BLASTX nr result
ID: Atropa21_contig00014785
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00014785
(1261 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 208 1e-83
emb|CCH50954.1| T1.2 [Malus x robusta] 197 7e-75
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] 171 2e-72
emb|CCH50976.1| T4.15 [Malus x robusta] 211 2e-70
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas... 152 1e-67
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366... 152 5e-64
gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu] 141 8e-61
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc... 140 4e-58
gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptas... 126 1e-56
gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan... 139 2e-55
gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan... 139 2e-55
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He... 142 5e-55
emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-dir... 138 6e-52
gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori] 136 6e-52
gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan... 117 1e-48
gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Tritic... 115 1e-47
emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta... 123 3e-47
emb|CDJ85508.1| RNA-directed DNA polymerase (reverse transcripta... 122 3e-47
emb|CDJ97543.1| RNA-directed DNA polymerase (reverse transcripta... 115 5e-45
emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcripta... 115 8e-45
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 208 bits (530), Expect(2) = 1e-83
Identities = 96/208 (46%), Positives = 141/208 (67%)
Frame = +2
Query: 359 LAKVRERRARDLNHARCIKDGNDKVRVKDTHIEWR*QSYFHKLLNEKRDKDIVLGDMKQS 538
LA+ RE++ RDLN RCIKD + KV + ++ + + YFH L NE ++ LG++ S
Sbjct: 93 LARAREKKTRDLNQVRCIKDEDGKVLATENAVKDKWRGYFHNLFNEGHERSASLGELSNS 152
Query: 539 ERYQNFGYCRNIKVEEVKGVVRMMRKRCVIGPDEIPVEFWKSTGRAGLEWPTKLFNVIFK 718
E +N+ + R I+ EEV ++ M+ R +GPD+IP+E WK G G+ W LFN I K
Sbjct: 153 EECRNYSFYRRIRKEEVVVALKKMKHRKAVGPDDIPIEVWKVLGETGITWLIDLFNRILK 212
Query: 719 IMRMPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRVMEMRVRRGVSIFEN* 898
+MP E + S ++P+YKNKGD+ +C NYRGIKL+SHTMK+W+RV+E R+R+ + +N
Sbjct: 213 TKKMPNEWRTSPLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQ 272
Query: 899 FGFMPRSLTIEPIHLIRRLVEQYRKRKR 982
FGFMP T+E I+L+RRL+E+YR K+
Sbjct: 273 FGFMPGRSTMEAIYLLRRLMERYRDGKK 300
Score = 129 bits (325), Expect(2) = 1e-83
Identities = 59/95 (62%), Positives = 79/95 (83%)
Frame = +3
Query: 975 ERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSKH 1154
++DLHM+FIDLEKAYD+V R+++WR L+ +GV VAY +AIKDMY+GAKT VRT G ++
Sbjct: 299 KKDLHMVFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTES 358
Query: 1155 FPVMVGLHQGSTLNLFLFALVIDVLTR*IQGEVPW 1259
FP+ VGLHQGS+L+ +LFALV+D LT IQ ++PW
Sbjct: 359 FPITVGLHQGSSLSPYLFALVMDELTGHIQDDIPW 393
>emb|CCH50954.1| T1.2 [Malus x robusta]
Length = 554
Score = 197 bits (501), Expect(2) = 7e-75
Identities = 96/207 (46%), Positives = 139/207 (67%)
Frame = +2
Query: 359 LAKVRERRARDLNHARCIKDGNDKVRVKDTHIEWR*QSYFHKLLNEKRDKDIVLGDMKQS 538
LAKVRE++ RDLN RCIKD + KV + ++ R + YFH L NE + LG++ S
Sbjct: 112 LAKVREKKTRDLNQVRCIKDEDGKVLATENAVKDRLRDYFHNLFNEGHEWSTSLGELSNS 171
Query: 539 ERYQNFGYCRNIKVEEVKGVVRMMRKRCVIGPDEIPVEFWKSTGRAGLEWPTKLFNVIFK 718
E Y+N+ + R I+ EEV ++ M+ +GP++IP++ WK G G+ W T LFN I K
Sbjct: 172 EEYRNYFFYRRIRKEEVVVALKKMKHIKAVGPNDIPIKVWKVLGETGITWLTDLFNRILK 231
Query: 719 IMRMPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRVMEMRVRRGVSIFEN* 898
+ +M E + ST++P+YKNKGDI +C NYRGIKL+SHTMK+ RV+E R+R+ + +N
Sbjct: 232 MKKMSNEWRNSTLVPIYKNKGDIQNCMNYRGIKLMSHTMKLLARVIEHRLRQKTRVSDNQ 291
Query: 899 FGFMPRSLTIEPIHLIRRLVEQYRKRK 979
F FMP T+E I+L+R+L+E+YR K
Sbjct: 292 FKFMPGCSTMEAIYLLRKLMEKYRDGK 318
Score = 112 bits (279), Expect(2) = 7e-75
Identities = 52/80 (65%), Positives = 65/80 (81%)
Frame = +3
Query: 975 ERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSKH 1154
+ DLHM+FIDLEK YD+VPR++LWR L+ +GV VAY +AIKDMYDGAKT VRT G +
Sbjct: 318 KNDLHMVFIDLEKVYDRVPRDILWRILEKKGVRVAYIQAIKDMYDGAKTAVRTYEGQIES 377
Query: 1155 FPVMVGLHQGSTLNLFLFAL 1214
FP+ V LHQGS+L+ +LFAL
Sbjct: 378 FPITVRLHQGSSLSPYLFAL 397
>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 562
Score = 171 bits (434), Expect(2) = 2e-72
Identities = 85/189 (44%), Positives = 121/189 (64%)
Frame = +2
Query: 416 DGNDKVRVKDTHIEWR*QSYFHKLLNEKRDKDIVLGDMKQSERYQNFGYCRNIKVEEVKG 595
D + +V ++ I R +SYF++L NE + LG + E+ +NF Y R I+ EVK
Sbjct: 2 DKDGEVLAQEEKINERWKSYFYELFNEGQKTLSSLGRLCTREKDKNFDYYRRIRDFEVKE 61
Query: 596 VVRMMRKRCVIGPDEIPVEFWKSTGRAGLEWPTKLFNVIFKIMRMPKE*KWSTMIPLYKN 775
+ M+ +GPD IP+E WK G + W TKLFN I + +MP E + ST++P+YKN
Sbjct: 62 ALNQMKNDRAVGPDNIPIEVWKDLGEKDINWLTKLFNEILRSKKMPGEWRKSTLVPIYKN 121
Query: 776 KGDI*SCNNYRGIKLLSHTMKVWKRVMEMRVRRGVSIFEN*FGFMPRSLTIEPIHLIRRL 955
KGDI SC NYRGIKL++HTMK+W+RV+E +R+ + EN FGFM E I+L+RR+
Sbjct: 122 KGDIQSCENYRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRM 181
Query: 956 VEQYRKRKR 982
+E+YR KR
Sbjct: 182 MERYRSNKR 190
Score = 129 bits (324), Expect(2) = 2e-72
Identities = 60/95 (63%), Positives = 77/95 (81%)
Frame = +3
Query: 975 ERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSKH 1154
+RDLHM+FIDLEKAYD+VPREVLW+ L+ V +AY RAIKDMYDGA T V+T GG ++
Sbjct: 189 KRDLHMVFIDLEKAYDRVPREVLWKVLEKMRVRIAYIRAIKDMYDGATTSVKTQGGVTEE 248
Query: 1155 FPVMVGLHQGSTLNLFLFALVIDVLTR*IQGEVPW 1259
FP+ +GLHQGS+L+ +LF +V++VLT IQ VPW
Sbjct: 249 FPIGIGLHQGSSLSPYLFTIVLEVLTEHIQEPVPW 283
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 211 bits (538), Expect(3) = 2e-70
Identities = 99/208 (47%), Positives = 142/208 (68%)
Frame = +2
Query: 359 LAKVRERRARDLNHARCIKDGNDKVRVKDTHIEWR*QSYFHKLLNEKRDKDIVLGDMKQS 538
LA+ RE++ RDLN RCIKD + KV + ++ R + YFH L NE ++ L ++ S
Sbjct: 489 LARAREKKTRDLNQVRCIKDEDGKVLATENAVKDRWRGYFHNLFNEGHERSASLWELSNS 548
Query: 539 ERYQNFGYCRNIKVEEVKGVVRMMRKRCVIGPDEIPVEFWKSTGRAGLEWPTKLFNVIFK 718
E +N+ + R I+ EEV ++ M+ R IGPD+IP+E WK G G+ W T LFN I K
Sbjct: 549 EECRNYSFYRRIRKEEVVVALKKMKHRKAIGPDDIPIEVWKVLGETGITWLTDLFNRILK 608
Query: 719 IMRMPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRVMEMRVRRGVSIFEN* 898
+MP E + ST++P+YKNKGD+ +C NYRGIKL+SHTMK+W+RV+E R+R+ + +N
Sbjct: 609 TKKMPNEWRTSTLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQ 668
Query: 899 FGFMPRSLTIEPIHLIRRLVEQYRKRKR 982
FGFMP T+E I+L+RRL+E+YR K+
Sbjct: 669 FGFMPGRSTMEAIYLLRRLMERYRDGKK 696
Score = 54.3 bits (129), Expect(3) = 2e-70
Identities = 21/31 (67%), Positives = 29/31 (93%)
Frame = +3
Query: 975 ERDLHMIFIDLEKAYDKVPREVLWRCLKVRG 1067
++DLHM+FIDLEKAYD+VPR++LWR L+ +G
Sbjct: 695 KKDLHMVFIDLEKAYDRVPRDILWRILEKKG 725
Score = 50.1 bits (118), Expect(3) = 2e-70
Identities = 30/113 (26%), Positives = 49/113 (43%)
Frame = +3
Query: 3 LMAEGAWGSSGDATGMWDRTASCIREVAREVLGVLWGSHGRHRMD*WWNGXXXXXXXXXX 182
++ + W G+A+ MWD ASCIR+VA+EVLG G + WWN
Sbjct: 374 VITQCVWDREGEASQMWDSMASCIRKVAKEVLGESKGFAPHQKESWWWNEEVQTKVKAKK 433
Query: 183 XXXXXLVESKDEVEKWTNRELYKMARKEXXXXXXXXXXXXFECINVKLEKKGG 341
L + + + N E Y+ A++E ++ + +L+ K G
Sbjct: 434 ECCKALYKDRTD----ENGERYRKAKQEAKKAVREAKLAAYDDMYKRLDTKEG 482
>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 517
Score = 152 bits (384), Expect(3) = 1e-67
Identities = 83/217 (38%), Positives = 121/217 (55%)
Frame = +2
Query: 332 KRRDKKL*GLAKVRERRARDLNHARCIKDGNDKVRVKDTHIEWR*QSYFHKLLNEKRDKD 511
K +K + L+K RER+ RDL+ +CIKD +V V+
Sbjct: 92 KEGEKSIYKLSKGRERKTRDLDQVKCIKDEEGRVLVR----------------------- 128
Query: 512 IVLGDMKQSERYQNFGYCRNIKVEEVKGVVRMMRKRCVIGPDEIPVEFWKSTGRAGLEWP 691
N+ Y R I+ EV+ ++ M +GPD IP+E WKS G G W
Sbjct: 129 -------HRRGGPNYNYYRRIQEHEVREALKRMGSDEAVGPDNIPIEVWKSLGDRGTVWL 181
Query: 692 TKLFNVIFKIMRMPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRVMEMRVR 871
LFN I + +M E + ST+IP+ KNKGDI +C NYRGIKL+SHTMK+W+RV++ R+R
Sbjct: 182 ANLFNEIIRTKKMSDEWRRSTLIPIDKNKGDIQNCANYRGIKLMSHTMKLWERVIKRRLR 241
Query: 872 RGVSIFEN*FGFMPRSLTIEPIHLIRRLVEQYRKRKR 982
+ + +N FGFM T+E I+L++R++E+YR K+
Sbjct: 242 KETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDKK 278
Score = 116 bits (290), Expect(3) = 1e-67
Identities = 53/94 (56%), Positives = 71/94 (75%)
Frame = +3
Query: 975 ERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSKH 1154
++DLH++F DLEK YD+VPRE+LW+ L+ + V +AY RAIKDMY+ A T V+T G ++
Sbjct: 277 KKDLHLVFFDLEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTED 336
Query: 1155 FPVMVGLHQGSTLNLFLFALVIDVLTR*IQGEVP 1256
FP+ +GLHQGSTL +LF LV+DVLT IQ P
Sbjct: 337 FPITIGLHQGSTLTPYLFTLVLDVLTEHIQELAP 370
Score = 38.1 bits (87), Expect(3) = 1e-67
Identities = 30/98 (30%), Positives = 39/98 (39%)
Frame = +3
Query: 48 MWDRTASCIREVAREVLGVLWGSHGRHRMD*WWNGXXXXXXXXXXXXXXXLVESKDEVEK 227
MW+R A I++VA+E LG G R + WWN K+ VE
Sbjct: 1 MWERMAHEIKKVAKETLGESRGFGPRGKESWWWNDNVQSKVRIKRDCFKDWSRCKN-VET 59
Query: 228 WTNRELYKMARKEXXXXXXXXXXXXFECINVKLEKKGG 341
W + YK+ARKE FE + L K G
Sbjct: 60 W---DKYKIARKEAKKVVSEARTQAFEGLYQSLGTKEG 94
>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria
chalumnae]
Length = 1500
Score = 152 bits (385), Expect(2) = 5e-64
Identities = 78/221 (35%), Positives = 134/221 (60%)
Frame = +2
Query: 320 EIREKRRDKKL*GLAKVRERRARDLNHARCIKDGNDKVRVKDTHIEWR*QSYFHKLLNEK 499
++ + +K + +A+ RER+ RD + + IKD +V + + ++ R + YF KLLNE+
Sbjct: 282 KLDSREGEKMVYRIARARERKKRDFDQVKVIKDSEGQVILDENKVKERWREYFEKLLNEE 341
Query: 500 RDKDIVLGDMKQSERYQNFGYCRNIKVEEVKGVVRMMRKRCVIGPDEIPVEFWKSTGRAG 679
++ + + + N I EEV ++ M+ R GPDE+P+E +K G
Sbjct: 342 NPREELPEGLPE-----NHTAVEGITKEEVIQAMKKMKNRKATGPDEVPIETFKEMKEMG 396
Query: 680 LEWPTKLFNVIFKIMRMPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRVME 859
L T+L+ I++ +MP E + ST++P++K KGD+ CNNYRGI L+SH MK+W+R++E
Sbjct: 397 LVVLTRLYRAIWEEGKMPTEWRESTLVPVFKRKGDVQDCNNYRGIALMSHAMKLWERIIE 456
Query: 860 MRVRRGVSIFEN*FGFMPRSLTIEPIHLIRRLVEQYRKRKR 982
R+R+ V I EN FGF TI+ I ++ L+E+Y+++++
Sbjct: 457 KRLRKLVQISENQFGFCQGRSTIDAIFALKILMEKYKEKRK 497
Score = 120 bits (301), Expect(2) = 5e-64
Identities = 54/96 (56%), Positives = 71/96 (73%)
Frame = +3
Query: 972 KERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSK 1151
K +DLHM+F+DLEKAYD+VPR ++W C++ RG+P Y R +KDMY G+K VR+ G +
Sbjct: 495 KRKDLHMVFVDLEKAYDRVPRGLIWWCMRKRGIPEVYIRLVKDMYQGSKIWVRSACGTTT 554
Query: 1152 HFPVMVGLHQGSTLNLFLFALVIDVLTR*IQGEVPW 1259
FPV VG+ QGS L+ FLF LV+D LT+ IQ E PW
Sbjct: 555 SFPVKVGVRQGSALSPFLFILVLDTLTKDIQKEPPW 590
>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
Length = 605
Score = 141 bits (355), Expect(2) = 8e-61
Identities = 63/119 (52%), Positives = 91/119 (76%)
Frame = +2
Query: 626 IGPDEIPVEFWKSTGRAGLEWPTKLFNVIFKIMRMPKE*KWSTMIPLYKNKGDI*SCNNY 805
+GPD IP+E WK G + W TKLFN+IF+ +MP+E + S ++P++KNK D+ C NY
Sbjct: 1 MGPDCIPIEVWKGLGDIAIVWLTKLFNLIFRANKMPEEWRRSILVPIFKNKEDVQGCTNY 60
Query: 806 RGIKLLSHTMKVWKRVMEMRVRRGVSIFEN*FGFMPRSLTIEPIHLIRRLVEQYRKRKR 982
RGIKL+SHTMK+W+RV+E R+RR S+ +N FGFMP T+E I L+R+L+E+YR++K+
Sbjct: 61 RGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMERYREQKK 119
Score = 121 bits (303), Expect(2) = 8e-61
Identities = 55/96 (57%), Positives = 71/96 (73%)
Frame = +3
Query: 972 KERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSK 1151
+++DLHM+FIDLEK+YDK+PR V+W LK VP Y IKDMYD T VRT D+
Sbjct: 117 QKKDLHMVFIDLEKSYDKIPRNVMWWALKKHKVPAKYITLIKDMYDNVVTSVRTSDVDTD 176
Query: 1152 HFPVMVGLHQGSTLNLFLFALVIDVLTR*IQGEVPW 1259
FP+ +GLHQGS L+ +LFALV+D +TR IQG++PW
Sbjct: 177 DFPIKIGLHQGSALSPYLFALVMDEVTRDIQGDIPW 212
>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
Length = 1134
Score = 140 bits (354), Expect(2) = 4e-58
Identities = 63/119 (52%), Positives = 91/119 (76%)
Frame = +2
Query: 626 IGPDEIPVEFWKSTGRAGLEWPTKLFNVIFKIMRMPKE*KWSTMIPLYKNKGDI*SCNNY 805
+GPD IP+E WK G + W TKLFN+IF+ +MP+E + S ++P++KNKGD+ C NY
Sbjct: 331 MGPDCIPIEVWKGLGDIAIVWLTKLFNLIFRANKMPEEWRRSILVPIFKNKGDVQICTNY 390
Query: 806 RGIKLLSHTMKVWKRVMEMRVRRGVSIFEN*FGFMPRSLTIEPIHLIRRLVEQYRKRKR 982
RGIKL+SHTMK+W+RV+E R+RR S+ +N FGFMP T+E I L+R+L+ +YR++K+
Sbjct: 391 RGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMVRYREQKK 449
Score = 112 bits (281), Expect(2) = 4e-58
Identities = 54/96 (56%), Positives = 70/96 (72%)
Frame = +3
Query: 972 KERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSK 1151
+++DLHM+FIDLEKAY+K+PR LW L VP Y IKDMYD A T VRT D+
Sbjct: 447 QKKDLHMVFIDLEKAYNKIPRN-LWWALDKHKVPAKYITLIKDMYDNAVTSVRTSDIDTD 505
Query: 1152 HFPVMVGLHQGSTLNLFLFALVIDVLTR*IQGEVPW 1259
FP+ +GLHQGS L+ +LFAL++D +TR IQG++PW
Sbjct: 506 DFPIKIGLHQGSALSPYLFALLMDEVTRDIQGDIPW 541
>gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 243
Score = 126 bits (317), Expect(2) = 1e-56
Identities = 58/94 (61%), Positives = 76/94 (80%)
Frame = +3
Query: 975 ERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSKH 1154
++DLH++FIDLEKAYD+VPRE+LW+ LK +GV +AY +AI+DMY+GA T VRT GD+
Sbjct: 128 KKDLHLVFIDLEKAYDRVPREILWKALKKKGVRIAYIKAIQDMYEGASTCVRTQDGDTVD 187
Query: 1155 FPVMVGLHQGSTLNLFLFALVIDVLTR*IQGEVP 1256
FP+ +GLHQGSTL+ +LF LV+DVLT IQ P
Sbjct: 188 FPITIGLHQGSTLSPYLFTLVLDVLTEHIQELAP 221
Score = 122 bits (305), Expect(2) = 1e-56
Identities = 58/105 (55%), Positives = 72/105 (68%)
Frame = +2
Query: 539 ERYQNFGYCRNIKVEEVKGVVRMMRKRCVIGPDEIPVEFWKSTGRAGLEWPTKLFNVIFK 718
E QN+ Y R I+ EVK ++ M +GPD IP+E WKS G G+ W TKLFN I K
Sbjct: 6 EEDQNYNYYRRIQEHEVKEALKRMSNGKAVGPDNIPIEVWKSLGDRGIVWLTKLFNEIMK 65
Query: 719 IMRMPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRV 853
+M E + ST+IP+YKNKGDI C NYRGIKL+SHTMK+W+RV
Sbjct: 66 TKKMLDEWRRSTLIPIYKNKGDIQHCANYRGIKLMSHTMKLWERV 110
>gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
Length = 1253
Score = 139 bits (350), Expect(2) = 2e-55
Identities = 70/208 (33%), Positives = 121/208 (58%)
Frame = +2
Query: 359 LAKVRERRARDLNHARCIKDGNDKVRVKDTHIEWR*QSYFHKLLNEKRDKDIVLGDMKQS 538
LA+ R++ +D+ +KD + ++ R + YF +LLN + + +
Sbjct: 705 LARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFKELLNTQHPCSL------PT 758
Query: 539 ERYQNFGYCRNIKVEEVKGVVRMMRKRCVIGPDEIPVEFWKSTGRAGLEWPTKLFNVIFK 718
E N G I +E + +R M+ R +GPD+IP+E WKS G G+ T LFN +
Sbjct: 759 EIPPNLGLIAPITPDETRNCLRRMKNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLN 818
Query: 719 IMRMPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRVMEMRVRRGVSIFEN* 898
MP + ++S + P+YK +G + C +YRG+K++SHTMK+++R++++R+RR ++ E
Sbjct: 819 TGTMPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQ 878
Query: 899 FGFMPRSLTIEPIHLIRRLVEQYRKRKR 982
+GF P S T++ I IR L+E YR+++R
Sbjct: 879 YGFQPGSGTLDAIFAIRTLMEAYREKRR 906
Score = 105 bits (261), Expect(2) = 2e-55
Identities = 48/96 (50%), Positives = 68/96 (70%)
Frame = +3
Query: 972 KERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSK 1151
K R LH+ F+DL+KA+D VPR+ +W L+ +G+P AY I+DMY + + VRT GD+K
Sbjct: 904 KRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTK 963
Query: 1152 HFPVMVGLHQGSTLNLFLFALVIDVLTR*IQGEVPW 1259
FP+ VGLHQGS L+ FLF +V+D ++ IQ + PW
Sbjct: 964 PFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPW 999
>gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
Length = 985
Score = 139 bits (350), Expect(2) = 2e-55
Identities = 70/208 (33%), Positives = 121/208 (58%)
Frame = +2
Query: 359 LAKVRERRARDLNHARCIKDGNDKVRVKDTHIEWR*QSYFHKLLNEKRDKDIVLGDMKQS 538
LA+ R++ +D+ +KD + ++ R + YF +LLN + + +
Sbjct: 437 LARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFKELLNTQHPCSL------PT 490
Query: 539 ERYQNFGYCRNIKVEEVKGVVRMMRKRCVIGPDEIPVEFWKSTGRAGLEWPTKLFNVIFK 718
E N G I +E + +R M+ R +GPD+IP+E WKS G G+ T LFN +
Sbjct: 491 EIPPNLGLIAPITPDETRNCLRRMKNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLN 550
Query: 719 IMRMPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRVMEMRVRRGVSIFEN* 898
MP + ++S + P+YK +G + C +YRG+K++SHTMK+++R++++R+RR ++ E
Sbjct: 551 TGTMPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQ 610
Query: 899 FGFMPRSLTIEPIHLIRRLVEQYRKRKR 982
+GF P S T++ I IR L+E YR+++R
Sbjct: 611 YGFQPGSGTLDAIFAIRTLMEAYREKRR 638
Score = 105 bits (261), Expect(2) = 2e-55
Identities = 48/96 (50%), Positives = 68/96 (70%)
Frame = +3
Query: 972 KERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSK 1151
K R LH+ F+DL+KA+D VPR+ +W L+ +G+P AY I+DMY + + VRT GD+K
Sbjct: 636 KRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTK 695
Query: 1152 HFPVMVGLHQGSTLNLFLFALVIDVLTR*IQGEVPW 1259
FP+ VGLHQGS L+ FLF +V+D ++ IQ + PW
Sbjct: 696 PFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPW 731
>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
Length = 990
Score = 142 bits (357), Expect(2) = 5e-55
Identities = 71/208 (34%), Positives = 123/208 (59%)
Frame = +2
Query: 359 LAKVRERRARDLNHARCIKDGNDKVRVKDTHIEWR*QSYFHKLLNEKRDKDIVLGDMKQS 538
LA+ R++ +D+ C++D + ++ R +SYF +LLN + +
Sbjct: 438 LARSRDKVTQDIAKCLCVRDSQGTLLCNHDSVKERWRSYFQELLNTQHPCSL------HH 491
Query: 539 ERYQNFGYCRNIKVEEVKGVVRMMRKRCVIGPDEIPVEFWKSTGRAGLEWPTKLFNVIFK 718
+ N G I ++E + +R M+ +GPD+IP+E WKS G G+ T LFN I
Sbjct: 492 DPPPNLGLIAPITLDETRNCLRRMKNGKAVGPDDIPIEAWKSLGSLGVLMLTDLFNHILN 551
Query: 719 IMRMPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRVMEMRVRRGVSIFEN* 898
+MP + + S + P+YK +G + C +YRGIKL+SHTMK+++R++++R+RR ++ E+
Sbjct: 552 TGKMPHQWRLSFITPIYKGRGSVQDCGSYRGIKLMSHTMKLFERMIDLRLRRECTVSESQ 611
Query: 899 FGFMPRSLTIEPIHLIRRLVEQYRKRKR 982
+GF P S T++ I +R L+E YR+++R
Sbjct: 612 YGFQPGSGTMDAIFALRTLMEAYREKRR 639
Score = 101 bits (251), Expect(2) = 5e-55
Identities = 45/96 (46%), Positives = 67/96 (69%)
Frame = +3
Query: 972 KERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSK 1151
K R LH+ F+DL+KA+D VPR+ +W L+ +G+P AY I+ MY + + VRT GD++
Sbjct: 637 KRRALHVAFLDLQKAFDCVPRQCIWWALRSKGIPEAYIEIIRGMYHDSASMVRTAVGDTR 696
Query: 1152 HFPVMVGLHQGSTLNLFLFALVIDVLTR*IQGEVPW 1259
FP+ VG+HQGS L+ FLF +V+D ++ IQ + PW
Sbjct: 697 PFPITVGVHQGSALSPFLFNVVLDTVSAHIQDQPPW 732
>emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase
(reverse transcriptase) domain containing protein
[Haemonchus contortus]
Length = 816
Score = 138 bits (348), Expect(2) = 6e-52
Identities = 70/211 (33%), Positives = 120/211 (56%)
Frame = +2
Query: 359 LAKVRERRARDLNHARCIKDGNDKVRVKDTHIEWR*QSYFHKLLNEKRDKDIVLGDMKQS 538
LAK R R +D+ + +++ + K + R + YF +LLNE+ ++ S
Sbjct: 403 LAKARHRATQDIRVVKAVRNSEGAILRKPGEVRRRWKEYFDRLLNEEFARE------NSS 456
Query: 539 ERYQNFGYCRNIKVEEVKGVVRMMRKRCVIGPDEIPVEFWKSTGRAGLEWPTKLFNVIFK 718
G + +EV+ + M+ GPD +P+E WK+ G G++W T+ N +
Sbjct: 457 HSEATAGPIKLWTEDEVRKAIGKMKVGKATGPDGVPIEAWKALGEHGIKWLTRFLNTVTA 516
Query: 719 IMRMPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRVMEMRVRRGVSIFEN* 898
R+P + ST++P++K KGD C+NYRGI+L +HTMK+++R+++ R+R V I E
Sbjct: 517 EGRIPDAWRRSTIVPIFKQKGDAMDCSNYRGIRLTAHTMKLYERLVDSRLRELVPISEGQ 576
Query: 899 FGFMPRSLTIEPIHLIRRLVEQYRKRKRLTY 991
FGFMP T + I + R+++E+YR+++R Y
Sbjct: 577 FGFMPERSTTDAIFIARQIMEKYREKRRPCY 607
Score = 94.4 bits (233), Expect(2) = 6e-52
Identities = 44/87 (50%), Positives = 59/87 (67%)
Frame = +3
Query: 972 KERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSK 1151
K R ++ F+DLEKA+D++PREVLW L+ R VP +KDMYDG+ T +RT G +
Sbjct: 602 KRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGQTG 661
Query: 1152 HFPVMVGLHQGSTLNLFLFALVIDVLT 1232
V VG+HQGS L+ FLF L +DV+T
Sbjct: 662 AIDVTVGVHQGSALSPFLFLLTMDVIT 688
>gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]
Length = 996
Score = 136 bits (343), Expect(3) = 6e-52
Identities = 77/224 (34%), Positives = 122/224 (54%)
Frame = +2
Query: 320 EIREKRRDKKL*GLAKVRERRARDLNHARCIKDGNDKVRVKDTHIEWR*QSYFHKLLNEK 499
++ K K + LAK R RD R +KD N ++ D+ + Y+ +LLN
Sbjct: 427 QLETKEGQKCIFKLAKQRCWSTRDPTRCRAVKDPNGELLYGDSDVLSAWHQYYEQLLNPT 486
Query: 500 RDKDIVLGDMKQSERYQNFGYCRNIKVEEVKGVVRMMRKRCVIGPDEIPVEFWKSTGRAG 679
+ ++ ++ +N G I+ E K + M + GPD IPVE WK G
Sbjct: 487 Q------AAIQLTKVVRNIGLIPPIRPNEFKMALEKMPNKKATGPDGIPVEAWKCLREHG 540
Query: 680 LEWPTKLFNVIFKIMRMPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRVME 859
+E TKLFN + + +MP + ST++P+YK KG C+NYRGIKLLSHTMK+++RV++
Sbjct: 541 IETLTKLFNCVLRSSKMPAAWRLSTIVPIYKGKGSKYECSNYRGIKLLSHTMKLYERVID 600
Query: 860 MRVRRGVSIFEN*FGFMPRSLTIEPIHLIRRLVEQYRKRKRLTY 991
R+R S+ +N +GF+ T +P+ + + E+YR++ R Y
Sbjct: 601 SRLRSECSLSKNHYGFVQGLSTTDPMFALNTIAEEYREKLRPLY 644
Score = 93.6 bits (231), Expect(3) = 6e-52
Identities = 46/96 (47%), Positives = 61/96 (63%)
Frame = +3
Query: 972 KERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSK 1151
K R L++ F+D+EKA+D+VPR+ +W L+ + VP Y I DMY A++ VRTV G +K
Sbjct: 639 KLRPLYVAFLDMEKAFDRVPRDTIWWSLRKKNVPEHYVNVIIDMYRDARSMVRTVVGQTK 698
Query: 1152 HFPVMVGLHQGSTLNLFLFALVIDVLTR*IQGEVPW 1259
V GLHQGS L+ FLF +VID LT Q W
Sbjct: 699 PIAVAEGLHQGSVLSPFLFGMVIDSLTEVAQSSASW 734
Score = 23.5 bits (49), Expect(3) = 6e-52
Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 6/108 (5%)
Frame = +3
Query: 36 DATGMWDRTASCIREVAREVLGVLWGSHGRHRMD*WWNGXXXXXXXXXXXXXXXLVESKD 215
D +WD + I + LG G ++ WW + + KD
Sbjct: 336 DIDNIWDHLSKSIVKAGNITLGRTKGGRINNKETWWWT----------EAVQNAIQKKKD 385
Query: 216 EVEKW------TNRELYKMARKEXXXXXXXXXXXXFECINVKLEKKGG 341
+ W ++E YK +KE + + +LE K G
Sbjct: 386 AFKTWQSTQTSEDQERYKRIKKETKKIVAVERAVALKTMYEQLETKEG 433
>gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
Length = 472
Score = 117 bits (292), Expect(2) = 1e-48
Identities = 52/125 (41%), Positives = 86/125 (68%)
Frame = +2
Query: 608 MRKRCVIGPDEIPVEFWKSTGRAGLEWPTKLFNVIFKIMRMPKE*KWSTMIPLYKNKGDI 787
M+ R +GPD+IP+E WKS G G+ T LFN + MP + ++S + P+YK +G +
Sbjct: 1 MKNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSV 60
Query: 788 *SCNNYRGIKLLSHTMKVWKRVMEMRVRRGVSIFEN*FGFMPRSLTIEPIHLIRRLVEQY 967
C +YRG+K++SHTMK+++R++++R+RR ++ E +GF P S T++ I IR L+E Y
Sbjct: 61 QDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAY 120
Query: 968 RKRKR 982
R+++R
Sbjct: 121 REKRR 125
Score = 105 bits (261), Expect(2) = 1e-48
Identities = 48/96 (50%), Positives = 68/96 (70%)
Frame = +3
Query: 972 KERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSK 1151
K R LH+ F+DL+KA+D VPR+ +W L+ +G+P AY I+DMY + + VRT GD+K
Sbjct: 123 KRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTK 182
Query: 1152 HFPVMVGLHQGSTLNLFLFALVIDVLTR*IQGEVPW 1259
FP+ VGLHQGS L+ FLF +V+D ++ IQ + PW
Sbjct: 183 PFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPW 218
>gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Triticum urartu]
Length = 974
Score = 115 bits (288), Expect(2) = 1e-47
Identities = 54/95 (56%), Positives = 69/95 (72%)
Frame = +3
Query: 972 KERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSK 1151
+++DLHM+FIDLEKAYDK+PR V+W L+ VP Y IKDMYD T VRT D
Sbjct: 83 QKKDLHMVFIDLEKAYDKIPRNVMWWALEKHKVPTKYITLIKDMYDNVVTSVRTSDVDID 142
Query: 1152 HFPVMVGLHQGSTLNLFLFALVIDVLTR*IQGEVP 1256
FP+ +GLHQGS L+ +LFALV+D +TR IQG++P
Sbjct: 143 DFPIKIGLHQGSALSPYLFALVMDEVTRDIQGDIP 177
Score = 102 bits (255), Expect(2) = 1e-47
Identities = 46/85 (54%), Positives = 69/85 (81%)
Frame = +2
Query: 728 MPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRVMEMRVRRGVSIFEN*FGF 907
MP+E + S ++P++KNKGD+ S NYRGIKL+SHTMK+W+RV+E R+RR S+ +N FGF
Sbjct: 1 MPEEWRLSILVPIFKNKGDVQSFTNYRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGF 60
Query: 908 MPRSLTIEPIHLIRRLVEQYRKRKR 982
MP T+E I L+R+L+++YR++K+
Sbjct: 61 MPGRSTMEAIFLVRQLMKRYREQKK 85
>emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
protein [Haemonchus contortus]
Length = 1526
Score = 123 bits (309), Expect(2) = 3e-47
Identities = 70/225 (31%), Positives = 118/225 (52%), Gaps = 1/225 (0%)
Frame = +2
Query: 320 EIREKRRDKK-L*GLAKVRERRARDLNHARCIKDGNDKVRVKDTHIEWR*QSYFHKLLNE 496
EI + R +K + LAK R +D+ + +K+ + + YF LLNE
Sbjct: 452 EILDSREGEKFVFRLAKARHLATQDIGVVKSVKNSEGAILTXXXXXXXXWEEYFDGLLNE 511
Query: 497 KRDKDIVLGDMKQSERYQNFGYCRNIKVEEVKGVVRMMRKRCVIGPDEIPVEFWKSTGRA 676
+ S+ G EV+ + M+ GPD +P++ WK+ G
Sbjct: 512 E------FARQNSSQLEATAGPINLWTENEVRRAMGKMKVGKATGPDGVPIKAWKALGEH 565
Query: 677 GLEWPTKLFNVIFKIMRMPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRVM 856
G++W T+ N + R+P + ST++P++K KGD C+NYRGI+L +HTMK+++R++
Sbjct: 566 GVKWLTRFLNTVTAKGRIPDAWRRSTIVPIFKQKGDAMDCSNYRGIRLAAHTMKLYERLV 625
Query: 857 EMRVRRGVSIFEN*FGFMPRSLTIEPIHLIRRLVEQYRKRKRLTY 991
+ R+R V I E FGFMP T + I + R+++ +YR+++R Y
Sbjct: 626 DSRLRELVPISEKQFGFMPGRSTTDAIFITRQVMGKYREKRRPCY 670
Score = 93.6 bits (231), Expect(2) = 3e-47
Identities = 44/87 (50%), Positives = 60/87 (68%)
Frame = +3
Query: 972 KERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSK 1151
K R ++ F+DLEKA+D++PR+VLWR L+ R VP +KDMYDG+ T +RT G +
Sbjct: 665 KRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRTPHGQTG 724
Query: 1152 HFPVMVGLHQGSTLNLFLFALVIDVLT 1232
V VG+HQGS L+ FLF L +DV+T
Sbjct: 725 AIDVTVGVHQGSALSPFLFLLTMDVIT 751
>emb|CDJ85508.1| RNA-directed DNA polymerase (reverse transcriptase) domain
containing protein [Haemonchus contortus]
Length = 432
Score = 122 bits (305), Expect(2) = 3e-47
Identities = 65/211 (30%), Positives = 116/211 (54%)
Frame = +2
Query: 359 LAKVRERRARDLNHARCIKDGNDKVRVKDTHIEWR*QSYFHKLLNEKRDKDIVLGDMKQS 538
LAK R R +D+ + +++ + K + R + YF +LLNE+ ++ S
Sbjct: 20 LAKARHRATQDIGVVKSVRNSEGAILRKPGKVRRRWKEYFDRLLNEEFARE------NSS 73
Query: 539 ERYQNFGYCRNIKVEEVKGVVRMMRKRCVIGPDEIPVEFWKSTGRAGLEWPTKLFNVIFK 718
G + +EV+ + M+ GPD +P+E W++ G G++W T+ N +
Sbjct: 74 HLEATAGPIKLWTEDEVRIAIGKMKVGKATGPDGVPIEAWEALGEHGIKWLTRFLNTVSA 133
Query: 719 IMRMPKE*KWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWKRVMEMRVRRGVSIFEN* 898
R+P + S + P++K KGD C+N RGI+L +HT+K+++R+++ R+R V I E+
Sbjct: 134 EGRIPDAWRRSAIDPIFKQKGDAMDCSNCRGIRLAAHTIKLYERLVDSRLRDLVPISEDQ 193
Query: 899 FGFMPRSLTIEPIHLIRRLVEQYRKRKRLTY 991
GFMP T + I + R+++E+YR ++R Y
Sbjct: 194 IGFMPERSTTDAIFIARQIMEKYRGKRRPCY 224
Score = 95.1 bits (235), Expect(2) = 3e-47
Identities = 44/88 (50%), Positives = 60/88 (68%)
Frame = +3
Query: 969 GKERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDS 1148
GK R ++ F+DLEKA+D++PREVLW L+ R VP +KDMYDG+ T +RT G +
Sbjct: 218 GKRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGRT 277
Query: 1149 KHFPVMVGLHQGSTLNLFLFALVIDVLT 1232
V VG+HQGS L+ FLF + +DV+T
Sbjct: 278 GAIDVTVGVHQGSALSPFLFLITMDVIT 305
>emb|CDJ97543.1| RNA-directed DNA polymerase (reverse transcriptase) domain
containing protein [Haemonchus contortus]
Length = 258
Score = 115 bits (288), Expect(2) = 5e-45
Identities = 50/121 (41%), Positives = 83/121 (68%)
Frame = +2
Query: 629 GPDEIPVEFWKSTGRAGLEWPTKLFNVIFKIMRMPKE*KWSTMIPLYKNKGDI*SCNNYR 808
GPD +P+E WK+ G G++W T+ N + R+P + ST++P++K KGD C+NYR
Sbjct: 11 GPDGVPIEAWKALGEYGVKWLTRFLNTVTAEGRIPDAWRKSTIVPIFKQKGDAMECSNYR 70
Query: 809 GIKLLSHTMKVWKRVMEMRVRRGVSIFEN*FGFMPRSLTIEPIHLIRRLVEQYRKRKRLT 988
GI+L +HTMK+++R+++ R+R V I + FGFMP T + I + R+++E+YR+++R
Sbjct: 71 GIRLTAHTMKLYERLVDSRLRELVPISQKQFGFMPERSTTDAIFIARQVMEKYREKRRPC 130
Query: 989 Y 991
Y
Sbjct: 131 Y 131
Score = 94.4 bits (233), Expect(2) = 5e-45
Identities = 44/88 (50%), Positives = 61/88 (69%)
Frame = +3
Query: 972 KERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSK 1151
K R ++ F+DLEKA+D++PR+VLWR L+ R VP +KDMYDG+ T +RT G +
Sbjct: 126 KRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRTPHGQTG 185
Query: 1152 HFPVMVGLHQGSTLNLFLFALVIDVLTR 1235
V VG+HQGS L+ FLF L +DV+T+
Sbjct: 186 AIDVTVGVHQGSALSPFLFLLTMDVITK 213
>emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcriptase) domain
containing protein [Haemonchus contortus]
Length = 479
Score = 115 bits (288), Expect(2) = 8e-45
Identities = 50/121 (41%), Positives = 83/121 (68%)
Frame = +2
Query: 629 GPDEIPVEFWKSTGRAGLEWPTKLFNVIFKIMRMPKE*KWSTMIPLYKNKGDI*SCNNYR 808
GPD +P+E WK+ G G++W T+ N + R+P + ST++P++K KGD C+NYR
Sbjct: 11 GPDGVPIEAWKALGEYGVKWLTRFLNTVTAEGRIPDAWRKSTIVPIFKQKGDAMECSNYR 70
Query: 809 GIKLLSHTMKVWKRVMEMRVRRGVSIFEN*FGFMPRSLTIEPIHLIRRLVEQYRKRKRLT 988
GI+L +HTMK+++R+++ R+R V I + FGFMP T + I + R+++E+YR+++R
Sbjct: 71 GIRLTTHTMKLYERLVDSRLRELVPISQKQFGFMPERSTTDAIFIARQVMEKYREKRRPC 130
Query: 989 Y 991
Y
Sbjct: 131 Y 131
Score = 93.6 bits (231), Expect(2) = 8e-45
Identities = 44/87 (50%), Positives = 60/87 (68%)
Frame = +3
Query: 972 KERDLHMIFIDLEKAYDKVPREVLWRCLKVRGVPVAYTRAIKDMYDGAKTRVRTVGGDSK 1151
K R ++ F+DLEKA+D++PR+VLWR L+ R VP +KDMYDG+ T +RT G +
Sbjct: 126 KRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRTPHGQTG 185
Query: 1152 HFPVMVGLHQGSTLNLFLFALVIDVLT 1232
V VG+HQGS L+ FLF L +DV+T
Sbjct: 186 AIDVTVGVHQGSALSPFLFLLTMDVIT 212