BLASTX nr result
ID: Atropa21_contig00011901
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00011901
(796 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicoti... 286 4e-75
ref|XP_004246445.1| PREDICTED: DNA-directed RNA polymerases I, I... 281 1e-73
ref|XP_006341053.1| PREDICTED: DNA-directed RNA polymerases II a... 280 4e-73
ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Popu... 235 2e-59
ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I... 231 2e-58
gb|EMJ05946.1| hypothetical protein PRUPE_ppa013037mg [Prunus pe... 231 3e-58
ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, I... 230 4e-58
ref|XP_004140788.1| PREDICTED: DNA-directed RNA polymerases I, I... 230 5e-58
gb|ESW14698.1| hypothetical protein PHAVU_007G009900g [Phaseolus... 229 1e-57
gb|EMJ00137.1| hypothetical protein PRUPE_ppa013019mg [Prunus pe... 229 1e-57
ref|XP_002322450.1| DNA-directed RNA polymerase II family protei... 228 2e-57
gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subun... 228 2e-57
gb|EAY90802.1| hypothetical protein OsI_12404 [Oryza sativa Indi... 227 3e-57
ref|XP_004290539.1| PREDICTED: DNA-directed RNA polymerases I, I... 227 4e-57
ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, ... 226 7e-57
ref|XP_004136357.1| PREDICTED: DNA-directed RNA polymerases I, I... 224 2e-56
ref|NP_001050570.1| Os03g0586600 [Oryza sativa Japonica Group] g... 224 2e-56
ref|XP_006657672.1| PREDICTED: DNA-directed RNA polymerases II, ... 224 3e-56
ref|XP_006650303.1| PREDICTED: DNA-directed RNA polymerases II, ... 224 3e-56
gb|AFK33543.1| unknown [Lotus japonicus] 224 3e-56
>gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
gi|4960152|gb|AAD34614.1|AF153278_1 DNA-directed RNA
polymerase IIb [Nicotiana tabacum]
Length = 143
Score = 286 bits (733), Expect = 4e-75
Identities = 138/143 (96%), Positives = 141/143 (98%)
Frame = +1
Query: 70 MADEDYDMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRKT 249
MAD+DYDMDGGYVDEPI+PEPDEGAEIEEDNGN EDIPDPLLGE EEKTEQEPVERPRKT
Sbjct: 1 MADDDYDMDGGYVDEPIEPEPDEGAEIEEDNGNNEDIPDPLLGEGEEKTEQEPVERPRKT 60
Query: 250 SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 429
SK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 61 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 120
Query: 430 SYEDWGVDELIVEDSWKRQVGGT 498
SYEDWGVDELIVEDSWKRQVGGT
Sbjct: 121 SYEDWGVDELIVEDSWKRQVGGT 143
>ref|XP_004246445.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2-like [Solanum lycopersicum]
Length = 144
Score = 281 bits (720), Expect = 1e-73
Identities = 137/144 (95%), Positives = 141/144 (97%), Gaps = 1/144 (0%)
Frame = +1
Query: 70 MADEDYDMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQ-EPVERPRK 246
MAD+DYDMDGGYVDEP+DPEPDEGAEIEEDNGN +DIPDPL+GE EEKTEQ EPVERPRK
Sbjct: 1 MADDDYDMDGGYVDEPMDPEPDEGAEIEEDNGNNDDIPDPLMGEGEEKTEQQEPVERPRK 60
Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 61 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 120
Query: 427 GSYEDWGVDELIVEDSWKRQVGGT 498
GSYEDWGVDELIVEDSWKRQVGGT
Sbjct: 121 GSYEDWGVDELIVEDSWKRQVGGT 144
>ref|XP_006341053.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
[Solanum tuberosum]
Length = 144
Score = 280 bits (716), Expect = 4e-73
Identities = 136/144 (94%), Positives = 140/144 (97%), Gaps = 1/144 (0%)
Frame = +1
Query: 70 MADEDYDMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQ-EPVERPRK 246
MAD+DYDMDGGYVDEP+DPEPDEGAEIEEDNGN ED+PDPL+GE EEK EQ EPVERPRK
Sbjct: 1 MADDDYDMDGGYVDEPMDPEPDEGAEIEEDNGNNEDVPDPLMGEGEEKPEQQEPVERPRK 60
Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 61 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 120
Query: 427 GSYEDWGVDELIVEDSWKRQVGGT 498
GSYEDWGVDELIVEDSWKRQVGGT
Sbjct: 121 GSYEDWGVDELIVEDSWKRQVGGT 144
>ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Populus trichocarpa]
gi|550327061|gb|EEE96460.2| hypothetical protein
POPTR_0012s13610g [Populus trichocarpa]
Length = 183
Score = 235 bits (599), Expect = 2e-59
Identities = 122/150 (81%), Positives = 131/150 (87%), Gaps = 2/150 (1%)
Frame = +1
Query: 52 ILQVTTMADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIP-DPLLGEAEEKTEQE 225
+LQ + MADEDY D+D GY DEP +PE +EG E + DN N ED +P+ E E+K EQE
Sbjct: 35 LLQESIMADEDYNDVDMGYEDEPPEPEIEEGVEEDADNDNNEDDKGEPI--ETEDKEEQE 92
Query: 226 PVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 405
PVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Sbjct: 93 PVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 152
Query: 406 IRRYLPDGSYEDWGVDELIVEDSWKRQVGG 495
IRRYLPDGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 153 IRRYLPDGSYEDWGVDELIVEDSWKRQVGG 182
>ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2 isoform 1 [Vitis vinifera]
gi|297741100|emb|CBI31831.3| unnamed protein product
[Vitis vinifera]
Length = 142
Score = 231 bits (590), Expect = 2e-58
Identities = 118/143 (82%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
MADE+Y D+D GY DEP +PE +EGAE E +N N ED+PD L E +EK E VERPRK
Sbjct: 1 MADEEYNDVDMGYEDEPPEPEIEEGAEEEAENNNNEDVPDAL--EEQEKEVHETVERPRK 58
Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 59 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 118
Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGG 141
>gb|EMJ05946.1| hypothetical protein PRUPE_ppa013037mg [Prunus persica]
Length = 143
Score = 231 bits (588), Expect = 3e-58
Identities = 119/143 (83%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
MADEDY DMD GY DEP +PE +EGAE + DN N +D+P + EAE+K EQ VE PRK
Sbjct: 1 MADEDYNDMDMGYEDEPPEPEIEEGAEEDVDNINNDDLPGDAI-EAEDKEEQAQVEGPRK 59
Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 60 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 119
Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGG 142
>ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2 [Vitis vinifera] gi|302143496|emb|CBI22057.3|
unnamed protein product [Vitis vinifera]
Length = 141
Score = 230 bits (587), Expect = 4e-58
Identities = 120/143 (83%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
MAD+DY DMD GY DEP +PE +EGAE + DN N EDIPD + E EK EQ PVER RK
Sbjct: 1 MADDDYNDMDMGYEDEPPEPEIEEGAEEDADNNNNEDIPDAI--ETAEK-EQVPVERSRK 57
Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 58 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 117
Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 118 GSYEDWGVDELIVEDSWKRQVGG 140
>ref|XP_004140788.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2-like [Cucumis sativus]
gi|449485538|ref|XP_004157202.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC2-like
[Cucumis sativus]
Length = 143
Score = 230 bits (586), Expect = 5e-58
Identities = 118/144 (81%), Positives = 129/144 (89%), Gaps = 2/144 (1%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIP-DPLLGEAEEKTEQEPVERPR 243
MAD+DY D+D GY DEP +PE +EGAE E +N N +DIP +P+ EAEEK ++EP+ R R
Sbjct: 1 MADDDYNDLDMGYEDEPPEPEIEEGAEEELENNNNDDIPGEPV--EAEEKEDEEPIVRAR 58
Query: 244 KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 423
KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 59 KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 118
Query: 424 DGSYEDWGVDELIVEDSWKRQVGG 495
DGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGG 142
>gb|ESW14698.1| hypothetical protein PHAVU_007G009900g [Phaseolus vulgaris]
gi|561015895|gb|ESW14699.1| hypothetical protein
PHAVU_007G009900g [Phaseolus vulgaris]
Length = 141
Score = 229 bits (583), Expect = 1e-57
Identities = 115/142 (80%), Positives = 127/142 (89%), Gaps = 1/142 (0%)
Frame = +1
Query: 70 MADEDYD-MDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
MADEDYD MD GY DEPI+PE +EGAE + +N N E + D + + E+K E++PVERPRK
Sbjct: 1 MADEDYDDMDMGYEDEPIEPEIEEGAEEDVENKNDEMVGDAI--DTEDKEEEQPVERPRK 58
Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
TSK+MTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 59 TSKYMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 118
Query: 427 GSYEDWGVDELIVEDSWKRQVG 492
GSYEDWGVDELIVEDSWKRQVG
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVG 140
>gb|EMJ00137.1| hypothetical protein PRUPE_ppa013019mg [Prunus persica]
Length = 144
Score = 229 bits (583), Expect = 1e-57
Identities = 114/144 (79%), Positives = 130/144 (90%), Gaps = 2/144 (1%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIEE-DNGNPEDIPDPLLGEAEEKTEQEPVERPR 243
MAD+DY +MD GY DEP++PE +EGAE E+ +N N +D+P + EA++K EQ PVERPR
Sbjct: 1 MADDDYNEMDMGYEDEPVEPEIEEGAEEEDVENANNDDLPGEAV-EADDKEEQAPVERPR 59
Query: 244 KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 423
+TSKFMTKYERARILGTRA+QISMNAPVMVEL+GETDPLEIAMKELRERK+PFTIRRYLP
Sbjct: 60 RTSKFMTKYERARILGTRAVQISMNAPVMVELQGETDPLEIAMKELRERKVPFTIRRYLP 119
Query: 424 DGSYEDWGVDELIVEDSWKRQVGG 495
DGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 DGSYEDWGVDELIVEDSWKRQVGG 143
>ref|XP_002322450.1| DNA-directed RNA polymerase II family protein [Populus trichocarpa]
gi|222869446|gb|EEF06577.1| DNA-directed RNA polymerase
II family protein [Populus trichocarpa]
Length = 143
Score = 228 bits (581), Expect = 2e-57
Identities = 116/144 (80%), Positives = 128/144 (88%), Gaps = 2/144 (1%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIE-EDNGNPEDIPDPLLGEAEEKTEQEPVERPR 243
MAD++Y D+D GY DEP +PE +EGA+ + E+N N +D +P+ E E+K EQ PVERPR
Sbjct: 1 MADDEYNDVDMGYEDEPAEPEIEEGADEDAENNNNEDDTGEPI--ETEDKEEQAPVERPR 58
Query: 244 KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 423
KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 59 KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 118
Query: 424 DGSYEDWGVDELIVEDSWKRQVGG 495
DGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGG 142
>gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Morus
notabilis]
Length = 143
Score = 228 bits (580), Expect = 2e-57
Identities = 116/144 (80%), Positives = 128/144 (88%), Gaps = 2/144 (1%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIP-DPLLGEAEEKTEQEPVERPR 243
MAD+DY +MD GY DEP +PE +EGAE + DN N +D +P+ EAE+K ++EPVE PR
Sbjct: 1 MADDDYTEMDMGYEDEPPEPEIEEGAEEDVDNNNNDDTGGEPI--EAEDKADEEPVEHPR 58
Query: 244 KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 423
KTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 59 KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 118
Query: 424 DGSYEDWGVDELIVEDSWKRQVGG 495
DGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGG 142
>gb|EAY90802.1| hypothetical protein OsI_12404 [Oryza sativa Indica Group]
Length = 143
Score = 227 bits (579), Expect = 3e-57
Identities = 116/143 (81%), Positives = 124/143 (86%), Gaps = 1/143 (0%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
MAD+DY DMD GY DEP +PE +EGAE E +N N ED PD ++G E EQE +RPRK
Sbjct: 1 MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENNN-EDGPDEVVGAEAEDKEQEKTQRPRK 59
Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 60 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 119
Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGG 142
>ref|XP_004290539.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2-like [Fragaria vesca subsp. vesca]
Length = 142
Score = 227 bits (578), Expect = 4e-57
Identities = 116/143 (81%), Positives = 127/143 (88%), Gaps = 1/143 (0%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
MAD+DY +MD GY DEP++PE +EGAE EED N +D+ + E ++K EQ PVERPRK
Sbjct: 1 MADDDYNEMDIGYEDEPVEPEMEEGAE-EEDLDNNDDMAGDAI-ETDDKEEQAPVERPRK 58
Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
TSKFMTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 59 TSKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 118
Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGG 141
>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
6A-like [Glycine max]
Length = 142
Score = 226 bits (576), Expect = 7e-57
Identities = 114/143 (79%), Positives = 127/143 (88%), Gaps = 1/143 (0%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
MAD+DY D+D GY DEP +PE +EGAE + +N N E +P+ + E+K E++PVERPRK
Sbjct: 1 MADDDYEDIDMGYEDEPPEPEIEEGAEEDLENKNDELTGEPI--DTEDKEEEQPVERPRK 58
Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 59 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 118
Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGG 141
>ref|XP_004136357.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2-like [Cucumis sativus]
Length = 142
Score = 224 bits (572), Expect = 2e-56
Identities = 118/144 (81%), Positives = 128/144 (88%), Gaps = 2/144 (1%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIP-DPLLGEAEEKTEQEPVERPR 243
MAD+DY D+D GY DEP +PE +EGAE E D N +D+P +P+ EAE K ++EPVER R
Sbjct: 1 MADDDYNDLDMGYEDEPPEPEIEEGAEEELDT-NTDDVPGEPV--EAEGKEDEEPVERVR 57
Query: 244 KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 423
KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 58 KTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 117
Query: 424 DGSYEDWGVDELIVEDSWKRQVGG 495
DGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVGG 141
>ref|NP_001050570.1| Os03g0586600 [Oryza sativa Japonica Group]
gi|50399946|gb|AAT76334.1| putative DNA-directed RNA
polymerase II subunit [Oryza sativa Japonica Group]
gi|108709558|gb|ABF97353.1| DNA-directed RNA polymerases
I, II, and III 14.4 kDa polypeptide, putative, expressed
[Oryza sativa Japonica Group]
gi|113549041|dbj|BAF12484.1| Os03g0586600 [Oryza sativa
Japonica Group] gi|125586969|gb|EAZ27633.1| hypothetical
protein OsJ_11577 [Oryza sativa Japonica Group]
gi|215678566|dbj|BAG92221.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 142
Score = 224 bits (572), Expect = 2e-56
Identities = 115/143 (80%), Positives = 123/143 (86%), Gaps = 1/143 (0%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
MAD+DY DMD GY DEP +PE +EGAE E +N ED PD ++G E EQE +RPRK
Sbjct: 1 MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENN--EDGPDEVVGAEAEDKEQEKTQRPRK 58
Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 59 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 118
Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 GSYEDWGVDELIVEDSWKRQVGG 141
>ref|XP_006657672.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
6A-like [Oryza brachyantha]
Length = 143
Score = 224 bits (571), Expect = 3e-56
Identities = 114/143 (79%), Positives = 123/143 (86%), Gaps = 1/143 (0%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
MAD+DY DMD GY DEP +PE +EGAE+E +N N ED D ++G + EQE RPRK
Sbjct: 1 MADDDYNDMDMGYEDEPPEPEIEEGAELEPENNN-EDAVDDVVGAEVDDKEQEKTARPRK 59
Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 60 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 119
Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 GSYEDWGVDELIVEDSWKRQVGG 142
>ref|XP_006650303.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
6A-like [Oryza brachyantha]
Length = 143
Score = 224 bits (571), Expect = 3e-56
Identities = 114/143 (79%), Positives = 124/143 (86%), Gaps = 1/143 (0%)
Frame = +1
Query: 70 MADEDY-DMDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
MAD+DY D+D GY DEP +PE +EGAE E +N N ED PD +LG E EQ+ +RPRK
Sbjct: 1 MADDDYNDVDMGYEDEPPEPEIEEGAEEELENNN-EDAPDDVLGAEAEDKEQDKTQRPRK 59
Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPD
Sbjct: 60 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPD 119
Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
GSYEDWGV+ELIVEDSWKRQVGG
Sbjct: 120 GSYEDWGVNELIVEDSWKRQVGG 142
>gb|AFK33543.1| unknown [Lotus japonicus]
Length = 144
Score = 224 bits (571), Expect = 3e-56
Identities = 114/143 (79%), Positives = 124/143 (86%), Gaps = 1/143 (0%)
Frame = +1
Query: 70 MADEDYD-MDGGYVDEPIDPEPDEGAEIEEDNGNPEDIPDPLLGEAEEKTEQEPVERPRK 246
MADEDYD +D GY DEP++PE +EGAE + +N N E+ E EEK E +PV+RPRK
Sbjct: 1 MADEDYDDVDMGYEDEPVEPEIEEGAEEDLENKNEEEENGGEPLETEEKEEVQPVQRPRK 60
Query: 247 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 426
TSK+MTKYERARILGTRALQISMNAPVMVEL GETDPLEIAMKELRERKIPFTIRRYLPD
Sbjct: 61 TSKYMTKYERARILGTRALQISMNAPVMVELAGETDPLEIAMKELRERKIPFTIRRYLPD 120
Query: 427 GSYEDWGVDELIVEDSWKRQVGG 495
GSYEDWGVDELIVEDSWKRQVGG
Sbjct: 121 GSYEDWGVDELIVEDSWKRQVGG 143