BLASTX nr result
ID: Atropa21_contig00014874
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00014874
(514 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004231646.1| PREDICTED: putative pentatricopeptide repeat... 118 9e-25
ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat... 73 4e-11
emb|CBI27486.3| unnamed protein product [Vitis vinifera] 73 4e-11
ref|XP_006585057.1| PREDICTED: putative pentatricopeptide repeat... 62 8e-08
ref|XP_006585050.1| PREDICTED: putative pentatricopeptide repeat... 62 8e-08
ref|XP_002315826.2| pentatricopeptide repeat-containing family p... 61 2e-07
gb|ESW30837.1| hypothetical protein PHAVU_002G186700g [Phaseolus... 60 3e-07
ref|XP_006657060.1| PREDICTED: putative pentatricopeptide repeat... 60 4e-07
gb|EOY01160.1| Pentatricopeptide repeat-containing protein, puta... 59 7e-07
ref|XP_004298631.1| PREDICTED: putative pentatricopeptide repeat... 59 7e-07
dbj|BAD54485.1| putative fertility restorer homologue [Oryza sat... 58 1e-06
ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group] g... 58 1e-06
ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat... 57 2e-06
gb|EXC44867.1| hypothetical protein L484_000446 [Morus notabilis] 57 3e-06
gb|EXC19798.1| hypothetical protein L484_000854 [Morus notabilis] 57 3e-06
ref|XP_004967235.1| PREDICTED: putative pentatricopeptide repeat... 56 6e-06
ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [S... 55 7e-06
ref|NP_178323.3| putative pentatricopeptide repeat-containing pr... 55 7e-06
>ref|XP_004231646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Solanum lycopersicum]
Length = 759
Score = 118 bits (295), Expect = 9e-25
Identities = 59/62 (95%), Positives = 60/62 (96%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
AR FFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQ+EMMKRGLTTVTSD AVHNM
Sbjct: 698 ARSFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQNEMMKRGLTTVTSDVAVHNM 757
Query: 183 QT 188
QT
Sbjct: 758 QT 759
>ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 72.8 bits (177), Expect = 4e-11
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
AR DEMI KGV PDEVV+ CLI+KY +G ++E L LQ+EM KRG+ T SD AV ++
Sbjct: 694 ARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAVPSV 753
Query: 183 QT 188
QT
Sbjct: 754 QT 755
>emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 72.8 bits (177), Expect = 4e-11
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
AR DEMI KGV PDEVV+ CLI+KY +G ++E L LQ+EM KRG+ T SD AV ++
Sbjct: 448 ARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAVPSV 507
Query: 183 QT 188
QT
Sbjct: 508 QT 509
>ref|XP_006585057.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like isoform X8 [Glycine max]
Length = 702
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
A+ DEM+ KG+ PD+V+ CL+RKY E+G++ E LAL +M +RGL + T D V ++
Sbjct: 641 AKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSV 700
Query: 183 QT 188
T
Sbjct: 701 HT 702
>ref|XP_006585050.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like isoform X1 [Glycine max]
gi|571470572|ref|XP_006585051.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At2g02150-like isoform X2 [Glycine max]
gi|571470574|ref|XP_006585052.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At2g02150-like isoform X3 [Glycine max]
gi|571470576|ref|XP_006585053.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At2g02150-like isoform X4 [Glycine max]
gi|571470578|ref|XP_006585054.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At2g02150-like isoform X5 [Glycine max]
gi|571470580|ref|XP_006585055.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At2g02150-like isoform X6 [Glycine max]
gi|571470582|ref|XP_006585056.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At2g02150-like isoform X7 [Glycine max]
Length = 751
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
A+ DEM+ KG+ PD+V+ CL+RKY E+G++ E LAL +M +RGL + T D V ++
Sbjct: 690 AKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSV 749
Query: 183 QT 188
T
Sbjct: 750 HT 751
>ref|XP_002315826.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550329538|gb|EEF01997.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 620
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/62 (46%), Positives = 45/62 (72%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
AR F EMI KG+ PDE + + L+RK+ E+GN++E + LQ+E++++GL S+ AV N+
Sbjct: 548 ARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIHGNSNPAVPNI 607
Query: 183 QT 188
QT
Sbjct: 608 QT 609
>gb|ESW30837.1| hypothetical protein PHAVU_002G186700g [Phaseolus vulgaris]
Length = 751
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAV 173
A+ F +EM++KG+ PD+V+ L+RKY E+GN+ E L L +MM+RGL + T D V
Sbjct: 690 AKSFLNEMLDKGIIPDQVLCIYLLRKYHELGNINEALTLHDDMMRRGLISRTIDITV 746
>ref|XP_006657060.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Oryza brachyantha]
Length = 474
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSA 170
AR F EMI G+ PD+ V+SCLI KYQ++GNLEE + LQ+EM + + SD+A
Sbjct: 414 AREVFSEMIGHGIAPDKAVYSCLISKYQKLGNLEEAIDLQNEMERALPSCTDSDTA 469
>gb|EOY01160.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao] gi|508709264|gb|EOY01161.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao] gi|508709265|gb|EOY01162.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao] gi|508709266|gb|EOY01163.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao]
Length = 779
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
AR F DEMI K + PDE++ ++RKY E+G+++E + LQ+EM KRGL T AV ++
Sbjct: 718 ARKFLDEMIRKHILPDEILCIGVLRKYYELGHVDEAIELQNEMAKRGLITSPIHYAVPSV 777
Query: 183 Q 185
Q
Sbjct: 778 Q 778
>ref|XP_004298631.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Fragaria vesca subsp. vesca]
Length = 760
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGL 146
A+ F DEMI KG+ PDEV+ L+RKY E+GN++E + LQ+E+ RG+
Sbjct: 713 AKAFLDEMIRKGIIPDEVLIVSLVRKYYELGNVDEAIELQNELRNRGI 760
>dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSA 170
AR F EMI G+ PD V++CLI KYQ++GNLEE ++LQ EM + + SD+A
Sbjct: 627 AREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDSDTA 682
>ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa
Japonica Group] gi|125597608|gb|EAZ37388.1| hypothetical
protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSA 170
AR F EMI G+ PD V++CLI KYQ++GNLEE ++LQ EM + + SD+A
Sbjct: 627 AREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDSDTA 682
>ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/50 (52%), Positives = 38/50 (76%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTT 152
AR FF+EMIEKG+ P+EV+ CL+R+Y + G L+E + L++EM + GL T
Sbjct: 728 ARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLIT 777
>gb|EXC44867.1| hypothetical protein L484_000446 [Morus notabilis]
Length = 789
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGL 146
A+ + DEMI KG+ PDE++ CL+RKY E+GN+ E L+ E++KRGL
Sbjct: 728 AKTWLDEMIGKGILPDEILCVCLLRKYYELGNVVEADELRDELVKRGL 775
>gb|EXC19798.1| hypothetical protein L484_000854 [Morus notabilis]
Length = 789
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGL 146
A+ + DEMI KG+ PDE++ CL+RKY E+GN+ E L+ E++KRGL
Sbjct: 728 AKTWLDEMIGKGILPDEILCVCLLRKYYELGNVVEADELRDELVKRGL 775
>ref|XP_004967235.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Setaria italica]
Length = 701
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/56 (44%), Positives = 38/56 (67%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSA 170
AR EMI+ G+ PD+ V++CLI KYQ++GN+EE +LQ+EM ++ D+A
Sbjct: 641 AREVLSEMIQNGITPDKTVYNCLISKYQKLGNMEEASSLQNEMNSILISCTKDDTA 696
>ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein
SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSD 164
AR EMI G+ PD+ V++CLIRKYQ++GN+EE +LQ+E M+ L++ T D
Sbjct: 639 ARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNE-MESVLSSCTED 691
>ref|NP_178323.3| putative pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|218546751|sp|P0C894.1|PP143_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At2g02150 gi|330250459|gb|AEC05553.1| putative
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 761
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/60 (43%), Positives = 42/60 (70%)
Frame = +3
Query: 3 ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
AR F +EMI +G+ PDEV+ +++K+ E+G ++E + LQS +MK L T +D+A+ NM
Sbjct: 702 ARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALPNM 761