BLASTX nr result

ID: Atropa21_contig00014874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00014874
         (514 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231646.1| PREDICTED: putative pentatricopeptide repeat...   118   9e-25
ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat...    73   4e-11
emb|CBI27486.3| unnamed protein product [Vitis vinifera]               73   4e-11
ref|XP_006585057.1| PREDICTED: putative pentatricopeptide repeat...    62   8e-08
ref|XP_006585050.1| PREDICTED: putative pentatricopeptide repeat...    62   8e-08
ref|XP_002315826.2| pentatricopeptide repeat-containing family p...    61   2e-07
gb|ESW30837.1| hypothetical protein PHAVU_002G186700g [Phaseolus...    60   3e-07
ref|XP_006657060.1| PREDICTED: putative pentatricopeptide repeat...    60   4e-07
gb|EOY01160.1| Pentatricopeptide repeat-containing protein, puta...    59   7e-07
ref|XP_004298631.1| PREDICTED: putative pentatricopeptide repeat...    59   7e-07
dbj|BAD54485.1| putative fertility restorer homologue [Oryza sat...    58   1e-06
ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group] g...    58   1e-06
ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat...    57   2e-06
gb|EXC44867.1| hypothetical protein L484_000446 [Morus notabilis]      57   3e-06
gb|EXC19798.1| hypothetical protein L484_000854 [Morus notabilis]      57   3e-06
ref|XP_004967235.1| PREDICTED: putative pentatricopeptide repeat...    56   6e-06
ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [S...    55   7e-06
ref|NP_178323.3| putative pentatricopeptide repeat-containing pr...    55   7e-06

>ref|XP_004231646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Solanum lycopersicum]
          Length = 759

 Score =  118 bits (295), Expect = 9e-25
 Identities = 59/62 (95%), Positives = 60/62 (96%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
           AR FFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQ+EMMKRGLTTVTSD AVHNM
Sbjct: 698 ARSFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQNEMMKRGLTTVTSDVAVHNM 757

Query: 183 QT 188
           QT
Sbjct: 758 QT 759


>ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 36/62 (58%), Positives = 45/62 (72%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
           AR   DEMI KGV PDEVV+ CLI+KY  +G ++E L LQ+EM KRG+ T  SD AV ++
Sbjct: 694 ARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAVPSV 753

Query: 183 QT 188
           QT
Sbjct: 754 QT 755


>emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 36/62 (58%), Positives = 45/62 (72%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
           AR   DEMI KGV PDEVV+ CLI+KY  +G ++E L LQ+EM KRG+ T  SD AV ++
Sbjct: 448 ARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAVPSV 507

Query: 183 QT 188
           QT
Sbjct: 508 QT 509


>ref|XP_006585057.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like isoform X8 [Glycine max]
          Length = 702

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/62 (45%), Positives = 42/62 (67%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
           A+   DEM+ KG+ PD+V+  CL+RKY E+G++ E LAL  +M +RGL + T D  V ++
Sbjct: 641 AKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSV 700

Query: 183 QT 188
            T
Sbjct: 701 HT 702


>ref|XP_006585050.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like isoform X1 [Glycine max]
           gi|571470572|ref|XP_006585051.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At2g02150-like isoform X2 [Glycine max]
           gi|571470574|ref|XP_006585052.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At2g02150-like isoform X3 [Glycine max]
           gi|571470576|ref|XP_006585053.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At2g02150-like isoform X4 [Glycine max]
           gi|571470578|ref|XP_006585054.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At2g02150-like isoform X5 [Glycine max]
           gi|571470580|ref|XP_006585055.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At2g02150-like isoform X6 [Glycine max]
           gi|571470582|ref|XP_006585056.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At2g02150-like isoform X7 [Glycine max]
          Length = 751

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/62 (45%), Positives = 42/62 (67%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
           A+   DEM+ KG+ PD+V+  CL+RKY E+G++ E LAL  +M +RGL + T D  V ++
Sbjct: 690 AKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSV 749

Query: 183 QT 188
            T
Sbjct: 750 HT 751


>ref|XP_002315826.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550329538|gb|EEF01997.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 620

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/62 (46%), Positives = 45/62 (72%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
           AR F  EMI KG+ PDE + + L+RK+ E+GN++E + LQ+E++++GL    S+ AV N+
Sbjct: 548 ARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIHGNSNPAVPNI 607

Query: 183 QT 188
           QT
Sbjct: 608 QT 609


>gb|ESW30837.1| hypothetical protein PHAVU_002G186700g [Phaseolus vulgaris]
          Length = 751

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/57 (47%), Positives = 40/57 (70%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAV 173
           A+ F +EM++KG+ PD+V+   L+RKY E+GN+ E L L  +MM+RGL + T D  V
Sbjct: 690 AKSFLNEMLDKGIIPDQVLCIYLLRKYHELGNINEALTLHDDMMRRGLISRTIDITV 746


>ref|XP_006657060.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Oryza brachyantha]
          Length = 474

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSA 170
           AR  F EMI  G+ PD+ V+SCLI KYQ++GNLEE + LQ+EM +   +   SD+A
Sbjct: 414 AREVFSEMIGHGIAPDKAVYSCLISKYQKLGNLEEAIDLQNEMERALPSCTDSDTA 469


>gb|EOY01160.1| Pentatricopeptide repeat-containing protein, putative isoform 1
           [Theobroma cacao] gi|508709264|gb|EOY01161.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 1 [Theobroma cacao] gi|508709265|gb|EOY01162.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 1 [Theobroma cacao] gi|508709266|gb|EOY01163.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 1 [Theobroma cacao]
          Length = 779

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/61 (47%), Positives = 42/61 (68%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
           AR F DEMI K + PDE++   ++RKY E+G+++E + LQ+EM KRGL T     AV ++
Sbjct: 718 ARKFLDEMIRKHILPDEILCIGVLRKYYELGHVDEAIELQNEMAKRGLITSPIHYAVPSV 777

Query: 183 Q 185
           Q
Sbjct: 778 Q 778


>ref|XP_004298631.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Fragaria vesca subsp. vesca]
          Length = 760

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/48 (52%), Positives = 36/48 (75%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGL 146
           A+ F DEMI KG+ PDEV+   L+RKY E+GN++E + LQ+E+  RG+
Sbjct: 713 AKAFLDEMIRKGIIPDEVLIVSLVRKYYELGNVDEAIELQNELRNRGI 760


>dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/56 (50%), Positives = 38/56 (67%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSA 170
           AR  F EMI  G+ PD  V++CLI KYQ++GNLEE ++LQ EM +   +   SD+A
Sbjct: 627 AREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDSDTA 682


>ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
           gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa
           Japonica Group] gi|125597608|gb|EAZ37388.1| hypothetical
           protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/56 (50%), Positives = 38/56 (67%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSA 170
           AR  F EMI  G+ PD  V++CLI KYQ++GNLEE ++LQ EM +   +   SD+A
Sbjct: 627 AREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDSDTA 682


>ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/50 (52%), Positives = 38/50 (76%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTT 152
           AR FF+EMIEKG+ P+EV+  CL+R+Y + G L+E + L++EM + GL T
Sbjct: 728 ARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLIT 777


>gb|EXC44867.1| hypothetical protein L484_000446 [Morus notabilis]
          Length = 789

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/48 (52%), Positives = 36/48 (75%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGL 146
           A+ + DEMI KG+ PDE++  CL+RKY E+GN+ E   L+ E++KRGL
Sbjct: 728 AKTWLDEMIGKGILPDEILCVCLLRKYYELGNVVEADELRDELVKRGL 775


>gb|EXC19798.1| hypothetical protein L484_000854 [Morus notabilis]
          Length = 789

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/48 (52%), Positives = 36/48 (75%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGL 146
           A+ + DEMI KG+ PDE++  CL+RKY E+GN+ E   L+ E++KRGL
Sbjct: 728 AKTWLDEMIGKGILPDEILCVCLLRKYYELGNVVEADELRDELVKRGL 775


>ref|XP_004967235.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Setaria italica]
          Length = 701

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/56 (44%), Positives = 38/56 (67%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSA 170
           AR    EMI+ G+ PD+ V++CLI KYQ++GN+EE  +LQ+EM    ++    D+A
Sbjct: 641 AREVLSEMIQNGITPDKTVYNCLISKYQKLGNMEEASSLQNEMNSILISCTKDDTA 696


>ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
           gi|241942457|gb|EES15602.1| hypothetical protein
           SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/54 (50%), Positives = 39/54 (72%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSD 164
           AR    EMI  G+ PD+ V++CLIRKYQ++GN+EE  +LQ+E M+  L++ T D
Sbjct: 639 ARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNE-MESVLSSCTED 691


>ref|NP_178323.3| putative pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|218546751|sp|P0C894.1|PP143_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At2g02150 gi|330250459|gb|AEC05553.1| putative
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 761

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/60 (43%), Positives = 42/60 (70%)
 Frame = +3

Query: 3   ARFFFDEMIEKGVKPDEVVFSCLIRKYQEIGNLEEVLALQSEMMKRGLTTVTSDSAVHNM 182
           AR F +EMI +G+ PDEV+   +++K+ E+G ++E + LQS +MK  L T  +D+A+ NM
Sbjct: 702 ARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALPNM 761


Top