BLASTX nr result

ID: Atropa21_contig00014703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00014703
         (822 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT74390.1| rapid alkalinization factor 5 [Solanum chacoense]       77   7e-12
ref|XP_006338350.1| PREDICTED: rapid alkalinization factor-like ...    74   6e-11
ref|XP_004233659.1| PREDICTED: uncharacterized protein LOC101261...    67   1e-08
gb|AAR00328.1| rapid alkalinization factor 4 [Solanum chacoense]       66   2e-08
ref|XP_004232155.1| PREDICTED: uncharacterized protein LOC101256...    60   1e-06

>gb|AAT74390.1| rapid alkalinization factor 5 [Solanum chacoense]
          Length = 107

 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 46/82 (56%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
 Frame = -2

Query: 671 ECNGTAS-IGECLADVDEFLMESQTSTMLRANVKRPSLK-----ALQGPAICHEHIYGNC 510
           ECNGT+S IG CL DVDEFLMES+TST + A     S K     A    AIC E I GNC
Sbjct: 25  ECNGTSSSIGACLVDVDEFLMESETSTRILAGGNARSQKLNYKAAGNKAAICKEKIVGNC 84

Query: 509 IGNPKNPPKGQCNYENRCNRKI 444
           IGN KN     CN+ NRC R I
Sbjct: 85  IGN-KNVKATHCNFGNRCKRVI 105


>ref|XP_006338350.1| PREDICTED: rapid alkalinization factor-like [Solanum tuberosum]
          Length = 113

 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 44/83 (53%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
 Frame = -2

Query: 671 ECNGTAS-IGECLADVDEFLMESQTSTMLRA---NVKRPSL---KALQGPAICHEHIYGN 513
           ECNGT+S IG CL DVDEFLMES+TST + A   N +   L    A +  AIC+E IYGN
Sbjct: 29  ECNGTSSSIGACLVDVDEFLMESETSTRILAAGGNARSQKLSYGSAGKKAAICNEKIYGN 88

Query: 512 CIGNPKNPPKGQCNYENRCNRKI 444
           CI N KN    +CN   RC R +
Sbjct: 89  CINN-KNVKATRCNSGTRCKRDV 110


>ref|XP_004233659.1| PREDICTED: uncharacterized protein LOC101261881 [Solanum
           lycopersicum]
          Length = 118

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 39/83 (46%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
 Frame = -2

Query: 671 ECNGTAS-IGECLADVDEFLMESQTSTML------RANVKRPSLKALQGPAICHEHIYGN 513
           ECNGT+S I  CL D DE LMES+TS+ +       A   R + KA   P IC+E I GN
Sbjct: 34  ECNGTSSSIDACLRDDDELLMESETSSRILLAAGGNARSGRLNYKATGKPEICNEQIVGN 93

Query: 512 CIGNPKNPPKGQCNYENRCNRKI 444
           CI N KN     CN+  RC R +
Sbjct: 94  CINN-KNVKATHCNFGTRCKRDV 115


>gb|AAR00328.1| rapid alkalinization factor 4 [Solanum chacoense]
          Length = 114

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 42/83 (50%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
 Frame = -2

Query: 671 ECNGTAS-IGECLADVDEFLMESQTST-MLRANVKRPSLKALQGPA-----ICHEHIYGN 513
           ECNGT+S IG CL DVDEFLMES+TST +L A     S K   G A     IC+E IYG+
Sbjct: 31  ECNGTSSSIGACLVDVDEFLMESETSTRVLAAGGNARSQKLSYGSAGKKAEICNEKIYGD 90

Query: 512 CIGNPKNPPKGQCNYENRCNRKI 444
           CI N +N    +C    RC R +
Sbjct: 91  CINN-ENVKATRCIPGTRCKRVV 112


>ref|XP_004232155.1| PREDICTED: uncharacterized protein LOC101256732 [Solanum
           lycopersicum]
          Length = 109

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 41/83 (49%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
 Frame = -2

Query: 680 GKLECNGTASIGECLADVDEFLMESQTSTMLRA-NVKRPSLK---ALQGPAICHEHIYGN 513
           G LECNGT S      DVDEFLMES TSTM+ A N K+  L    A     IC E+IYGN
Sbjct: 26  GALECNGTKS-NIAPDDVDEFLMESHTSTMILAGNAKKERLSLNAAGDRGEICKENIYGN 84

Query: 512 CIGNPKNPPKGQCNYENRCNRKI 444
           CI + +N  K +C    RC R +
Sbjct: 85  CI-DDENVHKTRCVPGVRCKRDV 106


Top