BLASTX nr result
ID: Atropa21_contig00011703
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00011703
(711 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353029.1| PREDICTED: protein LSD1-like isoform X1 [Sol... 137 4e-30
ref|XP_004233888.1| PREDICTED: uncharacterized protein LOC101265... 135 1e-29
gb|AEB22065.1| lesion stimulating disease 1 protein, partial [So... 128 2e-27
ref|XP_006363646.1| PREDICTED: protein LSD1-like isoform X2 [Sol... 114 2e-23
ref|XP_006363645.1| PREDICTED: protein LSD1-like isoform X1 [Sol... 114 2e-23
gb|ESW31607.1| hypothetical protein PHAVU_002G252000g [Phaseolus... 105 1e-20
gb|AFK48804.1| unknown [Lotus japonicus] 103 7e-20
gb|AFK33823.1| unknown [Lotus japonicus] 103 7e-20
ref|XP_006584536.1| PREDICTED: uncharacterized protein LOC100527... 102 1e-19
ref|NP_001241344.1| uncharacterized protein LOC100776394 [Glycin... 102 1e-19
gb|ESW31606.1| hypothetical protein PHAVU_002G252000g [Phaseolus... 100 4e-19
ref|XP_004504166.1| PREDICTED: protein LSD1-like isoform X2 [Cic... 100 5e-19
ref|XP_004504165.1| PREDICTED: protein LSD1-like isoform X1 [Cic... 100 5e-19
gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum] 100 5e-19
ref|XP_003630014.1| Lsd1-like protein [Medicago truncatula] gi|3... 100 8e-19
ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|3... 100 8e-19
ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|3... 100 8e-19
gb|AFK42285.1| unknown [Medicago truncatula] 99 1e-18
ref|XP_004158699.1| PREDICTED: protein LOL3-like [Cucumis sativus] 99 1e-18
ref|XP_004134888.1| PREDICTED: vacuolar protein sorting-associat... 99 1e-18
>ref|XP_006353029.1| PREDICTED: protein LSD1-like isoform X1 [Solanum tuberosum]
gi|565372914|ref|XP_006353030.1| PREDICTED: protein
LSD1-like isoform X2 [Solanum tuberosum]
Length = 174
Score = 137 bits (344), Expect = 4e-30
Identities = 64/82 (78%), Positives = 65/82 (79%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNGXXXXXXXXXXXXX 182
HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAH +N PNG
Sbjct: 81 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHASLNPPNGTATPASGSSSTAK 140
Query: 183 XRSQNQTVVVQNPMSVDESGKL 248
RSQNQTVVVQNPMSVDESGKL
Sbjct: 141 ARSQNQTVVVQNPMSVDESGKL 162
>ref|XP_004233888.1| PREDICTED: uncharacterized protein LOC101265799 [Solanum
lycopersicum]
Length = 534
Score = 135 bits (341), Expect = 1e-29
Identities = 65/82 (79%), Positives = 66/82 (80%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNGXXXXXXXXXXXXX 182
HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAH P+N PNG
Sbjct: 443 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHAPLNPPNG--TATTASGSSST 500
Query: 183 XRSQNQTVVVQNPMSVDESGKL 248
RSQNQTVVVQNPMSVDESGKL
Sbjct: 501 ARSQNQTVVVQNPMSVDESGKL 522
>gb|AEB22065.1| lesion stimulating disease 1 protein, partial [Solanum tuberosum]
Length = 113
Score = 128 bits (322), Expect = 2e-27
Identities = 59/76 (77%), Positives = 60/76 (78%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNGXXXXXXXXXXXXX 182
HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAH P+N PNG
Sbjct: 38 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHAPLNPPNGTATPASGSSSTAK 97
Query: 183 XRSQNQTVVVQNPMSV 230
RSQNQTVVVQNPMSV
Sbjct: 98 ARSQNQTVVVQNPMSV 113
>ref|XP_006363646.1| PREDICTED: protein LSD1-like isoform X2 [Solanum tuberosum]
Length = 137
Score = 114 bits (286), Expect = 2e-23
Identities = 57/83 (68%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPN-GXXXXXXXXXXXX 179
HV CGNCR MLMYPCGAPSVKCA+CHYIT+VNA DGR VPV+T N
Sbjct: 43 HVNCGNCRTMLMYPCGAPSVKCAICHYITHVNAVDGRIPVPVHTSNSSATSSAGPASSTA 102
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
RSQNQTVVVQNPMS+DESGKL
Sbjct: 103 TGRSQNQTVVVQNPMSLDESGKL 125
>ref|XP_006363645.1| PREDICTED: protein LSD1-like isoform X1 [Solanum tuberosum]
Length = 175
Score = 114 bits (286), Expect = 2e-23
Identities = 57/83 (68%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPN-GXXXXXXXXXXXX 179
HV CGNCR MLMYPCGAPSVKCA+CHYIT+VNA DGR VPV+T N
Sbjct: 81 HVNCGNCRTMLMYPCGAPSVKCAICHYITHVNAVDGRIPVPVHTSNSSATSSAGPASSTA 140
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
RSQNQTVVVQNPMS+DESGKL
Sbjct: 141 TGRSQNQTVVVQNPMSLDESGKL 163
>gb|ESW31607.1| hypothetical protein PHAVU_002G252000g [Phaseolus vulgaris]
Length = 176
Score = 105 bits (262), Expect = 1e-20
Identities = 50/83 (60%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNG-XXXXXXXXXXXX 179
HV+CGNCR LMYP GAPSVKCA+CHYITNV+ +GR +PVN PNG
Sbjct: 81 HVHCGNCRTALMYPYGAPSVKCAICHYITNVSTNNGRLPIPVNRPNGTTNAGTLPSTSTS 140
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
++Q+QTVVV+NPMSVD SGKL
Sbjct: 141 MPQTQSQTVVVENPMSVDSSGKL 163
>gb|AFK48804.1| unknown [Lotus japonicus]
Length = 175
Score = 103 bits (256), Expect = 7e-20
Identities = 51/83 (61%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNG-XXXXXXXXXXXX 179
HV CGNCR LMYP GAPSVKCA+CHYITNVN +GR VP++ PNG
Sbjct: 80 HVPCGNCRTTLMYPYGAPSVKCALCHYITNVNMSNGRLQVPMHRPNGTTNSGALPSTSTS 139
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
+SQ QTVVV+NPMSVD SGKL
Sbjct: 140 MPQSQTQTVVVENPMSVDSSGKL 162
>gb|AFK33823.1| unknown [Lotus japonicus]
Length = 175
Score = 103 bits (256), Expect = 7e-20
Identities = 51/83 (61%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNG-XXXXXXXXXXXX 179
HV CGNCR LMYP GAPSVKCA+CHYITNVN +GR VP++ PNG
Sbjct: 80 HVPCGNCRTTLMYPYGAPSVKCALCHYITNVNMSNGRLQVPMHRPNGTTNSGALPSTSTS 139
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
+SQ QTVVV+NPMSVD SGKL
Sbjct: 140 MPQSQTQTVVVENPMSVDSSGKL 162
>ref|XP_006584536.1| PREDICTED: uncharacterized protein LOC100527656 isoform X1 [Glycine
max]
Length = 177
Score = 102 bits (254), Expect = 1e-19
Identities = 49/83 (59%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNG-XXXXXXXXXXXX 179
HV+CGNCR LMYP GAPSVKCA+CH+ITNV+ +GR +PV+ PNG
Sbjct: 82 HVHCGNCRTTLMYPYGAPSVKCALCHFITNVSTNNGRLPIPVHRPNGTNNAGTLPSTSTS 141
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
+SQ+QTVVV+NPMSVD SGKL
Sbjct: 142 MPQSQSQTVVVENPMSVDSSGKL 164
>ref|NP_001241344.1| uncharacterized protein LOC100776394 [Glycine max]
gi|255641264|gb|ACU20909.1| unknown [Glycine max]
Length = 177
Score = 102 bits (254), Expect = 1e-19
Identities = 49/83 (59%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNG-XXXXXXXXXXXX 179
HV+CGNCR LMYP GAPSVKCA+CH+ITNV+ +GR +PV+ PNG
Sbjct: 82 HVHCGNCRTTLMYPYGAPSVKCALCHFITNVSTNNGRLPIPVHRPNGTTNAGTLPTTSTS 141
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
+SQ+QTVVV+NPMSVD SGKL
Sbjct: 142 MPQSQSQTVVVENPMSVDSSGKL 164
>gb|ESW31606.1| hypothetical protein PHAVU_002G252000g [Phaseolus vulgaris]
Length = 174
Score = 100 bits (250), Expect = 4e-19
Identities = 50/83 (60%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNG-XXXXXXXXXXXX 179
HV+CGNCR LMYP GAPSVKCA+CHYITN N +GR +PVN PNG
Sbjct: 81 HVHCGNCRTALMYPYGAPSVKCAICHYITNTN--NGRLPIPVNRPNGTTNAGTLPSTSTS 138
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
++Q+QTVVV+NPMSVD SGKL
Sbjct: 139 MPQTQSQTVVVENPMSVDSSGKL 161
>ref|XP_004504166.1| PREDICTED: protein LSD1-like isoform X2 [Cicer arietinum]
Length = 176
Score = 100 bits (249), Expect = 5e-19
Identities = 50/83 (60%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNG-XXXXXXXXXXXX 179
HV CGNCR LMYP GAPSVKCAVCHYITN+N +GR +PV P G
Sbjct: 81 HVPCGNCRTTLMYPSGAPSVKCAVCHYITNINMPNGRLPIPVRRPYGTTNSGTLPSTSTS 140
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
+SQ+QTVVV+NPMSVD SGKL
Sbjct: 141 MPQSQSQTVVVENPMSVDSSGKL 163
>ref|XP_004504165.1| PREDICTED: protein LSD1-like isoform X1 [Cicer arietinum]
Length = 171
Score = 100 bits (249), Expect = 5e-19
Identities = 50/83 (60%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNG-XXXXXXXXXXXX 179
HV CGNCR LMYP GAPSVKCAVCHYITN+N +GR +PV P G
Sbjct: 76 HVPCGNCRTTLMYPSGAPSVKCAVCHYITNINMPNGRLPIPVRRPYGTTNSGTLPSTSTS 135
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
+SQ+QTVVV+NPMSVD SGKL
Sbjct: 136 MPQSQSQTVVVENPMSVDSSGKL 158
>gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]
Length = 176
Score = 100 bits (249), Expect = 5e-19
Identities = 50/83 (60%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNG-XXXXXXXXXXXX 179
HV C NCR LMYP GAPSVKCAVCHYITN+N +GR VP N P G
Sbjct: 81 HVPCANCRTTLMYPYGAPSVKCAVCHYITNINMSNGRVPVPANRPQGTTNLGTLPSTSTS 140
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
+SQ QTVVV+NPMSVD SGKL
Sbjct: 141 MPQSQGQTVVVENPMSVDSSGKL 163
>ref|XP_003630014.1| Lsd1-like protein [Medicago truncatula] gi|355524036|gb|AET04490.1|
Lsd1-like protein [Medicago truncatula]
Length = 123
Score = 99.8 bits (247), Expect = 8e-19
Identities = 49/83 (59%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNG-XXXXXXXXXXXX 179
HV CGNCR LMYP GAPSVKCAVCHYITN+N +GR +P + P+G
Sbjct: 28 HVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRLPIPGHRPHGTTDSGMLPSTSTS 87
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
+SQ+QTVVV+NPMSVD SGKL
Sbjct: 88 MPQSQSQTVVVENPMSVDSSGKL 110
>ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|355524035|gb|AET04489.1|
Lsd1-like protein [Medicago truncatula]
Length = 223
Score = 99.8 bits (247), Expect = 8e-19
Identities = 49/83 (59%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNG-XXXXXXXXXXXX 179
HV CGNCR LMYP GAPSVKCAVCHYITN+N +GR +P + P+G
Sbjct: 128 HVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRLPIPGHRPHGTTDSGMLPSTSTS 187
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
+SQ+QTVVV+NPMSVD SGKL
Sbjct: 188 MPQSQSQTVVVENPMSVDSSGKL 210
>ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|355524034|gb|AET04488.1|
Lsd1-like protein [Medicago truncatula]
Length = 211
Score = 99.8 bits (247), Expect = 8e-19
Identities = 49/83 (59%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNG-XXXXXXXXXXXX 179
HV CGNCR LMYP GAPSVKCAVCHYITN+N +GR +P + P+G
Sbjct: 116 HVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRLPIPGHRPHGTTDSGMLPSTSTS 175
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
+SQ+QTVVV+NPMSVD SGKL
Sbjct: 176 MPQSQSQTVVVENPMSVDSSGKL 198
>gb|AFK42285.1| unknown [Medicago truncatula]
Length = 178
Score = 99.4 bits (246), Expect = 1e-18
Identities = 49/83 (59%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNG-XXXXXXXXXXXX 179
HV CGNCR LMYP GAPSVKCAVCHYITN+N +GR +P + P+G
Sbjct: 81 HVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRFPIPGHRPHGTTDSGMLPSTSTS 140
Query: 180 XXRSQNQTVVVQNPMSVDESGKL 248
+SQ+QTVVV+NPMSVD SGKL
Sbjct: 141 MPQSQSQTVVVENPMSVDSSGKL 163
>ref|XP_004158699.1| PREDICTED: protein LOL3-like [Cucumis sativus]
Length = 343
Score = 99.0 bits (245), Expect = 1e-18
Identities = 46/82 (56%), Positives = 56/82 (68%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNGXXXXXXXXXXXXX 182
HV CGNCR L++P GAPSVKCA+CHY+TNV + R +PV+ NG
Sbjct: 249 HVNCGNCRTTLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRRNGTISSGMPPSSSVR 308
Query: 183 XRSQNQTVVVQNPMSVDESGKL 248
+SQ+QTVVV+NPMSVDESGKL
Sbjct: 309 SQSQSQTVVVENPMSVDESGKL 330
>ref|XP_004134888.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
2-like [Cucumis sativus]
Length = 410
Score = 99.0 bits (245), Expect = 1e-18
Identities = 46/82 (56%), Positives = 56/82 (68%)
Frame = +3
Query: 3 HVYCGNCRMMLMYPCGAPSVKCAVCHYITNVNAGDGRAHVPVNTPNGXXXXXXXXXXXXX 182
HV CGNCR L++P GAPSVKCA+CHY+TNV + R +PV+ NG
Sbjct: 316 HVNCGNCRTTLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRRNGTISSGMPPSSSVR 375
Query: 183 XRSQNQTVVVQNPMSVDESGKL 248
+SQ+QTVVV+NPMSVDESGKL
Sbjct: 376 SQSQSQTVVVENPMSVDESGKL 397