BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00015198
         (594 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containi...    91   3e-16
ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containi...    91   3e-16
ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containi...    86   6e-15
gb|EOX97788.1| Pentatricopeptide repeat-containing protein, puta...    83   6e-14
ref|XP_002534048.1| pentatricopeptide repeat-containing protein,...    77   4e-12
ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi...    75   1e-11
emb|CBI37948.3| unnamed protein product [Vitis vinifera]               75   1e-11
ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containi...    75   2e-11
gb|EMJ00876.1| hypothetical protein PRUPE_ppa000631mg [Prunus pe...    75   2e-11
ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containi...    73   6e-11
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi...    73   6e-11
ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Popu...    72   8e-11
emb|CAN69936.1| hypothetical protein VITISV_038780 [Vitis vinifera]    72   8e-11
gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis]      72   1e-10
ref|XP_006833268.1| hypothetical protein AMTR_s00357p00011320, p...    72   1e-10
gb|ESW03718.1| hypothetical protein PHAVU_011G0363000g, partial ...    71   2e-10
ref|XP_006840107.1| hypothetical protein AMTR_s00224p00011500 [A...    70   5e-10
ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citr...    69   7e-10
ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08

>ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 1109

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 50/78 (64%), Positives = 54/78 (69%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWF------------------QTRQR 450
            RIN+A+A+LLRRLGLPY GNES GKI INGVIVKRWF                  QTR R
Sbjct: 1032 RINRAVAALLRRLGLPYQGNESFGKIRINGVIVKRWFQPKLESPFSWEQTDFSFSQTRLR 1091

Query: 449  KGISHQQRDIRAGNLSLD 396
            KGISHQQR IR G+LSLD
Sbjct: 1092 KGISHQQRTIRTGDLSLD 1109


>ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1140

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 50/78 (64%), Positives = 54/78 (69%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWF------------------QTRQR 450
            RIN+A+A+LLRRLGLPY GNES GKI INGVIVKRWF                  QTR R
Sbjct: 1063 RINRAVAALLRRLGLPYQGNESFGKIRINGVIVKRWFQPKLESPFSWEQTDFSFSQTRLR 1122

Query: 449  KGISHQQRDIRAGNLSLD 396
            KGISHQQR IR G+LSLD
Sbjct: 1123 KGISHQQRTIRTGDLSLD 1140


>ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Cucumis sativus]
          Length = 1108

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 46/78 (58%), Positives = 53/78 (67%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRW------------------FQTRQR 450
            R+ QA+A+LLRRLGLPY GNES GKI ING+ ++RW                  FQ+R R
Sbjct: 1031 RVGQAVAALLRRLGLPYQGNESSGKIRINGLALRRWLQPKLSDSLSGKPGEFGTFQSRLR 1090

Query: 449  KGISHQQRDIRAGNLSLD 396
            KGISHQQRDIR GNLSLD
Sbjct: 1091 KGISHQQRDIRIGNLSLD 1108


>ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1182

 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 48/78 (61%), Positives = 53/78 (67%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWF------------------QTRQR 450
            RIN+A+A+LLRRL LPY GNES GKI INGVI+KRWF                  QTR R
Sbjct: 1105 RINRAVAALLRRLRLPYQGNESFGKIRINGVIMKRWFQPKLESPFSWEQTGFSFSQTRLR 1164

Query: 449  KGISHQQRDIRAGNLSLD 396
            KGISHQQR IR G+LSLD
Sbjct: 1165 KGISHQQRTIRTGDLSLD 1182


>gb|EOX97788.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao]
          Length = 1110

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 46/78 (58%), Positives = 51/78 (65%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWF------------------QTRQR 450
            RI QAIA+LLRR+GLPY GNES GKI ING+ +KRWF                  Q R  
Sbjct: 1033 RIGQAIAALLRRIGLPYQGNESFGKIRINGLALKRWFQPKLASPFTGKPGEWNASQMRLG 1092

Query: 449  KGISHQQRDIRAGNLSLD 396
            KGISHQQR+IR GNLSLD
Sbjct: 1093 KGISHQQRNIRTGNLSLD 1110


>ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223525928|gb|EEF28334.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1129

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 42/78 (53%), Positives = 51/78 (65%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWFQ------------------TRQR 450
            RI+Q +ASLLRRLGLPY GNES GKI ING+ ++RW Q                  +R  
Sbjct: 1052 RISQDVASLLRRLGLPYQGNESYGKIRINGISLRRWLQPKLASPFSGKPEELSFSLSRIG 1111

Query: 449  KGISHQQRDIRAGNLSLD 396
            KGI+HQQR+IR GNLSL+
Sbjct: 1112 KGITHQQRNIRTGNLSLN 1129


>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Vitis vinifera]
          Length = 1115

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWF------------------QTRQR 450
            RI+QA+AS+LRRLGLPY GNES GKI ING+  +RWF                  Q+R  
Sbjct: 1038 RISQAVASMLRRLGLPYQGNESRGKIRINGLATRRWFQPKLAGPFSGKVDELSSSQSRLG 1097

Query: 449  KGISHQQRDIRAGNLSLD 396
             GIS QQR IR GNLSLD
Sbjct: 1098 TGISLQQRKIRTGNLSLD 1115


>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
          Length = 1550

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWF------------------QTRQR 450
            RI+QA+AS+LRRLGLPY GNES GKI ING+  +RWF                  Q+R  
Sbjct: 1473 RISQAVASMLRRLGLPYQGNESRGKIRINGLATRRWFQPKLAGPFSGKVDELSSSQSRLG 1532

Query: 449  KGISHQQRDIRAGNLSLD 396
             GIS QQR IR GNLSLD
Sbjct: 1533 TGISLQQRKIRTGNLSLD 1550


>ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1028

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWF------------------QTRQR 450
            R+ Q++ASLLRRLG+ Y GNES GKI I+G+ +KRWF                  Q R  
Sbjct: 951  RVGQSVASLLRRLGIDYQGNESRGKIRISGLTLKRWFQPKLASPFTGKLAELGSSQLRLG 1010

Query: 449  KGISHQQRDIRAGNLSLD 396
            KGI HQQR+IR GNLSLD
Sbjct: 1011 KGIMHQQRNIRTGNLSLD 1028


>gb|EMJ00876.1| hypothetical protein PRUPE_ppa000631mg [Prunus persica]
          Length = 1060

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 17/77 (22%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWFQTRQR-----------------K 447
            R+ Q++A+LLRRLG+PY GNES GKI I+G+ +KRW Q +                   K
Sbjct: 984  RVGQSVAALLRRLGIPYQGNESRGKIKISGLAMKRWLQPKLASFTGKPGEFGSSQLQLGK 1043

Query: 446  GISHQQRDIRAGNLSLD 396
            GI+HQQR+IR GNLSLD
Sbjct: 1044 GITHQQRNIRTGNLSLD 1060


>ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
           chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 713

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 16/76 (21%)
 Frame = -2

Query: 575 RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWFQTRQR----------------KG 444
           R  QAIA+LLRRLGLPY GN S GKI ING+ +KRWFQ +                  K 
Sbjct: 638 RTTQAIAALLRRLGLPYQGNGSYGKIRINGLALKRWFQPKLASPFSGKPGELSSLQLGKF 697

Query: 443 ISHQQRDIRAGNLSLD 396
           I+HQQR+IR GNLSL+
Sbjct: 698 ITHQQRNIRTGNLSLE 713


>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 1072

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 16/76 (21%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWFQTRQR----------------KG 444
            R  QAIA+LLRRLGLPY GN S GKI ING+ +KRWFQ +                  K 
Sbjct: 997  RTTQAIAALLRRLGLPYQGNGSYGKIRINGLALKRWFQPKLASPFSGKPGELSSLQLGKF 1056

Query: 443  ISHQQRDIRAGNLSLD 396
            I+HQQR+IR GNLSL+
Sbjct: 1057 ITHQQRNIRTGNLSLE 1072


>ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Populus trichocarpa]
            gi|550341229|gb|EEE86674.2| hypothetical protein
            POPTR_0004s17400g [Populus trichocarpa]
          Length = 1104

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWFQ------------------TRQR 450
            RI++A+ASLLRRLGLPY GNES GKI ING+ ++RW Q                  +R  
Sbjct: 1027 RISRAVASLLRRLGLPYQGNESYGKIRINGISLRRWLQPKLDSPFSGKPGEWSTSLSRLG 1086

Query: 449  KGISHQQRDIRAGNLSLD 396
            KGIS QQR+IR G+ SL+
Sbjct: 1087 KGISFQQRNIRTGDFSLE 1104


>emb|CAN69936.1| hypothetical protein VITISV_038780 [Vitis vinifera]
          Length = 1206

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 42/78 (53%), Positives = 48/78 (61%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWF------------------QTRQR 450
            RI+QA+AS+LRRLGLPY GNES GKI ING+  +RW                   Q+R  
Sbjct: 1129 RISQAVASMLRRLGLPYQGNESRGKIRINGLAXRRWXQPKLAGPFSGKVDELSSSQSRLG 1188

Query: 449  KGISHQQRDIRAGNLSLD 396
             GIS QQR IR GNLSLD
Sbjct: 1189 TGISLQQRKIRTGNLSLD 1206


>gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis]
          Length = 1125

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWF------------------QTRQR 450
            RI +A+A+LLRRLGLPY G+ES GKI I G+ +KRWF                  Q R  
Sbjct: 1048 RIGRAVAALLRRLGLPYQGHESHGKIRIYGLTLKRWFKPKLASPFSGRPEEINLSQFRLG 1107

Query: 449  KGISHQQRDIRAGNLSLD 396
            K I+HQQR+IR GNLSLD
Sbjct: 1108 KEIAHQQRNIRTGNLSLD 1125


>ref|XP_006833268.1| hypothetical protein AMTR_s00357p00011320, partial [Amborella
           trichopoda] gi|548837933|gb|ERM98546.1| hypothetical
           protein AMTR_s00357p00011320, partial [Amborella
           trichopoda]
          Length = 132

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 41/77 (53%), Positives = 47/77 (61%), Gaps = 18/77 (23%)
 Frame = -2

Query: 575 RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWFQ------------------TRQR 450
           RI QA+ +LLRRLGLPY GNES GKI I+G+ +KRWFQ                  TR  
Sbjct: 31  RIGQALGALLRRLGLPYQGNESYGKIRISGLALKRWFQPKLALRFSRKQPEMSSPPTRLA 90

Query: 449 KGISHQQRDIRAGNLSL 399
           KGI+ QQR IR  NLSL
Sbjct: 91  KGITDQQRSIRTKNLSL 107


>gb|ESW03718.1| hypothetical protein PHAVU_011G0363000g, partial [Phaseolus
           vulgaris]
          Length = 108

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575 RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWFQ------------------TRQR 450
           R+ +AI +LLRRL +P+ GNES GK+ INGV +K WFQ                  +R  
Sbjct: 31  RMGKAIGALLRRLQIPHQGNESYGKLRINGVALKIWFQPKLASPFSGKPGDWSSSMSRLG 90

Query: 449 KGISHQQRDIRAGNLSLD 396
           KGISHQQR+IR GNLSLD
Sbjct: 91  KGISHQQRNIRIGNLSLD 108


>ref|XP_006840107.1| hypothetical protein AMTR_s00224p00011500 [Amborella trichopoda]
            gi|548841763|gb|ERN01782.1| hypothetical protein
            AMTR_s00224p00011500 [Amborella trichopoda]
          Length = 1185

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 40/77 (51%), Positives = 46/77 (59%), Gaps = 18/77 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWFQ------------------TRQR 450
            RI QA+ +LLRRLGLPY GNES GKI I+G+ +KRWFQ                  TR  
Sbjct: 1084 RIGQALGALLRRLGLPYQGNESYGKIRISGLALKRWFQPKLALRFSRKQPEMSSPPTRLA 1143

Query: 449  KGISHQQRDIRAGNLSL 399
            KGI+ QQ  IR  NLSL
Sbjct: 1144 KGITDQQHSIRTKNLSL 1160


>ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citrus clementina]
           gi|557525497|gb|ESR36803.1| hypothetical protein
           CICLE_v10027915mg [Citrus clementina]
          Length = 713

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 40/76 (52%), Positives = 47/76 (61%), Gaps = 16/76 (21%)
 Frame = -2

Query: 575 RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWFQTRQR----------------KG 444
           R  QAIA+LLRRLGLP  GN S GKI ING+ +KRWFQ +                  K 
Sbjct: 638 RTTQAIAALLRRLGLPNQGNGSYGKIRINGLALKRWFQPKLASPFSGKPGELSSLQLGKF 697

Query: 443 ISHQQRDIRAGNLSLD 396
           I+HQQR+IR GNLSL+
Sbjct: 698 ITHQQRNIRTGNLSLE 713


>ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Cicer arietinum]
          Length = 1113

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 18/78 (23%)
 Frame = -2

Query: 575  RINQAIASLLRRLGLPYSGNESCGKI*INGVIVKRWFQ------------------TRQR 450
            R  QA+A+L RRL +PY GNES GK+ IN + + +WFQ                  +R  
Sbjct: 1036 RAGQAVAALFRRLHIPYQGNESNGKLRINSLGLIKWFQPKLASPFSGLPGDWSSSESRLG 1095

Query: 449  KGISHQQRDIRAGNLSLD 396
            K ISHQQR+IR GNLSLD
Sbjct: 1096 KNISHQQRNIRTGNLSLD 1113