BLASTX nr result

ID: Atropa21_contig00013008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00013008
         (494 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354642.1| PREDICTED: suppressor protein SRP40-like [So...   176   4e-42
ref|XP_004229712.1| PREDICTED: uncharacterized protein LOC101247...   166   3e-39

>ref|XP_006354642.1| PREDICTED: suppressor protein SRP40-like [Solanum tuberosum]
          Length = 501

 Score =  176 bits (445), Expect = 4e-42
 Identities = 99/161 (61%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
 Frame = -3

Query: 456 RPKRSKLKFSSLLCGGASTSHSDLQLEDYSQNLLGSSVENQPLVGDFSRNXXXXXXXXXX 277
           RPKRSKLKFSS  CGGASTS  D +LEDY Q          PLVGDFSRN          
Sbjct: 28  RPKRSKLKFSSFFCGGASTSQLDHELEDYPQ----------PLVGDFSRNSIAESSSTFS 77

Query: 276 XXVGHATEPXXXXXXXXXXGLIQDAFVEYNLINAEVNINSTCLLNDKHSVCDQARGSLPA 97
             VGHAT+P          GL  DAFVEYNLINAEVNIN+TC+ N+KHS+CDQAR SL A
Sbjct: 78  SEVGHATQPETGSSSESTSGLSHDAFVEYNLINAEVNINNTCISNEKHSICDQARDSLAA 137

Query: 96  AVSTESLTCLNTEDSHS---------SHGDSMENHRDVHIE 1
           AVSTESLT LNTEDSH+         SHGDS+ENH DVHIE
Sbjct: 138 AVSTESLTHLNTEDSHTVPEECRSSCSHGDSIENHGDVHIE 178


>ref|XP_004229712.1| PREDICTED: uncharacterized protein LOC101247366 [Solanum
           lycopersicum]
          Length = 492

 Score =  166 bits (420), Expect = 3e-39
 Identities = 95/161 (59%), Positives = 102/161 (63%), Gaps = 9/161 (5%)
 Frame = -3

Query: 456 RPKRSKLKFSSLLCGGASTSHSDLQLEDYSQNLLGSSVENQPLVGDFSRNXXXXXXXXXX 277
           RPKRSKLK SS  CGGASTS  D +LEDY Q          PLVGDFSRN          
Sbjct: 19  RPKRSKLKLSSFFCGGASTSQLDHELEDYPQ----------PLVGDFSRNSIAESSSTFS 68

Query: 276 XXVGHATEPXXXXXXXXXXGLIQDAFVEYNLINAEVNINSTCLLNDKHSVCDQARGSLPA 97
             VGHAT+P           L  DAFVEYNL NAEVNIN+TC+ N+KHS+ DQAR SL A
Sbjct: 69  SEVGHATQPETESSSESTSNLSHDAFVEYNLTNAEVNINNTCISNEKHSISDQARDSLAA 128

Query: 96  AVSTESLTCLNTEDSHS---------SHGDSMENHRDVHIE 1
           AVSTESLT LNTEDSH+         S GDSMENH DVHIE
Sbjct: 129 AVSTESLTRLNTEDSHTVPEECRSSCSQGDSMENHGDVHIE 169


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