BLASTX nr result

ID: Atropa21_contig00011687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00011687
         (481 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN74053.1| hypothetical protein [Plectrophora triquetra]          100   3e-19
ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) ...    99   6e-19
ref|YP_008993922.1| hypothetical chloroplast RF19 (chloroplast) ...    99   6e-19
ref|YP_008993836.1| hypothetical chloroplast RF19 (chloroplast) ...    99   6e-19
ref|YP_008993664.1| hypothetical chloroplast RF19 (chloroplast) ...    99   6e-19
ref|YP_008993578.1| hypothetical chloroplast RF19 (chloroplast) ...    99   6e-19
ref|YP_008993492.1| hypothetical chloroplast RF19 (chloroplast) ...    99   6e-19
ref|YP_008993406.1| hypothetical chloroplast RF19 (chloroplast) ...    99   6e-19
ref|YP_008993320.1| hypothetical chloroplast RF19 (chloroplast) ...    99   6e-19
ref|YP_008993234.1| hypothetical chloroplast RF19 (chloroplast) ...    99   6e-19
ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chlorop...    99   6e-19
gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein ...    99   6e-19
gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast)...    99   6e-19
ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chlorop...    99   6e-19
ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [...    99   6e-19
gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast)...    99   6e-19
ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|34...    99   6e-19
gb|AEX94024.1| hypothetical chloroplast RF19 (chloroplast) [Loma...    99   6e-19
ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwan...    99   6e-19
gb|ACN73640.1| hypothetical protein [Oncidium luteopurpureum] gi...    99   6e-19

>gb|ACN74053.1| hypothetical protein [Plectrophora triquetra]
          Length = 346

 Score =  100 bits (248), Expect = 3e-19
 Identities = 56/76 (73%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL TLSIG SYLFLL + VMEEGTEK+V A T FIMGQLM+FI IYYAP  LA
Sbjct: 6   VVGLYYGFLTTLSIGPSYLFLLRARVMEEGTEKEVSATTGFIMGQLMMFISIYYAPLHLA 65

Query: 240 LDKSHKITVLVLPYFL 193
           L + H ITVLVLPY L
Sbjct: 66  LGRPHTITVLVLPYLL 81


>ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia salicifolia]
          Length = 1858

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>ref|YP_008993922.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia sprengeri]
          Length = 1846

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>ref|YP_008993836.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia sinica]
          Length = 1841

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>ref|YP_008993664.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia odora]
          Length = 1852

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>ref|YP_008993578.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia liliifera]
          Length = 1852

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>ref|YP_008993492.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia kobus]
          Length = 1858

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>ref|YP_008993406.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia pyramidata]
          Length = 1858

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>ref|YP_008993320.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia dealbata]
          Length = 1846

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>ref|YP_008993234.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia cathcartii]
          Length = 1837

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
           grandiflora] gi|372862899|gb|AEX98975.1| photosystem I
           assembly protein Ycf1 (chloroplast) [Magnolia
           grandiflora]
          Length = 1843

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein (chloroplast)
           [Magnolia officinalis subsp. biloba]
          Length = 1863

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
           officinalis subsp. biloba]
          Length = 1863

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
           officinalis subsp. biloba] gi|372862561|gb|AEX98641.1|
           photosystem I assembly protein Ycf1 (chloroplast)
           [Magnolia officinalis subsp. biloba]
          Length = 1863

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia officinalis]
           gi|372862476|gb|AEX98557.1| hypothetical chloroplast RF1
           (chloroplast) [Magnolia officinalis]
          Length = 1863

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
           denudata]
          Length = 1863

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|343887596|gb|AEM65275.1|
           Ycf1 [Magnolia denudata]
          Length = 1863

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>gb|AEX94024.1| hypothetical chloroplast RF19 (chloroplast) [Lomandra longifolia]
          Length = 1763

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwangsiensis]
           gi|302424237|gb|ADL39113.1| hypothetical chloroplast
           RF19 [Magnolia kwangsiensis]
          Length = 1838

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 24  VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 83

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 84  LDRPHTITVLVLPYLL 99


>gb|ACN73640.1| hypothetical protein [Oncidium luteopurpureum]
           gi|224981969|gb|ACN73732.1| hypothetical protein
           [Oncidium alexandrae] gi|224982011|gb|ACN73753.1|
           hypothetical protein [Oncidium alexandrae]
          Length = 354

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 414 VVELYYEFLVTLSIGISYLFLL*SLVMEEGTEKKVLAITDFIMGQLMIFILIYYAP--LA 241
           VV LYY FL T SIG SYLFLL + VMEEGTEK+V A T FI GQLM+FI IYYAP  LA
Sbjct: 6   VVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLA 65

Query: 240 LDKSHKITVLVLPYFL 193
           LD+ H ITVLVLPY L
Sbjct: 66  LDRPHTITVLVLPYLL 81


Top