BLASTX nr result

ID: Atropa21_contig00011901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00011901
         (796 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicoti...   286   4e-75
ref|XP_004246445.1| PREDICTED: DNA-directed RNA polymerases I, I...   281   1e-73
ref|XP_006341053.1| PREDICTED: DNA-directed RNA polymerases II a...   280   4e-73
ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Popu...   235   2e-59
ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I...   231   2e-58
gb|EMJ05946.1| hypothetical protein PRUPE_ppa013037mg [Prunus pe...   231   3e-58
ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, I...   230   4e-58
ref|XP_004140788.1| PREDICTED: DNA-directed RNA polymerases I, I...   230   5e-58
gb|ESW14698.1| hypothetical protein PHAVU_007G009900g [Phaseolus...   229   1e-57
gb|EMJ00137.1| hypothetical protein PRUPE_ppa013019mg [Prunus pe...   229   1e-57
ref|XP_002322450.1| DNA-directed RNA polymerase II family protei...   228   2e-57
gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subun...   228   2e-57
gb|EAY90802.1| hypothetical protein OsI_12404 [Oryza sativa Indi...   227   3e-57
ref|XP_004290539.1| PREDICTED: DNA-directed RNA polymerases I, I...   227   4e-57
ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, ...   226   7e-57
ref|XP_004136357.1| PREDICTED: DNA-directed RNA polymerases I, I...   224   2e-56
ref|NP_001050570.1| Os03g0586600 [Oryza sativa Japonica Group] g...   224   2e-56
ref|XP_006657672.1| PREDICTED: DNA-directed RNA polymerases II, ...   224   3e-56
ref|XP_006650303.1| PREDICTED: DNA-directed RNA polymerases II, ...   224   3e-56
gb|AFK33543.1| unknown [Lotus japonicus]                              224   3e-56

>gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
           gi|4960152|gb|AAD34614.1|AF153278_1 DNA-directed RNA
           polymerase IIb [Nicotiana tabacum]
          Length = 143

 Score =  286 bits (733), Expect = 4e-75
 Identities = 138/143 (96%), Positives = 141/143 (98%)
 Frame = +1

Query: 70  MADEDYDMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRKT 249
           MAD+DYDMDGGYVDEPI+PEPDEGAEIEEDNGN EDIPDPLLGE EEKTEQEPVERPRKT
Sbjct: 1   MADDDYDMDGGYVDEPIEPEPDEGAEIEEDNGNNEDIPDPLLGEGEEKTEQEPVERPRKT 60

Query: 250 SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 429
           SK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 61  SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 120

Query: 430 SYEDWGVDELIVEDSWKRQVGGT 498
           SYEDWGVDELIVEDSWKRQVGGT
Sbjct: 121 SYEDWGVDELIVEDSWKRQVGGT 143


>ref|XP_004246445.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Solanum lycopersicum]
          Length = 144

 Score =  281 bits (720), Expect = 1e-73
 Identities = 137/144 (95%), Positives = 141/144 (97%), Gaps = 1/144 (0%)
 Frame = +1

Query: 70  MADEDYDMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQ-EPVERPRK 246
           MAD+DYDMDGGYVDEP+DPEPDEGAEIEEDNGN +DIPDPL+GE EEKTEQ EPVERPRK
Sbjct: 1   MADDDYDMDGGYVDEPMDPEPDEGAEIEEDNGNNDDIPDPLMGEGEEKTEQQEPVERPRK 60

Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
           TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 61  TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 120

Query: 427 GSYEDWGVDELIVEDSWKRQVGGT 498
           GSYEDWGVDELIVEDSWKRQVGGT
Sbjct: 121 GSYEDWGVDELIVEDSWKRQVGGT 144


>ref|XP_006341053.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           [Solanum tuberosum]
          Length = 144

 Score =  280 bits (716), Expect = 4e-73
 Identities = 136/144 (94%), Positives = 140/144 (97%), Gaps = 1/144 (0%)
 Frame = +1

Query: 70  MADEDYDMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQ-EPVERPRK 246
           MAD+DYDMDGGYVDEP+DPEPDEGAEIEEDNGN ED+PDPL+GE EEK EQ EPVERPRK
Sbjct: 1   MADDDYDMDGGYVDEPMDPEPDEGAEIEEDNGNNEDVPDPLMGEGEEKPEQQEPVERPRK 60

Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
           TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 61  TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 120

Query: 427 GSYEDWGVDELIVEDSWKRQVGGT 498
           GSYEDWGVDELIVEDSWKRQVGGT
Sbjct: 121 GSYEDWGVDELIVEDSWKRQVGGT 144


>ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Populus trichocarpa]
           gi|550327061|gb|EEE96460.2| hypothetical protein
           POPTR_0012s13610g [Populus trichocarpa]
          Length = 183

 Score =  235 bits (599), Expect = 2e-59
 Identities = 122/150 (81%), Positives = 131/150 (87%), Gaps = 2/150 (1%)
 Frame = +1

Query: 52  ILQVTTMADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIP-DPLLGEAEEKTEQE 225
           +LQ + MADEDY D+D GY DEP +PE +EG E + DN N ED   +P+  E E+K EQE
Sbjct: 35  LLQESIMADEDYNDVDMGYEDEPPEPEIEEGVEEDADNDNNEDDKGEPI--ETEDKEEQE 92

Query: 226 PVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 405
           PVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 93  PVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 152

Query: 406 IRRYLPDGSYEDWGVDELIVEDSWKRQVGG 495
           IRRYLPDGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 153 IRRYLPDGSYEDWGVDELIVEDSWKRQVGG 182


>ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 isoform 1 [Vitis vinifera]
           gi|297741100|emb|CBI31831.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  231 bits (590), Expect = 2e-58
 Identities = 118/143 (82%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
           MADE+Y D+D GY DEP +PE +EGAE E +N N ED+PD L  E +EK   E VERPRK
Sbjct: 1   MADEEYNDVDMGYEDEPPEPEIEEGAEEEAENNNNEDVPDAL--EEQEKEVHETVERPRK 58

Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
           TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 59  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 118

Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
           GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGG 141


>gb|EMJ05946.1| hypothetical protein PRUPE_ppa013037mg [Prunus persica]
          Length = 143

 Score =  231 bits (588), Expect = 3e-58
 Identities = 119/143 (83%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
           MADEDY DMD GY DEP +PE +EGAE + DN N +D+P   + EAE+K EQ  VE PRK
Sbjct: 1   MADEDYNDMDMGYEDEPPEPEIEEGAEEDVDNINNDDLPGDAI-EAEDKEEQAQVEGPRK 59

Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
           TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 60  TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 119

Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
           GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGG 142


>ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 [Vitis vinifera] gi|302143496|emb|CBI22057.3|
           unnamed protein product [Vitis vinifera]
          Length = 141

 Score =  230 bits (587), Expect = 4e-58
 Identities = 120/143 (83%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
           MAD+DY DMD GY DEP +PE +EGAE + DN N EDIPD +  E  EK EQ PVER RK
Sbjct: 1   MADDDYNDMDMGYEDEPPEPEIEEGAEEDADNNNNEDIPDAI--ETAEK-EQVPVERSRK 57

Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
           TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 58  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 117

Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
           GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 118 GSYEDWGVDELIVEDSWKRQVGG 140


>ref|XP_004140788.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Cucumis sativus]
           gi|449485538|ref|XP_004157202.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC2-like
           [Cucumis sativus]
          Length = 143

 Score =  230 bits (586), Expect = 5e-58
 Identities = 118/144 (81%), Positives = 129/144 (89%), Gaps = 2/144 (1%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIP-DPLLGEAEEKTEQEPVERPR 243
           MAD+DY D+D GY DEP +PE +EGAE E +N N +DIP +P+  EAEEK ++EP+ R R
Sbjct: 1   MADDDYNDLDMGYEDEPPEPEIEEGAEEELENNNNDDIPGEPV--EAEEKEDEEPIVRAR 58

Query: 244 KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 423
           KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 59  KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 118

Query: 424 DGSYEDWGVDELIVEDSWKRQVGG 495
           DGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGG 142


>gb|ESW14698.1| hypothetical protein PHAVU_007G009900g [Phaseolus vulgaris]
           gi|561015895|gb|ESW14699.1| hypothetical protein
           PHAVU_007G009900g [Phaseolus vulgaris]
          Length = 141

 Score =  229 bits (583), Expect = 1e-57
 Identities = 115/142 (80%), Positives = 127/142 (89%), Gaps = 1/142 (0%)
 Frame = +1

Query: 70  MADEDYD-MDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
           MADEDYD MD GY DEPI+PE +EGAE + +N N E + D +  + E+K E++PVERPRK
Sbjct: 1   MADEDYDDMDMGYEDEPIEPEIEEGAEEDVENKNDEMVGDAI--DTEDKEEEQPVERPRK 58

Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
           TSK+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 59  TSKYMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 118

Query: 427 GSYEDWGVDELIVEDSWKRQVG 492
           GSYEDWGVDELIVEDSWKRQVG
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVG 140


>gb|EMJ00137.1| hypothetical protein PRUPE_ppa013019mg [Prunus persica]
          Length = 144

 Score =  229 bits (583), Expect = 1e-57
 Identities = 114/144 (79%), Positives = 130/144 (90%), Gaps = 2/144 (1%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIEE-DNGNPEDIPDPLLGEAEEKTEQEPVERPR 243
           MAD+DY +MD GY DEP++PE +EGAE E+ +N N +D+P   + EA++K EQ PVERPR
Sbjct: 1   MADDDYNEMDMGYEDEPVEPEIEEGAEEEDVENANNDDLPGEAV-EADDKEEQAPVERPR 59

Query: 244 KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 423
           +TSKFMTKYERARILGTRA+QISMNAPVMVEL+GETDPLEIAMKELRERK+PFTIRRYLP
Sbjct: 60  RTSKFMTKYERARILGTRAVQISMNAPVMVELQGETDPLEIAMKELRERKVPFTIRRYLP 119

Query: 424 DGSYEDWGVDELIVEDSWKRQVGG 495
           DGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 DGSYEDWGVDELIVEDSWKRQVGG 143


>ref|XP_002322450.1| DNA-directed RNA polymerase II family protein [Populus trichocarpa]
           gi|222869446|gb|EEF06577.1| DNA-directed RNA polymerase
           II family protein [Populus trichocarpa]
          Length = 143

 Score =  228 bits (581), Expect = 2e-57
 Identities = 116/144 (80%), Positives = 128/144 (88%), Gaps = 2/144 (1%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIE-EDNGNPEDIPDPLLGEAEEKTEQEPVERPR 243
           MAD++Y D+D GY DEP +PE +EGA+ + E+N N +D  +P+  E E+K EQ PVERPR
Sbjct: 1   MADDEYNDVDMGYEDEPAEPEIEEGADEDAENNNNEDDTGEPI--ETEDKEEQAPVERPR 58

Query: 244 KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 423
           KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 59  KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 118

Query: 424 DGSYEDWGVDELIVEDSWKRQVGG 495
           DGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGG 142


>gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Morus
           notabilis]
          Length = 143

 Score =  228 bits (580), Expect = 2e-57
 Identities = 116/144 (80%), Positives = 128/144 (88%), Gaps = 2/144 (1%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIP-DPLLGEAEEKTEQEPVERPR 243
           MAD+DY +MD GY DEP +PE +EGAE + DN N +D   +P+  EAE+K ++EPVE PR
Sbjct: 1   MADDDYTEMDMGYEDEPPEPEIEEGAEEDVDNNNNDDTGGEPI--EAEDKADEEPVEHPR 58

Query: 244 KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 423
           KTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 59  KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 118

Query: 424 DGSYEDWGVDELIVEDSWKRQVGG 495
           DGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGG 142


>gb|EAY90802.1| hypothetical protein OsI_12404 [Oryza sativa Indica Group]
          Length = 143

 Score =  227 bits (579), Expect = 3e-57
 Identities = 116/143 (81%), Positives = 124/143 (86%), Gaps = 1/143 (0%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
           MAD+DY DMD GY DEP +PE +EGAE E +N N ED PD ++G   E  EQE  +RPRK
Sbjct: 1   MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENNN-EDGPDEVVGAEAEDKEQEKTQRPRK 59

Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
           TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 60  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 119

Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
           GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGG 142


>ref|XP_004290539.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Fragaria vesca subsp. vesca]
          Length = 142

 Score =  227 bits (578), Expect = 4e-57
 Identities = 116/143 (81%), Positives = 127/143 (88%), Gaps = 1/143 (0%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
           MAD+DY +MD GY DEP++PE +EGAE EED  N +D+    + E ++K EQ PVERPRK
Sbjct: 1   MADDDYNEMDIGYEDEPVEPEMEEGAE-EEDLDNNDDMAGDAI-ETDDKEEQAPVERPRK 58

Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
           TSKFMTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 59  TSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 118

Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
           GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGG 141


>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Glycine max]
          Length = 142

 Score =  226 bits (576), Expect = 7e-57
 Identities = 114/143 (79%), Positives = 127/143 (88%), Gaps = 1/143 (0%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
           MAD+DY D+D GY DEP +PE +EGAE + +N N E   +P+  + E+K E++PVERPRK
Sbjct: 1   MADDDYEDIDMGYEDEPPEPEIEEGAEEDLENKNDELTGEPI--DTEDKEEEQPVERPRK 58

Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
           TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 59  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 118

Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
           GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGG 141


>ref|XP_004136357.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Cucumis sativus]
          Length = 142

 Score =  224 bits (572), Expect = 2e-56
 Identities = 118/144 (81%), Positives = 128/144 (88%), Gaps = 2/144 (1%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIP-DPLLGEAEEKTEQEPVERPR 243
           MAD+DY D+D GY DEP +PE +EGAE E D  N +D+P +P+  EAE K ++EPVER R
Sbjct: 1   MADDDYNDLDMGYEDEPPEPEIEEGAEEELDT-NTDDVPGEPV--EAEGKEDEEPVERVR 57

Query: 244 KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 423
           KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 58  KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 117

Query: 424 DGSYEDWGVDELIVEDSWKRQVGG 495
           DGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVGG 141


>ref|NP_001050570.1| Os03g0586600 [Oryza sativa Japonica Group]
           gi|50399946|gb|AAT76334.1| putative DNA-directed RNA
           polymerase II subunit [Oryza sativa Japonica Group]
           gi|108709558|gb|ABF97353.1| DNA-directed RNA polymerases
           I, II, and III 14.4 kDa polypeptide, putative, expressed
           [Oryza sativa Japonica Group]
           gi|113549041|dbj|BAF12484.1| Os03g0586600 [Oryza sativa
           Japonica Group] gi|125586969|gb|EAZ27633.1| hypothetical
           protein OsJ_11577 [Oryza sativa Japonica Group]
           gi|215678566|dbj|BAG92221.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 142

 Score =  224 bits (572), Expect = 2e-56
 Identities = 115/143 (80%), Positives = 123/143 (86%), Gaps = 1/143 (0%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
           MAD+DY DMD GY DEP +PE +EGAE E +N   ED PD ++G   E  EQE  +RPRK
Sbjct: 1   MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENN--EDGPDEVVGAEAEDKEQEKTQRPRK 58

Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
           TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 59  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 118

Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
           GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGG 141


>ref|XP_006657672.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Oryza brachyantha]
          Length = 143

 Score =  224 bits (571), Expect = 3e-56
 Identities = 114/143 (79%), Positives = 123/143 (86%), Gaps = 1/143 (0%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
           MAD+DY DMD GY DEP +PE +EGAE+E +N N ED  D ++G   +  EQE   RPRK
Sbjct: 1   MADDDYNDMDMGYEDEPPEPEIEEGAELEPENNN-EDAVDDVVGAEVDDKEQEKTARPRK 59

Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
           TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 60  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 119

Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
           GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGG 142


>ref|XP_006650303.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Oryza brachyantha]
          Length = 143

 Score =  224 bits (571), Expect = 3e-56
 Identities = 114/143 (79%), Positives = 124/143 (86%), Gaps = 1/143 (0%)
 Frame = +1

Query: 70  MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
           MAD+DY D+D GY DEP +PE +EGAE E +N N ED PD +LG   E  EQ+  +RPRK
Sbjct: 1   MADDDYNDVDMGYEDEPPEPEIEEGAEEELENNN-EDAPDDVLGAEAEDKEQDKTQRPRK 59

Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
           TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 60  TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 119

Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
           GSYEDWGV+ELIVEDSWKRQVGG
Sbjct: 120 GSYEDWGVNELIVEDSWKRQVGG 142


>gb|AFK33543.1| unknown [Lotus japonicus]
          Length = 144

 Score =  224 bits (571), Expect = 3e-56
 Identities = 114/143 (79%), Positives = 124/143 (86%), Gaps = 1/143 (0%)
 Frame = +1

Query: 70  MADEDYD-MDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
           MADEDYD +D GY DEP++PE +EGAE + +N N E+       E EEK E +PV+RPRK
Sbjct: 1   MADEDYDDVDMGYEDEPVEPEIEEGAEEDLENKNEEEENGGEPLETEEKEEVQPVQRPRK 60

Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
           TSK+MTKYERARILGTRALQISMNAPVMVEL GETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 61  TSKYMTKYERARILGTRALQISMNAPVMVELAGETDPLEIAMKELRERKIPFTIRRYLPD 120

Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
           GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 121 GSYEDWGVDELIVEDSWKRQVGG 143


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