BLASTX nr result
ID: Atropa21_contig00011579
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00011579 (965 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006360476.1| PREDICTED: flocculation protein FLO11-like i... 280 4e-73 ref|XP_004249997.1| PREDICTED: uncharacterized protein LOC101251... 258 2e-66 ref|XP_006345860.1| PREDICTED: micronuclear linker histone polyp... 115 3e-23 ref|XP_006345859.1| PREDICTED: micronuclear linker histone polyp... 115 3e-23 ref|XP_004239716.1| PREDICTED: uncharacterized protein LOC101267... 103 8e-20 gb|EOY19205.1| Uncharacterized protein isoform 4 [Theobroma cacao] 63 1e-07 gb|EOY19203.1| Uncharacterized protein isoform 2 [Theobroma caca... 63 1e-07 gb|EOY19202.1| Uncharacterized protein isoform 1 [Theobroma cacao] 63 1e-07 emb|CBI40233.3| unnamed protein product [Vitis vinifera] 60 1e-06 ref|XP_005889995.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 60 2e-06 dbj|BAG65619.1| unnamed protein product [Homo sapiens] 59 2e-06 ref|XP_317690.3| AGAP007810-PA [Anopheles gambiae str. PEST] gi|... 58 5e-06 ref|XP_006627498.1| PREDICTED: DNA-directed RNA polymerase II su... 58 6e-06 ref|XP_005693564.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 57 8e-06 >ref|XP_006360476.1| PREDICTED: flocculation protein FLO11-like isoform X1 [Solanum tuberosum] gi|565389467|ref|XP_006360477.1| PREDICTED: flocculation protein FLO11-like isoform X2 [Solanum tuberosum] gi|565389469|ref|XP_006360478.1| PREDICTED: flocculation protein FLO11-like isoform X3 [Solanum tuberosum] gi|565389471|ref|XP_006360479.1| PREDICTED: flocculation protein FLO11-like isoform X4 [Solanum tuberosum] gi|565389473|ref|XP_006360480.1| PREDICTED: flocculation protein FLO11-like isoform X5 [Solanum tuberosum] Length = 678 Score = 280 bits (717), Expect = 4e-73 Identities = 157/267 (58%), Positives = 174/267 (65%), Gaps = 34/267 (12%) Frame = -1 Query: 965 LQSGQALQTGYELDLVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSIKAMEYP 786 LQ+GQA QTGYEL LV HNTSN V SVLGELEQAKLSL KQINSSL YP Sbjct: 419 LQAGQAPQTGYELALVSHNTSNSVNSVLGELEQAKLSLTKQINSSL--------PTASYP 470 Query: 785 VLPLRFSSANYSPEPSTYEISASSYVDSRSNSITRSNRFTSPSPRPFPEVFSSTP-YRPI 609 +P RFSS N S EPSTYE S S Y++SRS +T+ NR T P R FPEV SS P YRPI Sbjct: 471 GMPSRFSSVNQSSEPSTYETSLSPYMESRSKYVTQGNRVTYPFQRAFPEVSSSAPSYRPI 530 Query: 608 SDTTLDAGLPSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPTNEAG 429 S+T DAG PSSMRFNPN SS LP SSKFTYP+YP+FPDMVPKL EVFSRN+P NE Sbjct: 531 SETNFDAGQPSSMRFNPNSSSRLPLSSKFTYPSYPKFPDMVPKLPPNEVFSRNYPRNETD 590 Query: 428 LPPSFSFSTLCPKVVPKLPSGEVFSKNFPMND---------------------------- 333 LPPSFSFST P+VVP+LPS E S+NFP N+ Sbjct: 591 LPPSFSFSTWSPEVVPRLPSTEKVSRNFPTNETDPPPSFSFSTLSPEVVPRLPSTGVFPR 650 Query: 332 -----QTGIPRSFSTSRYDAQLRPNMY 267 +TGIP SF+ SR D +RPNMY Sbjct: 651 NIPTNETGIPPSFA-SRNDPHIRPNMY 676 >ref|XP_004249997.1| PREDICTED: uncharacterized protein LOC101251943 [Solanum lycopersicum] Length = 729 Score = 258 bits (660), Expect = 2e-66 Identities = 154/286 (53%), Positives = 172/286 (60%), Gaps = 52/286 (18%) Frame = -1 Query: 965 LQSGQALQTGYELDLVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSIKAMEYP 786 LQ+GQALQTGYEL LV HNTSNGV SVLG+LEQAKLSL KQINSSL YP Sbjct: 419 LQAGQALQTGYELALVSHNTSNGVDSVLGKLEQAKLSLTKQINSSL--------PTASYP 470 Query: 785 VLPLRFSSANYSPEPSTYEISAS-SYVDSRSNSITRSNRFTSPSPRPFPEVFSSTP---- 621 P RFSS N+SPE STYEIS + YV+SRS +T+SNR T P R FPEV SS P Sbjct: 471 GTPSRFSSLNHSPELSTYEISLTPPYVESRSKYVTQSNRVTYPFQRAFPEVSSSAPSYRP 530 Query: 620 -----------------------------------------------YRPISDTTLDAGL 582 YRPIS+T DAG Sbjct: 531 ISETNFEAGQPSSTPYVESRSKYVTQSNRVTYPFQRAFTEVSSSAPSYRPISETNFDAGQ 590 Query: 581 PSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPTNEAGLPPSFSFST 402 PSS+RFNPN SS LPFSSK TYP+YP+FPDMVPKL EVFSRNFPTNE LPPSFSFST Sbjct: 591 PSSVRFNPNSSSRLPFSSKLTYPSYPKFPDMVPKLPPNEVFSRNFPTNETDLPPSFSFST 650 Query: 401 LCPKVVPKLPSGEVFSKNFPMNDQTGIPRSFSTSRYDAQLRPNMYS 264 L +VVP+LPS E S+ FP N +T P SFS S ++ P + S Sbjct: 651 LSQEVVPRLPSTEKVSRIFPTN-ETNPPPSFSFSTLSPEVVPRLPS 695 >ref|XP_006345860.1| PREDICTED: micronuclear linker histone polyprotein-like isoform X2 [Solanum tuberosum] Length = 618 Score = 115 bits (287), Expect = 3e-23 Identities = 90/241 (37%), Positives = 126/241 (52%), Gaps = 11/241 (4%) Frame = -1 Query: 956 GQALQTGYELDLVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSIKAMEYPVLP 777 G +LQ G L V + S+ +GS+LG LEQAK S+++QIN S + GSSI E+ + Sbjct: 394 GSSLQAGQAL--VSRDASDNIGSILGALEQAKFSISQQINVSPIAEGGSSI---EHSIPT 448 Query: 776 LRFSSANYSPE-PSTYEISASSYVDSRSNSITRS--NRFTSPSP--RPFPEVFSSTPYRP 612 R + P P + + +++ + + + +RF+S + P + FS+TPY Sbjct: 449 ARIDRLDILPGFPGLFRLPTDFQLEATTTASYQGFPSRFSSANHFHEPGYDQFSTTPYME 508 Query: 611 ISDTTLDAGLPSSMRF---NPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPT 441 S + GLP + F NP PFSSK TYPTYP P+ +S Sbjct: 509 -SPSNAITGLPYTTGFDYLNPPSGFGHPFSSKSTYPTYPFRPNTTTTVSQ---------- 557 Query: 440 NEAGLPPSF--SFSTLCPKVVPKLPSGE-VFSKNFPMNDQTGIPRSFSTSRYDAQLRPNM 270 ++A P + S +TL P VVP L SGE VF ++ P N+ TG P SF S YDA LRPNM Sbjct: 558 SQASWSPLYESSLTTLSPVVVPNLSSGEEVFLRSLPRNE-TGKPPSFPVSHYDAHLRPNM 616 Query: 269 Y 267 Y Sbjct: 617 Y 617 >ref|XP_006345859.1| PREDICTED: micronuclear linker histone polyprotein-like isoform X1 [Solanum tuberosum] Length = 643 Score = 115 bits (287), Expect = 3e-23 Identities = 90/241 (37%), Positives = 126/241 (52%), Gaps = 11/241 (4%) Frame = -1 Query: 956 GQALQTGYELDLVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSIKAMEYPVLP 777 G +LQ G L V + S+ +GS+LG LEQAK S+++QIN S + GSSI E+ + Sbjct: 419 GSSLQAGQAL--VSRDASDNIGSILGALEQAKFSISQQINVSPIAEGGSSI---EHSIPT 473 Query: 776 LRFSSANYSPE-PSTYEISASSYVDSRSNSITRS--NRFTSPSP--RPFPEVFSSTPYRP 612 R + P P + + +++ + + + +RF+S + P + FS+TPY Sbjct: 474 ARIDRLDILPGFPGLFRLPTDFQLEATTTASYQGFPSRFSSANHFHEPGYDQFSTTPYME 533 Query: 611 ISDTTLDAGLPSSMRF---NPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPT 441 S + GLP + F NP PFSSK TYPTYP P+ +S Sbjct: 534 -SPSNAITGLPYTTGFDYLNPPSGFGHPFSSKSTYPTYPFRPNTTTTVSQ---------- 582 Query: 440 NEAGLPPSF--SFSTLCPKVVPKLPSGE-VFSKNFPMNDQTGIPRSFSTSRYDAQLRPNM 270 ++A P + S +TL P VVP L SGE VF ++ P N+ TG P SF S YDA LRPNM Sbjct: 583 SQASWSPLYESSLTTLSPVVVPNLSSGEEVFLRSLPRNE-TGKPPSFPVSHYDAHLRPNM 641 Query: 269 Y 267 Y Sbjct: 642 Y 642 >ref|XP_004239716.1| PREDICTED: uncharacterized protein LOC101267607 [Solanum lycopersicum] Length = 617 Score = 103 bits (258), Expect = 8e-20 Identities = 88/245 (35%), Positives = 116/245 (47%), Gaps = 12/245 (4%) Frame = -1 Query: 965 LQSGQALQTGYELDLVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSIKAMEYP 786 LQ+GQAL +G + S+ +GS+LG LEQAK S+++QIN S + G S P Sbjct: 396 LQAGQALVSG--------DASDNIGSILGALEQAKFSISQQINVSP--VEGRSSIEHSIP 445 Query: 785 V--------LPLRFSSANYSPEPSTYEISASSYVDSRSNSITRSNRFTSPSPRPFPEVFS 630 +P F P E + ++ + + +N F P F S Sbjct: 446 TAKIEDRLDIPPGFPGLFRLPTDFQLEATTTASYQGFPSRFSSANHFHEPGYNQF----S 501 Query: 629 STPYRPISDTTLDAGLPSSMRF---NPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVF 459 +TPY S + GLP + F NP S PFSSK TYPTYP P+ +S + Sbjct: 502 ATPYME-SPSNAITGLPYTTGFDYLNPPSSFGHPFSSKSTYPTYPFRPNTTTTVSQSQAS 560 Query: 458 SRNFPTNEAGLPPSFSFSTLCPKVVPKLPSGE-VFSKNFPMNDQTGIPRSFSTSRYDAQL 282 P E+ L S P VVP L SGE VF ++ P N+ TG P SF S YDA + Sbjct: 561 WS--PLYESSLTKS------SPVVVPNLSSGEDVFLRSLPRNE-TGKPPSFPVSHYDAHM 611 Query: 281 RPNMY 267 RPNMY Sbjct: 612 RPNMY 616 >gb|EOY19205.1| Uncharacterized protein isoform 4 [Theobroma cacao] Length = 709 Score = 63.2 bits (152), Expect = 1e-07 Identities = 67/236 (28%), Positives = 101/236 (42%), Gaps = 64/236 (27%) Frame = -1 Query: 923 LVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSI-----------KAMEYPVLP 777 LV H TS VL L+QA+LSL ++I S+L L+ G+S+ K E +P Sbjct: 465 LVPHETSGRFTGVLDSLKQARLSLQQKI-STLSLVEGASVGKAIETSGSGRKVGERVEIP 523 Query: 776 L--------------------------RFSSANYSPE-----PSTYEISASSYVDSRSNS 690 L + S AN+ P+ ++ + +SY++++S+S Sbjct: 524 LGCSGLFRVPTDISVEAPKANFLGSSSQLSLANHYPDRGVAPTASNHLLTTSYMNTQSSS 583 Query: 689 ITR-----SNRFTS-------PSPRPFPEVFSSTPYRPISDTTLDAGLPSSM-------- 570 + S+RF S S PFP F+S+ Y I D + G Sbjct: 584 SSNYQPVSSDRFFSGPYMYPRTSSSPFPTAFASSGY--IKDDQILTGQCEETGSRLSTPK 641 Query: 569 -RFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPTNEAGLPPS-FSF 408 F+P+ LP SS YPT+P +PD+VP++ + E F T G P FSF Sbjct: 642 PSFDPSLEPVLPSSSLQNYPTFPSYPDLVPQIHAKEGFPAFHTTRSVGATPDWFSF 697 >gb|EOY19203.1| Uncharacterized protein isoform 2 [Theobroma cacao] gi|508727307|gb|EOY19204.1| Uncharacterized protein isoform 2 [Theobroma cacao] Length = 665 Score = 63.2 bits (152), Expect = 1e-07 Identities = 67/236 (28%), Positives = 101/236 (42%), Gaps = 64/236 (27%) Frame = -1 Query: 923 LVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSI-----------KAMEYPVLP 777 LV H TS VL L+QA+LSL ++I S+L L+ G+S+ K E +P Sbjct: 421 LVPHETSGRFTGVLDSLKQARLSLQQKI-STLSLVEGASVGKAIETSGSGRKVGERVEIP 479 Query: 776 L--------------------------RFSSANYSPE-----PSTYEISASSYVDSRSNS 690 L + S AN+ P+ ++ + +SY++++S+S Sbjct: 480 LGCSGLFRVPTDISVEAPKANFLGSSSQLSLANHYPDRGVAPTASNHLLTTSYMNTQSSS 539 Query: 689 ITR-----SNRFTS-------PSPRPFPEVFSSTPYRPISDTTLDAGLPSSM-------- 570 + S+RF S S PFP F+S+ Y I D + G Sbjct: 540 SSNYQPVSSDRFFSGPYMYPRTSSSPFPTAFASSGY--IKDDQILTGQCEETGSRLSTPK 597 Query: 569 -RFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPTNEAGLPPS-FSF 408 F+P+ LP SS YPT+P +PD+VP++ + E F T G P FSF Sbjct: 598 PSFDPSLEPVLPSSSLQNYPTFPSYPDLVPQIHAKEGFPAFHTTRSVGATPDWFSF 653 >gb|EOY19202.1| Uncharacterized protein isoform 1 [Theobroma cacao] Length = 749 Score = 63.2 bits (152), Expect = 1e-07 Identities = 67/236 (28%), Positives = 101/236 (42%), Gaps = 64/236 (27%) Frame = -1 Query: 923 LVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSI-----------KAMEYPVLP 777 LV H TS VL L+QA+LSL ++I S+L L+ G+S+ K E +P Sbjct: 505 LVPHETSGRFTGVLDSLKQARLSLQQKI-STLSLVEGASVGKAIETSGSGRKVGERVEIP 563 Query: 776 L--------------------------RFSSANYSPE-----PSTYEISASSYVDSRSNS 690 L + S AN+ P+ ++ + +SY++++S+S Sbjct: 564 LGCSGLFRVPTDISVEAPKANFLGSSSQLSLANHYPDRGVAPTASNHLLTTSYMNTQSSS 623 Query: 689 ITR-----SNRFTS-------PSPRPFPEVFSSTPYRPISDTTLDAGLPSSM-------- 570 + S+RF S S PFP F+S+ Y I D + G Sbjct: 624 SSNYQPVSSDRFFSGPYMYPRTSSSPFPTAFASSGY--IKDDQILTGQCEETGSRLSTPK 681 Query: 569 -RFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPTNEAGLPPS-FSF 408 F+P+ LP SS YPT+P +PD+VP++ + E F T G P FSF Sbjct: 682 PSFDPSLEPVLPSSSLQNYPTFPSYPDLVPQIHAKEGFPAFHTTRSVGATPDWFSF 737 >emb|CBI40233.3| unnamed protein product [Vitis vinifera] Length = 682 Score = 60.1 bits (144), Expect = 1e-06 Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 30/213 (14%) Frame = -1 Query: 923 LVDHNTSNGVGSVLGELEQAKLSLNKQINSSLLLIAGSSIKAMEYPVLP---------LR 771 LV TSN +G VL L+QA+LSL ++N L+ GS +A+E P P + Sbjct: 473 LVPRETSNELGGVLEALQQARLSLQHKLNRLPLIEGGSIGRAIE-PSFPSTRAWERVEIP 531 Query: 770 FSSANYSPEPSTYEISASS---YVDSRSNSITRS------------NRF-TSP-----SP 654 A P+ Y++ ++ ++ S S S ++ +RF TSP S Sbjct: 532 VGCAGLFRVPADYQLGTATEANFLGSDSQSSLKNYYPDTGFVANPGDRFLTSPYLKTGSS 591 Query: 653 RPFPEVFSSTPYRPISDTTLDAGLPSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLS 474 P + F ++PYR P F+ + L S+++T+PTY PD++ ++ Sbjct: 592 VPTDDSFLTSPYRETGSRIP----PLRPSFDYYSDAGLSASTRYTHPTYSSHPDLLYRMP 647 Query: 473 SGEVFSRNFPTNEAGLPPSFSFSTLCPKVVPKL 375 E F+R +E G+P + FS + P + Sbjct: 648 FNEGFARPPRNSEVGIPSTDHFSFYDDHIRPNM 680 >ref|XP_005889995.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1 [Bos mutus] Length = 1942 Score = 59.7 bits (143), Expect = 2e-06 Identities = 46/156 (29%), Positives = 65/156 (41%), Gaps = 14/156 (8%) Frame = -1 Query: 767 SSANYSPEPSTYEISASSYV-------DSRSNSITRSNRFTSPSPRPFPEVFSSTPYRPI 609 +S NYSP +Y +++ SY SR N+ + R+T SP P S +P P Sbjct: 1765 TSPNYSPTSPSYSLTSPSYSPTSPSYSPSRKNNSXKIPRYTPQSPTYTPSSPSYSPTSPK 1824 Query: 608 SDTTLDAGLPSSMRFNPNPSSHLPFSSKFT------YPTYPEFPDMVPKLSS-GEVFSRN 450 T + PSS + P + P S K++ PT P + PK SS +S Sbjct: 1825 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSLKYXPTSPTYSPTTPKYSSTSPTYS-- 1882 Query: 449 FPTNEAGLPPSFSFSTLCPKVVPKLPSGEVFSKNFP 342 PT+ P S +S P P P G +S P Sbjct: 1883 -PTSPVYTPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1917 >dbj|BAG65619.1| unnamed protein product [Homo sapiens] Length = 1935 Score = 59.3 bits (142), Expect = 2e-06 Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 5/163 (3%) Frame = -1 Query: 767 SSANYSPEPSTYEISASSYVDSRSNSITRSNRFTSPSPRPFPEVFSSTPYRPISDTTLDA 588 +S NYSP +Y ++ SY + + S R+T SP P S +P P T Sbjct: 1744 TSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPK 1803 Query: 587 GLPSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLS-SGEVFS----RNFPTNEAGLP 423 P+S ++P+ + P S KF+ PT P++ PK S +G +S + PT+ P Sbjct: 1804 YTPTSPPYSPSSPEYTPTSPKFS-PTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSP 1862 Query: 422 PSFSFSTLCPKVVPKLPSGEVFSKNFPMNDQTGIPRSFSTSRY 294 S ++ PK P P+ S + T P S S Y Sbjct: 1863 TSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTY 1905 >ref|XP_317690.3| AGAP007810-PA [Anopheles gambiae str. PEST] gi|116123421|gb|EAA12308.3| AGAP007810-PA [Anopheles gambiae str. PEST] Length = 1878 Score = 58.2 bits (139), Expect = 5e-06 Identities = 58/192 (30%), Positives = 81/192 (42%), Gaps = 14/192 (7%) Frame = -1 Query: 767 SSANYSPEPSTYEISASSYVDSRSNSITRSNRFTSPSPRPFPEVFSSTPYRPISDTTLDA 588 ++ NYSP +Y + + S SN + TSPS P +S P P+ T + Sbjct: 1621 ATQNYSPTSPSYSPMSPMHPTSASNFASPGYSPTSPSYSPTSPSYS--PSSPVFSPTSPS 1678 Query: 587 GLPSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNF-PTNEAGLPPSFS 411 PSS ++P S+ P S ++ PT P F + P S S N+ PT+ P S S Sbjct: 1679 YSPSSPSYSPTSPSYSPTSPSYS-PTSPNFTPVTPSYSPS---SPNYSPTSPHYSPASPS 1734 Query: 410 FSTLCPKVVPKLPSGEVFSKNF-------PMNDQTG------IPRSFSTSRYDAQLRPNM 270 +S PK P PS S ++ P + Q G P S S S Q P Sbjct: 1735 YSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSSPQHSPGS 1794 Query: 269 YSN*YCLQYSSW 234 SN Y + SS+ Sbjct: 1795 SSNHYSIGSSSY 1806 >ref|XP_006627498.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Lepisosteus oculatus] Length = 1905 Score = 57.8 bits (138), Expect = 6e-06 Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 5/163 (3%) Frame = -1 Query: 767 SSANYSPEPSTYEISASSYVDSRSNSITRSNRFTSPSPRPFPEVFSSTPYRPISDTTLDA 588 +S NYSP +Y ++ SY + + + S R+T SP P S +P P T Sbjct: 1714 TSPNYSPTSPSYSPTSPSYSPTSPSYSSTSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPK 1773 Query: 587 GLPSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLS-SGEVFS----RNFPTNEAGLP 423 P+S ++P+ + P S K++ PT P++ PK S + +S + PT+ P Sbjct: 1774 YTPTSPSYSPSSPEYTPTSPKYS-PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1832 Query: 422 PSFSFSTLCPKVVPKLPSGEVFSKNFPMNDQTGIPRSFSTSRY 294 S ++ PK P P+ S + T P S S Y Sbjct: 1833 TSPGYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTY 1875 >ref|XP_005693564.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1 [Capra hircus] Length = 1953 Score = 57.4 bits (137), Expect = 8e-06 Identities = 44/166 (26%), Positives = 73/166 (43%) Frame = -1 Query: 767 SSANYSPEPSTYEISASSYVDSRSNSITRSNRFTSPSPRPFPEVFSSTPYRPISDTTLDA 588 +S NY+P Y ++ SY + + S ++ SPR P+ + TP P + + Sbjct: 1775 TSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPS 1834 Query: 587 GLPSSMRFNPNPSSHLPFSSKFTYPTYPEFPDMVPKLSSGEVFSRNFPTNEAGLPPSFSF 408 P+S ++ P S+ P S ++T PT P++ PK S PT+ P S ++ Sbjct: 1835 YSPTSPKYTPTSPSYSPSSPEYT-PTSPKYSPTSPKYS---------PTSPKYSPTSPTY 1884 Query: 407 STLCPKVVPKLPSGEVFSKNFPMNDQTGIPRSFSTSRYDAQLRPNM 270 S PK P P+ +S P+ T S ++ Y PN+ Sbjct: 1885 SPTTPKYSPTSPT---YSPTSPVYTPTSPKYSPTSPTYSPTSPPNL 1927