BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00014969
         (1581 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...   144   3e-53
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A...   147   6e-52
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...   144   4e-51
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...   128   6e-50
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...   130   2e-48
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A...   127   7e-48
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...   119   4e-47
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A...   125   3e-46
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A...   110   1e-44
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...   120   1e-44
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...   187   1e-44
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A...   105   4e-43
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...   111   5e-41
ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein A...   125   5e-39
gb|ABI34321.1| RNase H family protein [Solanum demissum]               94   2e-37
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A...    96   2e-36
ref|XP_006358679.1| PREDICTED: uncharacterized protein LOC102578...   157   9e-36
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...   101   1e-35
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260...    87   2e-34
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...   126   2e-34

>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score =  144 bits (363), Expect(2) = 3e-53
 Identities = 85/237 (35%), Positives = 125/237 (52%), Gaps = 3/237 (1%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W+ RCA K+     S+YRV+  I    MQ+    F  +  + +W +L +I E   Q   
Sbjct: 1212 LWKNRCAVKYGLKNSSIYRVQYGIFKNIMQVITIVFPSIPWQTSWNNLINIVEQCKQHYK 1271

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCLQ--GMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEV 1233
            I ++KW KP     KLNTDGS LQ  G    GGI+R   G  I+AFS+  G G++N AE+
Sbjct: 1272 ILIVKWNKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKIIYAFSLPFGFGTNNFAEI 1331

Query: 1234 ATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKLIED-HGFHI 1410
               L+ L WC+ + Y  +  E DS LL   IN +   PWR  +L+Q  H++I     F  
Sbjct: 1332 KAALHGLDWCEQHGYKKIELEVDSKLLCNWINSNINIPWRYEELIQQIHQIIRKMDQFQC 1391

Query: 1411 SYCFREINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTKPTK 1581
             + +RE N  AD L+  SH LE +  F +   L + +RG   L+K  + +F+ +  K
Sbjct: 1392 HHIYREANCTADLLSKWSHNLEILQKFYTTRQLKEPIRGSYLLEKMGVQNFRRRKLK 1448



 Score = 93.6 bits (231), Expect(2) = 3e-53
 Identities = 42/124 (33%), Positives = 72/124 (58%)
 Frame = +2

Query: 506  KRAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTI 685
            KR  +   + IW+K I FK++F  WR++  +LPT++ + ++G N++  C+CC  +  + I
Sbjct: 1092 KRNKDPINNIIWHKQIPFKVSFFIWRALRGKLPTNENLQRIGKNLSD-CYCCYNKGKDDI 1150

Query: 686  LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
                NH+   GNFA  +W+  ++ +GV   N TL+ L L W N +  N +   ++  LP+
Sbjct: 1151 ----NHILINGNFAKYIWKIYSSAVGVLPINTTLRDLLLQWRNQQYTNEVHKLLIHILPN 1206

Query: 866  IICW 877
             ICW
Sbjct: 1207 FICW 1210



 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
 Frame = +2

Query: 5    LVLLTTPREL*NSLKKSVLGSF-GLEN*NGGKHH*IAWVNLSYPYEEGGANFKNISDIFL 181
            L  ++ P+ + NS+KK +   F G+E  +G K+H  +W N+++P  EGG   + I D+  
Sbjct: 877  LSAISPPKTILNSIKKVIADFFWGIEK-DGKKYHWSSWNNMAFPTNEGGIGVRLIEDMCT 935

Query: 182  AFKAKQW*NLRTNYSL*GEFMRARYLLNQHSSKV--QWTKGNSQGWKTICEAKSHTERL 352
            AF+ KQW   RTN SL  +F++A+Y  NQ ++ V  ++  G+S  W+ +   +   E L
Sbjct: 936  AFQYKQWWAFRTNNSLWSKFLKAKY--NQRANPVAKKYNTGDSIVWRYLTRNRQKVESL 992


>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 601

 Score =  147 bits (370), Expect(2) = 6e-52
 Identities = 85/237 (35%), Positives = 129/237 (54%), Gaps = 3/237 (1%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W  RCA K+   + S+YRV+  I    MQI K ++  +  + +W  L +  +   Q   
Sbjct: 359  LWENRCAVKYGGKQSSIYRVQYGIFKDTMQIIKLEYSNIPWQYSWGHLINFIDQCQQQYK 418

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCLQ--GMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEV 1233
            I M++WIKP     KLNTDGSCLQ  G  E GGI+R + G+ IFAF+     G++N+A++
Sbjct: 419  IFMVRWIKPTIGRYKLNTDGSCLQENGNIEGGGILRDHQGSIIFAFASPFAFGTNNIAKL 478

Query: 1234 ATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKLIED-HGFHI 1410
               LY L+WC+ + Y  +  E DS LL+K I+   + PWR    VQ  H++ +  H F  
Sbjct: 479  KAALYGLEWCEQHGYKDIVLEIDSELLSKWISNTIQIPWRCQQYVQHIHEITKKLHHFQC 538

Query: 1411 SYCFREINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTKPTK 1581
             + +RE N  AD LA  SH +E    F +      ++RG   L+K  + +F+ +  K
Sbjct: 539  QHIYREENSTADLLAKWSHNIEIPQDFYTTRQFKGTIRGSYILEKMGIQNFRRRKVK 595



 Score = 86.3 bits (212), Expect(2) = 6e-52
 Identities = 40/128 (31%), Positives = 74/128 (57%)
 Frame = +2

Query: 506 KRAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTI 685
           KR+ +   + IW+K I FK++F  W ++  +LPT++ + +LG +I   C+CC ++    +
Sbjct: 239 KRSHDPINNIIWHKHIPFKISFFIWGALTGKLPTNEILQRLGRDI-VDCYCCYSK----V 293

Query: 686 LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
            + +NH+   GNFA  +W++ A+ +G    N  ++   L W + +T N +   ++  LP+
Sbjct: 294 KDDINHILLTGNFANYIWKKHASTVGALHVNTNMRSQLLYWRSLQTNNEVHKLLIHTLPN 353

Query: 866 IICWEYGE 889
           IICW   E
Sbjct: 354 IICWNLWE 361



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 34/116 (29%), Positives = 59/116 (50%)
 Frame = +2

Query: 5   LVLLTTPREL*NSLKKSVLGSFGLEN*NGGKHH*IAWVNLSYPYEEGGANFKNISDIFLA 184
           L  ++ P+     +KK +   F   + +  K+H  +W NLSYP  EGG   + + D+  A
Sbjct: 23  LEAISPPKTTLKCIKKVIADFFWGTDKDRKKYHWSSWENLSYPINEGGIGVRLLEDVCTA 82

Query: 185 FKAKQW*NLRTNYSL*GEFMRARYLLNQHSSKVQWTKGNSQGWKTICEAKSHTERL 352
           F+ KQW   RT  SL  +F++A+Y    +    ++  G+S  W+ + + +   E L
Sbjct: 83  FQYKQWWEFRTKKSLWSQFLKAKYCQRANPVAKKYDSGDSIVWRYLTKNRHKFESL 138


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score =  144 bits (363), Expect(2) = 4e-51
 Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 3/237 (1%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W+ RCA K+   + S++RVK  I    MQ+ K  F  +  + NW +L +I E   Q   
Sbjct: 1091 LWKNRCAVKYGKKRSSIHRVKYGIFKEVMQVIKLVFPSIPWQSNWNNLVNIIEHCSQQYK 1150

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCLQ--GMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEV 1233
            I ++ W KP   T KLNTDGS +Q  G    GG +R + G  ++AFSI  G G++N AE+
Sbjct: 1151 IVLVSWNKPALGTYKLNTDGSAIQNSGKIGGGGNLRDFQGKIVYAFSIPFGVGTNNFAEI 1210

Query: 1234 ATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKL-IEDHGFHI 1410
               LY ++WC+ + Y  V  E +S LL   I    K PWR  DLVQ   ++ ++   FH 
Sbjct: 1211 KAALYGMEWCEQHGYKKVELEVNSELLYNWIKNTTKIPWRYEDLVQQIQQISMKMEQFHC 1270

Query: 1411 SYCFREINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTKPTK 1581
             + +RE N  AD L+  S+  E +  F +   L  +++G   L+K  + +F+ +  K
Sbjct: 1271 HHIYREANNTADLLSKWSNNCEIVQHFYTTRQLEGAIKGSYILEKMGVQNFRRRKLK 1327



 Score = 86.3 bits (212), Expect(2) = 4e-51
 Identities = 42/124 (33%), Positives = 71/124 (57%)
 Frame = +2

Query: 506  KRAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTI 685
            KR  +  ++ IW+K + FK+AF  WR++  +LPT++ + ++G +I+    CC  +  + I
Sbjct: 971  KRIIDNISTIIWHKHLPFKIAFFIWRALKGKLPTNEFLQRIGSDISD-YSCCYRKGKDDI 1029

Query: 686  LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
                NH+   GNFA  +W+  A  LG+   N TL+   L+W N +  N +   ++  LP+
Sbjct: 1030 ----NHILINGNFAKYIWKIHAATLGIIPVNTTLRAQLLHWRNQQVNNEVHKLLIHILPN 1085

Query: 866  IICW 877
            IICW
Sbjct: 1086 IICW 1089



 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 32/114 (28%), Positives = 59/114 (51%)
 Frame = +2

Query: 5    LVLLTTPREL*NSLKKSVLGSFGLEN*NGGKHH*IAWVNLSYPYEEGGANFKNISDIFLA 184
            L  ++ P+   N +KK +   F   + +G  +H  +W N++YP  EGG   + + D+  A
Sbjct: 755  LAAISPPKTTLNCIKKLIADFFWGIDKDGKTYHWSSWENMAYPTSEGGIGVRLLEDVCTA 814

Query: 185  FKAKQW*NLRTNYSL*GEFMRARYLLNQHSSKVQWTKGNSQGWKTICEAKSHTE 346
            F+ KQW + RT  SL  +F++A+Y    +    ++  G+S  W+ +   +   E
Sbjct: 815  FQYKQWWDFRTKNSLWSQFLQAKYCQRANPVAKKYDTGDSLIWRYLTRNRLKVE 868


>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 468

 Score =  128 bits (321), Expect(2) = 6e-50
 Identities = 77/237 (32%), Positives = 116/237 (48%), Gaps = 3/237 (1%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W+ RCA K+     ++ RVK  I     ++ K  F  +    NW +L    E  +    
Sbjct: 226  LWKNRCACKYGGKGTNISRVKYAIYKDTFKMLKNSFPSINWPANWTTLILTSEKCVHNIK 285

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCL--QGMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEV 1233
            +  + W KPPD+ IK+NTDGS L  +G    GGI+R   G  I AFS  LG GS+N AE+
Sbjct: 286  VYKVTWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEI 345

Query: 1234 ATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHK-LIEDHGFHI 1410
               L+ L W     +  +  E DS L+ + I+     PW + + ++   + +I+   F  
Sbjct: 346  EAALFGLTWAFELGFKNILLELDSQLVVQWISNKIAPPWNLTNQLERLQQIIIQTQNFRC 405

Query: 1411 SYCFREINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTKPTK 1581
             + FRE N  AD L+  SH     HV+   + LP+       +D   +PSF+ K TK
Sbjct: 406  CHIFREANWVADALSKHSHNNTAPHVYVHSNQLPKEAHAYYQMDLMDMPSFRRKKTK 462



 Score = 98.6 bits (244), Expect(2) = 6e-50
 Identities = 47/124 (37%), Positives = 69/124 (55%)
 Frame = +2

Query: 506 KRAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTI 685
           K+A N+  S +W+K I FK +FL WR++  +LPT++K++  GI   P C CC        
Sbjct: 105 KKAKNFFNSALWHKFIPFKTSFLLWRTLKGKLPTNEKLSNFGIEPLP-CFCCFDRAG--- 160

Query: 686 LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
           ++ + H+F  G FAT VW   A   G++  ++TL  L   WW T+  N     +LQA P 
Sbjct: 161 MDTIEHIFNSGPFATIVWNFFAATAGIQADHSTLPALIKQWWTTKPNNAGHKLLLQATPI 220

Query: 866 IICW 877
            ICW
Sbjct: 221 FICW 224


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score =  130 bits (327), Expect(2) = 2e-48
 Identities = 77/207 (37%), Positives = 108/207 (52%), Gaps = 3/207 (1%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W+ RCA K+     S++RV+  I    MQ+ K  F  +  + +W  L +I E   Q   
Sbjct: 1019 LWKNRCAVKYGNKSSSIHRVQYGIFKDVMQVIKIVFPSIPWQSSWNKLINIVEHCKQQYK 1078

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCLQ--GMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEV 1233
            I ++ W KP   T KLNTDGS LQ  G    GGI+R + G  ++AFS+  G G++N+AE+
Sbjct: 1079 IVLVSWNKPGLGTYKLNTDGSALQNSGKIGGGGILRDHQGKIVYAFSLPFGFGTNNIAEI 1138

Query: 1234 ATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKLIED-HGFHI 1410
               LY L+WCD + Y  V  E DS LL   I      PW   DL+Q   ++      F  
Sbjct: 1139 KAALYGLEWCDQHGYKRVELEVDSQLLCNWIKNKTNIPWIYEDLIQQIKQITRKIEQFQC 1198

Query: 1411 SYCFREINKRADKLAYLSHGLEGIHVF 1491
             + +RE N  AD L+  SH LE +  F
Sbjct: 1199 HHIYREANITADLLSKWSHSLELVQHF 1225



 Score = 90.9 bits (224), Expect(2) = 2e-48
 Identities = 43/124 (34%), Positives = 72/124 (58%)
 Frame = +2

Query: 506  KRAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTI 685
            KR  +   + IW+K + FK+AF  WR++  +LPT++ + + G  I+  C+CC ++  + I
Sbjct: 899  KRPIDTINTIIWHKHLPFKIAFFIWRALKGKLPTNELLQRFGSAISK-CYCCYSKGKDDI 957

Query: 686  LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
                NH+   GNFA  +W+  A  LGV  +N TL+   L+W N +  N +   ++  LP+
Sbjct: 958  ----NHILINGNFAKHIWKIHAAILGVVPANTTLRDQLLHWRNQQVNNEVHKLLIHILPN 1013

Query: 866  IICW 877
            +ICW
Sbjct: 1014 VICW 1017



 Score = 65.1 bits (157), Expect = 8e-08
 Identities = 33/116 (28%), Positives = 60/116 (51%)
 Frame = +2

Query: 5    LVLLTTPREL*NSLKKSVLGSFGLEN*NGGKHH*IAWVNLSYPYEEGGANFKNISDIFLA 184
            L  ++ P+   N +KK +   F   + +G K+H  +W N++YP  EGG   + + D+  A
Sbjct: 683  LAAISPPKTTLNCIKKLIADFFWGIDKDGKKYHWSSWENMAYPTSEGGIGVRLLEDVCTA 742

Query: 185  FKAKQW*NLRTNYSL*GEFMRARYLLNQHSSKVQWTKGNSQGWKTICEAKSHTERL 352
            F+  QW + RT  SL  +F++A+Y    +    ++  G+S  W+ +   +   E L
Sbjct: 743  FQYMQWWDFRTKNSLWSQFLKAKYCQRANPLAKKYDSGDSLVWRYLTRNRLKVESL 798


>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 655

 Score =  127 bits (320), Expect(2) = 7e-48
 Identities = 69/166 (41%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W+ RCA K+   + +V+RVK  I    MQI K  F  +  + NW +L +I E   Q   
Sbjct: 473  LWKNRCAVKYGKKRSNVHRVKYGIFKEVMQIIKLVFPSIPWQANWNNLVNIIENCSQQYK 532

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCLQ--GMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEV 1233
            I ++ W KP   T KLNTDGS +Q  G    GGI+R + G  ++AFSI  G G++N AE+
Sbjct: 533  IVLVSWNKPAFGTYKLNTDGSAIQNSGKTGGGGILRDFQGKIVYAFSIPFGVGTNNFAEI 592

Query: 1234 ATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ 1371
               LY ++WC+ + Y  V  E DS LL   I    K PWR  DLVQ
Sbjct: 593  KAALYGMQWCEQHGYKKVELEVDSELLFNWIKNTTKIPWRYEDLVQ 638



 Score = 92.0 bits (227), Expect(2) = 7e-48
 Identities = 43/124 (34%), Positives = 71/124 (57%)
 Frame = +2

Query: 506 KRAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTI 685
           KR  +  ++ IWNK + FK+AF  WR++  +LPT++ + ++G NI+  C CC  +  + I
Sbjct: 353 KRIIDNISTIIWNKHLPFKIAFFIWRALKGKLPTNEFLQRIGSNISD-CSCCYRKGKDDI 411

Query: 686 LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
               NH+   GNFA  +W+  A  LG+   N  L+   L+W N +  N +   ++  LP+
Sbjct: 412 ----NHILINGNFAKYIWKIHAATLGIIPVNTNLRAQLLHWRNQKVNNEVHKLLIHILPN 467

Query: 866 IICW 877
           +ICW
Sbjct: 468 LICW 471



 Score = 65.5 bits (158), Expect = 6e-08
 Identities = 34/114 (29%), Positives = 60/114 (52%)
 Frame = +2

Query: 5   LVLLTTPREL*NSLKKSVLGSFGLEN*NGGKHH*IAWVNLSYPYEEGGANFKNISDIFLA 184
           L  ++ P+   N +KK +   F   + +G K+H  +W NL+YP  EGG   + + D+  A
Sbjct: 137 LSAISPPKTTLNCIKKLIADFFWGIDKDGKKYHWSSWENLAYPISEGGIGVRLLEDVCTA 196

Query: 185 FKAKQW*NLRTNYSL*GEFMRARYLLNQHSSKVQWTKGNSQGWKTICEAKSHTE 346
           F+ KQW + RT  SL  +F++A+Y    +    ++  G+S  W+ +   +   E
Sbjct: 197 FQYKQWWDFRTKKSLWSQFLQAKYCQRANPVAKKYDTGDSLIWRYLTRNRLKVE 250


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 1010

 Score =  119 bits (297), Expect(3) = 4e-47
 Identities = 80/240 (33%), Positives = 119/240 (49%), Gaps = 6/240 (2%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W+ RCA K  + + S  RV+  I    MQ     F  +  + N   L ++ E   Q   
Sbjct: 768  LWKNRCAVKHGSKQCSTQRVQYAIFKDTMQAVMVAFPNISRQNNLDMLINLAENCQQQVK 827

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCLQGMCE--WGGIVRGYYGNTIFAFSINLGPGSSNMAEV 1233
            +T + W KP     KLNTDGS +  + +   GGI+R + G  I+AF+I  G G++N AE+
Sbjct: 828  VTKVMWEKPSLGIFKLNTDGSAIHNINKIGGGGILRDHNGKLIYAFAIPFGIGTNNFAEM 887

Query: 1234 ATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWR----IYDLVQ*AHKLIEDHG 1401
               LY L WC+ + Y  +  E DS LL+K I+     PWR    IY +    +K+     
Sbjct: 888  KAALYGLSWCEQHGYKRIILEVDSELLSKWIDNSINIPWRCQPTIYQIQDIVNKM---EY 944

Query: 1402 FHISYCFREINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTKPTK 1581
            F   + FRE N  AD LA  SH  + +  F +   L  ++RG   L+K  + SF+ +  K
Sbjct: 945  FQCQHIFREANGTADLLAKWSHQQDIVQHFYTQQQLIGTIRGNYLLEKMGVQSFRRRKLK 1004



 Score = 89.0 bits (219), Expect(3) = 4e-47
 Identities = 41/114 (35%), Positives = 65/114 (57%)
 Frame = +2

Query: 536 IWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTILEILNHLFCQ 715
           IW+K+I FK++F  W+++ N+LPT+D +   G++    C+CC  +  + IL    H+   
Sbjct: 658 IWHKNIPFKVSFFIWKALRNKLPTNDSLMNFGMD-EQECYCCFRKGKDDIL----HILIT 712

Query: 716 GNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPSIICW 877
           GNFA  +W+  A  LGV   +  L+ L L+W N    N +   + Q LP+ ICW
Sbjct: 713 GNFAKYIWKIHATRLGVHQDHANLRSLLLHWRNIPVHNQVQKLLYQILPNFICW 766



 Score = 30.0 bits (66), Expect(3) = 4e-47
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = +3

Query: 345 KDWDALQCQPPNDLKDKICNLDIVLDNHTNDKAI*TESTIGQLSVHSA*NIIRQKEL 515
           K+    Q  PP  L   I +  I   N  +D AI T    G+ ++HSA NIIR+K +
Sbjct: 595 KERQVRQLVPPL-LVPNILDTVIQAKNEKSDYAIWTLEDKGKFTIHSAWNIIRKKNI 650


>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 955

 Score =  125 bits (313), Expect(2) = 3e-46
 Identities = 80/238 (33%), Positives = 118/238 (49%), Gaps = 4/238 (1%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W+  CA K+     S+ RV+  I    MQ  K  F  +  + +W  L ++ E   Q   
Sbjct: 713  LWKNMCAVKYGNKISSIQRVQYGIFKDVMQTIKIVFPNIPWQHSWYRLINLVEQCQQQLK 772

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCL--QGMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEV 1233
            + M+ W KP     KLNTDGS L   G    GGI+R Y G   +AFSI  G G++N+AE+
Sbjct: 773  VIMVSWRKPQFGIYKLNTDGSALPESGKIGGGGILRDYTGKLHYAFSIPFGLGTNNIAEM 832

Query: 1234 ATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKLIE--DHGFH 1407
                Y L WC+ + Y  +  E DS +L K I+     PWR    ++    +    DH F 
Sbjct: 833  EAARYGLDWCEQHGYKSILLEVDSEILQKWISNTIAIPWRYQQTIEHIQDIGRKMDH-FE 891

Query: 1408 ISYCFREINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTKPTK 1581
              + +RE+N  AD L+  SH L+ +  F +   L  S+RG   LDK    +F+ + T+
Sbjct: 892  CQHVYREVNGTADLLSKWSHKLDILQHFYTSQQLIGSIRGSYILDKLGTQNFRRRKTR 949



 Score = 89.4 bits (220), Expect(2) = 3e-46
 Identities = 41/124 (33%), Positives = 67/124 (54%)
 Frame = +2

Query: 506 KRAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTI 685
           K++ +   +++W+K I FK++F  WR++  +LPT D + K G N    C+CC  +  + I
Sbjct: 593 KKSTDIINNSVWHKHIPFKISFFIWRALRGKLPTYDYLQKFGSNATD-CYCCNRKGIDDI 651

Query: 686 LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
               NH+   GNFA  +W+  A   G+   N  L+ L L W N  + N +   ++  LP+
Sbjct: 652 ----NHILITGNFANYIWKYYAPTFGITQINIDLRSLLLQWTNLPSSNQVYKLLISILPN 707

Query: 866 IICW 877
            ICW
Sbjct: 708 FICW 711



 Score = 65.5 bits (158), Expect = 6e-08
 Identities = 32/104 (30%), Positives = 55/104 (52%)
 Frame = +2

Query: 5   LVLLTTPREL*NSLKKSVLGSFGLEN*NGGKHH*IAWVNLSYPYEEGGANFKNISDIFLA 184
           L  ++ P+     +K  +   F   + +G K+H  +W  L+YP  EGG   +N+ D+ +A
Sbjct: 377 LAAVSPPKTTLKYIKNVIADFFWGMDKDGKKYHWASWETLAYPTNEGGIGVRNLEDVCIA 436

Query: 185 FKAKQW*NLRTNYSL*GEFMRARYLLNQHSSKVQWTKGNSQGWK 316
           F+ KQW   RT  SL  +F++A+Y    +    ++  GNS  W+
Sbjct: 437 FQYKQWWEFRTKNSLWSKFLKAKYCKRANPVAKKYDTGNSLVWR 480


>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  110 bits (275), Expect(2) = 1e-44
 Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 3/237 (1%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W+ RCA K+     ++ RVK  +     ++ K  F  ++   +W +L H  E       
Sbjct: 533  LWKNRCACKYGGKATNISRVKYAVYKDNFKMMKNAFPHIQWPAHWTALIHTSEKCKHDTK 592

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCL--QGMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEV 1233
            +  + W +PP++ IK+NTDGS L   G    GGI+R   G  + AF+ +LG GS+N AE 
Sbjct: 593  VCQVVWNRPPEEWIKINTDGSALTNPGNIGAGGIIRNKEGKLVMAFATSLGEGSNNKAET 652

Query: 1234 ATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKLI-EDHGFHI 1410
               L  L       Y  +  E DS L+ + I++     W + + ++    LI +   F  
Sbjct: 653  EAALIGLVHALELGYRNIIMELDSQLIVQWISKKSVHHWSVSNQIERLQYLIMQTQNFKC 712

Query: 1411 SYCFREINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTKPTK 1581
             + FRE N  AD L+  SH +    ++   + LP+       +D  ++PSF+ + TK
Sbjct: 713  QHIFREANWVADALSKHSHHITSPQLYFDSNQLPKEANAYYRMDLLNMPSFRRRKTK 769



 Score = 98.6 bits (244), Expect(2) = 1e-44
 Identities = 46/124 (37%), Positives = 69/124 (55%)
 Frame = +2

Query: 506 KRAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTI 685
           K+A N   S +W+  I FK +FL WR +  ++PT++K+   GI  +P C+CCV       
Sbjct: 412 KKAKNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTNFGIEPSP-CYCCVDRAG--- 467

Query: 686 LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
           ++ +NH+F  GNFA RVW+  A   G++    TL+     WW  ++ N     +LQA P 
Sbjct: 468 MDSINHIFNTGNFAGRVWKSFAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQLLLQATPI 527

Query: 866 IICW 877
            ICW
Sbjct: 528 FICW 531



 Score = 79.7 bits (195), Expect = 3e-12
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = +2

Query: 5   LVLLTTPREL*NSLKKSVLGSF-GLEN*NGGKHH*IAWVNLSYPYEEGGANFKNISDIFL 181
           L  +T P  +   ++  +   F G +N N  K+H  +W NLSYPYEEGG   +N++D+  
Sbjct: 196 LSAVTPPNTIIKQIQMLIADFFWGWQN-NSKKYHWSSWKNLSYPYEEGGVGMRNLNDVCK 254

Query: 182 AFKAKQW*NLRTNYSL*GEFMRARYLLNQHSSKVQWTKGNSQGWKTICEAKSHTER 349
           +F+ KQW   RT  +L G+F+RA+Y    +    +W  G S  WK +   +   E+
Sbjct: 255 SFQFKQWWTFRTKQTLWGDFLRAKYCQRSNPVSKKWDTGQSLTWKHMLAIRQQVEQ 310


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 668

 Score =  120 bits (300), Expect(2) = 1e-44
 Identities = 74/237 (31%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W+ RCA K+     ++ RVK  I     ++ K  F  +    NW +L    E       
Sbjct: 429  LWKNRCACKYGGKSTNISRVKYAIYKDTFKMLKSAFPCINWPGNWAALIQTAERCKHEIK 488

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCL--QGMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEV 1233
            + M  W +PP++ IK+NTDGS L   G C  GGI+R   G  + AF+  LG G++N AE 
Sbjct: 489  VCMTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKIVLAFATPLGDGTNNKAEA 548

Query: 1234 ATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKLI-EDHGFHI 1410
               L+ L W     +  +  E DS L+ + I++     W + + ++   +LI +   F  
Sbjct: 549  EAALFGLSWALELGHRNILIELDSQLVVQWISKKEPPHWNVINQIERIQQLIMQTQNFKC 608

Query: 1411 SYCFREINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTKPTK 1581
            ++ FRE N  AD L+  SH +    V+ S S LP+  +    +D  ++P+F+ K TK
Sbjct: 609  NHIFREANWVADALSKHSHTIATPQVYFSNSQLPREAQAYYQMDLQNMPNFRRKKTK 665



 Score = 89.0 bits (219), Expect(2) = 1e-44
 Identities = 43/124 (34%), Positives = 67/124 (54%)
 Frame = +2

Query: 506 KRAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTI 685
           K+A +   S +W+  I FK +FL WR +  +LPT++K++  GI  +  C CCV     T 
Sbjct: 308 KKAKHKFNSLLWHNFIPFKSSFLLWRVLKGKLPTNEKLSNFGIEPS-SCFCCVDR---TG 363

Query: 686 LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
           ++ + H F  G+FATRVWR      G++   ++++     WW  R  N     +LQA+P 
Sbjct: 364 MDSIEHTFNSGSFATRVWRAFTTTAGLQEDQSSVQARLRQWWTARLRNASHQLLLQAMPI 423

Query: 866 IICW 877
            I W
Sbjct: 424 FIVW 427



 Score = 78.6 bits (192), Expect = 7e-12
 Identities = 37/115 (32%), Positives = 63/115 (54%)
 Frame = +2

Query: 5   LVLLTTPREL*NSLKKSVLGSFGLEN*NGGKHH*IAWVNLSYPYEEGGANFKNISDIFLA 184
           L  +T P  +   +++ +   F   + N  K+H  +W NLSYPY+EGG   +N+ D+  +
Sbjct: 106 LAAVTPPNSIILQIQRIIADFFWGWHNNRKKYHWSSWKNLSYPYDEGGIGMRNLHDVCRS 165

Query: 185 FKAKQW*NLRTNYSL*GEFMRARYLLNQHSSKVQWTKGNSQGWKTICEAKSHTER 349
           F+ KQW   RT  +L G+F++A+Y    +    +W  G+S  WK +   + H E+
Sbjct: 166 FQFKQWWIFRTKQTLWGDFLKAKYCQRSNPMSKKWDTGDSLTWKHMLITRQHMEQ 220


>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score =  187 bits (474), Expect = 1e-44
 Identities = 90/215 (41%), Positives = 137/215 (63%)
 Frame = +1

Query: 922  PSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RCITMIKWIKPPDKTI 1101
            P+ Y    N + T ++  +  F  +++E +W +++ IF+  I  + +  + WIKPP    
Sbjct: 942  PTCYCCTNNNIPTTLESAEHIF-MIKVENSWENINQIFDVSINHKNVIRVNWIKPPTMFA 1000

Query: 1102 KLNTDGSCLQGMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEVATLLYDLKWCDNNDYS 1281
            KLNTDGSC+ G C  GGI+R   G  I AF+I LG G+S+ AE  ++L+ ++ C     +
Sbjct: 1001 KLNTDGSCVNGRCGGGGILRNALGQVIMAFTIKLGEGTSSWAEAMSMLHGMQLCIQRGVN 1060

Query: 1282 MVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKLIEDHGFHISYCFREINKRADKLAYL 1461
            M+ GETDS+LLAK I  +W  PWR+Y  V+   K++E+HGF I++C RE N+ ADKLA +
Sbjct: 1061 MIIGETDSILLAKAITENWSIPWRMYIPVKKIQKMVEEHGFIINHCLREANQPADKLASI 1120

Query: 1462 SHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFK 1566
            S   +  HVF S + LP  V+GL+NLD+ +LP+F+
Sbjct: 1121 SLSTDVNHVFKSYANLPSLVKGLVNLDRMNLPTFR 1155



 Score = 74.3 bits (181), Expect(2) = 1e-16
 Identities = 41/105 (39%), Positives = 54/105 (51%)
 Frame = +2

Query: 530  SNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTILEILNHLF 709
            + IW+K I FKM+FL W++I NRLPT  K  +LGI ++P C+CC   N  T LE   H+F
Sbjct: 904  NKIWHKDIPFKMSFLTWKAIINRLPTGAKFKRLGIPLSPTCYCCTNNNIPTTLESAEHIF 963

Query: 710  CQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSF 844
                     W  I     V I  N   ++ +NW     I P T F
Sbjct: 964  MIK--VENSWENINQIFDVSI--NHKNVIRVNW-----IKPPTMF 999



 Score = 40.8 bits (94), Expect(2) = 1e-16
 Identities = 27/72 (37%), Positives = 36/72 (50%)
 Frame = +3

Query: 294  KEILKVGKQFVKLKVILKDWDALQCQPPNDLKDKICNLDIVLDNHTNDKAI*TESTIGQL 473
            KEIL  GK          +W  LQ Q PN +K  I  L + L+N   DK + + ++ G  
Sbjct: 834  KEILGNGKW---------NWSILQNQLPNQIKVMITGLGLNLNNEEQDKPVWSPTSAGNF 884

Query: 474  SVHSA*NIIRQK 509
            +V SA NI R K
Sbjct: 885  TVTSAWNICRHK 896


>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  105 bits (261), Expect(2) = 4e-43
 Identities = 65/237 (27%), Positives = 113/237 (47%), Gaps = 3/237 (1%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W+ RCA K+     ++ RVK  +     ++ K  F  ++   +W +L H  E       
Sbjct: 533  LWKNRCACKYGGKATNISRVKYVVYKDNFKMMKNAFPHIQWPAHWTALIHTSEKCKHDTK 592

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCL--QGMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEV 1233
            +  + W +PP++ IK+NTDGS L   G    GGI+R   G  + AF+ +LG G+ N A+ 
Sbjct: 593  VCQVVWNRPPEEWIKINTDGSALTNPGKIGAGGIIRNKEGKLVMAFATSLGEGTKNKAKT 652

Query: 1234 ATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKLI-EDHGFHI 1410
               L  L       Y  +  E DS L+ + I++     W + + ++    LI +   F  
Sbjct: 653  EAALIGLVHALELGYRNIIMELDSQLIVQWISKKSVHHWSVSNQIERLQYLIMQTQNFKC 712

Query: 1411 SYCFREINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTKPTK 1581
             + F+E N  AD L+  +H +    ++   + LP+       +D  ++PSF+ + TK
Sbjct: 713  QHIFKEANWVADALSKHNHHITSPQLYFDSNQLPKEANAYYRMDLLNMPSFRRRKTK 769



 Score = 98.6 bits (244), Expect(2) = 4e-43
 Identities = 46/124 (37%), Positives = 69/124 (55%)
 Frame = +2

Query: 506 KRAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTI 685
           K+A N   S +W+  I FK +FL WR +  ++PT++K+   GI  +P C+CCV       
Sbjct: 412 KKAKNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTNFGIEPSP-CYCCVDRAG--- 467

Query: 686 LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
           ++ +NH+F  GNFA RVW+  A   G++    TL+     WW  ++ N     +LQA P 
Sbjct: 468 MDSINHIFNTGNFAGRVWKSFAAGAGLQEDQQTLQARLKQWWTAKSCNAGHQLLLQATPI 527

Query: 866 IICW 877
            ICW
Sbjct: 528 FICW 531



 Score = 79.0 bits (193), Expect = 5e-12
 Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
 Frame = +2

Query: 5   LVLLTTPREL*NSLKKSVLGSF-GLEN*NGGKHH*IAWVNLSYPYEEGGANFKNISDIFL 181
           L ++T P  +   ++  +   F G +N N  K+H  +W NLSYPYEEGG   +N++D+  
Sbjct: 196 LSVVTPPNTIIKQIQMFIADFFWGWQN-NSKKYHWSSWKNLSYPYEEGGVGMRNLNDVCK 254

Query: 182 AFKAKQW*NLRTNYSL*GEFMRARYLLNQHSSKVQWTKGNSQGWKTICEAKSHTER 349
           +F+ KQW   +T  +L G+F+RA+Y    +    +W  G S  WK +   +   E+
Sbjct: 255 SFQFKQWWTFQTKQTLWGDFLRAKYCQRSNPVSKKWDTGQSLTWKHMLAIRQQVEQ 310


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score =  111 bits (278), Expect(2) = 5e-41
 Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
 Frame = +1

Query: 853  SSSIHHLLGIWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHI 1032
            S+ I     +W+ RCA K+   + ++ RVK  ++    ++    F  +     W    ++
Sbjct: 996  STPIFICWNLWKNRCAVKYGGKQSNIARVKHLVILDNFKLLHTVFPYISWPLRWNKFCNV 1055

Query: 1033 FETDIQ*RCITMIKWIKPPDKTIKLNTDGSCLQ--GMCEWGGIVRGYYGNTIFAFSINLG 1206
             E   Q   +T ++W KPP + +KLNTDGS L   G    G ++R + G  I A+S  LG
Sbjct: 1056 IENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRNHLGEIILAYSTPLG 1115

Query: 1207 PGSSNMAEVATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKL 1386
             G++N AEV   ++ + WC +  Y+ V  E DS LL      +   PW I   +Q  H+L
Sbjct: 1116 TGTNNQAEVEAAIFGIAWCIHMKYNQVILEVDSQLLVDWFKNNKLIPWNISSQMQQLHQL 1175

Query: 1387 IE--DHGFHISYCFREINKRADKLAYLSH 1467
                DH F   + FRE N  AD L+  SH
Sbjct: 1176 ATQLDH-FKCIHTFREANFVADVLSKHSH 1203



 Score = 85.1 bits (209), Expect(2) = 5e-41
 Identities = 42/113 (37%), Positives = 60/113 (53%)
 Frame = +2

Query: 539  WNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTILEILNHLFCQG 718
            W+  I FK +FL WR+I  +LPT++K+   GI  +  CHCC +   +TI   LN     G
Sbjct: 896  WHPKIPFKCSFLLWRAIRGKLPTNEKLLSFGIEPSD-CHCCHSPGIDTIEHTLN----SG 950

Query: 719  NFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPSIICW 877
            +FA  VW+  A  LG+R     L+ + + WW+    N     IL + P  ICW
Sbjct: 951  DFAKNVWKYFAISLGIRTDFLPLRNMIMRWWSAPHNNEAHKLILHSTPIFICW 1003



 Score = 97.1 bits (240), Expect(2) = 3e-29
 Identities = 47/124 (37%), Positives = 68/124 (54%)
 Frame = +2

Query: 506 KRAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTI 685
           KR      + IW+KSI FK +FL WR++  +LPT++K+   G N    C CC   +    
Sbjct: 588 KRTKTIFNTFIWHKSIPFKTSFLLWRTLRGKLPTNEKLISFG-NEPANCFCCCNRSG--- 643

Query: 686 LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
           L+ + H F +G FAT +W+  A   G+   +N+L  L + WW+T+  N     ILQA P 
Sbjct: 644 LDTIEHTFNKGQFATYLWKSFAAAAGIITYHNSLPQLIMQWWSTKHNNAAYRLILQATPI 703

Query: 866 IICW 877
            ICW
Sbjct: 704 FICW 707



 Score = 60.5 bits (145), Expect(2) = 3e-29
 Identities = 32/95 (33%), Positives = 50/95 (52%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W+ RCA+K+   + ++ RVK  I     ++    F +++   NW  L  + E       
Sbjct: 709  LWKNRCASKYGGKQSNISRVKYAIYKDNYKLMTTTFPQIKWPSNWMELLQLGERCTHDTK 768

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCLQGMCEWGGIVRG 1164
            +TM+KWIKP  + +K+NTDGS L   C  G I  G
Sbjct: 769  VTMVKWIKPKKQWVKINTDGSAL---CNPGRIGAG 800



 Score = 74.7 bits (182), Expect = 1e-10
 Identities = 32/84 (38%), Positives = 50/84 (59%)
 Frame = +2

Query: 95  KHH*IAWVNLSYPYEEGGANFKNISDIFLAFKAKQW*NLRTNYSL*GEFMRARYLLNQHS 274
           K+H  +W NLS+PYEEGG   +N+ D+ +AF+ KQW   R+  +L G+F++A+Y    + 
Sbjct: 402 KYHWASWKNLSFPYEEGGIGMRNLKDVCIAFQYKQWWCFRSKQTLWGDFLKAKYCQRSNP 461

Query: 275 SKVQWTKGNSQGWKTICEAKSHTE 346
              +W  G+S  WK +   K   E
Sbjct: 462 ISKKWDTGDSLTWKHLMHNKHKVE 485


>ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 927

 Score =  125 bits (315), Expect(2) = 5e-39
 Identities = 75/230 (32%), Positives = 118/230 (51%), Gaps = 3/230 (1%)
 Frame = +1

Query: 892  RCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RCITMI 1071
            +CA K+   + S+ +VK  I    MQ+ K  F  +  + NW SL +I E   Q   + M+
Sbjct: 696  QCAVKYGGKQSSIQKVKYGISKETMQVIKLTFPNIPWQSNWESLINIVEQCKQLYKVNMV 755

Query: 1072 KWIKPPDKTIKLNTDGSCL--QGMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEVATLL 1245
            +WIKP     KLNT+GS L   G    GG++R + G  I AFS+ LG G+ N AE+    
Sbjct: 756  RWIKPKQHVYKLNTNGSALAESGKIGGGGVLRHHQGKLICAFSVPLGVGTYNFAELKAAT 815

Query: 1246 YDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRI-YDLVQ*AHKLIEDHGFHISYCF 1422
            + + WC+ + Y  +  E DS ++ + IN   K PWR  +++ Q      +   FH  + +
Sbjct: 816  FGIDWCEQHGYKSIELEVDSEIICQWINNTIKPPWRCQHNVQQLLQTTSKFQYFHCKHIY 875

Query: 1423 REINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTK 1572
            RE N  AD LA  SH ++    F +   L  ++R    L+K  + +F+ +
Sbjct: 876  REANNTADLLAKWSHTMDIPQHFYTPQQLKGTIRESYMLEKMDIHNFRRR 925



 Score = 64.3 bits (155), Expect(2) = 5e-39
 Identities = 29/85 (34%), Positives = 50/85 (58%)
 Frame = +2

Query: 536 IWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTILEILNHLFCQ 715
           +WNK I FK++F  WR++  ++PT++ + K G      C+CC  +  + I    +H+   
Sbjct: 612 VWNKQIPFKVSFFIWRALRGKIPTNESLLKFG-REGVDCYCCYKKWKDEI----SHILVT 666

Query: 716 GNFATRVWREIANPLGVRISNNTLK 790
           GNFA  +W+  A+ +GV  +N TL+
Sbjct: 667 GNFAKHIWKYHASSVGVIQANTTLR 691


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 94.4 bits (233), Expect(2) = 2e-37
 Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 1/235 (0%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQ-FGKVRIEENWRSLHHIFETDIQ*R 1056
            IW+ RCA K+   K   YR   N ++  ++++ +  F    I  +WR L +  E+     
Sbjct: 681  IWKRRCACKYGDQKKMWYRTMENHVWWNLKMSLRMTFPSFEIGNSWRDLLNKVESLRPYP 740

Query: 1057 CITMIKWIKPPDKTIKLNTDGSCLQGMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEVA 1236
               ++ W  P    +K+NTDGS   G    G IVR +    I AFSI     S+N+AE  
Sbjct: 741  KWKIVHWNTPNINCVKINTDGSFSSGNAGLGWIVRDHTRRMIMAFSIPSSCSSNNLAEAL 800

Query: 1237 TLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKLIEDHGFHISY 1416
               + + WC    +   + E DS L+   +        +I  +V+   +++      +++
Sbjct: 801  AARFGILWCLQQGFHNCYLELDSKLVVDMVRNGQATNLKIKGVVEDIIQVVAKMNCEVNH 860

Query: 1417 CFREINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTKPTK 1581
            C+RE N+ AD LA  +      H+++    +P+   G   LDK  +PS + +  K
Sbjct: 861  CYREANQVADALAKHAVISNEAHMYHDWRDIPKLAVGSYQLDKMQMPSIRIRYDK 915



 Score = 90.1 bits (222), Expect(2) = 2e-37
 Identities = 44/124 (35%), Positives = 64/124 (51%)
 Frame = +2

Query: 509 RAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTIL 688
           R  N   + IW+    FKM+FL WR + N+LP  D V K   NI+  C CC     N   
Sbjct: 561 REKNDMRNKIWHGKFPFKMSFLTWRLVQNKLPFYDTVGKFVDNIDSNCVCC----KNMKT 616

Query: 689 EILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPSI 868
           E +NH+F   + A+ +W++    LG+    ++   L   WWN +T N I + I+  LP +
Sbjct: 617 ETINHVFLNSDVASYLWKKFGGTLGIDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPIL 676

Query: 869 ICWE 880
           I WE
Sbjct: 677 IFWE 680


>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 375

 Score = 95.9 bits (237), Expect(2) = 2e-36
 Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 2/236 (0%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W+ RCA K+     ++ RVK  +     ++ K  F +V    NW +L    E       
Sbjct: 158  LWKNRCACKYGGKSTNISRVKYAVYKDTFKMLKIAFPRVNWPGNWAALIQTAERCKHEIK 217

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCL--QGMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEV 1233
            + M  W +PP++ IK+NTDGS L   G C  GGI+R   G  + AF+  LG G++N AE 
Sbjct: 218  VCMTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKMVLAFATPLGDGTNNKAEA 277

Query: 1234 ATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKLIEDHGFHIS 1413
               L+ L W     +  +  E DS L+   I++  K P                      
Sbjct: 278  EAALFGLSWALELGHRNILIELDSQLVVHWISK--KEP---------------------- 313

Query: 1414 YCFREINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTKPTK 1581
                E N  AD L+  SH +    V+ + S LP+  +    +D  ++P+F+ K TK
Sbjct: 314  PIGMEANWVADALSKHSHTIATPQVYFNNSQLPREAQAYYQMDLQNMPNFRRKKTK 369



 Score = 85.9 bits (211), Expect(2) = 2e-36
 Identities = 41/124 (33%), Positives = 66/124 (53%)
 Frame = +2

Query: 506 KRAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTI 685
           K+A +   S +W+  I FK +FL WR +  +LPT++K++   I  +  C CCV     T 
Sbjct: 37  KKAKHKFNSLLWHNFIPFKSSFLLWRVLKGKLPTNEKLSNFSIEPS-SCFCCVDR---TR 92

Query: 686 LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
           ++ + H F  G+FAT+VWR      G++   ++++     WW  R  N     +LQA+P 
Sbjct: 93  MDSIEHTFNSGSFATKVWRAFTTTAGLQEDQSSVQARLRQWWTARPRNASHQLLLQAMPI 152

Query: 866 IICW 877
            I W
Sbjct: 153 FIVW 156


>ref|XP_006358679.1| PREDICTED: uncharacterized protein LOC102578253 [Solanum tuberosum]
          Length = 277

 Score =  157 bits (398), Expect = 9e-36
 Identities = 85/175 (48%), Positives = 106/175 (60%), Gaps = 2/175 (1%)
 Frame = +1

Query: 955  FTFMQITKKQFGKVRIEENWRS--LHHIFETDIQ*RCITMIKWIKPPDKTIKLNTDGSCL 1128
            FT   +T+KQ  K+ I   WRS  +    E +IQ      I WIKPP   +KLN+DGS  
Sbjct: 101  FTPPDVTQKQLNKINIGGTWRSASICKASEENIQQMTRISITWIKPPSLRVKLNSDGSFS 160

Query: 1129 QGMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEVATLLYDLKWCDNNDYSMVWGETDSL 1308
             G    GGI+R   G+ IFA+SI LG G+SN  E   LLY L+WC +    M  GETDSL
Sbjct: 161  NGQSGSGGIIRDQEGDFIFAYSIPLGNGTSNTVEAEALLYGLQWCASKGMEMAIGETDSL 220

Query: 1309 LLAKCINRDWKRPWRIYDLVQ*AHKLIEDHGFHISYCFREINKRADKLAYLSHGL 1473
            LL+K I R+WK PW+I + VQ   K+IEDH F I +CF+E NK AD LA L+  L
Sbjct: 221  LLSKTIKREWKSPWKISNQVQEIQKMIEDHKFSIVHCFKEANKPADALARLTSQL 275


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score =  101 bits (251), Expect(2) = 1e-35
 Identities = 65/234 (27%), Positives = 118/234 (50%), Gaps = 3/234 (1%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVR-IEENWRSLHHIFETDIQ*R 1056
            +W+ R A K ++S  S  R+   ++    ++ K QF  ++ +   W+++        +  
Sbjct: 635  LWKRRNALKHDSSI-SWERMVEMVIEVVRKMVKSQFPWIKNMRWTWQAIIQRLNQYKRKI 693

Query: 1057 CITMIKWIKPPDKTIKLNTDGSCL--QGMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAE 1230
             +  + W  P D  +K NTDG+C    G+  +G  +R   G+ I+A +  +G  ++  AE
Sbjct: 694  HVLRVTWKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDDKGDLIYAKAKGIGIATNMEAE 753

Query: 1231 VATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKLIEDHGFHI 1410
               +L  L+ C N     V  ETDSL L K I + W+ PW+I + V+   +++E     I
Sbjct: 754  TVAILTALRECSNRKMQKVIIETDSLSLKKIIQQTWRVPWKIAEKVEEIREIMEKIKAKI 813

Query: 1411 SYCFREINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTK 1572
            ++ FRE N  AD LA ++   +  H ++    LP   R ++N+DK  +P+ + +
Sbjct: 814  THIFREGNSLADSLANIAIESQAEHQYSCFQELPLKERRILNIDKAQIPTLRIR 867



 Score = 77.4 bits (189), Expect(2) = 1e-35
 Identities = 40/114 (35%), Positives = 57/114 (50%)
 Frame = +2

Query: 536 IWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTILEILNHLFCQ 715
           IWNK + FK+ F  WR    R+ TDD + K+ INI   C CC  +   T    + HLF  
Sbjct: 525 IWNKELPFKINFFMWRVWKRRIATDDNLKKMRINIVSRCWCCDRKKEET----MTHLFPT 580

Query: 716 GNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPSIICW 877
                ++WR  A+  G+ I    L+ L ++WW      P    I +A+P+II W
Sbjct: 581 APITYKLWRYFAHFAGINIDGMHLQQLIISWWK-HEATPKLQGIYKAIPAIIMW 633


>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
            lycopersicum]
          Length = 1531

 Score = 87.4 bits (215), Expect(2) = 2e-34
 Identities = 43/124 (34%), Positives = 67/124 (54%)
 Frame = +2

Query: 506  KRAPNYATSNIWNKSISFKMAFLAWRSIYNRLPTDDKVAKLGININPGCHCCVTENANTI 685
            K++ N   + IW+  I FK+AF  WR++  +LPT++ V + GI     C+CC  +  + I
Sbjct: 1268 KKSVNPINNIIWHNQIPFKVAFFIWRALRGKLPTNEGVHRFGIAAED-CYCCYQQGKDDI 1326

Query: 686  LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
                NH+    NFA  +W+  A  LGV      ++   ++W N  TIN +   I+Q LP+
Sbjct: 1327 ----NHILLTRNFANYIWKYHAAILGVTQLYTNIRSQLMHWRNQHTINEVHKLIMQILPN 1382

Query: 866  IICW 877
             ICW
Sbjct: 1383 YICW 1386



 Score = 87.4 bits (215), Expect(2) = 2e-34
 Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 5/147 (3%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDI---Q 1050
            +W+ RC  K+     S+ RV+  I    MQ+ +  +  +  +    SL+H+ +T     Q
Sbjct: 1388 LWKNRCGVKYGHKTSSIKRVQYGIFKDIMQVIRLVYPIIPWQS---SLYHLIKTAEHCHQ 1444

Query: 1051 *RCITMIKWIKPPDKTIKLNTDGSCLQ--GMCEWGGIVRGYYGNTIFAFSINLGPGSSNM 1224
               I M+ W KP +   KLNTDGS +Q  G    GGI+R + G  I+AFS+ L  G++NM
Sbjct: 1445 QYKIIMVSWQKPKEGIYKLNTDGSAIQDTGKIGGGGILRDHTGKIIYAFSVPLDFGTNNM 1504

Query: 1225 AEVATLLYDLKWCDNNDYSMVWGETDS 1305
            AE+    Y L+WC  + Y  +  E DS
Sbjct: 1505 AELKAAAYGLEWCQQHGYKRIALEVDS 1531



 Score = 65.1 bits (157), Expect = 8e-08
 Identities = 33/114 (28%), Positives = 60/114 (52%)
 Frame = +2

Query: 5    LVLLTTPREL*NSLKKSVLGSFGLEN*NGGKHH*IAWVNLSYPYEEGGANFKNISDIFLA 184
            L +++ P+   N +K+++   F   + +G K+H  +W  L+YP  EGG   + + DI  A
Sbjct: 1099 LAVMSPPKTTLNYIKRAIADFFWGVDKDGKKYHWASWDTLAYPTNEGGIGVRLLDDICKA 1158

Query: 185  FKAKQW*NLRTNYSL*GEFMRARYLLNQHSSKVQWTKGNSQGWKTICEAKSHTE 346
            F+ K W   RT  SL  +F++A+Y    +    ++  G+S  W+ +   +S  E
Sbjct: 1159 FQYKHWWEFRTKKSLWSQFLKAKYCQRANPVAKKYDTGDSLVWRYLTRNRSEME 1212


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 316

 Score =  126 bits (316), Expect(2) = 2e-34
 Identities = 71/237 (29%), Positives = 122/237 (51%), Gaps = 3/237 (1%)
 Frame = +1

Query: 880  IWRARCANKFEASKPSVYRVKANILFTFMQITKKQFGKVRIEENWRSLHHIFETDIQ*RC 1059
            +W+ RCA K+     ++ RVK  I     ++ +  F  ++   NW +L+   E       
Sbjct: 74   LWKNRCACKYGGKATNISRVKYAIYKDTFKMLQNTFPHIKWPSNWTALYQTSEKCKHDIK 133

Query: 1060 ITMIKWIKPPDKTIKLNTDGSCLQ--GMCEWGGIVRGYYGNTIFAFSINLGPGSSNMAEV 1233
            +  + W +PP++ IK+NTDGS +   G    GGI+R   G  + AF+ +LG GS+N AE+
Sbjct: 134  VCKVAWNRPPEEWIKINTDGSAINNPGKIGAGGILRDTEGRLVLAFATSLGEGSNNQAEM 193

Query: 1234 ATLLYDLKWCDNNDYSMVWGETDSLLLAKCINRDWKRPWRIYDLVQ*AHKLIE-DHGFHI 1410
                + L W  + DY  +  E DS ++ + I +     W + + ++   +LI+  H F  
Sbjct: 194  EAAQFGLSWAIDLDYRNIILEVDSQIVVQWITKKTTHHWSVSNQLEKIQQLIQRAHKFKC 253

Query: 1411 SYCFREINKRADKLAYLSHGLEGIHVFNSISTLPQSVRGLINLDK*SLPSFKTKPTK 1581
             + FRE N  AD L+  SHG  G  ++ + + +P+  +    +D  ++PSF+ K TK
Sbjct: 254  EHIFREANWTADSLSKHSHGTTGPQLYFNNNQMPKEAQAYYRMDLMNMPSFRRKKTK 310



 Score = 48.1 bits (113), Expect(2) = 2e-34
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = +2

Query: 686 LEILNHLFCQGNFATRVWREIANPLGVRISNNTLKILFLNWWNTRTINPITSFILQALPS 865
           L+ + H F  G FA RVW   +   G++    +L+     WW+    N     +LQA P+
Sbjct: 9   LDSIEHTFNSGQFAGRVWSFFSASAGLKEEQPSLQARLRQWWSATATNAGHQLLLQATPT 68

Query: 866 IICW 877
            +CW
Sbjct: 69  FVCW 72