BLASTX nr result
ID: Atropa21_contig00013279
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00013279
(1266 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004231740.1| PREDICTED: transcription-repair-coupling fac... 584 0.0
ref|XP_006338749.1| PREDICTED: uncharacterized protein LOC102592... 584 0.0
ref|XP_006468934.1| PREDICTED: uncharacterized protein LOC102609... 451 e-139
ref|XP_006446881.1| hypothetical protein CICLE_v10017439mg [Citr... 450 e-138
ref|XP_002320427.1| DEAD/DEAH box helicase family protein [Popul... 447 e-138
gb|EOY02994.1| DEAD/DEAH box helicase [Theobroma cacao] 450 e-137
ref|XP_002303013.2| DEAD/DEAH box helicase family protein [Popul... 443 e-136
ref|XP_002302957.2| hypothetical protein POPTR_0002s23840g [Popu... 443 e-136
ref|XP_006408576.1| hypothetical protein EUTSA_v10020076mg [Eutr... 444 e-136
dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila] 444 e-136
ref|XP_006408575.1| hypothetical protein EUTSA_v10020076mg [Eutr... 444 e-136
ref|XP_006300243.1| hypothetical protein CARUB_v10016483mg [Caps... 440 e-135
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac... 442 e-135
ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis th... 439 e-135
ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis... 439 e-135
ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arab... 436 e-135
gb|AAK43897.1|AF370520_1 putative helicase [Arabidopsis thaliana] 437 e-134
gb|AAN72199.1| putative helicase [Arabidopsis thaliana] 437 e-134
ref|XP_004493106.1| PREDICTED: transcription-repair-coupling fac... 429 e-132
gb|EXB41421.1| Transcription-repair-coupling factor [Morus notab... 424 e-131
>ref|XP_004231740.1| PREDICTED: transcription-repair-coupling factor-like [Solanum
lycopersicum]
Length = 826
Score = 584 bits (1505), Expect(2) = 0.0
Identities = 303/344 (88%), Positives = 314/344 (91%), Gaps = 4/344 (1%)
Frame = -2
Query: 1172 MAVAKASLLFSPSPAPEGFRLSKLFPTTQNPH----SSSSITLTKVLHADAAYTKLPPRV 1005
MA AKASL FSPS RL KLF TTQ P SSSSITLT VL+ADA +TKLPPR+
Sbjct: 1 MAAAKASLFFSPSECFLTTRLCKLFSTTQKPSFPSPSSSSITLTNVLNADAVHTKLPPRL 60
Query: 1004 RTARQQEHERDSISLLNDRIRWDHAKRDQSMPLRPVMDSEEADKYIQLVKEQQQRGLQKL 825
R ARQ E ERD+ISLLN+RIR +HAKRD S PLRP MDSEEADKYIQLVKEQQQRGLQKL
Sbjct: 61 RNARQ-EQERDAISLLNERIRREHAKRDHS-PLRPAMDSEEADKYIQLVKEQQQRGLQKL 118
Query: 824 KNDRAKHGAPHDSAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEY 645
K+DRA+ GAPHD+AQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEY
Sbjct: 119 KSDRARQGAPHDAAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEY 178
Query: 644 VFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRKKGKVAVQKMV 465
VFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRR KGKVAVQKMV
Sbjct: 179 VFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRMKGKVAVQKMV 238
Query: 464 VDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPTPDQKQAFLDVERDLTERENPMDRL 285
VDLM+LYLHRLKQKRPPYPKT AMAEFASQFPFEPTPDQKQAF DVERDLTE ENPMDRL
Sbjct: 239 VDLMELYLHRLKQKRPPYPKTPAMAEFASQFPFEPTPDQKQAFSDVERDLTESENPMDRL 298
Query: 284 ICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVV 153
ICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDV+
Sbjct: 299 ICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVI 342
Score = 85.9 bits (211), Expect(2) = 0.0
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
SEKEEYLS+IKDGHVDI+VGTHSLLGNRVEYNNLGLLVVDEEQ
Sbjct: 364 SEKEEYLSMIKDGHVDIIVGTHSLLGNRVEYNNLGLLVVDEEQ 406
>ref|XP_006338749.1| PREDICTED: uncharacterized protein LOC102592949 [Solanum tuberosum]
Length = 825
Score = 584 bits (1505), Expect(2) = 0.0
Identities = 302/341 (88%), Positives = 312/341 (91%), Gaps = 4/341 (1%)
Frame = -2
Query: 1163 AKASLLFSPSPAPEGFRLSKLFPTTQNPH----SSSSITLTKVLHADAAYTKLPPRVRTA 996
AKASL FSPS R KLFPTTQ P SSSSITLT VL+ADA YTKLPPR+R A
Sbjct: 3 AKASLFFSPSECFLTTRFCKLFPTTQKPSFPSPSSSSITLTNVLNADAVYTKLPPRLRNA 62
Query: 995 RQQEHERDSISLLNDRIRWDHAKRDQSMPLRPVMDSEEADKYIQLVKEQQQRGLQKLKND 816
RQ E ERD+ISLLN+RIR +HAKRD S PLRP MDSEEADKYIQLVKEQQQRGLQKLK+D
Sbjct: 63 RQ-EQERDAISLLNERIRREHAKRDHS-PLRPAMDSEEADKYIQLVKEQQQRGLQKLKSD 120
Query: 815 RAKHGAPHDSAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEYVFI 636
RA+ GAPHD+AQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEYVFI
Sbjct: 121 RARQGAPHDAAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEYVFI 180
Query: 635 EYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRKKGKVAVQKMVVDL 456
EYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRR KGKVAVQKMVVDL
Sbjct: 181 EYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRMKGKVAVQKMVVDL 240
Query: 455 MQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPTPDQKQAFLDVERDLTERENPMDRLICG 276
M+LYLHRLKQKRPPYPKT AMAEFASQFPFEPTPDQKQAF DVERDLTE ENPMDRLICG
Sbjct: 241 MELYLHRLKQKRPPYPKTPAMAEFASQFPFEPTPDQKQAFSDVERDLTESENPMDRLICG 300
Query: 275 DVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVV 153
DVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDV+
Sbjct: 301 DVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVI 341
Score = 82.8 bits (203), Expect(2) = 0.0
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
SEKEEYLS+IKDG VDI+VGTHSLLGNRVEYNNLGLLVVDEEQ
Sbjct: 363 SEKEEYLSMIKDGRVDIIVGTHSLLGNRVEYNNLGLLVVDEEQ 405
>ref|XP_006468934.1| PREDICTED: uncharacterized protein LOC102609921 [Citrus sinensis]
Length = 835
Score = 451 bits (1161), Expect(2) = e-139
Identities = 234/308 (75%), Positives = 260/308 (84%), Gaps = 7/308 (2%)
Frame = -2
Query: 1055 TKVLHADAAYTKLPPRVRTARQQEHERDSISLLNDRIRWDHAKRDQSMPLRPVMDSEEAD 876
T L + +K P + R + E+E D IS+LN+RIR D KR+ + RPVMDSEEAD
Sbjct: 49 TPGLSLSSPTSKKPTQRR--EKNENETDDISILNERIRRDFGKREAT---RPVMDSEEAD 103
Query: 875 KYIQLVKEQQQRGLQKLKNDRAKHGAPHDSAQPT-------FSYKVDPYTLRSGDYVVHR 717
KYIQLVKEQQQ+GLQKLK ++ G A + FSYKVDPY+LRSGDYVVH+
Sbjct: 104 KYIQLVKEQQQKGLQKLKGKKSGGGGAGAGAGDSGYNGAGGFSYKVDPYSLRSGDYVVHK 163
Query: 716 KVGIGRFVGIKFDVPKDSKEPIEYVFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTL 537
KVGIG+FVGIKFDV KDS PIEYVFIEYADGMAKLPVKQASR+LYRYNLPNETKRPRTL
Sbjct: 164 KVGIGKFVGIKFDVQKDSTVPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETKRPRTL 223
Query: 536 SKLSDTSAWERRRKKGKVAVQKMVVDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPT 357
SKLSDT+AWERR+ KGKVA+QKMVVDLM+LYLHRLKQKRPPYPK A+AEFA+QFP+EPT
Sbjct: 224 SKLSDTTAWERRKTKGKVAIQKMVVDLMELYLHRLKQKRPPYPKNPAIAEFAAQFPYEPT 283
Query: 356 PDQKQAFLDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 177
PDQK+AF+DVERDLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL
Sbjct: 284 PDQKKAFIDVERDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 343
Query: 176 AKQHFDVV 153
AKQHFDVV
Sbjct: 344 AKQHFDVV 351
Score = 70.9 bits (172), Expect(2) = e-139
Identities = 33/43 (76%), Positives = 40/43 (93%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKEE+L +IK GH++I+VGTHSLLG+RV YNNLGLLVVDEEQ
Sbjct: 373 AEKEEHLDMIKHGHLNIIVGTHSLLGSRVVYNNLGLLVVDEEQ 415
>ref|XP_006446881.1| hypothetical protein CICLE_v10017439mg [Citrus clementina]
gi|557549492|gb|ESR60121.1| hypothetical protein
CICLE_v10017439mg [Citrus clementina]
Length = 835
Score = 450 bits (1157), Expect(2) = e-138
Identities = 234/308 (75%), Positives = 259/308 (84%), Gaps = 7/308 (2%)
Frame = -2
Query: 1055 TKVLHADAAYTKLPPRVRTARQQEHERDSISLLNDRIRWDHAKRDQSMPLRPVMDSEEAD 876
T L + +K P + R + E+E D IS+LN+RIR D KR+ + RPVMDSEEAD
Sbjct: 49 TPGLSLSSPTSKKPTQRR--EKNENETDDISILNERIRRDFGKREAT---RPVMDSEEAD 103
Query: 875 KYIQLVKEQQQRGLQKLKNDRAKHGAPHDSAQPT-------FSYKVDPYTLRSGDYVVHR 717
KYIQLVKEQQQ+GLQKLK ++ G A + FSYKVDPY+LRS DYVVH+
Sbjct: 104 KYIQLVKEQQQKGLQKLKGKKSGGGGAGAGAGDSGYNGAGGFSYKVDPYSLRSSDYVVHK 163
Query: 716 KVGIGRFVGIKFDVPKDSKEPIEYVFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTL 537
KVGIG+FVGIKFDV KDS PIEYVFIEYADGMAKLPVKQASR+LYRYNLPNETKRPRTL
Sbjct: 164 KVGIGKFVGIKFDVQKDSTVPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETKRPRTL 223
Query: 536 SKLSDTSAWERRRKKGKVAVQKMVVDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPT 357
SKLSDT+AWERR+ KGKVA+QKMVVDLM+LYLHRLKQKRPPYPK A+AEFA+QFP+EPT
Sbjct: 224 SKLSDTTAWERRKTKGKVAIQKMVVDLMELYLHRLKQKRPPYPKNPAIAEFAAQFPYEPT 283
Query: 356 PDQKQAFLDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 177
PDQK+AFLDVERDLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL
Sbjct: 284 PDQKKAFLDVERDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 343
Query: 176 AKQHFDVV 153
AKQHFDVV
Sbjct: 344 AKQHFDVV 351
Score = 70.9 bits (172), Expect(2) = e-138
Identities = 33/43 (76%), Positives = 40/43 (93%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKEE+L +IK GH++I+VGTHSLLG+RV YNNLGLLVVDEEQ
Sbjct: 373 AEKEEHLDMIKHGHLNIIVGTHSLLGSRVVYNNLGLLVVDEEQ 415
>ref|XP_002320427.1| DEAD/DEAH box helicase family protein [Populus trichocarpa]
gi|222861200|gb|EEE98742.1| DEAD/DEAH box helicase family
protein [Populus trichocarpa]
Length = 817
Score = 447 bits (1150), Expect(2) = e-138
Identities = 241/330 (73%), Positives = 266/330 (80%), Gaps = 9/330 (2%)
Frame = -2
Query: 1115 RLSKLF----PTTQNPHSSSSITLTKVLHADAAYTKLPPRVRTARQQ---EHERDSISLL 957
+L +LF P N S S+T +A T +P RTA + E E+D IS+L
Sbjct: 19 KLRRLFSVKLPYRHNHKPSFSLT-----NAVRTQTAVPFSSRTATPKYKIETEQDPISIL 73
Query: 956 NDRIRWDH-AKRDQSMPLRPVMDSEEADKYIQLVKEQQQRGLQKLKNDR-AKHGAPHDSA 783
N+RIR H KR+ S RP+MDSEEAD+YIQ+VKEQQQRGLQKLK DR AK G
Sbjct: 74 NERIRRQHHGKREGS---RPIMDSEEADQYIQMVKEQQQRGLQKLKGDRVAKEG------ 124
Query: 782 QPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEYVFIEYADGMAKLPV 603
FSYKVDPYTLRSGDYVVH+KVGIGRF GIKFDVPK S E IEYVFIEYADGMAKLPV
Sbjct: 125 -DVFSYKVDPYTLRSGDYVVHKKVGIGRFFGIKFDVPKGSSEAIEYVFIEYADGMAKLPV 183
Query: 602 KQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRKKGKVAVQKMVVDLMQLYLHRLKQK 423
QASR+LYRYNLPNETKRPRTLSKLSDT AWERR+ KGKVA+QKMVVDLM+LYLHRLKQ+
Sbjct: 184 MQASRMLYRYNLPNETKRPRTLSKLSDTGAWERRKTKGKVAIQKMVVDLMELYLHRLKQR 243
Query: 422 RPPYPKTLAMAEFASQFPFEPTPDQKQAFLDVERDLTERENPMDRLICGDVGFGKTEVAL 243
RPPYPKT MAEFA+QFP+EPTPDQK AF+DVERDL +RE PMDRLICGDVGFGKTEVAL
Sbjct: 244 RPPYPKTPFMAEFAAQFPYEPTPDQKLAFIDVERDLNQRETPMDRLICGDVGFGKTEVAL 303
Query: 242 RAIFCVVSAGKQAMVLAPTIVLAKQHFDVV 153
RAIFC+VSAGKQAMVLAPTIVLAKQHFDV+
Sbjct: 304 RAIFCIVSAGKQAMVLAPTIVLAKQHFDVI 333
Score = 72.8 bits (177), Expect(2) = e-138
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKE YL++I+ GH+DI+VGTHSLLGNRV YNNLGLLVVDEEQ
Sbjct: 355 AEKEMYLNMIEHGHLDIIVGTHSLLGNRVVYNNLGLLVVDEEQ 397
>gb|EOY02994.1| DEAD/DEAH box helicase [Theobroma cacao]
Length = 1251
Score = 450 bits (1157), Expect(2) = e-137
Identities = 233/320 (72%), Positives = 265/320 (82%), Gaps = 8/320 (2%)
Frame = -2
Query: 1088 QNPHSSSSITLTKVLHADAAYT-------KLPPRVRTARQQEHERDSISLLNDRIRWDHA 930
+N SS I T+ ++ + KL P+ + E E D+IS+LN+RIR +H
Sbjct: 45 RNNRSSFPILTTQAVYTQGGVSISSLDTHKLAPK---REKVELETDAISILNERIRREHG 101
Query: 929 KRDQSMPLRPVMDSEEADKYIQLVKEQQQRGLQKLKNDRA-KHGAPHDSAQPTFSYKVDP 753
KR+ + RPVMDS+EADKYIQLVKEQQQRGLQKLK DR K G FSYKVDP
Sbjct: 102 KREAT---RPVMDSQEADKYIQLVKEQQQRGLQKLKGDRERKEGG-------VFSYKVDP 151
Query: 752 YTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEYVFIEYADGMAKLPVKQASRLLYRY 573
YTLRSGDYVVH+KVG+GRFVGIKFDVPK S EPIEY FIEYADGMAKLPVKQA+R+LYRY
Sbjct: 152 YTLRSGDYVVHKKVGVGRFVGIKFDVPKGSTEPIEYAFIEYADGMAKLPVKQAARMLYRY 211
Query: 572 NLPNETKRPRTLSKLSDTSAWERRRKKGKVAVQKMVVDLMQLYLHRLKQKRPPYPKTLAM 393
NLPNE+K+PRTLSKLSDTS WERR+ KGKVA+QKMVVDLM+LYLHRLKQ+R PYPK+ AM
Sbjct: 212 NLPNESKKPRTLSKLSDTSVWERRKIKGKVAIQKMVVDLMELYLHRLKQRRSPYPKSPAM 271
Query: 392 AEFASQFPFEPTPDQKQAFLDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAG 213
AEFA+QFP++PTPDQKQAF+DVE+DLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAG
Sbjct: 272 AEFAAQFPYKPTPDQKQAFIDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAG 331
Query: 212 KQAMVLAPTIVLAKQHFDVV 153
+QAMVLAPTIVLAKQHFDV+
Sbjct: 332 RQAMVLAPTIVLAKQHFDVI 351
Score = 66.6 bits (161), Expect(2) = e-137
Identities = 32/43 (74%), Positives = 39/43 (90%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKEE+L++IK G + I+VGTHSLLG+RV YNNLGLLVVDEEQ
Sbjct: 373 AEKEEHLNMIKKGDLAIIVGTHSLLGSRVVYNNLGLLVVDEEQ 415
>ref|XP_002303013.2| DEAD/DEAH box helicase family protein [Populus trichocarpa]
gi|550345697|gb|EEE82286.2| DEAD/DEAH box helicase family
protein [Populus trichocarpa]
Length = 939
Score = 443 bits (1139), Expect(2) = e-136
Identities = 228/309 (73%), Positives = 255/309 (82%), Gaps = 4/309 (1%)
Frame = -2
Query: 1067 SITLTKVLHADAAYTKLPPRVRTARQQ---EHERDSISLLNDRIRWDHAKRDQSMPLRPV 897
S +LT H A LP RT + E E+D IS+LN+RIR H + + +P+
Sbjct: 37 SFSLTNAAHTQTA---LPFSSRTTTPKYKIESEQDPISILNERIRRQHHGKREGSNSKPI 93
Query: 896 MDSEEADKYIQLVKEQQQRGLQKLKNDR-AKHGAPHDSAQPTFSYKVDPYTLRSGDYVVH 720
MDSEEAD+YIQ+VKEQQQRGLQKLK DR AK G FSYKVDPYTL SGDYVVH
Sbjct: 94 MDSEEADQYIQMVKEQQQRGLQKLKGDRVAKEG-------DVFSYKVDPYTLSSGDYVVH 146
Query: 719 RKVGIGRFVGIKFDVPKDSKEPIEYVFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRT 540
+KVGIGRFVGIKFD+ K S E IEYVFIEYADGMAKLPVKQASR+LYRYNLPN+TK+PRT
Sbjct: 147 KKVGIGRFVGIKFDMSKGSSEAIEYVFIEYADGMAKLPVKQASRMLYRYNLPNDTKKPRT 206
Query: 539 LSKLSDTSAWERRRKKGKVAVQKMVVDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEP 360
LSKLSD AWERR+ KGKVA+QKMVVDLM+LYLHRLKQ+RPPYPKT AM +F++QFP+EP
Sbjct: 207 LSKLSDNGAWERRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKTPAMVDFSAQFPYEP 266
Query: 359 TPDQKQAFLDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIV 180
TPDQKQAF+DV RDLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIV
Sbjct: 267 TPDQKQAFIDVMRDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIV 326
Query: 179 LAKQHFDVV 153
LA+QHFDV+
Sbjct: 327 LARQHFDVI 335
Score = 70.1 bits (170), Expect(2) = e-136
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKE YL + K GH+DI+VGTHSLLG+RV YNNLGLLVVDEEQ
Sbjct: 363 AEKEMYLEMTKHGHLDIIVGTHSLLGSRVVYNNLGLLVVDEEQ 405
>ref|XP_002302957.2| hypothetical protein POPTR_0002s23840g [Populus trichocarpa]
gi|550345698|gb|EEE82230.2| hypothetical protein
POPTR_0002s23840g [Populus trichocarpa]
Length = 838
Score = 443 bits (1139), Expect(2) = e-136
Identities = 228/309 (73%), Positives = 255/309 (82%), Gaps = 4/309 (1%)
Frame = -2
Query: 1067 SITLTKVLHADAAYTKLPPRVRTARQQ---EHERDSISLLNDRIRWDHAKRDQSMPLRPV 897
S +LT H A LP RT + E E+D IS+LN+RIR H + + +P+
Sbjct: 37 SFSLTNAAHTQTA---LPFSSRTTTPKYKIESEQDPISILNERIRRQHHGKREGSNSKPI 93
Query: 896 MDSEEADKYIQLVKEQQQRGLQKLKNDR-AKHGAPHDSAQPTFSYKVDPYTLRSGDYVVH 720
MDSEEAD+YIQ+VKEQQQRGLQKLK DR AK G FSYKVDPYTL SGDYVVH
Sbjct: 94 MDSEEADQYIQMVKEQQQRGLQKLKGDRVAKEG-------DVFSYKVDPYTLSSGDYVVH 146
Query: 719 RKVGIGRFVGIKFDVPKDSKEPIEYVFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRT 540
+KVGIGRFVGIKFD+ K S E IEYVFIEYADGMAKLPVKQASR+LYRYNLPN+TK+PRT
Sbjct: 147 KKVGIGRFVGIKFDMSKGSSEAIEYVFIEYADGMAKLPVKQASRMLYRYNLPNDTKKPRT 206
Query: 539 LSKLSDTSAWERRRKKGKVAVQKMVVDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEP 360
LSKLSD AWERR+ KGKVA+QKMVVDLM+LYLHRLKQ+RPPYPKT AM +F++QFP+EP
Sbjct: 207 LSKLSDNGAWERRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKTPAMVDFSAQFPYEP 266
Query: 359 TPDQKQAFLDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIV 180
TPDQKQAF+DV RDLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIV
Sbjct: 267 TPDQKQAFIDVMRDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIV 326
Query: 179 LAKQHFDVV 153
LA+QHFDV+
Sbjct: 327 LARQHFDVI 335
Score = 70.1 bits (170), Expect(2) = e-136
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKE YL + K GH+DI+VGTHSLLG+RV YNNLGLLVVDEEQ
Sbjct: 363 AEKEMYLEMTKHGHLDIIVGTHSLLGSRVVYNNLGLLVVDEEQ 405
>ref|XP_006408576.1| hypothetical protein EUTSA_v10020076mg [Eutrema salsugineum]
gi|567204573|ref|XP_006408577.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
gi|557109722|gb|ESQ50029.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
gi|557109723|gb|ESQ50030.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
Length = 823
Score = 444 bits (1143), Expect(2) = e-136
Identities = 241/344 (70%), Positives = 270/344 (78%)
Frame = -2
Query: 1184 LIHPMAVAKASLLFSPSPAPEGFRLSKLFPTTQNPHSSSSITLTKVLHADAAYTKLPPRV 1005
L +P V+ L+F P RL L + +SSS+ L V A K P R
Sbjct: 5 LPNPDLVSTTPLVFKLYSFPPPRRLFTL-RRSSFARNSSSLPLVAVSSLSATAAK-PTRW 62
Query: 1004 RTARQQEHERDSISLLNDRIRWDHAKRDQSMPLRPVMDSEEADKYIQLVKEQQQRGLQKL 825
R +Q+ E DSISLLN+RIR D KR+ S RP MDSEEADKYIQ+VKEQQ+RGLQKL
Sbjct: 63 RE-KQEFAENDSISLLNERIRRDLGKRETS---RPAMDSEEADKYIQMVKEQQERGLQKL 118
Query: 824 KNDRAKHGAPHDSAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEY 645
K R + FSYKVDPY+L SGDYVVH+KVGIGRFVGIKFDVPKDS EP+EY
Sbjct: 119 KGVRQ---GTETGSGGGFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEY 175
Query: 644 VFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRKKGKVAVQKMV 465
VFIEYADGMAKLP+KQASRLLYRYNLPNETKRPRTLS+LSDTS WERR+ KGKVA+QKMV
Sbjct: 176 VFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMV 235
Query: 464 VDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPTPDQKQAFLDVERDLTERENPMDRL 285
VDLM+LYLHRL+QKR PYPK MA+FA+QFP+ TPDQKQAFLDV++DLTERE PMDRL
Sbjct: 236 VDLMELYLHRLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVDKDLTERETPMDRL 295
Query: 284 ICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVV 153
ICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQH+DV+
Sbjct: 296 ICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHYDVI 339
Score = 68.2 bits (165), Expect(2) = e-136
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKEEYL +IK+G ++I+VGTHSLLG+RV Y+NLGLLVVDEEQ
Sbjct: 361 AEKEEYLEMIKNGDLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 403
>dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]
Length = 823
Score = 444 bits (1143), Expect(2) = e-136
Identities = 241/344 (70%), Positives = 270/344 (78%)
Frame = -2
Query: 1184 LIHPMAVAKASLLFSPSPAPEGFRLSKLFPTTQNPHSSSSITLTKVLHADAAYTKLPPRV 1005
L +P V+ L+F P RL L + +SSS+ L V A K P R
Sbjct: 5 LPNPDLVSTTPLVFKLYSFPPPRRLFTL-RRSSFARNSSSLPLVAVSSLSATAAK-PTRW 62
Query: 1004 RTARQQEHERDSISLLNDRIRWDHAKRDQSMPLRPVMDSEEADKYIQLVKEQQQRGLQKL 825
R +Q+ E DSISLLN+RIR D KR+ S RP MDSEEADKYIQ+VKEQQ+RGLQKL
Sbjct: 63 RE-KQEFAENDSISLLNERIRRDLGKRETS---RPAMDSEEADKYIQMVKEQQERGLQKL 118
Query: 824 KNDRAKHGAPHDSAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEY 645
K R + FSYKVDPY+L SGDYVVH+KVGIGRFVGIKFDVPKDS EP+EY
Sbjct: 119 KGVRQ---GTETGSGGGFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEY 175
Query: 644 VFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRKKGKVAVQKMV 465
VFIEYADGMAKLP+KQASRLLYRYNLPNETKRPRTLS+LSDTS WERR+ KGKVA+QKMV
Sbjct: 176 VFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMV 235
Query: 464 VDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPTPDQKQAFLDVERDLTERENPMDRL 285
VDLM+LYLHRL+QKR PYPK MA+FA+QFP+ TPDQKQAFLDV++DLTERE PMDRL
Sbjct: 236 VDLMELYLHRLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVDKDLTERETPMDRL 295
Query: 284 ICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVV 153
ICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQH+DV+
Sbjct: 296 ICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHYDVI 339
Score = 68.2 bits (165), Expect(2) = e-136
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKEEYL +IK+G ++I+VGTHSLLG+RV Y+NLGLLVVDEEQ
Sbjct: 361 AEKEEYLEMIKNGDLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 403
>ref|XP_006408575.1| hypothetical protein EUTSA_v10020076mg [Eutrema salsugineum]
gi|557109721|gb|ESQ50028.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
Length = 801
Score = 444 bits (1143), Expect(2) = e-136
Identities = 241/344 (70%), Positives = 270/344 (78%)
Frame = -2
Query: 1184 LIHPMAVAKASLLFSPSPAPEGFRLSKLFPTTQNPHSSSSITLTKVLHADAAYTKLPPRV 1005
L +P V+ L+F P RL L + +SSS+ L V A K P R
Sbjct: 5 LPNPDLVSTTPLVFKLYSFPPPRRLFTL-RRSSFARNSSSLPLVAVSSLSATAAK-PTRW 62
Query: 1004 RTARQQEHERDSISLLNDRIRWDHAKRDQSMPLRPVMDSEEADKYIQLVKEQQQRGLQKL 825
R +Q+ E DSISLLN+RIR D KR+ S RP MDSEEADKYIQ+VKEQQ+RGLQKL
Sbjct: 63 RE-KQEFAENDSISLLNERIRRDLGKRETS---RPAMDSEEADKYIQMVKEQQERGLQKL 118
Query: 824 KNDRAKHGAPHDSAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEY 645
K R + FSYKVDPY+L SGDYVVH+KVGIGRFVGIKFDVPKDS EP+EY
Sbjct: 119 KGVRQ---GTETGSGGGFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEY 175
Query: 644 VFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRKKGKVAVQKMV 465
VFIEYADGMAKLP+KQASRLLYRYNLPNETKRPRTLS+LSDTS WERR+ KGKVA+QKMV
Sbjct: 176 VFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMV 235
Query: 464 VDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPTPDQKQAFLDVERDLTERENPMDRL 285
VDLM+LYLHRL+QKR PYPK MA+FA+QFP+ TPDQKQAFLDV++DLTERE PMDRL
Sbjct: 236 VDLMELYLHRLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVDKDLTERETPMDRL 295
Query: 284 ICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVV 153
ICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQH+DV+
Sbjct: 296 ICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHYDVI 339
Score = 68.2 bits (165), Expect(2) = e-136
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKEEYL +IK+G ++I+VGTHSLLG+RV Y+NLGLLVVDEEQ
Sbjct: 361 AEKEEYLEMIKNGDLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 403
>ref|XP_006300243.1| hypothetical protein CARUB_v10016483mg [Capsella rubella]
gi|482568952|gb|EOA33141.1| hypothetical protein
CARUB_v10016483mg [Capsella rubella]
Length = 828
Score = 440 bits (1132), Expect(2) = e-135
Identities = 236/321 (73%), Positives = 262/321 (81%)
Frame = -2
Query: 1115 RLSKLFPTTQNPHSSSSITLTKVLHADAAYTKLPPRVRTARQQEHERDSISLLNDRIRWD 936
R S L T+N SSS + L V A K P R R + + E DSISLLN+RIR D
Sbjct: 34 RRSSLAKITRN--SSSLLPLVAVSSLSATAAK-PTRWRE-KPELAESDSISLLNERIRRD 89
Query: 935 HAKRDQSMPLRPVMDSEEADKYIQLVKEQQQRGLQKLKNDRAKHGAPHDSAQPTFSYKVD 756
KR+ + RP MDSEEA+KYIQ+VKEQQ+RGLQKLK R A + FSYKVD
Sbjct: 90 LGKRETA---RPAMDSEEAEKYIQMVKEQQERGLQKLKGFRQGTEA---AGAGGFSYKVD 143
Query: 755 PYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEYVFIEYADGMAKLPVKQASRLLYR 576
PY+L SGDYVVH+KVGIGRFVGIKFDVPKDS EP+EYVFIEYADGMAKLP+KQASRLLYR
Sbjct: 144 PYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMAKLPLKQASRLLYR 203
Query: 575 YNLPNETKRPRTLSKLSDTSAWERRRKKGKVAVQKMVVDLMQLYLHRLKQKRPPYPKTLA 396
YNLPNETKRPRTLS+LSDTS WERR+ KGKVA+QKMVVDLM+LYLHRL+QKR PYPK
Sbjct: 204 YNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMELYLHRLRQKRYPYPKNPI 263
Query: 395 MAEFASQFPFEPTPDQKQAFLDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSA 216
MA+FA+QFP+ TPDQKQAFLDVE+DLTERE PMDRLICGDVGFGKTEVALRAIFCVVSA
Sbjct: 264 MADFAAQFPYNATPDQKQAFLDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSA 323
Query: 215 GKQAMVLAPTIVLAKQHFDVV 153
GKQAMVLAPTIVLAKQH+DV+
Sbjct: 324 GKQAMVLAPTIVLAKQHYDVI 344
Score = 71.2 bits (173), Expect(2) = e-135
Identities = 33/43 (76%), Positives = 40/43 (93%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKEEYL +IK GH++I+VGTHSLLG+RV Y+NLGLLVVDEEQ
Sbjct: 366 AEKEEYLEMIKSGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 408
>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis vinifera]
Length = 823
Score = 442 bits (1138), Expect(2) = e-135
Identities = 227/297 (76%), Positives = 251/297 (84%), Gaps = 3/297 (1%)
Frame = -2
Query: 1034 AAYTK---LPPRVRTARQQEHERDSISLLNDRIRWDHAKRDQSMPLRPVMDSEEADKYIQ 864
A YT+ + V+ + E E D I++LN+RIR + +KRD S PV+DSEEADKYIQ
Sbjct: 51 AVYTEGVSITRSVQRRERMEPESDDITILNERIRREQSKRDVSRA--PVVDSEEADKYIQ 108
Query: 863 LVKEQQQRGLQKLKNDRAKHGAPHDSAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIK 684
LVKEQQ+RGLQKLK +R FSYKVDPYTLRSGDYVVH+KVGIGRFVGIK
Sbjct: 109 LVKEQQRRGLQKLKGERV------GKENGQFSYKVDPYTLRSGDYVVHKKVGIGRFVGIK 162
Query: 683 FDVPKDSKEPIEYVFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWER 504
DVPKDS PIEYVFIEYADGMAKLPVKQASR+LYRYNLP+E+KRPRTLSKLSDTS WER
Sbjct: 163 LDVPKDSSNPIEYVFIEYADGMAKLPVKQASRMLYRYNLPSESKRPRTLSKLSDTSIWER 222
Query: 503 RRKKGKVAVQKMVVDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPTPDQKQAFLDVE 324
RR KG+VA+QKMVVDLM+LYLHRLKQKRPPYPK+ MAEF +QF +EPTPDQKQAF+DVE
Sbjct: 223 RRIKGRVAIQKMVVDLMELYLHRLKQKRPPYPKSPGMAEFEAQFSYEPTPDQKQAFIDVE 282
Query: 323 RDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVV 153
DLTERE PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDV+
Sbjct: 283 EDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVI 339
Score = 67.4 bits (163), Expect(2) = e-135
Identities = 32/43 (74%), Positives = 39/43 (90%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKE++L +IK G +DI+VGTHSLLGNRV Y+NLGLLVVDEEQ
Sbjct: 361 AEKEKHLRMIKHGDLDIIVGTHSLLGNRVVYSNLGLLVVDEEQ 403
>ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
gi|332640233|gb|AEE73754.1| putative DEAD/DEAH box
helicase [Arabidopsis thaliana]
Length = 823
Score = 439 bits (1128), Expect(2) = e-135
Identities = 231/308 (75%), Positives = 255/308 (82%)
Frame = -2
Query: 1076 SSSSITLTKVLHADAAYTKLPPRVRTARQQEHERDSISLLNDRIRWDHAKRDQSMPLRPV 897
SSS + L V A K P R R + + E DSISLLN+RIR D KR+ + RP
Sbjct: 40 SSSLLPLVAVSSLSATAAK-PTRWRE-KPELAESDSISLLNERIRRDLGKRETA---RPA 94
Query: 896 MDSEEADKYIQLVKEQQQRGLQKLKNDRAKHGAPHDSAQPTFSYKVDPYTLRSGDYVVHR 717
MDSEEA+KYI +VKEQQ+RGLQKLK R A D A FSYKVDPY+L SGDYVVH+
Sbjct: 95 MDSEEAEKYIHMVKEQQERGLQKLKGIRQGTKAAGDGA---FSYKVDPYSLLSGDYVVHK 151
Query: 716 KVGIGRFVGIKFDVPKDSKEPIEYVFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTL 537
KVGIGRFVGIKFDVPKDS EP+EYVFIEYADGMAKLP+KQASRLLYRYNLPNETKRPRTL
Sbjct: 152 KVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTL 211
Query: 536 SKLSDTSAWERRRKKGKVAVQKMVVDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPT 357
S+LSDTS WERR+ KGKVA+QKMVVDLM+LYLHRL+QKR PYPK MA+FA+QFP+ T
Sbjct: 212 SRLSDTSVWERRKTKGKVAIQKMVVDLMELYLHRLRQKRYPYPKNPIMADFAAQFPYNAT 271
Query: 356 PDQKQAFLDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 177
PDQKQAFLDVE+DLTERE PMDRLICGDVGFGKTEVALRAIFCVVS GKQAMVLAPTIVL
Sbjct: 272 PDQKQAFLDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSTGKQAMVLAPTIVL 331
Query: 176 AKQHFDVV 153
AKQH+DV+
Sbjct: 332 AKQHYDVI 339
Score = 70.9 bits (172), Expect(2) = e-135
Identities = 33/43 (76%), Positives = 40/43 (93%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKEEYL +IK GH++I+VGTHSLLG+RV Y+NLGLLVVDEEQ
Sbjct: 361 AEKEEYLEMIKTGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 403
>ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
gi|6513947|gb|AAF14851.1|AC011664_33 putative helicase
[Arabidopsis thaliana] gi|332640234|gb|AEE73755.1|
putative DEAD/DEAH box helicase [Arabidopsis thaliana]
Length = 822
Score = 439 bits (1128), Expect(2) = e-135
Identities = 231/308 (75%), Positives = 255/308 (82%)
Frame = -2
Query: 1076 SSSSITLTKVLHADAAYTKLPPRVRTARQQEHERDSISLLNDRIRWDHAKRDQSMPLRPV 897
SSS + L V A K P R R + + E DSISLLN+RIR D KR+ + RP
Sbjct: 39 SSSLLPLVAVSSLSATAAK-PTRWRE-KPELAESDSISLLNERIRRDLGKRETA---RPA 93
Query: 896 MDSEEADKYIQLVKEQQQRGLQKLKNDRAKHGAPHDSAQPTFSYKVDPYTLRSGDYVVHR 717
MDSEEA+KYI +VKEQQ+RGLQKLK R A D A FSYKVDPY+L SGDYVVH+
Sbjct: 94 MDSEEAEKYIHMVKEQQERGLQKLKGIRQGTKAAGDGA---FSYKVDPYSLLSGDYVVHK 150
Query: 716 KVGIGRFVGIKFDVPKDSKEPIEYVFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTL 537
KVGIGRFVGIKFDVPKDS EP+EYVFIEYADGMAKLP+KQASRLLYRYNLPNETKRPRTL
Sbjct: 151 KVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTL 210
Query: 536 SKLSDTSAWERRRKKGKVAVQKMVVDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPT 357
S+LSDTS WERR+ KGKVA+QKMVVDLM+LYLHRL+QKR PYPK MA+FA+QFP+ T
Sbjct: 211 SRLSDTSVWERRKTKGKVAIQKMVVDLMELYLHRLRQKRYPYPKNPIMADFAAQFPYNAT 270
Query: 356 PDQKQAFLDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 177
PDQKQAFLDVE+DLTERE PMDRLICGDVGFGKTEVALRAIFCVVS GKQAMVLAPTIVL
Sbjct: 271 PDQKQAFLDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSTGKQAMVLAPTIVL 330
Query: 176 AKQHFDVV 153
AKQH+DV+
Sbjct: 331 AKQHYDVI 338
Score = 70.9 bits (172), Expect(2) = e-135
Identities = 33/43 (76%), Positives = 40/43 (93%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKEEYL +IK GH++I+VGTHSLLG+RV Y+NLGLLVVDEEQ
Sbjct: 360 AEKEEYLEMIKTGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 402
>ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arabidopsis lyrata subsp.
lyrata] gi|297330086|gb|EFH60505.1| hypothetical protein
ARALYDRAFT_477305 [Arabidopsis lyrata subsp. lyrata]
Length = 823
Score = 436 bits (1120), Expect(2) = e-135
Identities = 235/333 (70%), Positives = 260/333 (78%)
Frame = -2
Query: 1151 LLFSPSPAPEGFRLSKLFPTTQNPHSSSSITLTKVLHADAAYTKLPPRVRTARQQEHERD 972
L+F P RL L SSS + V A K P R R + + E D
Sbjct: 15 LVFKLCSFPPPRRLFSLRLRRFTRKSSSILPFVAVSSLSATAAK-PTRWRE-KPELAESD 72
Query: 971 SISLLNDRIRWDHAKRDQSMPLRPVMDSEEADKYIQLVKEQQQRGLQKLKNDRAKHGAPH 792
SISLLN+RIR D KR+ + RP MDSEE +KYIQ+VKEQQ+RGLQKLK R A
Sbjct: 73 SISLLNERIRRDIGKRETA---RPAMDSEETEKYIQMVKEQQERGLQKLKGIRQGTEAAG 129
Query: 791 DSAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEYVFIEYADGMAK 612
FSYKVDPY+L SGDYVVH+KVGIGRFVGIKFDVPKDS EP+EYVFIEYADGMAK
Sbjct: 130 TGG---FSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMAK 186
Query: 611 LPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRKKGKVAVQKMVVDLMQLYLHRL 432
LP+KQASRLLYRYNLPNETKRPRTLS+LSDTS WERR+ KGKVA+QKMVVDLM+LYLHRL
Sbjct: 187 LPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMELYLHRL 246
Query: 431 KQKRPPYPKTLAMAEFASQFPFEPTPDQKQAFLDVERDLTERENPMDRLICGDVGFGKTE 252
+QKR PYPK MA+FA+QFP+ TPDQKQAFLDVE+DLTERE PMDRLICGDVGFGKTE
Sbjct: 247 RQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVEKDLTERETPMDRLICGDVGFGKTE 306
Query: 251 VALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVV 153
VALRAIFCVVSAGKQAMVLAPTIVLAKQH+DV+
Sbjct: 307 VALRAIFCVVSAGKQAMVLAPTIVLAKQHYDVI 339
Score = 73.6 bits (179), Expect(2) = e-135
Identities = 34/43 (79%), Positives = 41/43 (95%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKEEYL +IKDGH++I+VGTHSLLG+RV Y+NLGLLVVDEEQ
Sbjct: 361 AEKEEYLEMIKDGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 403
>gb|AAK43897.1|AF370520_1 putative helicase [Arabidopsis thaliana]
Length = 823
Score = 437 bits (1124), Expect(2) = e-134
Identities = 231/308 (75%), Positives = 254/308 (82%)
Frame = -2
Query: 1076 SSSSITLTKVLHADAAYTKLPPRVRTARQQEHERDSISLLNDRIRWDHAKRDQSMPLRPV 897
SSS + L V A K P R R + + E DSISLLN+RIR D KR+ + RP
Sbjct: 40 SSSLLPLVAVSSLSATAAK-PTRWRE-KPELAESDSISLLNERIRRDLGKRETA---RPA 94
Query: 896 MDSEEADKYIQLVKEQQQRGLQKLKNDRAKHGAPHDSAQPTFSYKVDPYTLRSGDYVVHR 717
MDSEEA+KYI +VKEQQ+RGLQKLK R A D A FSYKVDPY+L SGDYVVH+
Sbjct: 95 MDSEEAEKYIHMVKEQQERGLQKLKGIRQGTKAAGDGA---FSYKVDPYSLLSGDYVVHK 151
Query: 716 KVGIGRFVGIKFDVPKDSKEPIEYVFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTL 537
KVGIGRFVGIKFDVPKDS EP+EYVFIEYADGMAKLP+KQASRLLYRYNLPNETKRPRTL
Sbjct: 152 KVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTL 211
Query: 536 SKLSDTSAWERRRKKGKVAVQKMVVDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPT 357
S+LSDTS WERR+ KGKVA+QKMVVDLM LYLHRL+QKR PYPK MA+FA+QFP+ T
Sbjct: 212 SRLSDTSVWERRKTKGKVAIQKMVVDLMGLYLHRLRQKRYPYPKNPIMADFAAQFPYNAT 271
Query: 356 PDQKQAFLDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 177
PDQKQAFLDVE+DLTERE PMDRLICGDVGFGKTEVALRAIFCVVS GKQAMVLAPTIVL
Sbjct: 272 PDQKQAFLDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSTGKQAMVLAPTIVL 331
Query: 176 AKQHFDVV 153
AKQH+DV+
Sbjct: 332 AKQHYDVI 339
Score = 70.9 bits (172), Expect(2) = e-134
Identities = 33/43 (76%), Positives = 40/43 (93%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKEEYL +IK GH++I+VGTHSLLG+RV Y+NLGLLVVDEEQ
Sbjct: 361 AEKEEYLEMIKTGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 403
>gb|AAN72199.1| putative helicase [Arabidopsis thaliana]
Length = 822
Score = 437 bits (1124), Expect(2) = e-134
Identities = 231/308 (75%), Positives = 254/308 (82%)
Frame = -2
Query: 1076 SSSSITLTKVLHADAAYTKLPPRVRTARQQEHERDSISLLNDRIRWDHAKRDQSMPLRPV 897
SSS + L V A K P R R + + E DSISLLN+RIR D KR+ + RP
Sbjct: 39 SSSLLPLVAVSSLSATAAK-PTRWRE-KPELAESDSISLLNERIRRDLGKRETA---RPA 93
Query: 896 MDSEEADKYIQLVKEQQQRGLQKLKNDRAKHGAPHDSAQPTFSYKVDPYTLRSGDYVVHR 717
MDSEEA+KYI +VKEQQ+RGLQKLK R A D A FSYKVDPY+L SGDYVVH+
Sbjct: 94 MDSEEAEKYIHMVKEQQERGLQKLKGIRQGTKAAGDGA---FSYKVDPYSLLSGDYVVHK 150
Query: 716 KVGIGRFVGIKFDVPKDSKEPIEYVFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTL 537
KVGIGRFVGIKFDVPKDS EP+EYVFIEYADGMAKLP+KQASRLLYRYNLPNETKRPRTL
Sbjct: 151 KVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTL 210
Query: 536 SKLSDTSAWERRRKKGKVAVQKMVVDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPT 357
S+LSDTS WERR+ KGKVA+QKMVVDLM LYLHRL+QKR PYPK MA+FA+QFP+ T
Sbjct: 211 SRLSDTSVWERRKTKGKVAIQKMVVDLMGLYLHRLRQKRYPYPKNPIMADFAAQFPYNAT 270
Query: 356 PDQKQAFLDVERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 177
PDQKQAFLDVE+DLTERE PMDRLICGDVGFGKTEVALRAIFCVVS GKQAMVLAPTIVL
Sbjct: 271 PDQKQAFLDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSTGKQAMVLAPTIVL 330
Query: 176 AKQHFDVV 153
AKQH+DV+
Sbjct: 331 AKQHYDVI 338
Score = 70.9 bits (172), Expect(2) = e-134
Identities = 33/43 (76%), Positives = 40/43 (93%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKEEYL +IK GH++I+VGTHSLLG+RV Y+NLGLLVVDEEQ
Sbjct: 360 AEKEEYLEMIKTGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 402
>ref|XP_004493106.1| PREDICTED: transcription-repair-coupling factor-like [Cicer
arietinum]
Length = 823
Score = 429 bits (1103), Expect(2) = e-132
Identities = 219/298 (73%), Positives = 252/298 (84%)
Frame = -2
Query: 1046 LHADAAYTKLPPRVRTARQQEHERDSISLLNDRIRWDHAKRDQSMPLRPVMDSEEADKYI 867
++ YT P +T + + E D IS+LN+RIR ++ KR+ S R VMD+EEADKYI
Sbjct: 53 VYTQGLYTPSSPSKKTDKI-DPENDPISILNERIRREYGKREVS---RTVMDTEEADKYI 108
Query: 866 QLVKEQQQRGLQKLKNDRAKHGAPHDSAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGI 687
Q+VKEQQQRGLQKLK DR + +FSYKVDPYTLRSGDYVVH+KVGIGRFVGI
Sbjct: 109 QMVKEQQQRGLQKLKGDR-------EGKDGSFSYKVDPYTLRSGDYVVHKKVGIGRFVGI 161
Query: 686 KFDVPKDSKEPIEYVFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWE 507
KFDV S EP EYVFIEYADGMAKLPVKQAS++LYRY+LPNE K+PRTLSKL+DTSAWE
Sbjct: 162 KFDVSMKSVEPTEYVFIEYADGMAKLPVKQASKMLYRYSLPNENKKPRTLSKLNDTSAWE 221
Query: 506 RRRKKGKVAVQKMVVDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPTPDQKQAFLDV 327
+R+ KGKVA+QKMVVDLM+LYLHRLKQ+RPPYPK+ A+AEFA+QF ++PTPDQKQAF+DV
Sbjct: 222 KRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKSHAVAEFAAQFLYQPTPDQKQAFVDV 281
Query: 326 ERDLTERENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVV 153
E+DLTERE PMDRLICGDVGFGKTEVALRAI CVVSA KQAMVLAPTIVLAKQHFDV+
Sbjct: 282 EKDLTERETPMDRLICGDVGFGKTEVALRAIQCVVSAKKQAMVLAPTIVLAKQHFDVI 339
Score = 72.0 bits (175), Expect(2) = e-132
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
SEKE YL +IK G +DI+VGTHSLLGNRV YNNLGLLVVDEEQ
Sbjct: 361 SEKEGYLEMIKSGDLDIIVGTHSLLGNRVVYNNLGLLVVDEEQ 403
>gb|EXB41421.1| Transcription-repair-coupling factor [Morus notabilis]
Length = 816
Score = 424 bits (1091), Expect(2) = e-131
Identities = 210/290 (72%), Positives = 243/290 (83%), Gaps = 5/290 (1%)
Frame = -2
Query: 1007 VRTARQQEHERDSISLLNDRIRWDHAKRDQSMPLRPVMDSEEADKYIQLVKEQQQRGLQK 828
V ++ + D IS LN+RIR DH++RD S R V D++EADKYI++VK+QQQRGLQ
Sbjct: 72 VSVSKSFHSDEDDISALNERIRRDHSQRDDSSRSRSV-DAQEADKYIRMVKQQQQRGLQI 130
Query: 827 LKNDRAKHGAPHDSAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDS----- 663
LK + + +FSYKVDPY+LRSGDYVVHRKVG+GRFVGIKFD+PK
Sbjct: 131 LKRRAGAEKPDQNEKEKSFSYKVDPYSLRSGDYVVHRKVGVGRFVGIKFDIPKGKGKGGG 190
Query: 662 KEPIEYVFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRKKGKV 483
EP+EYVFIEY+DGMAKLP+ QASRLLYRYNLPNE+K+PRTLSKLSDTS WE+R+ KGK+
Sbjct: 191 SEPVEYVFIEYSDGMAKLPLSQASRLLYRYNLPNESKKPRTLSKLSDTSVWEKRKTKGKL 250
Query: 482 AVQKMVVDLMQLYLHRLKQKRPPYPKTLAMAEFASQFPFEPTPDQKQAFLDVERDLTERE 303
A+QKMVVDLM+LYLHRLKQ RPPYPKT MA+FA+QFP+EPTPDQKQAF+DVE+DLTER
Sbjct: 251 AIQKMVVDLMELYLHRLKQTRPPYPKTPDMADFAAQFPYEPTPDQKQAFIDVEKDLTERH 310
Query: 302 NPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVV 153
PMDRLICGDVGFGKTEVALRAIFCVVSA KQAMVLAPTIVLAKQHFDV+
Sbjct: 311 TPMDRLICGDVGFGKTEVALRAIFCVVSAAKQAMVLAPTIVLAKQHFDVI 360
Score = 73.6 bits (179), Expect(2) = e-131
Identities = 34/43 (79%), Positives = 41/43 (95%)
Frame = -1
Query: 129 SEKEEYLSVIKDGHVDIMVGTHSLLGNRVEYNNLGLLVVDEEQ 1
+EKEE+L +IK+GH+DI+VGTHSLLG+RV YNNLGLLVVDEEQ
Sbjct: 382 AEKEEHLDMIKNGHLDIIVGTHSLLGSRVVYNNLGLLVVDEEQ 424