BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00011579
         (965 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360476.1| PREDICTED: flocculation protein FLO11-like i...   280   4e-73
ref|XP_004249997.1| PREDICTED: uncharacterized protein LOC101251...   258   2e-66
ref|XP_006345860.1| PREDICTED: micronuclear linker histone polyp...   115   3e-23
ref|XP_006345859.1| PREDICTED: micronuclear linker histone polyp...   115   3e-23
ref|XP_004239716.1| PREDICTED: uncharacterized protein LOC101267...   103   8e-20
gb|EOY19205.1| Uncharacterized protein isoform 4 [Theobroma cacao]     63   1e-07
gb|EOY19203.1| Uncharacterized protein isoform 2 [Theobroma caca...    63   1e-07
gb|EOY19202.1| Uncharacterized protein isoform 1 [Theobroma cacao]     63   1e-07
emb|CBI40233.3| unnamed protein product [Vitis vinifera]               60   1e-06
ref|XP_005889995.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    60   2e-06
dbj|BAG65619.1| unnamed protein product [Homo sapiens]                 59   2e-06
ref|XP_317690.3| AGAP007810-PA [Anopheles gambiae str. PEST] gi|...    58   5e-06
ref|XP_006627498.1| PREDICTED: DNA-directed RNA polymerase II su...    58   6e-06
ref|XP_005693564.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    57   8e-06

>ref|XP_006360476.1| PREDICTED: flocculation protein FLO11-like isoform X1 [Solanum
            tuberosum] gi|565389467|ref|XP_006360477.1| PREDICTED:
            flocculation protein FLO11-like isoform X2 [Solanum
            tuberosum] gi|565389469|ref|XP_006360478.1| PREDICTED:
            flocculation protein FLO11-like isoform X3 [Solanum
            tuberosum] gi|565389471|ref|XP_006360479.1| PREDICTED:
            flocculation protein FLO11-like isoform X4 [Solanum
            tuberosum] gi|565389473|ref|XP_006360480.1| PREDICTED:
            flocculation protein FLO11-like isoform X5 [Solanum
            tuberosum]
          Length = 678

 Score =  280 bits (717), Expect = 4e-73
 Identities = 157/267 (58%), Positives = 174/267 (65%), Gaps = 34/267 (12%)
 Frame = -1

Query: 965  LQSGQALQTGYELDLVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSIKAMEYP 786
            LQ+GQA QTGYEL LV HNTSN V SVLGELEQAKLSL KQINSSL            YP
Sbjct: 419  LQAGQAPQTGYELALVSHNTSNSVNSVLGELEQAKLSLTKQINSSL--------PTASYP 470

Query: 785  VLPLRFSSANYSPEPSTYEISASSYVDSRSNSITRSNRFTSPSPRPFPEVFSSTP-YRPI 609
             +P RFSS N S EPSTYE S S Y++SRS  +T+ NR T P  R FPEV SS P YRPI
Sbjct: 471  GMPSRFSSVNQSSEPSTYETSLSPYMESRSKYVTQGNRVTYPFQRAFPEVSSSAPSYRPI 530

Query: 608  SDTTLDAGLPSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPTNEAG 429
            S+T  DAG PSSMRFNPN SS LP SSKFTYP+YP+FPDMVPKL   EVFSRN+P NE  
Sbjct: 531  SETNFDAGQPSSMRFNPNSSSRLPLSSKFTYPSYPKFPDMVPKLPPNEVFSRNYPRNETD 590

Query: 428  LPPSFSFSTLCPKVVPKLPSGEVFSKNFPMND---------------------------- 333
            LPPSFSFST  P+VVP+LPS E  S+NFP N+                            
Sbjct: 591  LPPSFSFSTWSPEVVPRLPSTEKVSRNFPTNETDPPPSFSFSTLSPEVVPRLPSTGVFPR 650

Query: 332  -----QTGIPRSFSTSRYDAQLRPNMY 267
                 +TGIP SF+ SR D  +RPNMY
Sbjct: 651  NIPTNETGIPPSFA-SRNDPHIRPNMY 676


>ref|XP_004249997.1| PREDICTED: uncharacterized protein LOC101251943 [Solanum
            lycopersicum]
          Length = 729

 Score =  258 bits (660), Expect = 2e-66
 Identities = 154/286 (53%), Positives = 172/286 (60%), Gaps = 52/286 (18%)
 Frame = -1

Query: 965  LQSGQALQTGYELDLVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSIKAMEYP 786
            LQ+GQALQTGYEL LV HNTSNGV SVLG+LEQAKLSL KQINSSL            YP
Sbjct: 419  LQAGQALQTGYELALVSHNTSNGVDSVLGKLEQAKLSLTKQINSSL--------PTASYP 470

Query: 785  VLPLRFSSANYSPEPSTYEISAS-SYVDSRSNSITRSNRFTSPSPRPFPEVFSSTP---- 621
              P RFSS N+SPE STYEIS +  YV+SRS  +T+SNR T P  R FPEV SS P    
Sbjct: 471  GTPSRFSSLNHSPELSTYEISLTPPYVESRSKYVTQSNRVTYPFQRAFPEVSSSAPSYRP 530

Query: 620  -----------------------------------------------YRPISDTTLDAGL 582
                                                           YRPIS+T  DAG 
Sbjct: 531  ISETNFEAGQPSSTPYVESRSKYVTQSNRVTYPFQRAFTEVSSSAPSYRPISETNFDAGQ 590

Query: 581  PSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPTNEAGLPPSFSFST 402
            PSS+RFNPN SS LPFSSK TYP+YP+FPDMVPKL   EVFSRNFPTNE  LPPSFSFST
Sbjct: 591  PSSVRFNPNSSSRLPFSSKLTYPSYPKFPDMVPKLPPNEVFSRNFPTNETDLPPSFSFST 650

Query: 401  LCPKVVPKLPSGEVFSKNFPMNDQTGIPRSFSTSRYDAQLRPNMYS 264
            L  +VVP+LPS E  S+ FP N +T  P SFS S    ++ P + S
Sbjct: 651  LSQEVVPRLPSTEKVSRIFPTN-ETNPPPSFSFSTLSPEVVPRLPS 695


>ref|XP_006345860.1| PREDICTED: micronuclear linker histone polyprotein-like isoform X2
            [Solanum tuberosum]
          Length = 618

 Score =  115 bits (287), Expect = 3e-23
 Identities = 90/241 (37%), Positives = 126/241 (52%), Gaps = 11/241 (4%)
 Frame = -1

Query: 956  GQALQTGYELDLVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSIKAMEYPVLP 777
            G +LQ G  L  V  + S+ +GS+LG LEQAK S+++QIN S +   GSSI   E+ +  
Sbjct: 394  GSSLQAGQAL--VSRDASDNIGSILGALEQAKFSISQQINVSPIAEGGSSI---EHSIPT 448

Query: 776  LRFSSANYSPE-PSTYEISASSYVDSRSNSITRS--NRFTSPSP--RPFPEVFSSTPYRP 612
             R    +  P  P  + +     +++ + +  +   +RF+S +    P  + FS+TPY  
Sbjct: 449  ARIDRLDILPGFPGLFRLPTDFQLEATTTASYQGFPSRFSSANHFHEPGYDQFSTTPYME 508

Query: 611  ISDTTLDAGLPSSMRF---NPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPT 441
             S +    GLP +  F   NP      PFSSK TYPTYP  P+    +S           
Sbjct: 509  -SPSNAITGLPYTTGFDYLNPPSGFGHPFSSKSTYPTYPFRPNTTTTVSQ---------- 557

Query: 440  NEAGLPPSF--SFSTLCPKVVPKLPSGE-VFSKNFPMNDQTGIPRSFSTSRYDAQLRPNM 270
            ++A   P +  S +TL P VVP L SGE VF ++ P N+ TG P SF  S YDA LRPNM
Sbjct: 558  SQASWSPLYESSLTTLSPVVVPNLSSGEEVFLRSLPRNE-TGKPPSFPVSHYDAHLRPNM 616

Query: 269  Y 267
            Y
Sbjct: 617  Y 617


>ref|XP_006345859.1| PREDICTED: micronuclear linker histone polyprotein-like isoform X1
            [Solanum tuberosum]
          Length = 643

 Score =  115 bits (287), Expect = 3e-23
 Identities = 90/241 (37%), Positives = 126/241 (52%), Gaps = 11/241 (4%)
 Frame = -1

Query: 956  GQALQTGYELDLVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSIKAMEYPVLP 777
            G +LQ G  L  V  + S+ +GS+LG LEQAK S+++QIN S +   GSSI   E+ +  
Sbjct: 419  GSSLQAGQAL--VSRDASDNIGSILGALEQAKFSISQQINVSPIAEGGSSI---EHSIPT 473

Query: 776  LRFSSANYSPE-PSTYEISASSYVDSRSNSITRS--NRFTSPSP--RPFPEVFSSTPYRP 612
             R    +  P  P  + +     +++ + +  +   +RF+S +    P  + FS+TPY  
Sbjct: 474  ARIDRLDILPGFPGLFRLPTDFQLEATTTASYQGFPSRFSSANHFHEPGYDQFSTTPYME 533

Query: 611  ISDTTLDAGLPSSMRF---NPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPT 441
             S +    GLP +  F   NP      PFSSK TYPTYP  P+    +S           
Sbjct: 534  -SPSNAITGLPYTTGFDYLNPPSGFGHPFSSKSTYPTYPFRPNTTTTVSQ---------- 582

Query: 440  NEAGLPPSF--SFSTLCPKVVPKLPSGE-VFSKNFPMNDQTGIPRSFSTSRYDAQLRPNM 270
            ++A   P +  S +TL P VVP L SGE VF ++ P N+ TG P SF  S YDA LRPNM
Sbjct: 583  SQASWSPLYESSLTTLSPVVVPNLSSGEEVFLRSLPRNE-TGKPPSFPVSHYDAHLRPNM 641

Query: 269  Y 267
            Y
Sbjct: 642  Y 642


>ref|XP_004239716.1| PREDICTED: uncharacterized protein LOC101267607 [Solanum
            lycopersicum]
          Length = 617

 Score =  103 bits (258), Expect = 8e-20
 Identities = 88/245 (35%), Positives = 116/245 (47%), Gaps = 12/245 (4%)
 Frame = -1

Query: 965  LQSGQALQTGYELDLVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSIKAMEYP 786
            LQ+GQAL +G        + S+ +GS+LG LEQAK S+++QIN S   + G S      P
Sbjct: 396  LQAGQALVSG--------DASDNIGSILGALEQAKFSISQQINVSP--VEGRSSIEHSIP 445

Query: 785  V--------LPLRFSSANYSPEPSTYEISASSYVDSRSNSITRSNRFTSPSPRPFPEVFS 630
                     +P  F      P     E + ++      +  + +N F  P    F    S
Sbjct: 446  TAKIEDRLDIPPGFPGLFRLPTDFQLEATTTASYQGFPSRFSSANHFHEPGYNQF----S 501

Query: 629  STPYRPISDTTLDAGLPSSMRF---NPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVF 459
            +TPY   S +    GLP +  F   NP  S   PFSSK TYPTYP  P+    +S  +  
Sbjct: 502  ATPYME-SPSNAITGLPYTTGFDYLNPPSSFGHPFSSKSTYPTYPFRPNTTTTVSQSQAS 560

Query: 458  SRNFPTNEAGLPPSFSFSTLCPKVVPKLPSGE-VFSKNFPMNDQTGIPRSFSTSRYDAQL 282
                P  E+ L  S       P VVP L SGE VF ++ P N+ TG P SF  S YDA +
Sbjct: 561  WS--PLYESSLTKS------SPVVVPNLSSGEDVFLRSLPRNE-TGKPPSFPVSHYDAHM 611

Query: 281  RPNMY 267
            RPNMY
Sbjct: 612  RPNMY 616


>gb|EOY19205.1| Uncharacterized protein isoform 4 [Theobroma cacao]
          Length = 709

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 67/236 (28%), Positives = 101/236 (42%), Gaps = 64/236 (27%)
 Frame = -1

Query: 923  LVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSI-----------KAMEYPVLP 777
            LV H TS     VL  L+QA+LSL ++I S+L L+ G+S+           K  E   +P
Sbjct: 465  LVPHETSGRFTGVLDSLKQARLSLQQKI-STLSLVEGASVGKAIETSGSGRKVGERVEIP 523

Query: 776  L--------------------------RFSSANYSPE-----PSTYEISASSYVDSRSNS 690
            L                          + S AN+ P+      ++  +  +SY++++S+S
Sbjct: 524  LGCSGLFRVPTDISVEAPKANFLGSSSQLSLANHYPDRGVAPTASNHLLTTSYMNTQSSS 583

Query: 689  ITR-----SNRFTS-------PSPRPFPEVFSSTPYRPISDTTLDAGLPSSM-------- 570
             +      S+RF S        S  PFP  F+S+ Y  I D  +  G             
Sbjct: 584  SSNYQPVSSDRFFSGPYMYPRTSSSPFPTAFASSGY--IKDDQILTGQCEETGSRLSTPK 641

Query: 569  -RFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPTNEAGLPPS-FSF 408
              F+P+    LP SS   YPT+P +PD+VP++ + E F     T   G  P  FSF
Sbjct: 642  PSFDPSLEPVLPSSSLQNYPTFPSYPDLVPQIHAKEGFPAFHTTRSVGATPDWFSF 697


>gb|EOY19203.1| Uncharacterized protein isoform 2 [Theobroma cacao]
            gi|508727307|gb|EOY19204.1| Uncharacterized protein
            isoform 2 [Theobroma cacao]
          Length = 665

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 67/236 (28%), Positives = 101/236 (42%), Gaps = 64/236 (27%)
 Frame = -1

Query: 923  LVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSI-----------KAMEYPVLP 777
            LV H TS     VL  L+QA+LSL ++I S+L L+ G+S+           K  E   +P
Sbjct: 421  LVPHETSGRFTGVLDSLKQARLSLQQKI-STLSLVEGASVGKAIETSGSGRKVGERVEIP 479

Query: 776  L--------------------------RFSSANYSPE-----PSTYEISASSYVDSRSNS 690
            L                          + S AN+ P+      ++  +  +SY++++S+S
Sbjct: 480  LGCSGLFRVPTDISVEAPKANFLGSSSQLSLANHYPDRGVAPTASNHLLTTSYMNTQSSS 539

Query: 689  ITR-----SNRFTS-------PSPRPFPEVFSSTPYRPISDTTLDAGLPSSM-------- 570
             +      S+RF S        S  PFP  F+S+ Y  I D  +  G             
Sbjct: 540  SSNYQPVSSDRFFSGPYMYPRTSSSPFPTAFASSGY--IKDDQILTGQCEETGSRLSTPK 597

Query: 569  -RFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPTNEAGLPPS-FSF 408
              F+P+    LP SS   YPT+P +PD+VP++ + E F     T   G  P  FSF
Sbjct: 598  PSFDPSLEPVLPSSSLQNYPTFPSYPDLVPQIHAKEGFPAFHTTRSVGATPDWFSF 653


>gb|EOY19202.1| Uncharacterized protein isoform 1 [Theobroma cacao]
          Length = 749

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 67/236 (28%), Positives = 101/236 (42%), Gaps = 64/236 (27%)
 Frame = -1

Query: 923  LVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSI-----------KAMEYPVLP 777
            LV H TS     VL  L+QA+LSL ++I S+L L+ G+S+           K  E   +P
Sbjct: 505  LVPHETSGRFTGVLDSLKQARLSLQQKI-STLSLVEGASVGKAIETSGSGRKVGERVEIP 563

Query: 776  L--------------------------RFSSANYSPE-----PSTYEISASSYVDSRSNS 690
            L                          + S AN+ P+      ++  +  +SY++++S+S
Sbjct: 564  LGCSGLFRVPTDISVEAPKANFLGSSSQLSLANHYPDRGVAPTASNHLLTTSYMNTQSSS 623

Query: 689  ITR-----SNRFTS-------PSPRPFPEVFSSTPYRPISDTTLDAGLPSSM-------- 570
             +      S+RF S        S  PFP  F+S+ Y  I D  +  G             
Sbjct: 624  SSNYQPVSSDRFFSGPYMYPRTSSSPFPTAFASSGY--IKDDQILTGQCEETGSRLSTPK 681

Query: 569  -RFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPTNEAGLPPS-FSF 408
              F+P+    LP SS   YPT+P +PD+VP++ + E F     T   G  P  FSF
Sbjct: 682  PSFDPSLEPVLPSSSLQNYPTFPSYPDLVPQIHAKEGFPAFHTTRSVGATPDWFSF 737


>emb|CBI40233.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
 Frame = -1

Query: 923  LVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSIKAMEYPVLP---------LR 771
            LV   TSN +G VL  L+QA+LSL  ++N   L+  GS  +A+E P  P         + 
Sbjct: 473  LVPRETSNELGGVLEALQQARLSLQHKLNRLPLIEGGSIGRAIE-PSFPSTRAWERVEIP 531

Query: 770  FSSANYSPEPSTYEISASS---YVDSRSNSITRS------------NRF-TSP-----SP 654
               A     P+ Y++  ++   ++ S S S  ++            +RF TSP     S 
Sbjct: 532  VGCAGLFRVPADYQLGTATEANFLGSDSQSSLKNYYPDTGFVANPGDRFLTSPYLKTGSS 591

Query: 653  RPFPEVFSSTPYRPISDTTLDAGLPSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLS 474
             P  + F ++PYR           P    F+    + L  S+++T+PTY   PD++ ++ 
Sbjct: 592  VPTDDSFLTSPYRETGSRIP----PLRPSFDYYSDAGLSASTRYTHPTYSSHPDLLYRMP 647

Query: 473  SGEVFSRNFPTNEAGLPPSFSFSTLCPKVVPKL 375
              E F+R    +E G+P +  FS     + P +
Sbjct: 648  FNEGFARPPRNSEVGIPSTDHFSFYDDHIRPNM 680


>ref|XP_005889995.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB1 [Bos mutus]
          Length = 1942

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 46/156 (29%), Positives = 65/156 (41%), Gaps = 14/156 (8%)
 Frame = -1

Query: 767  SSANYSPEPSTYEISASSYV-------DSRSNSITRSNRFTSPSPRPFPEVFSSTPYRPI 609
            +S NYSP   +Y +++ SY         SR N+  +  R+T  SP   P   S +P  P 
Sbjct: 1765 TSPNYSPTSPSYSLTSPSYSPTSPSYSPSRKNNSXKIPRYTPQSPTYTPSSPSYSPTSPK 1824

Query: 608  SDTTLDAGLPSSMRFNPNPSSHLPFSSKFT------YPTYPEFPDMVPKLSS-GEVFSRN 450
               T  +  PSS  + P    + P S K++       PT P +    PK SS    +S  
Sbjct: 1825 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSLKYXPTSPTYSPTTPKYSSTSPTYS-- 1882

Query: 449  FPTNEAGLPPSFSFSTLCPKVVPKLPSGEVFSKNFP 342
             PT+    P S  +S   P   P  P G  +S   P
Sbjct: 1883 -PTSPVYTPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1917


>dbj|BAG65619.1| unnamed protein product [Homo sapiens]
          Length = 1935

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
 Frame = -1

Query: 767  SSANYSPEPSTYEISASSYVDSRSNSITRSNRFTSPSPRPFPEVFSSTPYRPISDTTLDA 588
            +S NYSP   +Y  ++ SY  +  +    S R+T  SP   P   S +P  P    T   
Sbjct: 1744 TSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPK 1803

Query: 587  GLPSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLS-SGEVFS----RNFPTNEAGLP 423
              P+S  ++P+   + P S KF+ PT P++    PK S +G  +S    +  PT+    P
Sbjct: 1804 YTPTSPPYSPSSPEYTPTSPKFS-PTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSP 1862

Query: 422  PSFSFSTLCPKVVPKLPSGEVFSKNFPMNDQTGIPRSFSTSRY 294
             S  ++   PK  P  P+    S  +     T  P S   S Y
Sbjct: 1863 TSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTY 1905


>ref|XP_317690.3| AGAP007810-PA [Anopheles gambiae str. PEST]
            gi|116123421|gb|EAA12308.3| AGAP007810-PA [Anopheles
            gambiae str. PEST]
          Length = 1878

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 58/192 (30%), Positives = 81/192 (42%), Gaps = 14/192 (7%)
 Frame = -1

Query: 767  SSANYSPEPSTYEISASSYVDSRSNSITRSNRFTSPSPRPFPEVFSSTPYRPISDTTLDA 588
            ++ NYSP   +Y   +  +  S SN  +     TSPS  P    +S  P  P+   T  +
Sbjct: 1621 ATQNYSPTSPSYSPMSPMHPTSASNFASPGYSPTSPSYSPTSPSYS--PSSPVFSPTSPS 1678

Query: 587  GLPSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNF-PTNEAGLPPSFS 411
              PSS  ++P   S+ P S  ++ PT P F  + P  S     S N+ PT+    P S S
Sbjct: 1679 YSPSSPSYSPTSPSYSPTSPSYS-PTSPNFTPVTPSYSPS---SPNYSPTSPHYSPASPS 1734

Query: 410  FSTLCPKVVPKLPSGEVFSKNF-------PMNDQTG------IPRSFSTSRYDAQLRPNM 270
            +S   PK  P  PS    S ++       P + Q G       P S S S    Q  P  
Sbjct: 1735 YSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSSPQHSPGS 1794

Query: 269  YSN*YCLQYSSW 234
             SN Y +  SS+
Sbjct: 1795 SSNHYSIGSSSY 1806


>ref|XP_006627498.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like
            [Lepisosteus oculatus]
          Length = 1905

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
 Frame = -1

Query: 767  SSANYSPEPSTYEISASSYVDSRSNSITRSNRFTSPSPRPFPEVFSSTPYRPISDTTLDA 588
            +S NYSP   +Y  ++ SY  +  +  + S R+T  SP   P   S +P  P    T   
Sbjct: 1714 TSPNYSPTSPSYSPTSPSYSPTSPSYSSTSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPK 1773

Query: 587  GLPSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLS-SGEVFS----RNFPTNEAGLP 423
              P+S  ++P+   + P S K++ PT P++    PK S +   +S    +  PT+    P
Sbjct: 1774 YTPTSPSYSPSSPEYTPTSPKYS-PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1832

Query: 422  PSFSFSTLCPKVVPKLPSGEVFSKNFPMNDQTGIPRSFSTSRY 294
             S  ++   PK  P  P+    S  +     T  P S   S Y
Sbjct: 1833 TSPGYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTY 1875


>ref|XP_005693564.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB1 [Capra hircus]
          Length = 1953

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 44/166 (26%), Positives = 73/166 (43%)
 Frame = -1

Query: 767  SSANYSPEPSTYEISASSYVDSRSNSITRSNRFTSPSPRPFPEVFSSTPYRPISDTTLDA 588
            +S NY+P    Y  ++ SY  +  +    S  ++  SPR  P+  + TP  P    +  +
Sbjct: 1775 TSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPS 1834

Query: 587  GLPSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPTNEAGLPPSFSF 408
              P+S ++ P   S+ P S ++T PT P++    PK S         PT+    P S ++
Sbjct: 1835 YSPTSPKYTPTSPSYSPSSPEYT-PTSPKYSPTSPKYS---------PTSPKYSPTSPTY 1884

Query: 407  STLCPKVVPKLPSGEVFSKNFPMNDQTGIPRSFSTSRYDAQLRPNM 270
            S   PK  P  P+   +S   P+   T    S ++  Y     PN+
Sbjct: 1885 SPTTPKYSPTSPT---YSPTSPVYTPTSPKYSPTSPTYSPTSPPNL 1927