BLASTX nr result

ID: Atropa21_contig00014947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00014947
         (607 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359442.1| PREDICTED: translocase of chloroplast 159, c...   218   1e-54
ref|XP_004247537.1| PREDICTED: translocase of chloroplast 159, c...   214   1e-53

>ref|XP_006359442.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like
           [Solanum tuberosum]
          Length = 1567

 Score =  218 bits (554), Expect = 1e-54
 Identities = 130/177 (73%), Positives = 137/177 (77%), Gaps = 1/177 (0%)
 Frame = -1

Query: 529 TSVASSNLKEAEEPTSVVEESAIASSNLKEAEEPTLVIEESAIPSDDAEKSNKAVVA-PS 353
           +++ASSNLKE EEPTSV+EESAIASSNLKEAEEPT VIEE AI SDDAEK NK VV  PS
Sbjct: 440 SAIASSNLKEVEEPTSVIEESAIASSNLKEAEEPTSVIEERAIHSDDAEKLNKVVVEQPS 499

Query: 352 ESLLVDEADGEKFTSEGDAVVDAIEVNVSGPGVAXXXXXXXXXXXXXXXESTTDDNVTSV 173
           ESLL  E DGEKFTSEGDAVVDAIEVNVSGPGVA               E TTD+NVTSV
Sbjct: 500 ESLLA-ETDGEKFTSEGDAVVDAIEVNVSGPGVAVVGDVEESKEVEEHIEGTTDENVTSV 558

Query: 172 NGVGETTQLIEEVANMTIDEEVDVQNSKPAVDDNVAAAESKPVTDNIVGAGSDGKLD 2
           N VGET QLIEEV NMT+D EVD Q+ KP VDD VAAAES PV DNIVGA   GKLD
Sbjct: 559 NDVGETRQLIEEVVNMTVD-EVDAQDPKPVVDDTVAAAESNPV-DNIVGA---GKLD 610


>ref|XP_004247537.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like
           [Solanum lycopersicum]
          Length = 1276

 Score =  214 bits (545), Expect = 1e-53
 Identities = 141/223 (63%), Positives = 147/223 (65%), Gaps = 21/223 (9%)
 Frame = -1

Query: 607 ELKEGEDKSAQXXXXXXXXXXXXEALTSVASSNLKEAEEPTSVVEESAIASSNLKE---- 440
           EL+ GED+S Q            EALTSVASSNLKEAEEPTSV+EESAIASSNLKE    
Sbjct: 230 ELQGGEDRSIQEEVKEIVEDEKNEALTSVASSNLKEAEEPTSVIEESAIASSNLKESEEP 289

Query: 439 ----------------AEEPTLVIEESAIPSDDAEKSNKAVVA-PSESLLVDEADGEKFT 311
                           AEEPT VIEE AI SDDAEK NK VV  PSESLL  E   +KFT
Sbjct: 290 TSVFEEVAIASSNLKEAEEPTSVIEERAIHSDDAEKLNKVVVEQPSESLLA-ETGSKKFT 348

Query: 310 SEGDAVVDAIEVNVSGPGVAXXXXXXXXXXXXXXXESTTDDNVTSVNGVGETTQLIEEVA 131
           SEGDAVVDAIEVNVSGPGVA               E T D+NVTSVN VGET QLIEEVA
Sbjct: 349 SEGDAVVDAIEVNVSGPGVAVVGDVDESKEVEEHIEGTHDENVTSVNDVGETRQLIEEVA 408

Query: 130 NMTIDEEVDVQNSKPAVDDNVAAAESKPVTDNIVGAGSDGKLD 2
            MT+D EVD QN KP VDD VA AESKPV DNIVGA   GKLD
Sbjct: 409 KMTVD-EVDAQNPKPVVDDTVATAESKPV-DNIVGA---GKLD 446


Top