BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00011755
         (562 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001274776.1| heterogeneous nuclear ribonucleoprotein A2 h...    81   4e-25
ref|XP_004228485.1| PREDICTED: uncharacterized protein LOC101255...    96   8e-18
ref|XP_006362738.1| PREDICTED: heterogeneous nuclear ribonucleop...    94   2e-17

>ref|NP_001274776.1| heterogeneous nuclear ribonucleoprotein A2 homolog 1-like [Solanum
           tuberosum] gi|82621124|gb|ABB86250.1| RNA-binding
           protein AKIP1-like [Solanum tuberosum]
          Length = 498

 Score = 81.3 bits (199), Expect(2) = 4e-25
 Identities = 46/93 (49%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = -3

Query: 560 EPHKSFEGHTLHCQKAVDGPKHNKN--XXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXX 387
           EPHK+FEGHTLHCQKA+DGPKH+KN                            P      
Sbjct: 317 EPHKTFEGHTLHCQKAIDGPKHSKNFHQQQQPQSQQHYPQHHHHNQQQHYYQHPAKKGKY 376

Query: 386 XXXXXXXXXXGHLMAPSGPAPVGYNPAVAAVTP 288
                     GHLMAPSGPAPVGYNPAVAAVTP
Sbjct: 377 SGSSAGAGSAGHLMAPSGPAPVGYNPAVAAVTP 409



 Score = 59.3 bits (142), Expect(2) = 4e-25
 Identities = 34/73 (46%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = -2

Query: 240 FGDWEFTW-SWWASESSGCDTGDEQCNRIWCTGCRWWLWSSARDAVPKLSDAGWCKTTRG 64
           FGDWEF W SWWASESSG        N     G +  +  S      K     WCKTTR 
Sbjct: 426 FGDWEFAWRSWWASESSGV---QPVVNNAAGYGAQVDMEFSL-ICNTKTLRCRWCKTTRW 481

Query: 63  WCTLLRIWRSLGE 25
           WC +L +WRSLG+
Sbjct: 482 WCPILWLWRSLGK 494


>ref|XP_004228485.1| PREDICTED: uncharacterized protein LOC101255522 isoform 1 [Solanum
           lycopersicum] gi|460365189|ref|XP_004228486.1|
           PREDICTED: uncharacterized protein LOC101255522 isoform
           2 [Solanum lycopersicum]
          Length = 488

 Score = 95.5 bits (236), Expect = 8e-18
 Identities = 65/166 (39%), Positives = 71/166 (42%), Gaps = 2/166 (1%)
 Frame = -3

Query: 560 EPHKSFEGHTLHCQKAVDGPKHNKN-XXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXX 384
           EPHK+FEGHTLHCQKA+DGPKH+KN                                   
Sbjct: 314 EPHKTFEGHTLHCQKAIDGPKHSKNFHQQQQPQSQQHYPQHHHHHNQQQHYYQHPAKKGK 373

Query: 383 XXXXXXXXXGHLMAPSGPAPVGYNPAVAAVTP-XXXXXXXXXXXXXXXXXXXXXXXXXXG 207
                    GHLMAPSGPAPVGYNPAVAAVTP                           G
Sbjct: 374 YSGSSAGSAGHLMAPSGPAPVGYNPAVAAVTPALGQALTALLATQGAGLGIGNLLGGLGG 433

Query: 206 PVNPQGVTPAMNNXXXXXXXXXXXXXXXXXGMQYQNSQMQGGVRPQ 69
           PV+ QGV P +N+                  M YQN QMQGG RPQ
Sbjct: 434 PVSHQGVQPVVNS---ATGYGAQGGYGAQPHMPYQNPQMQGGARPQ 476


>ref|XP_006362738.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
           1-like isoform X1 [Solanum tuberosum]
           gi|565394180|ref|XP_006362739.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein A2 homolog
           1-like isoform X2 [Solanum tuberosum]
           gi|565394183|ref|XP_006362740.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein A2 homolog
           1-like isoform X3 [Solanum tuberosum]
          Length = 490

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 68/167 (40%), Positives = 72/167 (43%), Gaps = 3/167 (1%)
 Frame = -3

Query: 560 EPHKSFEGHTLHCQKAVDGPKHNKN--XXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXX 387
           EPHK+FEGHTLHCQKA+DGPKH+KN                            P      
Sbjct: 317 EPHKTFEGHTLHCQKAIDGPKHSKNFHQQQQPQSQQHYPQHHHHNQQQHYYQHPAKKGKY 376

Query: 386 XXXXXXXXXXGHLMAPSGPAPVGYNPAVAAVTP-XXXXXXXXXXXXXXXXXXXXXXXXXX 210
                     GHLMAPSGPAPVGYNPAVAAVTP                           
Sbjct: 377 SGSSAGAGSAGHLMAPSGPAPVGYNPAVAAVTPALGQALTALLATQGAGLGIGNLLGGLG 436

Query: 209 GPVNPQGVTPAMNNXXXXXXXXXXXXXXXXXGMQYQNSQMQGGVRPQ 69
           GPVN QGV P +NN                  MQYQ  QMQGG RPQ
Sbjct: 437 GPVNHQGVQPVVNN---ATGYGAQGGYGAQPHMQYQ-PQMQGGARPQ 479