLVHTQKISLAAVDSDLIKILRNLTVNTAIIILQKL 331 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 HKL+ TC++P++F+K L + S + P S L +N+MS HR L+TPSKI+CLGPE Sbjct: 332 HKLKMTCYDPLSFVKQSL----RESLSSPPKS---LTENNIMSCHRALITPSKIFCLGPE 384 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 ETSNY+VK+FA +ASDF+RVTFVEEDWSKL NAIS S+++GIFAKP+RT IYHRILSI Sbjct: 385 YETSNYVVKHFAQYASDFIRVTFVEEDWSKLPANAISTSIQRGIFAKPFRTGIYHRILSI 444 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LR+G VIG KRF FLAFSASQLRSNSVWMFASN VKAEDIR+WMGCF+KIRSVSKCAAR Sbjct: 445 LRDGFVIGAKRFEFLAFSASQLRSNSVWMFASNNGVKAEDIRKWMGCFDKIRSVSKCAAR 504 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S QT V Q VEI+PDIEVT DG+ YCFSDGIGKIS +FA+QVA KCGL++T Sbjct: 505 MGQLFSSSLQTFVVPVQDVEIIPDIEVTTDGIDYCFSDGIGKISLSFAKQVAHKCGLSHT 564 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGGYKGV+AVDRNSFRKLSLR SMLKF+S NRMLN+TKWS++MPCYLNREI+ Sbjct: 565 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFDSENRMLNVTKWSESMPCYLNREIIS 624 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LLSTLGV D+ KMLT E+ALDVLE++ + K IL++MLLQGY P+ Sbjct: 625 LLSTLGVADEIFQALQQKQLYRLRKMLTNKESALDVLENLAWADSKNILVQMLLQGYEPN 684 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 +EPYLSMMLQ++ EN L +LRSRCR+F+PKGR+L+GCLDE+GIL+YGQVY RITMTKAEL Sbjct: 685 VEPYLSMMLQAYHENSLMELRSRCRIFVPKGRILIGCLDESGILDYGQVYVRITMTKAEL 744 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 Q Q+FF+ VDE+T+ + G+V VTKNPCLHPGD K V+CIIFPQ Sbjct: 745 QCCDQSFFRKVDESTSTIIGEVAVTKNPCLHPGDIRVLEAVYDVELEEKGLVDCIIFPQN 804 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 G RPHPNECSGGDLDGD +FISWDE L+P T PMDY G R RIMDH VTLEEIQRFFV Sbjct: 805 GGRPHPNECSGGDLDGDQFFISWDEGLLPCHTEAPMDYVGGRQRIMDHNVTLEEIQRFFV 864 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMI+DTLGAISTAHLVHAD EPDKA + KCLQLATLHSMAVDFAKTGA AEMP +LKPR Sbjct: 865 DYMINDTLGAISTAHLVHADCEPDKARSEKCLQLATLHSMAVDFAKTGAPAEMPLYLKPR 924 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332 EFPDFMER +K MYIS+GVLGKLYR + S+ + + + YD DL V+G+ED Sbjct: 925 EFPDFMERAEKQMYISDGVLGKLYRDIHDSTRQERSNFMWSKKIAEATYDQDLEVKGFED 984 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 F+ A +KE Y+++MS+L++YYGA+ E EILTGNLR + YLQRDNR+Y ++KDRILVS Sbjct: 985 FLGIASIYKEKYMEKMSTLMDYYGAKTEDEILTGNLRHRPTYLQRDNRKYGDVKDRILVS 1044 Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 K+L+KE K WF C +HQ +ASAWYHVTY Sbjct: 1045 LKNLKKEAKEWFESSCNPTEHQCMASAWYHVTY 1077 >ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus] gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase 2 [Cucumis sativus] Length = 1117 Score = 1144 bits (2960), Expect = 0.0 Identities = 560/873 (64%), Positives = 689/873 (78%), Gaps = 3/873 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 ++LWVRTT+FS ++S+G S+S CWE+E+ P+ D+ L+ S Sbjct: 211 DYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQASDIFSCFPFYKETQKDIVLEDGEEFCST 270 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 SE VPL+ S L YE+ +QLNSLVH QKISL A + DLI+ L L++DTA+ +LQ++ Sbjct: 271 SEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKISLSAANQDLIDFLCTLDIDTALNVLQRL 330 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 H+L+ C++P++F+KT+LHV +N K+ P SS RL N N+M+ +RVLVTPS+IYCLGPE Sbjct: 331 HQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSSQKRLSN-NVMNCYRVLVTPSRIYCLGPE 389 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LETSNY+VKNF+S+ASDF+RVTFVEEDWSKL A++ S+++GI +KPYRT+IYHRI+++ Sbjct: 390 LETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTV 449 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LR+GIVIG KRF FLAFSASQLRSNSVWMFAS++ +KAE+IR+WMGCF KIRS+SKCAAR Sbjct: 450 LRDGIVIGAKRFEFLAFSASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAAR 509 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S QT+ V + VEI+PDIEV DG+ YCFSDGIGKIS +FARQVA KCG+N+ Sbjct: 510 MGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHI 569 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGGYKGVIAVDRNSFRKLSLR SMLKFES N+MLN+TK D+MPCYLNREI Sbjct: 570 PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIAT 629 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LLSTLGV+D++ +MLT + AL+VLE+ G + IL++ML GY P+ Sbjct: 630 LLSTLGVKDESFEALQQEQLHLLKRMLTDKDVALNVLENFHGADSNNILVQMLNHGYEPN 689 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 +EPYLSMMLQ+H+ N SDLRSRCR+F+PKGR+L+GCLDETGILNYGQVYA IT+TK+EL Sbjct: 690 IEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSEL 749 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 Q+ QN+F +DET +++ GKVVVTKNPCLHPGD K V+C+IFPQK Sbjct: 750 QSRNQNYFHTIDETKSILLGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQK 809 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 G RPH NECSGGDLDGDLYFISWDENLIP +T PMDYTGRRPRIMDH+V LEEIQ+FFV Sbjct: 810 GARPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFV 869 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMI+DTLGAISTAHLVHADREP KAL+ KCL+LA LHSMAVDFAKTGA AEMPR LKPR Sbjct: 870 DYMINDTLGAISTAHLVHADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPR 929 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCTIQDA---YDLDLLVEGYED 2332 EFPDFMER+DKPMYIS VLGKLYR VK S ++ + + A YD DL V+G+E Sbjct: 930 EFPDFMERFDKPMYISSNVLGKLYRAAVKSIEQERSRLVWSEEAARAIYDYDLEVDGFEA 989 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 F+E A+ +KEMY+++MS L+NYYGAE E EIL G+LR ++ YLQRDNR+Y ++KDRIL+S Sbjct: 990 FLEIAETYKEMYIEKMSILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLS 1049 Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 K+L+KEVK WF C + + +ASAWYHVTY Sbjct: 1050 VKNLRKEVKEWFENSCDPLNRRMMASAWYHVTY 1082 >ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum] Length = 1122 Score = 1138 bits (2944), Expect = 0.0 Identities = 564/875 (64%), Positives = 694/875 (79%), Gaps = 6/875 (0%) Frame = +2 Query: 5 FLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSAS 184 F+WVRTTDFS +KSIG S+S CWEIE+ P ++ DL L+ S + Sbjct: 214 FMWVRTTDFSRLKSIGHSTSFCWEIEEESSDSDVFRSFPLYRENLKDLSLEDGEEFCSPT 273 Query: 185 EFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKMH 364 E VPLV D KLPYE LFQLNSLVHTQKISL +VD +LI++++ L+ +T +I QK+H Sbjct: 274 ETVPLVKCRLDTKLPYEALFQLNSLVHTQKISLASVDDELIDLIASLDDETKAVIFQKLH 333 Query: 365 KLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPEL 544 K+ STC+EP+ F+KT+LHVL K+ SS RL ++N+MS HR L+TPSKIYCLGPEL Sbjct: 334 KMSSTCYEPLRFVKTQLHVLSIKKKSLRPSSQKRLADNNIMSCHRALITPSKIYCLGPEL 393 Query: 545 ETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSIL 724 ETSN++VK+FAS+ASDF+R+TFVEEDWSKL NA+S S+++GIFAKP+RT IY R+L+IL Sbjct: 394 ETSNHVVKHFASYASDFMRITFVEEDWSKLPINAVSTSLQKGIFAKPFRTDIYKRVLTIL 453 Query: 725 REGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAARM 904 R+GIVIG+KRF FLAFSASQLRSNSVW+FASN+ VKAEDIREWMG F IRSVSKCAARM Sbjct: 454 RDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDKVKAEDIREWMGSFTNIRSVSKCAARM 513 Query: 905 GQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT- 1081 GQLFS+S QT E+ PQ V+I+PDIE+T+DG++YCFSDGIGKIS +FA+Q+AQK L+ + Sbjct: 514 GQLFSSSKQTFEMAPQDVDIIPDIELTSDGINYCFSDGIGKISLSFAKQLAQKLKLDQSR 573 Query: 1082 -PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIV 1258 PSAFQIRYGGYKGVIAVDR+SFRKLS+R SMLKFES NRML +TKWS++MPC+LNREI+ Sbjct: 574 IPSAFQIRYGGYKGVIAVDRHSFRKLSMRNSMLKFESKNRMLCVTKWSESMPCFLNREII 633 Query: 1259 ILLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAP 1438 LLSTLGV+D+A GKMLT EAALDVLES+ G + + IL++ML Y P Sbjct: 634 SLLSTLGVKDEALLAMQEEQLQLLGKMLTDREAALDVLESLSGADSRSILVKMLNGFYEP 693 Query: 1439 SLEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAE 1618 + EPYLSMML++H+ QLSDL+SRCR+F+PKGRVL+GCLDETGILNYGQV+ RIT+TK + Sbjct: 694 NSEPYLSMMLKAHYAYQLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVFVRITVTKTK 753 Query: 1619 LQNGQQNFFQM-VDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFP 1795 + G +N + D++T ++ GKVVVTKNPCLHPGD K +C++FP Sbjct: 754 EKIGDENLQNVDGDDSTRIIVGKVVVTKNPCLHPGDIRVLDAIYNEELEEKGLRDCLVFP 813 Query: 1796 QKGERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRF 1975 QKG RPHPNECSGGDLDGDL+FISWD++LIP QT PMDYTGRRPRIMDH+VTLEEI +F Sbjct: 814 QKGPRPHPNECSGGDLDGDLFFISWDKDLIPPQTDNPMDYTGRRPRIMDHKVTLEEIHQF 873 Query: 1976 FVDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLK 2155 FVDYMI+DTLGAISTAHLVHADREP+KA + KCL+LA LHSMAVDFAKTGA AEMPR LK Sbjct: 874 FVDYMINDTLGAISTAHLVHADREPEKARSRKCLELAELHSMAVDFAKTGAPAEMPRALK 933 Query: 2156 PREFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGY 2326 PREFPDFMER+DKPMYIS GVLGKLYR +V+ S+++ + ++AYD L V G+ Sbjct: 934 PREFPDFMERFDKPMYISNGVLGKLYRALVESTTQVRSNIVLSEKFAEEAYDHQLEVNGF 993 Query: 2327 EDFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRIL 2506 E F+E A +HKEMY +MSSL+++Y AE E E+LTGNL+ ++ YLQRDNRRY ++KDRIL Sbjct: 994 EAFLETASSHKEMYAQKMSSLMSFYDAETEDEMLTGNLQNRASYLQRDNRRYGDMKDRIL 1053 Query: 2507 VSAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 +S K LQ+E K WF C+ ++Q +ASAWYHVTY Sbjct: 1054 ISVKDLQREAKEWFESDCQPHEYQLMASAWYHVTY 1088 >gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] Length = 1147 Score = 1138 bits (2943), Expect = 0.0 Identities = 578/874 (66%), Positives = 676/874 (77%), Gaps = 4/874 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 +FLWVRTTDFS IKSIG S+S WE G P D+ L+ G S Sbjct: 213 DFLWVRTTDFSRIKSIGQSTSFYWEFNAGFSISDMSTYLPCYREDIQSPSLEARGEFSSP 272 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 SE VPLV PSD KL YEILFQLN+LVHTQKIS+ AVDTDLI +LS L ++TA+MILQK+ Sbjct: 273 SEIVPLVKFPSDSKLAYEILFQLNALVHTQKISIAAVDTDLIGILSVLPVETAVMILQKL 332 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 LQS C+ PV+F+K +L GKN + P S RL NHN+MS HR L+TP+KIYCLGPE Sbjct: 333 RLLQSPCYNPVSFVKAKLPT-GKNFRI-PLSVSERLKNHNVMSCHRALITPTKIYCLGPE 390 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LET+NY+VKNFA +ASDF+RVTFVEEDWSKLS NAIS V G+F++P++TKIY RILSI Sbjct: 391 LETANYVVKNFAEYASDFMRVTFVEEDWSKLSANAISTGVHLGVFSRPFKTKIYDRILSI 450 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 L+ GIVIG KRF FLAFSASQLRSNSVWMFASN+ VKAEDIREWMGCF KIRS+SKCA+R Sbjct: 451 LQNGIVIGDKRFKFLAFSASQLRSNSVWMFASNDEVKAEDIREWMGCFKKIRSISKCASR 510 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S T+ V Q VEI+ DIEV DG++YCFSDGIGKIS FARQVA+KCGLN+ Sbjct: 511 MGQLFSSSMPTLVVPVQDVEIIDDIEVKTDGINYCFSDGIGKISLPFARQVAEKCGLNHI 570 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGGYKGV+AVDRNSF K+SLR SMLKFES RMLN+TKWS++MPC+LNREIV Sbjct: 571 PSAFQIRYGGYKGVVAVDRNSFWKMSLRDSMLKFESKVRMLNVTKWSESMPCFLNREIVT 630 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 L STLG++D+ GKMLT EAALD L+S+GG K IL+ M LQ P+ Sbjct: 631 LFSTLGIKDEVFERMQEEQLCLLGKMLTNREAALDTLQSLGGVNSKNILVEM-LQFDEPN 689 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 ++PYLSMMLQ+H+EN LSDL+SRCR+F+PKGR+L+GCLDETG LNYGQVY I M KAEL Sbjct: 690 VQPYLSMMLQAHYENLLSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAEL 749 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 + Q++F+ VDE TA+V GKVVVTKNPCLHPGD K V+C++FP+K Sbjct: 750 ECADQSYFRKVDEETAIVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPEK 809 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 GERPHPNECSGGDLDGD +FISWD++LIP QT PMDYTGRRPRIMDHEVTLEEIQ+FFV Sbjct: 810 GERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFV 869 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMI+DTLGAISTAHLVHADREP KA + CL LATLHSMAVDFAKTGA AEMPR LKPR Sbjct: 870 DYMINDTLGAISTAHLVHADREPYKARSENCLALATLHSMAVDFAKTGAPAEMPRALKPR 929 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332 EFPDFM+R +KPMY S GVLGKLYR + + S + T + AYD DL V G+E Sbjct: 930 EFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQIRSKFVWTKEMAELAYDHDLEVNGFES 989 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 I A+ HKEMY +RMS L++YY E E EILTGN+ K+ +L RDNRRY E+K+RI++S Sbjct: 990 LISVAETHKEMYEERMSLLMSYYDVEYEDEILTGNMYNKAQFLLRDNRRYGEMKERIVLS 1049 Query: 2513 AKSLQKEVKRWF-TGCCKEDDHQKLASAWYHVTY 2611 K LQ+E K WF + C K D+HQKLASAWY+VTY Sbjct: 1050 VKDLQREAKEWFKSSCSKADEHQKLASAWYYVTY 1083 >gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] Length = 1147 Score = 1137 bits (2940), Expect = 0.0 Identities = 576/874 (65%), Positives = 674/874 (77%), Gaps = 4/874 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 +FLWVRTTDFS IKSIG S+S WE G P D+ L+ S Sbjct: 213 DFLWVRTTDFSRIKSIGQSTSFYWEFNAGFSISDMSTYLPCYREDIQSPSLEARREFSSP 272 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 SE VPLV PSD KL YEILFQLN+LVHTQKIS+ AVDTDLI +LS L ++TA+MILQK+ Sbjct: 273 SEIVPLVKFPSDSKLAYEILFQLNALVHTQKISIAAVDTDLIGILSGLPVETAVMILQKL 332 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 LQS C+ PV+F+K +L GKN + P S RL NHN+MS R L+TP+KIYCLGPE Sbjct: 333 RLLQSPCYNPVSFVKAKLPT-GKNYRI-PLSVSERLKNHNVMSCRRALITPTKIYCLGPE 390 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LET+NY+VKNF +ASDF+RVTFVEEDWSKLS NAIS V G+F++P++TKIY RIL + Sbjct: 391 LETANYVVKNFVEYASDFMRVTFVEEDWSKLSANAISTGVHLGVFSRPFKTKIYDRILYV 450 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 L+ GIVIG KRF FLAFSASQLRSNSVWMFASN+ VKAEDIREWMGCF KIRS+SKCA+R Sbjct: 451 LQNGIVIGDKRFEFLAFSASQLRSNSVWMFASNDEVKAEDIREWMGCFKKIRSISKCASR 510 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S T+ V Q VEI+ DIEV DG++YCFSDGIGKIS FARQVA+KCGLN+ Sbjct: 511 MGQLFSSSMPTLVVPVQDVEIIDDIEVKTDGINYCFSDGIGKISLPFARQVAEKCGLNHI 570 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGGYKGV+AVDRNSF K+SLR SMLKFES RMLN+TKWS++MPC+LNREIV Sbjct: 571 PSAFQIRYGGYKGVVAVDRNSFWKMSLRDSMLKFESKVRMLNVTKWSESMPCFLNREIVT 630 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 L STLG++D+ GKMLT EAALD L+S+GG K IL+ M LQ Y P+ Sbjct: 631 LFSTLGIKDEVFERMQEEQLCLLGKMLTNREAALDTLQSLGGVNSKNILVEM-LQFYEPN 689 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 ++PYLSMMLQ+H+EN LSDL+SRCR+F+PKGR+L+GCLDETG LNYGQVY I M KAEL Sbjct: 690 VQPYLSMMLQAHYENLLSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAEL 749 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 + Q++F+ VDE TA+V GKVVVTKNPCLHPGD K V+C++FPQK Sbjct: 750 ECADQSYFRKVDEETAIVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPQK 809 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 GERPHPNECSGGDLDGD +FISWD++LIP QT PMDYTGRRPRIMDHEVTLEEIQ+FFV Sbjct: 810 GERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFV 869 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMI+DTLGAISTAHLVHADREPDKA + CL LATLHSMAVDFAKTGA AEMPR LKPR Sbjct: 870 DYMINDTLGAISTAHLVHADREPDKACSENCLALATLHSMAVDFAKTGAPAEMPRALKPR 929 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCTIQDA---YDLDLLVEGYED 2332 EFPDFM+R +KPMY S GVLGKLYR + + S + T + A YD DL V G+E Sbjct: 930 EFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQTRSKFVWTKEMAELVYDHDLEVNGFES 989 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 I A+ HKEMY +RMS L++YY E E EILTGN+ K+ +L RDNRRY E+K+RI++S Sbjct: 990 LISVAETHKEMYEERMSLLMSYYDVEYEDEILTGNIYNKAQFLLRDNRRYGEMKERIVLS 1049 Query: 2513 AKSLQKEVKRWF-TGCCKEDDHQKLASAWYHVTY 2611 K LQ+E K WF + C K D+HQKLASAWY+VTY Sbjct: 1050 VKDLQREAKEWFKSSCSKADEHQKLASAWYYVTY 1083 >ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X2 [Glycine max] Length = 941 Score = 1129 bits (2921), Expect = 0.0 Identities = 558/874 (63%), Positives = 687/874 (78%), Gaps = 4/874 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 EFLWVRTTDFS +KSIG S+S CWEI + P ++ DL L+ S+ Sbjct: 33 EFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLALDVFKSFPLYKENLRDLALEDGEEFCSS 92 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 +E VPLV S KLPYE LFQLNSLVHTQKISL +VD +LI++L+ L+ +T +I K+ Sbjct: 93 TEAVPLVKRASQSKLPYEALFQLNSLVHTQKISLASVDDELIDLLAGLDEETRAVIFLKL 152 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 HK+ TC+EP+ F+KT+LHVL K P SS RL + N+MS HR L+TP+KIYCLGPE Sbjct: 153 HKMSFTCYEPLKFVKTQLHVLSNKKKGLPQSSQKRLTDSNIMSCHRALITPTKIYCLGPE 212 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LETSN++VK+FASHASDF+R+TFVEE+W+KL NA+S V++G+F+KP +T+IY RIL+I Sbjct: 213 LETSNHVVKHFASHASDFMRITFVEENWNKLPTNAVSTGVQKGLFSKPLKTEIYKRILTI 272 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LR+GIVIG+KRF FLAFSASQLRSNSVW+FASN+ +KA DIREWMGCFN IRSVSKCAAR Sbjct: 273 LRDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAAR 332 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S QT EV Q VEI+PD+EV +DGVSYCFSDGIGKISQ+FARQVAQK L++T Sbjct: 333 MGQLFSSSMQTFEVVSQDVEIIPDVEVISDGVSYCFSDGIGKISQSFARQVAQKLKLDHT 392 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGG+KGVIAVDR SFRKLSLR SMLKFES N ML +TKWS++MPC+LNREI+ Sbjct: 393 PSAFQIRYGGFKGVIAVDRRSFRKLSLRSSMLKFESKNSMLCVTKWSESMPCFLNREIIS 452 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LLSTLGV+D+ G+MLT ++AAL+VLES+ G + K IL++ML + P+ Sbjct: 453 LLSTLGVKDEVLLAMQHDQLDLLGRMLTDSKAALEVLESLNGADSKSILVKMLHEFNEPN 512 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 EPYLSMML++++ QLSDL+SRCR+F+PKGRVLVGCLDETG+LNYGQV+ RIT+TK Sbjct: 513 SEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGRVLVGCLDETGLLNYGQVFVRITVTKTRE 572 Query: 1622 QNGQQNFFQM-VDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQ 1798 + G +N ++ D+ T ++ GKVVVTKNPCLHPGD K +C++FPQ Sbjct: 573 KFGDENLRKVDGDDNTCIIVGKVVVTKNPCLHPGDIRVLDAIYSEELEEKGLRDCLVFPQ 632 Query: 1799 KGERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFF 1978 KG RPHPNECSGGDLDGDL+FISWD++LIP QT PMDYTGRRPRIMDH+VTLEEIQ+FF Sbjct: 633 KGHRPHPNECSGGDLDGDLFFISWDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQFF 692 Query: 1979 VDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKP 2158 VDYMI+DTLGAISTAHLVHADRE DKA + KCL+LA LHSMAVDFAKTGA A MPR LKP Sbjct: 693 VDYMINDTLGAISTAHLVHADREQDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKP 752 Query: 2159 REFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYE 2329 REFPDFMER DKPMYIS+GVLGKLYR +++ + + + ++AYD L V G+E Sbjct: 753 REFPDFMERVDKPMYISKGVLGKLYRAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNGFE 812 Query: 2330 DFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILV 2509 F+E A HKEMY ++MSSL+++YGAE E E+L GNL+ ++ YLQRDNRRY ++KDRIL+ Sbjct: 813 AFLETASTHKEMYAEKMSSLMDFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILL 872 Query: 2510 SAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 S K+LQ+E K WF C+ +++ +ASAWYHVTY Sbjct: 873 SVKNLQREAKEWFETSCEPHEYKPMASAWYHVTY 906 >ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine max] Length = 1121 Score = 1129 bits (2921), Expect = 0.0 Identities = 558/874 (63%), Positives = 687/874 (78%), Gaps = 4/874 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 EFLWVRTTDFS +KSIG S+S CWEI + P ++ DL L+ S+ Sbjct: 213 EFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLALDVFKSFPLYKENLRDLALEDGEEFCSS 272 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 +E VPLV S KLPYE LFQLNSLVHTQKISL +VD +LI++L+ L+ +T +I K+ Sbjct: 273 TEAVPLVKRASQSKLPYEALFQLNSLVHTQKISLASVDDELIDLLAGLDEETRAVIFLKL 332 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 HK+ TC+EP+ F+KT+LHVL K P SS RL + N+MS HR L+TP+KIYCLGPE Sbjct: 333 HKMSFTCYEPLKFVKTQLHVLSNKKKGLPQSSQKRLTDSNIMSCHRALITPTKIYCLGPE 392 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LETSN++VK+FASHASDF+R+TFVEE+W+KL NA+S V++G+F+KP +T+IY RIL+I Sbjct: 393 LETSNHVVKHFASHASDFMRITFVEENWNKLPTNAVSTGVQKGLFSKPLKTEIYKRILTI 452 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LR+GIVIG+KRF FLAFSASQLRSNSVW+FASN+ +KA DIREWMGCFN IRSVSKCAAR Sbjct: 453 LRDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAAR 512 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S QT EV Q VEI+PD+EV +DGVSYCFSDGIGKISQ+FARQVAQK L++T Sbjct: 513 MGQLFSSSMQTFEVVSQDVEIIPDVEVISDGVSYCFSDGIGKISQSFARQVAQKLKLDHT 572 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGG+KGVIAVDR SFRKLSLR SMLKFES N ML +TKWS++MPC+LNREI+ Sbjct: 573 PSAFQIRYGGFKGVIAVDRRSFRKLSLRSSMLKFESKNSMLCVTKWSESMPCFLNREIIS 632 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LLSTLGV+D+ G+MLT ++AAL+VLES+ G + K IL++ML + P+ Sbjct: 633 LLSTLGVKDEVLLAMQHDQLDLLGRMLTDSKAALEVLESLNGADSKSILVKMLHEFNEPN 692 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 EPYLSMML++++ QLSDL+SRCR+F+PKGRVLVGCLDETG+LNYGQV+ RIT+TK Sbjct: 693 SEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGRVLVGCLDETGLLNYGQVFVRITVTKTRE 752 Query: 1622 QNGQQNFFQM-VDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQ 1798 + G +N ++ D+ T ++ GKVVVTKNPCLHPGD K +C++FPQ Sbjct: 753 KFGDENLRKVDGDDNTCIIVGKVVVTKNPCLHPGDIRVLDAIYSEELEEKGLRDCLVFPQ 812 Query: 1799 KGERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFF 1978 KG RPHPNECSGGDLDGDL+FISWD++LIP QT PMDYTGRRPRIMDH+VTLEEIQ+FF Sbjct: 813 KGHRPHPNECSGGDLDGDLFFISWDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQFF 872 Query: 1979 VDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKP 2158 VDYMI+DTLGAISTAHLVHADRE DKA + KCL+LA LHSMAVDFAKTGA A MPR LKP Sbjct: 873 VDYMINDTLGAISTAHLVHADREQDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKP 932 Query: 2159 REFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYE 2329 REFPDFMER DKPMYIS+GVLGKLYR +++ + + + ++AYD L V G+E Sbjct: 933 REFPDFMERVDKPMYISKGVLGKLYRAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNGFE 992 Query: 2330 DFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILV 2509 F+E A HKEMY ++MSSL+++YGAE E E+L GNL+ ++ YLQRDNRRY ++KDRIL+ Sbjct: 993 AFLETASTHKEMYAEKMSSLMDFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILL 1052 Query: 2510 SAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 S K+LQ+E K WF C+ +++ +ASAWYHVTY Sbjct: 1053 SVKNLQREAKEWFETSCEPHEYKPMASAWYHVTY 1086 >gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris] Length = 1119 Score = 1118 bits (2893), Expect = 0.0 Identities = 551/873 (63%), Positives = 684/873 (78%), Gaps = 3/873 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 EFLWVRTTDFS +KSIG S+S CWEI + P ++ DL L+ S+ Sbjct: 212 EFLWVRTTDFSALKSIGHSTSFCWEIAEEQLASDVFTSLPLYKENLRDLVLEDGEEFCSS 271 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 +E VPLV S KLPYE LFQLNSLVHTQKISL +VD +LI++L L+ + +I QK+ Sbjct: 272 TEAVPLVKCASQSKLPYEALFQLNSLVHTQKISLASVDDELIDLLGGLDEEIRAVIFQKL 331 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 H++ TC++P+ F+KT+LHVL ++QP SS RL+++N+MS HR LVTP+KIYCLGPE Sbjct: 332 HQMGFTCYDPLKFVKTQLHVLSNKKRSQPLSSQKRLIDNNIMSCHRALVTPTKIYCLGPE 391 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LETSN++VK+FAS ASDF+R+TFVEE+W+KL A+S V++GIF+KP++T+IY RIL+I Sbjct: 392 LETSNHVVKHFASCASDFMRITFVEENWNKLPNYAVSTGVQKGIFSKPFKTEIYKRILTI 451 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LR+GIVIG+KRF FLAFSASQLRSNSVW+FASN+ VKA DIREWMGCFN IRSVSKCAAR Sbjct: 452 LRDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNVKATDIREWMGCFNNIRSVSKCAAR 511 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S QT EV PQ VE++PDIEVT+DGVSYCFSDGIGKISQ+F RQVAQK L++T Sbjct: 512 MGQLFSSSMQTFEVAPQDVEVIPDIEVTSDGVSYCFSDGIGKISQSFGRQVAQKLKLDHT 571 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIR+GGYKGVI VDR+SFRKLSLR SMLKFES NRML +TKWS++MPC+LNREI+ Sbjct: 572 PSAFQIRFGGYKGVITVDRHSFRKLSLRNSMLKFESKNRMLCVTKWSESMPCFLNREIIS 631 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LLSTLGV+D+A G+MLT ++AALDVLE + G + + IL++ML + P+ Sbjct: 632 LLSTLGVKDEAFLARQQDQLNLLGRMLTDSKAALDVLEGLNGADSRSILVKMLHEFNEPN 691 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 EPYLSMML++++ QLSDL+SR R+F+PKGRVLVGCLDETG+LNYG+V+ R+T+ + Sbjct: 692 SEPYLSMMLKAYYAYQLSDLKSRSRIFVPKGRVLVGCLDETGLLNYGEVFVRVTVKRTTE 751 Query: 1622 QNGQQNFFQMVDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQK 1801 + D++T ++ GKVVVTKNPCLHPGD K +C++FPQ Sbjct: 752 KFDDNLRKGGDDDSTRIIVGKVVVTKNPCLHPGDVRVLDAIYNEELEEKGLRDCLVFPQN 811 Query: 1802 GERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 1981 G RPHPNECSGGDLDGDL+FISWD++LIP QT PMDYTGRRPRIMDH+VTLEEIQ FFV Sbjct: 812 GHRPHPNECSGGDLDGDLFFISWDKDLIPAQTEAPMDYTGRRPRIMDHKVTLEEIQHFFV 871 Query: 1982 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 2161 DYMI+DTLGAISTAHLVHADREPDKA + KCL+LA LHSMAVDFAKTGA A MPR LKPR Sbjct: 872 DYMINDTLGAISTAHLVHADREPDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKPR 931 Query: 2162 EFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYED 2332 EFPDFMER +KPMYIS+GVLGKLYR +++ + + + ++AYD L V G+E Sbjct: 932 EFPDFMERVEKPMYISKGVLGKLYRAIIESQMQIKYSFVWSEKLAEEAYDRSLEVNGFEA 991 Query: 2333 FIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 2512 F+E A +HKEMY +MSSL+N+YGAE E E+L GNL+ ++ YLQRDNRRY ++KDRIL+S Sbjct: 992 FLETASSHKEMYAQKMSSLMNFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILLS 1051 Query: 2513 AKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 K+LQ+E K WF C+ +++ +ASAWYHVTY Sbjct: 1052 VKNLQREAKEWFETSCQPHEYRPMASAWYHVTY 1084 >ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Glycine max] Length = 1120 Score = 1118 bits (2891), Expect = 0.0 Identities = 550/874 (62%), Positives = 685/874 (78%), Gaps = 4/874 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 EFLWVRTTDFS +KSIG S+S CWEI + P ++ DL L+ + S Sbjct: 212 EFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLASDVFTSFPLYKENLRDLALEDREELCSL 271 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 +E VPLV + KLPYE +FQLNSLVHTQKISL +VD +LI++L+ L+ +T ++ QK+ Sbjct: 272 TEAVPLVKHATQSKLPYEAVFQLNSLVHTQKISLASVDDELIDLLADLDEETRAVVFQKL 331 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 HK+ TC+EP+ F+KT+LHVL K S NRL + N+MS HR L+TP+KIYCLGPE Sbjct: 332 HKMSFTCYEPLKFVKTQLHVLSNKKKGLLQSPQNRLTDSNIMSCHRALITPTKIYCLGPE 391 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LETSN++VK+FAS ASDF+R+TFVEE+W+KL NA+S V++GIF+KP +T+IY RIL+I Sbjct: 392 LETSNHVVKHFASLASDFMRITFVEENWNKLPTNAVSTGVQKGIFSKPLKTEIYKRILTI 451 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LR+GIVIG+KRF FLAFSASQLRSNSVW+FASN+ +KA DIREWMGCFN IRSVSKCAAR Sbjct: 452 LRDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAAR 511 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGLNYT 1081 MGQLFS+S QT EV + VE++PDIEVT+DGVSYCFSDGIGKISQ FARQVAQK L++T Sbjct: 512 MGQLFSSSMQTFEVASEDVEMIPDIEVTSDGVSYCFSDGIGKISQCFARQVAQKLNLDHT 571 Query: 1082 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREIVI 1261 PSAFQIRYGG+KGVIA+DR+SFRKLSLR SMLKFES NRML +TKWS++MPC+LNREI+ Sbjct: 572 PSAFQIRYGGFKGVIAIDRHSFRKLSLRSSMLKFESNNRMLCVTKWSESMPCFLNREIIS 631 Query: 1262 LLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYAPS 1441 LL+TLGV+D+ G+MLT ++AALDVLES+ G + K IL++ML + P+ Sbjct: 632 LLTTLGVKDEVLLAMQQDQLDLLGRMLTDSKAALDVLESLNGADSKSILVKMLHEFNEPN 691 Query: 1442 LEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKAEL 1621 EPYLSMML++++ QLSDL+SRCR+F+PKGRVLVGCLDETG+LNYGQV+ RIT+ K Sbjct: 692 SEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGRVLVGCLDETGLLNYGQVFVRITVAKTRE 751 Query: 1622 QNGQQNFFQM-VDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIFPQ 1798 G +N ++ D++T ++ GKVVVTKNPCLHPGD +C++FPQ Sbjct: 752 NFGDENLRKVDGDDSTRIIVGKVVVTKNPCLHPGDIRVLDAIYSKELEENGLRDCLVFPQ 811 Query: 1799 KGERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFF 1978 KG RPHPNECSGGDLDGDL+F+SWD++LIP QT PMDYTGRRPRIMDH+VTLEEIQ+FF Sbjct: 812 KGHRPHPNECSGGDLDGDLFFLSWDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQFF 871 Query: 1979 VDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKP 2158 VDYMI+DTLGAISTAHLVHADRE DKA + KCL+LA LHSMAVDFAKTGA A MPR LKP Sbjct: 872 VDYMINDTLGAISTAHLVHADREQDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKP 931 Query: 2159 REFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEGYE 2329 REFPDFMER DKPMYIS+GVLGKLY +++ + + + ++AYD L V G+E Sbjct: 932 REFPDFMERVDKPMYISKGVLGKLYHAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNGFE 991 Query: 2330 DFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILV 2509 F+E A HKEMY ++MSSL+++YGAE E E+L GN++ ++ YLQRDNRRY ++KDRIL+ Sbjct: 992 AFLETASTHKEMYAEKMSSLMDFYGAETEDEMLLGNVQNRASYLQRDNRRYGDMKDRILL 1051 Query: 2510 SAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 S K+LQ+E K WF C+ +++ +ASAWYHVTY Sbjct: 1052 SVKNLQREAKEWFETSCQPREYKPMASAWYHVTY 1085 >ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago truncatula] gi|355509999|gb|AES91141.1| Rna-dependent RNA polymerase [Medicago truncatula] Length = 1308 Score = 1113 bits (2879), Expect = 0.0 Identities = 549/876 (62%), Positives = 690/876 (78%), Gaps = 6/876 (0%) Frame = +2 Query: 2 EFLWVRTTDFSGIKSIGCSSSLCWEIEDGXXXXXXXXXXPYANNDVIDLYLDKVGNIYSA 181 EF+WVRTTDFS +KSIG S+S WEI + P ++ DL L+ S Sbjct: 214 EFMWVRTTDFSTLKSIGHSTSFFWEIVEESFDSDVFRSFPLYRENLKDLSLEDGEKFCSP 273 Query: 182 SEFVPLVSSPSDLKLPYEILFQLNSLVHTQKISLGAVDTDLIEVLSKLELDTAMMILQKM 361 +E VPLV D KLPYE LFQLNSLVHTQKISL +V+ +LI++L+ L+ +T +I QK+ Sbjct: 274 TETVPLVKCRLDSKLPYESLFQLNSLVHTQKISLASVNDELIDLLASLDAETKAVIFQKL 333 Query: 362 HKLQSTCFEPVTFIKTRLHVLGKNSKNQPSSSYNRLVNHNMMSVHRVLVTPSKIYCLGPE 541 HK+ STC+EP+ +++T+LHVL K+ S RLV++N+MS HR L+TPSKIYCLGPE Sbjct: 334 HKMNSTCYEPLKYVRTQLHVLSIKKKSVLPSQQKRLVDNNIMSCHRALITPSKIYCLGPE 393 Query: 542 LETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSI 721 LETSN++VK+FA++ASDF+R+TFVEEDWSKL NAIS+++++G+F++P RT+IY R+L+I Sbjct: 394 LETSNHVVKHFAAYASDFMRITFVEEDWSKLPNNAISITLKKGMFSRPLRTEIYKRVLNI 453 Query: 722 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAAR 901 LR+GI+IG+KRF FLAFSASQLRSNSVW+FASN+ VKA DIREWMG FN IRSVSKCAAR Sbjct: 454 LRDGILIGSKRFEFLAFSASQLRSNSVWLFASNDKVKAADIREWMGSFNNIRSVSKCAAR 513 Query: 902 MGQLFSTSFQTMEVQPQHVEILPDIEVTADGVSYCFSDGIGKISQAFARQVAQKCGL--N 1075 MGQLFS+S QT E+ PQ V+++PDIE+T+DG+ YCFSDGIGKISQ+FARQ+A+K L N Sbjct: 514 MGQLFSSSRQTFEMAPQDVDLIPDIEITSDGIDYCFSDGIGKISQSFARQLAEKLKLDEN 573 Query: 1076 YTPSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESANRMLNITKWSDAMPCYLNREI 1255 PSAFQIRYGGYKGVIAVDR+SF+KLSLR+SMLKFES NRML +TKWS++MPC+LNREI Sbjct: 574 RIPSAFQIRYGGYKGVIAVDRHSFKKLSLRKSMLKFESKNRMLCVTKWSESMPCFLNREI 633 Query: 1256 VILLSTLGVEDKAXXXXXXXXXXXXGKMLTTNEAALDVLESIGGGEVKKILMRMLLQGYA 1435 + LLSTLG++D+A GKMLT EAALDVLES+ G + IL++ML + Y Sbjct: 634 ISLLSTLGIKDEALLALQEDQLQLLGKMLTDKEAALDVLESLNGADSNSILVKMLHRFYE 693 Query: 1436 PSLEPYLSMMLQSHFENQLSDLRSRCRVFIPKGRVLVGCLDETGILNYGQVYARITMTKA 1615 P+ EPYLSMML++H+ QLSDL+SRCR+F+PKGRVL+GCLDETG+LNYGQV+ RIT+ K Sbjct: 694 PNSEPYLSMMLKAHYTYQLSDLKSRCRIFVPKGRVLIGCLDETGLLNYGQVFVRITVAKT 753 Query: 1616 ELQNGQQNFFQM-VDETTAVVRGKVVVTKNPCLHPGDXXXXXXXXXXXXXXKAWVNCIIF 1792 + + G +N + D++T ++ GKVVVTKNPCLHPGD K +C++F Sbjct: 754 KEKFGDENLRNVDGDDSTRIIVGKVVVTKNPCLHPGDIRVLDAVYSEELEEKGLRDCLVF 813 Query: 1793 PQKGERPHPNECSGGDLDGDLYFISWDENLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQR 1972 PQKG RPHPNECSGGDLDGDL+FISWD++LIP QT PMDYTGRRPRIMDH+VTLEEI + Sbjct: 814 PQKGHRPHPNECSGGDLDGDLFFISWDKDLIPAQTENPMDYTGRRPRIMDHKVTLEEIHQ 873 Query: 1973 FFVDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFL 2152 FFVDYMI+DTLGAISTAHLVHADRE DKA + KCL+LA LHSMAVDFAKTGA AEMPR L Sbjct: 874 FFVDYMINDTLGAISTAHLVHADREHDKAKSRKCLELAELHSMAVDFAKTGAPAEMPRSL 933 Query: 2153 KPREFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCT---IQDAYDLDLLVEG 2323 KPREFPDFMER++KPMYIS+GVLGKLYR + + D++ + ++AYD L V+G Sbjct: 934 KPREFPDFMERFEKPMYISKGVLGKLYRATIDSNLQVRFDMVMSEKFAKEAYDHQLEVDG 993 Query: 2324 YEDFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRI 2503 +E F+E A +H++MY +M SL+++YGA E E+LTGNL+ ++ YLQRDNRRY ++KDRI Sbjct: 994 FEVFLETALSHRDMYAQKMISLMSFYGATTEDEMLTGNLQNRASYLQRDNRRYGDMKDRI 1053 Query: 2504 LVSAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 L+S K LQ E K WF C+ ++Q +ASAWYHVTY Sbjct: 1054 LISVKDLQLEAKEWFESDCQPHEYQLMASAWYHVTY 1089 Score = 158 bits (399), Expect = 1e-35 Identities = 95/226 (42%), Positives = 125/226 (55%) Frame = +2 Query: 1934 IMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDF 2113 I+ H + +I +FFVDYMI DTLGAISTAHLVHAD E +KA + KCL+LA LHSMAVDF Sbjct: 1110 ILLHIKSANKIHKFFVDYMIKDTLGAISTAHLVHADCESNKAKSRKCLELAELHSMAVDF 1169 Query: 2114 AKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVVKFFIHRNSDVLCTIQD 2293 AKTGA AEMPR LKP+EFPDFMER++KPMY+S+GVLGKLYR +V+ + S Sbjct: 1170 AKTGALAEMPRVLKPKEFPDFMERFEKPMYVSKGVLGKLYRALVESTMQLTS-------- 1221 Query: 2294 AYDLDLLVEGYEDFIENAKNHKEMYLDRMSSLLNYYGAEKEVEILTGNLRQKSVYLQRDN 2473 +F+ + +L + ++N K + LQ + Sbjct: 1222 ------------NFVSSGN-----FLSKKHMIINL----------------KLMDLQLEV 1248 Query: 2474 RRYFELKDRILVSAKSLQKEVKRWFTGCCKEDDHQKLASAWYHVTY 2611 + +FE C+ +HQ +ASAWYHV + Sbjct: 1249 KEWFE---------------------SDCQPHEHQLMASAWYHVIH 1273