BLASTX nr result
ID: Atropa21_contig00011513
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00011513
(3971 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 135 6e-93
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum] 116 3e-89
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ... 163 1e-77
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 163 2e-77
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum] 117 2e-76
gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobrom... 108 3e-75
gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobrom... 102 5e-75
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana... 110 2e-71
gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao] 102 5e-71
gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobrom... 107 3e-70
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum] 156 3e-69
gb|EOY19264.1| Uncharacterized protein TCM_044274 [Theobroma cacao] 108 7e-66
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera] 101 5e-65
gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, puta... 105 1e-64
gb|EOY19685.1| DNA/RNA polymerases superfamily protein, putative... 104 1e-64
gb|ABM55240.1| retrotransposon protein [Beta vulgaris] 98 3e-64
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 94 4e-64
gb|AAK51580.1|AC022352_16 Putative retroelement [Oryza sativa Ja... 94 4e-64
gb|ABB47095.2| retrotransposon protein, putative, Ty3-gypsy subc... 94 4e-64
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera] 100 2e-63
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 135 bits (340), Expect(5) = 6e-93
Identities = 85/209 (40%), Positives = 117/209 (55%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+E LKD D+ + YHP KANV+AD LSR S+GSL ++ I R +ARE+H+ A L V L E
Sbjct: 1393 LEFLKDYDMSVHYHPGKANVVADALSRVSMGSLAHVDIGDREMAREVHRLARLGVRLEEV 1452
Query: 2985 DDSRFTIQNIEVSSFVLEVKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LCI 2806
+ + + SS V EV D LL+L+ V + +V F G LR++G LC+
Sbjct: 1453 GNGGVVVVDGARSSLVDEVIAKQDLDSSLLELKALVKEGKVEVFSQGGDGALRYQGRLCV 1512
Query: 2805 SDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREMI 2626
+ GL + I+ E + S YSIH GS KMY I +FV +CQ+
Sbjct: 1513 PCVDGLREKILEEAHNSSYSIHPGSTKMYRDLRDVYWWGGMKKDIAKFVSGCHSCQQVKA 1572
Query: 2625 EHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EHQ+ GGL +IEI KWE +N+DF+ G
Sbjct: 1573 EHQRPGGLTQDIEIPTWKWEEINMDFVVG 1601
Score = 112 bits (281), Expect(5) = 6e-93
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -1
Query: 2369 YKGFQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYN 2190
+K FQ+GLGT++ L+T F+PQ DGQAERTI TLEDML CVL+ KG W+D+ LIEF+YN
Sbjct: 1668 WKSFQRGLGTRVKLTTAFHPQTDGQAERTIQTLEDMLRACVLELKGSWEDHLPLIEFSYN 1727
Query: 2189 NSYHSNIRLTLYEVRYERKCRS 2124
NSYHS+I + +E Y R+CRS
Sbjct: 1728 NSYHSSIGMAPFEALYGRRCRS 1749
Score = 111 bits (277), Expect(5) = 6e-93
Identities = 57/115 (49%), Positives = 87/115 (75%), Gaps = 2/115 (1%)
Frame = -2
Query: 2023 SQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQM 1844
+QSR K Y+DV+R+ LEF++ V+LKV PMKGV+RF +K +L RY+ PY+++ RIG++
Sbjct: 1784 AQSRRKSYADVRRRALEFRVGDWVYLKVSPMKGVVRFGKKGKLSPRYVGPYKVMRRIGKV 1843
Query: 1843 AY*LRLYLELEFIHLIFYVSMLWKCVRDPSQVVPVD-IQIIED-LSYEKVLVAII 1685
AY L L E++ +H +F+VSML KCV DP+ +V +D + ++ED L+YE+V V I+
Sbjct: 1844 AYELELPSEMDLVHPVFHVSMLRKCVGDPNAIVSLDVVGVVEDNLTYEEVPVQIL 1898
Score = 53.5 bits (127), Expect(5) = 6e-93
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = -2
Query: 2518 FDSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
F SI VVV+R+T AHFL V+ T +DY +LYI ++V+ HG+ + II D
Sbjct: 1609 FGSIWVVVDRMTKSAHFLPVKTTYGAEDYARLYIHDLVRLHGIPLSIISD 1658
Score = 21.9 bits (45), Expect(5) = 6e-93
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 2121 IGLFKVGEPESLGIYLVHQDRED 2053
+GLF+VGE LG LV + E+
Sbjct: 1751 VGLFEVGEVALLGPDLVMEALEE 1773
>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
Length = 1554
Score = 116 bits (290), Expect(5) = 3e-89
Identities = 54/82 (65%), Positives = 64/82 (78%)
Frame = -1
Query: 2369 YKGFQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYN 2190
+K F+KGLG+++NLST F PQ DGQAERTI TLEDML CV+DFKG WDD+ LIEF YN
Sbjct: 1323 WKSFKKGLGSKVNLSTAFYPQTDGQAERTIHTLEDMLRACVIDFKGNWDDHLPLIEFAYN 1382
Query: 2189 NSYHSNIRLTLYEVRYERKCRS 2124
NSYHS+I + YE Y R+C S
Sbjct: 1383 NSYHSSIHMAPYEALYGRRCIS 1404
Score = 114 bits (286), Expect(5) = 3e-89
Identities = 60/114 (52%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
Frame = -2
Query: 2023 SQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQM 1844
+QSR K Y DV+ + LEF++D V+LKV PMKGVMRF +K +L +YI PYRI RIG +
Sbjct: 1439 AQSRQKSYIDVRTRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPQYIGPYRIAKRIGNV 1498
Query: 1843 AY*LRLYLELEFIHLIFYVSMLWKCVRDPSQVVPVD-IQIIEDLSYEKVLVAII 1685
AY L L ELE +H +F++SML KC+ DPS ++P + I+I ++LSYE++ V I+
Sbjct: 1499 AYELELPQELEAVHPVFHISMLKKCIGDPSLILPTESIRIKDNLSYEEIPVQIL 1552
Score = 101 bits (252), Expect(5) = 3e-89
Identities = 61/143 (42%), Positives = 79/143 (55%)
Frame = -3
Query: 2967 IQNIEVSSFVLEVKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LCISDIAGL 2788
+ N SS V EVKE D I L+ + V + V FE G LR++G LC+ + GL
Sbjct: 1114 VANRAESSLVSEVKEKQDQDPIFLEFKANVQKQRVLAFEQGGDGVLRYQGRLCVPMVDGL 1173
Query: 2787 *D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREMIEHQKLG 2608
+ IM E + S YSIH GS KMYH I EFV + PNCQ+ +EHQ+
Sbjct: 1174 QERIMEEAHSSRYSIHPGSTKMYHDLREVYWWNGMKKGIAEFVAKCPNCQQVKVEHQRPV 1233
Query: 2607 GLL*NIEILM*KWEMVNIDFITG 2539
GL I++ KWEM+N+DFITG
Sbjct: 1234 GLAQRIKLPEWKWEMINMDFITG 1256
Score = 62.0 bits (149), Expect(5) = 3e-89
Identities = 28/54 (51%), Positives = 41/54 (75%)
Frame = -2
Query: 2530 SYCKFDSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
S+ + DSI V+V+++T AHFL VR TN+ +DY KLY++EIV+ HG+ + II D
Sbjct: 1260 SHRQHDSIWVIVDQMTKSAHFLPVRTTNIAEDYAKLYVQEIVRLHGIPISIISD 1313
Score = 28.1 bits (61), Expect(5) = 3e-89
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 2124 PIGLFKVGEPESLGIYLVHQDRE 2056
PIG F+VGE + +G LVHQ E
Sbjct: 1405 PIGWFEVGEAQLIGPDLVHQAME 1427
>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1515
Score = 163 bits (413), Expect(3) = 1e-77
Identities = 92/209 (44%), Positives = 129/209 (61%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+ELLKD D+ I+YHP KANV+AD+LSR S+GS T+++ +R LA+++H+ A L V +S
Sbjct: 1042 LELLKDYDLSILYHPGKANVVADSLSRLSMGSTTHIEEGRRELAKDMHRLACLGVRFTDS 1101
Query: 2985 DDSRFTIQNIEVSSFVLEVKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LCI 2806
+ + + SS + EVKE D ILL+L+ V + V FE G LR++G LC+
Sbjct: 1102 TEGGIAVTSKAESSLMSEVKEKQDQDPILLELKANVQKQRVLAFEQGGDGVLRYQGRLCV 1161
Query: 2805 SDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREMI 2626
+ GL + +M E + S YS+H GS KMY I EFV + PNCQ+ +
Sbjct: 1162 PMVDGLQERVMEEAHSSRYSVHPGSTKMYRDLREFYWWNGMKKGIAEFVAKCPNCQQVKV 1221
Query: 2625 EHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EHQ+ GGL NIE+ KWEM+N+DFITG
Sbjct: 1222 EHQRPGGLAQNIELPEWKWEMINMDFITG 1250
Score = 118 bits (295), Expect(3) = 1e-77
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = -1
Query: 2369 YKGFQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYN 2190
+K FQKGLG++++LST F+PQ DGQAERTI TLEDML CV+DFK WDD+ LIEF YN
Sbjct: 1317 WKSFQKGLGSKVSLSTAFHPQTDGQAERTIQTLEDMLRACVIDFKSNWDDHLPLIEFAYN 1376
Query: 2189 NSYHSNIRLTLYEVRYERKCRS 2124
NSYHS+I++ YE Y R+CRS
Sbjct: 1377 NSYHSSIQMAPYEALYGRRCRS 1398
Score = 60.5 bits (145), Expect(3) = 1e-77
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = -2
Query: 2515 DSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
DSI V+V+R+T AHFL VR T+ +DY KLYI+EIV+ HGV + II D
Sbjct: 1259 DSIWVIVDRMTKSAHFLPVRTTHSAEDYAKLYIQEIVRLHGVPISIISD 1307
Score = 83.6 bits (205), Expect = 7e-13
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 12/126 (9%)
Frame = -2
Query: 2131 VGPYWFVQGRRTR--VTW------NLFGPS----G*GR*SLFKSDYGHSQSRHKLYSDVQ 1988
+ PY + GRR R + W L GP + + + +QSR K Y+DV+
Sbjct: 1385 MAPYEALYGRRCRSPIGWFEVGEARLIGPDLVHQAMEKVKVIQERLKTAQSRQKSYTDVR 1444
Query: 1987 RQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQMAY*LRLYLELEF 1808
R+ LEF++D V+LKV PMKGVMRF +K +L RYI PYRI+ R+G +AY L L EL
Sbjct: 1445 RRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIVQRVGSVAYELELPQELAA 1504
Query: 1807 IHLIFY 1790
+ F+
Sbjct: 1505 VKFCFF 1510
>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 163 bits (413), Expect(3) = 2e-77
Identities = 92/209 (44%), Positives = 129/209 (61%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+ELLKD D+ I+YHP KANV+AD+LSR S+GS T+++ +R LA+++H+ A L V +S
Sbjct: 1048 LELLKDYDLSILYHPGKANVVADSLSRLSMGSTTHIEEGRRELAKDMHRLACLGVRFTDS 1107
Query: 2985 DDSRFTIQNIEVSSFVLEVKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LCI 2806
+ + + SS + EVKE D ILL+L+ V + V FE G LR++G LC+
Sbjct: 1108 TEGGIAVTSKAESSLMSEVKEKQDQDPILLELKANVQKQRVLAFEQGGDGVLRYQGRLCV 1167
Query: 2805 SDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREMI 2626
+ GL + +M E + S YS+H GS KMY I EFV + PNCQ+ +
Sbjct: 1168 PMVDGLQERVMEEAHSSRYSVHPGSTKMYRDLREFYWWNGMKKGIAEFVAKCPNCQQVKV 1227
Query: 2625 EHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EHQ+ GGL NIE+ KWEM+N+DFITG
Sbjct: 1228 EHQRPGGLAQNIELPEWKWEMINMDFITG 1256
Score = 118 bits (295), Expect(3) = 2e-77
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = -1
Query: 2369 YKGFQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYN 2190
+K FQKGLG++++LST F+PQ DGQAERTI TLEDML CV+DFK WDD+ LIEF YN
Sbjct: 1323 WKSFQKGLGSKVSLSTAFHPQTDGQAERTIQTLEDMLRACVIDFKSNWDDHLPLIEFAYN 1382
Query: 2189 NSYHSNIRLTLYEVRYERKCRS 2124
NSYHS+I++ YE Y R+CRS
Sbjct: 1383 NSYHSSIQMAPYEALYGRRCRS 1404
Score = 59.3 bits (142), Expect(3) = 2e-77
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = -2
Query: 2515 DSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
DSI V+V+R+T AHFL V+ T+ +DY KLYI+EIV+ HGV + II D
Sbjct: 1265 DSIWVIVDRMTKSAHFLPVKTTHSAEDYAKLYIQEIVRLHGVPISIISD 1313
Score = 119 bits (297), Expect = 1e-23
Identities = 70/162 (43%), Positives = 102/162 (62%), Gaps = 13/162 (8%)
Frame = -2
Query: 2131 VGPYWFVQGRRTR--VTW------NLFGPS----G*GR*SLFKSDYGHSQSRHKLYSDVQ 1988
+ PY + GRR R + W L GP + + + +QSR K Y+DV+
Sbjct: 1391 MAPYEALYGRRCRSPIGWFEVGEARLIGPDLVHQAMEKVKVIQERLKTAQSRQKSYTDVR 1450
Query: 1987 RQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQMAY*LRLYLELEF 1808
R+ LEF++D V+LKV PMKGVMRF +K +L RYI PYRI+ R+G +AY L L EL
Sbjct: 1451 RRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIVQRVGSVAYELELPQELAA 1510
Query: 1807 IHLIFYVSMLWKCVRDPSQVVPVD-IQIIEDLSYEKVLVAII 1685
+H +F++SML KC+ DPS ++P + ++I ++LSYE+V V I+
Sbjct: 1511 VHPVFHISMLKKCIGDPSLILPTESVKIKDNLSYEEVPVQIL 1552
>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
Length = 1771
Score = 117 bits (294), Expect(4) = 2e-76
Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 3/212 (1%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRR--SIGSLTYLQIKKRVLARELHQAANLKV*LF 2992
IELLKD D+ I+YHP KANV+AD LSR+ S+GSL +L +++R LA ++ AN V L
Sbjct: 1216 IELLKDYDLSILYHPGKANVVADALSRKAVSMGSLAFLSVEERPLALDIQSLANSMVRL- 1274
Query: 2991 ESDDSRFTIQNIEVSSFVLE-VKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG* 2815
+ DSR + + V S +L+ ++ + D L+ LRD+V ++ + G L+F G
Sbjct: 1275 DISDSRCVLAFMRVQSSLLDRIRGCQFEDDTLVALRDRVLADDGGQATLDPDGVLKFAGR 1334
Query: 2814 LCISDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQR 2635
+C+ + L I++E + S YSIH G+ KMY I +FV + CQ+
Sbjct: 1335 ICVPRVGDLIQLILSEAHESRYSIHPGTAKMYRDLRQHYWWSGMRRDIADFVSRCLCCQQ 1394
Query: 2634 EMIEHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EH + GG + I KWE + +DF+ G
Sbjct: 1395 VKAEHLRPGGEFQRLPIPEWKWERITMDFVVG 1426
Score = 103 bits (258), Expect(4) = 2e-76
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = -1
Query: 2369 YKGFQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYN 2190
++ FQ+ LGT+++LST+F+PQ DGQ+ERTI LEDML CV+DF G W+ + L EF YN
Sbjct: 1493 WRAFQEELGTRVHLSTSFHPQTDGQSERTIQVLEDMLRACVMDFGGQWEQFLPLAEFAYN 1552
Query: 2189 NSYHSNIRLTLYEVRYERKCRS 2124
NSYHS+I++ +E Y R+CRS
Sbjct: 1553 NSYHSSIQMAPFEALYGRRCRS 1574
Score = 87.4 bits (215), Expect(4) = 2e-76
Identities = 49/114 (42%), Positives = 75/114 (65%), Gaps = 1/114 (0%)
Frame = -2
Query: 2023 SQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQM 1844
+QSRH+ Y+D +R+ L F + VFL+V PMKGVMRF R+ +L RYI P+ I+ +G++
Sbjct: 1609 AQSRHQSYADQRRRPLRFSVGDRVFLRVSPMKGVMRFGRRGKLSPRYIGPFEILRTVGEV 1668
Query: 1843 AY*LRLYLELEFIHLIFYVSMLWKCVRDPSQVVPVD-IQIIEDLSYEKVLVAII 1685
AY L L IH +F+VSML + V D S V+ D +++ + L++ + VAI+
Sbjct: 1669 AYELALPPVFSAIHPVFHVSMLRRYVPDESHVLQYDAVELDDRLTFVEEPVAIL 1722
Score = 49.7 bits (117), Expect(4) = 2e-76
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = -2
Query: 2515 DSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
DSI V+V+RLT AHFL V T + ++YI+E+V+ HGV + II D
Sbjct: 1435 DSIWVIVDRLTKSAHFLPVHTTFSAERLARIYIREVVRLHGVPVSIISD 1483
>gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 679
Score = 108 bits (271), Expect(5) = 3e-75
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 1/210 (0%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+ELLKD D I+YHP KANV+AD LSR+S+GSL ++ I +R L RE+H ++ V L E
Sbjct: 130 MELLKDYDCTILYHPGKANVVADALSRKSMGSLAHISIGRRSLVREIHSLGDIGVRL-EV 188
Query: 2985 DDSRFTIQNIEVSSFVLE-VKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LC 2809
++ + + V +++ +KE D +++ + + F G LR+ L
Sbjct: 189 AETNALLAHFRVRPILMDRIKEAQSKDEFVIKALEDPRGRKGKMFTKGTDGVLRYGTRLY 248
Query: 2808 ISDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREM 2629
+ D GL I+ E + + Y +H G+ KMY + EFV + CQ+
Sbjct: 249 VPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVK 308
Query: 2628 IEHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EHQK GLL + + KWE + +DF+TG
Sbjct: 309 AEHQKPAGLLQPLPVPEWKWEHIAMDFVTG 338
Score = 102 bits (253), Expect(5) = 3e-75
Identities = 58/114 (50%), Positives = 80/114 (70%), Gaps = 1/114 (0%)
Frame = -2
Query: 2023 SQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQM 1844
+QSR K Y+D +R+DLEFQ+ VFLK P KGVMRF +K +L RYI P++I+ ++G +
Sbjct: 521 AQSRQKSYADNRRRDLEFQVGDHVFLKFSPTKGVMRFGKKGKLSPRYIGPFKILEKVGAV 580
Query: 1843 AY*LRLYLELEFIHLIFYVSMLWKCVRDPSQVVPVD-IQIIEDLSYEKVLVAII 1685
AY L L +L IH +F+VSML K DPS V+ + IQ+ +DLSYE+ VAI+
Sbjct: 581 AYRLALPPDLSNIHPVFHVSMLRKYNLDPSHVIRYETIQLQDDLSYEEQPVAIL 634
Score = 92.0 bits (227), Expect(5) = 3e-75
Identities = 41/78 (52%), Positives = 57/78 (73%)
Frame = -1
Query: 2357 QKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYNNSYH 2178
Q+ LGT+++ ST F+PQ DGQ+ERTI TLEDML CV+D W+ Y L+EF YNNS+
Sbjct: 409 QEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSFQ 468
Query: 2177 SNIRLTLYEVRYERKCRS 2124
++I++ +E Y R+CRS
Sbjct: 469 TSIQMAPFEALYGRRCRS 486
Score = 50.1 bits (118), Expect(5) = 3e-75
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = -2
Query: 2518 FDSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
+DSI +VV++LT AHFL V+ T Y ++Y+ EIV+ HG+ + I+ D
Sbjct: 346 YDSIWIVVDQLTKSAHFLPVKTTYGAAHYARVYVDEIVRLHGIPISIVSD 395
Score = 22.3 bits (46), Expect(5) = 3e-75
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 2124 PIGLFKVGEPESLGIYLVHQDREDKAY 2044
PIG +VGE + LG LV QD +K +
Sbjct: 487 PIGWLEVGERKLLGPELV-QDATEKIH 512
>gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1537
Score = 102 bits (253), Expect(4) = 5e-75
Identities = 72/217 (33%), Positives = 106/217 (48%)
Frame = -3
Query: 3189 REW*KSKNIELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAAN 3010
R+W +EL+KD D+ I YHPRKANV+AD LSR+S SL L+ + E+ +
Sbjct: 971 RQW-----LELIKDYDLVIDYHPRKANVVADALSRKSSSSLATLRSSYFSMLLEMK---S 1022
Query: 3009 LKV*LFESDDSRFTIQNIEVSSFVLEVKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFL 2830
L + L +D + S + +++E +D L Q K+ + + F ++ G L
Sbjct: 1023 LGIQLNNGEDGTLLASFVVRPSLLNQIRELQKSDDWLKQEVQKLQDGKASEFRLSDDGTL 1082
Query: 2829 RFRG*LCISDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQW 2650
R +C+ L I+ E +YS Y++H GS KMY I EFV +
Sbjct: 1083 MLRDRICVPKDDQLRRAILEEAHYSAYALHPGSTKMYRTIKESYWWPGMERDIAEFVAKC 1142
Query: 2649 PNCQREMIEHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
CQ+ EHQK G L + I KWE V +DF+ G
Sbjct: 1143 LTCQQIKAEHQKPSGTLQPLSIPEWKWEHVTMDFVLG 1179
Score = 101 bits (252), Expect(4) = 5e-75
Identities = 55/114 (48%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Frame = -1
Query: 2360 FQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYNNSY 2181
FQ+ LGT++ ST F+PQ DGQ+ERTI TLEDML CV+DF G WD + L+EF YNNS+
Sbjct: 1249 FQEALGTKLRFSTAFHPQTDGQSERTIQTLEDMLRACVIDFIGSWDRHLPLVEFAYNNSF 1308
Query: 2180 HSNIRLTLYEVRYERKCRSLLVCSR*ANQS--HLEFIWSIRIGKIKLIQE*LWT 2025
S+I + YE Y RKCR+ L + ++E I + K+K+I+E L T
Sbjct: 1309 QSSIGMAPYEALYGRKCRTPLCWDEVGERKLVNVELI-DLTNDKVKVIRERLKT 1361
Score = 99.4 bits (246), Expect(4) = 5e-75
Identities = 57/114 (50%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
Frame = -2
Query: 2023 SQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQM 1844
+Q R K YSD +R+DLEF++D VFLKV P KGV+RF ++ +L RYI P+ II RIG +
Sbjct: 1362 AQDRQKNYSDKRRKDLEFEVDDKVFLKVSPWKGVIRFAKRGKLNPRYIGPFHIIERIGPV 1421
Query: 1843 AY*LRLYLELEFIHLIFYVSMLWKCVRDPSQVVPV-DIQIIEDLSYEKVLVAII 1685
AY L L EL+ IH F+VSML K V DPS ++ I++ EDL +E + I+
Sbjct: 1422 AYRLELPPELDRIHNAFHVSMLKKYVPDPSHILETPPIELHEDLKFEVQPIRIL 1475
Score = 51.2 bits (121), Expect(4) = 5e-75
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = -2
Query: 2515 DSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
D+I V+V+RLT AHFLA+ T I+ +LYI EIV+ HGV + I+ D
Sbjct: 1188 DAIWVIVDRLTKSAHFLAIHSTYSIERLARLYIDEIVRLHGVPVSIVSD 1236
>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 110 bits (275), Expect(4) = 2e-71
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+E +KD D++I YHP KANV+AD LSRR + ++T LQ +HQ +L++ + E
Sbjct: 597 LEFVKDYDLDIQYHPGKANVVADALSRRPVNAITTLQ-------EVIHQLDSLQIQVVER 649
Query: 2985 DDSRFTIQNIEVSSFVLE-VKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LC 2809
+ + S +L+ ++ D +L+ L+ + +++ K G L + LC
Sbjct: 650 EGEAQCFAPLMARSELLDDIRAKQDEDPVLVDLKRVAREKPTVGYQLDKNGHLWYGDRLC 709
Query: 2808 ISDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREM 2629
+ D+ GL +M E + +++H GS KMY I EFV + CQR
Sbjct: 710 VPDVDGLRQQVMDEAHKIAFAVHPGSTKMYRDLKERYWWLGMKLNIAEFVAKCDTCQRVK 769
Query: 2628 IEHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EH++ GGLL +E+ KWE + +DFITG
Sbjct: 770 AEHRRPGGLLKPLEVPEWKWENITMDFITG 799
Score = 99.8 bits (247), Expect(4) = 2e-71
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = -1
Query: 2369 YKGFQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYN 2190
+KG QK T+ +LST F+PQ DGQ+ERTI TLEDML CVL+ G WDD+ + EF YN
Sbjct: 866 WKGLQKAFETKTDLSTAFHPQTDGQSERTIQTLEDMLRACVLEVGGSWDDFLSVAEFAYN 925
Query: 2189 NSYHSNIRLTLYEVRYERKCRSLL 2118
NSYH+++ + +E Y RKCR+ L
Sbjct: 926 NSYHASLGMPPFEALYGRKCRTPL 949
Score = 83.6 bits (205), Expect(4) = 2e-71
Identities = 47/122 (38%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Frame = -2
Query: 2047 LFKSDYGHSQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYR 1868
L + + +Q R K ++D++R+ LEF + V+L+ PMKGV RF +K +L RY+ P+
Sbjct: 974 LIRKNLKAAQDRQKSWADIRRRPLEFAVGDRVYLRASPMKGVKRFGQKGKLSPRYVGPFD 1033
Query: 1867 IICRIGQMAY*LRLYLELEFIHLIFYVSMLWKCVRDPSQVVPVDIQIIED-LSYEKVLVA 1691
II RIG++AY LRL + +H +F+VSML KC+ + ++++D LSY + V
Sbjct: 1034 IIERIGKLAYRLRLPESMSRVHNVFHVSMLKKCLSSTDVESQFNPEMLQDNLSYIEKPVK 1093
Query: 1690 II 1685
I+
Sbjct: 1094 IL 1095
Score = 48.1 bits (113), Expect(4) = 2e-71
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = -2
Query: 2515 DSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
D I V+V+RLT AHFL +V IK + +LY+ IV+ HGV + I+ D
Sbjct: 808 DMIWVIVDRLTKSAHFLPCKVDMPIKKFTQLYLDNIVRLHGVPLSIVSD 856
>gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 1263
Score = 102 bits (253), Expect(5) = 5e-71
Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 1/210 (0%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+ELLKD D I+YHP KANV+AD SR+S+GSL ++ +R L +E+H ++ V L E
Sbjct: 739 MELLKDYDCTILYHPGKANVVADAFSRKSMGSLAHISTGRRSLVKEIHSLGDIGVHL-EV 797
Query: 2985 DDSRFTIQNIEVSSFVLE-VKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LC 2809
++ + + V +++ +KE D + + + + F G LR+ L
Sbjct: 798 AETNALLAHFRVRPILMDKIKEAQSKDEFVTKAIEDPQGRKGKMFTKGTDGVLRYGTRLY 857
Query: 2808 ISDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREM 2629
+ D GL I+ E + + Y +H G+ KMY + EFV + CQ+
Sbjct: 858 VPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVK 917
Query: 2628 IEHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EHQKL LL + + KWE + +DF+TG
Sbjct: 918 AEHQKLTRLLQPLPVPKWKWEHIAMDFVTG 947
Score = 101 bits (251), Expect(5) = 5e-71
Identities = 59/114 (51%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
Frame = -2
Query: 2023 SQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQM 1844
+QSR K Y D +R+DLEFQ+ VFLKV P KGVMRF +K +L RYI P+ I+ R+G++
Sbjct: 1105 AQSRQKSYVDNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILERVGEV 1164
Query: 1843 AY*LRLYLELEFIHLIFYVSMLWKCVRDPSQVVPVD-IQIIEDLSYEKVLVAII 1685
AY L L +L IH +F VSML K DPS V+ + IQ+ +DL+YE+ VAI+
Sbjct: 1165 AYRLALPPDLSNIHPVFQVSMLRKYNPDPSHVIWYETIQLQDDLTYEEQPVAIL 1218
Score = 91.7 bits (226), Expect(5) = 5e-71
Identities = 41/78 (52%), Positives = 58/78 (74%)
Frame = -1
Query: 2357 QKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYNNSYH 2178
Q+ LGT+++ STTF+PQ DGQ+E+TI TLEDML CV+D W+ Y L+EF YNNS+
Sbjct: 993 QEPLGTKLDFSTTFHPQTDGQSEQTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSFQ 1052
Query: 2177 SNIRLTLYEVRYERKCRS 2124
++I++ +E Y R+CRS
Sbjct: 1053 TSIQMAPFEALYGRRCRS 1070
Score = 43.5 bits (101), Expect(5) = 5e-71
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = -2
Query: 2518 FDSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQ 2402
+DSI +VV+RLT AHFL V++T Y ++Y+ EI+Q
Sbjct: 955 YDSIWIVVDRLTKSAHFLPVKITYGAAQYARVYVDEILQ 993
Score = 22.3 bits (46), Expect(5) = 5e-71
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 2124 PIGLFKVGEPESLGIYLVHQDREDKAY 2044
PIG +VGE + LG LV QD +K +
Sbjct: 1071 PIGWLEVGERKLLGPKLV-QDATEKIH 1096
>gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 937
Score = 107 bits (266), Expect(4) = 3e-70
Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 1/210 (0%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+ELLKD D I++HP KANV+AD LSR+S+GSL ++ I +R L +E+H ++ V L E
Sbjct: 360 MELLKDYDCTILHHPGKANVVADALSRKSMGSLAHISIGRRSLVKEIHSLGDIGVRL-EV 418
Query: 2985 DDSRFTIQNIEVSSFVLE-VKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LC 2809
++ + + V +++ +KE D +++ + + F G LR+ L
Sbjct: 419 AETNALLAHFRVRPILMDRIKEAQSKDEFVIKALEDPRGKKGKMFTKGTDGVLRYGTRLY 478
Query: 2808 ISDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREM 2629
+ D GL I+ E + + Y IH G+ KMY + EFV + CQ+
Sbjct: 479 VPDSDGLRREILEEAHMAAYVIHPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVK 538
Query: 2628 IEHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EHQK GLL + + KWE + +DF+TG
Sbjct: 539 AEHQKPAGLLQPLPVPEWKWEHIAMDFVTG 568
Score = 90.1 bits (222), Expect(4) = 3e-70
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = -2
Query: 2023 SQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQM 1844
+QSR K Y+D +R+DLEFQ+ VFLKV P KGVMRF +K +L RYI P+ I+ ++G +
Sbjct: 751 AQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILEKVGVV 810
Query: 1843 AY*LRLYLELEFIHLIFYVSMLWKCVRDPSQVV 1745
AY L L +L IH +F+VSML K DPS V+
Sbjct: 811 AYRLALPPDLSNIHPVFHVSMLRKYNPDPSHVI 843
Score = 89.0 bits (219), Expect(4) = 3e-70
Identities = 40/78 (51%), Positives = 56/78 (71%)
Frame = -1
Query: 2357 QKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYNNSYH 2178
Q+ LGT+++ ST F+PQ DGQ+E TI TLEDML CV+D W+ Y L+EF YNNS+
Sbjct: 639 QEALGTKLDFSTAFHPQTDGQSEWTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSFQ 698
Query: 2177 SNIRLTLYEVRYERKCRS 2124
++I++ +E Y R+CRS
Sbjct: 699 TSIQMAPFEALYGRRCRS 716
Score = 52.0 bits (123), Expect(4) = 3e-70
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -2
Query: 2518 FDSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
+DSI +VV+RLT AHFL V+ T Y ++Y+ EIV+ HG+ + I+ D
Sbjct: 576 YDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSD 625
>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
Length = 4543
Score = 156 bits (394), Expect(3) = 3e-69
Identities = 91/209 (43%), Positives = 125/209 (59%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+ELLKD + I+YHP KANV+AD+LSR S+GS +++ +R L +++H+ A L V +S
Sbjct: 824 LELLKDYVLSILYHPGKANVVADSLSRLSMGSTAHIEEGRRELTKDVHRLACLGVRFTDS 883
Query: 2985 DDSRFTIQNIEVSSFVLEVKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LCI 2806
+ N SS VLEVK+ D ILL+L+ V + V FE G LR++G LC+
Sbjct: 884 AKGGIAVANRAESSLVLEVKKKQDQDPILLELKANVQKQRVLAFEQGGDGALRYQGRLCV 943
Query: 2805 SDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREMI 2626
+ GL + IM E + S YS+H GS KMY I EFV + PNCQ+ +
Sbjct: 944 PMVDGLQEKIMEEAHSSRYSVHPGSTKMYRDLREVYWWNGMKKGIAEFVAKCPNCQQVKV 1003
Query: 2625 EHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EHQ+ GGL IE+ KWEM+N+DFITG
Sbjct: 1004 EHQRPGGLAQRIELPEWKWEMINMDFITG 1032
Score = 156 bits (394), Expect(3) = 3e-69
Identities = 91/209 (43%), Positives = 125/209 (59%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+ELLKD + I+YHP KANV+AD+LSR S+GS +++ +R L +++H+ A L V +S
Sbjct: 2334 LELLKDYVLSILYHPGKANVVADSLSRLSMGSTAHIEEGRRELTKDVHRLACLGVRFTDS 2393
Query: 2985 DDSRFTIQNIEVSSFVLEVKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LCI 2806
+ N SS VLEVK+ D ILL+L+ V + V FE G LR++G LC+
Sbjct: 2394 AKGGIAVANRAESSLVLEVKKKQDQDPILLELKANVQKQRVLAFEQGGDGALRYQGRLCV 2453
Query: 2805 SDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREMI 2626
+ GL + IM E + S YS+H GS KMY I EFV + PNCQ+ +
Sbjct: 2454 PMVDGLQEKIMEEAHSSRYSVHPGSTKMYRDLREVYWWNGMKKGIAEFVAKCPNCQQVKV 2513
Query: 2625 EHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EHQ+ GGL IE+ KWEM+N+DFITG
Sbjct: 2514 EHQRPGGLAQRIELPEWKWEMINMDFITG 2542
Score = 156 bits (394), Expect(3) = 3e-69
Identities = 91/209 (43%), Positives = 125/209 (59%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+ELLKD + I+YHP KANV+AD+LSR S+GS +++ +R L +++H+ A L V +S
Sbjct: 3844 LELLKDYVLSILYHPGKANVVADSLSRLSMGSTAHIEEGRRELTKDVHRLACLGVRFTDS 3903
Query: 2985 DDSRFTIQNIEVSSFVLEVKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LCI 2806
+ N SS VLEVK+ D ILL+L+ V + V FE G LR++G LC+
Sbjct: 3904 AKGGIAVANRAESSLVLEVKKKQDQDPILLELKANVQKQRVLAFEQGGDGALRYQGRLCV 3963
Query: 2805 SDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREMI 2626
+ GL + IM E + S YS+H GS KMY I EFV + PNCQ+ +
Sbjct: 3964 PMVDGLQEKIMEEAHSSRYSVHPGSTKMYRDLREVYWWNGMKKGIAEFVAKCPNCQQVKV 4023
Query: 2625 EHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EHQ+ GGL IE+ KWEM+N+DFITG
Sbjct: 4024 EHQRPGGLAQRIELPEWKWEMINMDFITG 4052
Score = 109 bits (272), Expect(3) = 3e-69
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = -1
Query: 2354 KGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYNNSYHS 2175
KGLG+++NLST F+PQ DGQAE TI LEDML CV+DFKG WDD+ LIEF YNNSYH
Sbjct: 1077 KGLGSKVNLSTAFHPQTDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHP 1136
Query: 2174 NIRLTLYEVRYERKCRS 2124
+I++ YE Y R+CRS
Sbjct: 1137 SIQMAPYEALYGRRCRS 1153
Score = 109 bits (272), Expect(3) = 3e-69
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = -1
Query: 2354 KGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYNNSYHS 2175
KGLG+++NLST F+PQ DGQAE TI LEDML CV+DFKG WDD+ LIEF YNNSYH
Sbjct: 2587 KGLGSKVNLSTAFHPQTDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHP 2646
Query: 2174 NIRLTLYEVRYERKCRS 2124
+I++ YE Y R+CRS
Sbjct: 2647 SIQMAPYEALYGRRCRS 2663
Score = 109 bits (272), Expect(3) = 3e-69
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = -1
Query: 2354 KGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYNNSYHS 2175
KGLG+++NLST F+PQ DGQAE TI LEDML CV+DFKG WDD+ LIEF YNNSYH
Sbjct: 4097 KGLGSKVNLSTAFHPQTDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHP 4156
Query: 2174 NIRLTLYEVRYERKCRS 2124
+I++ YE Y R+CRS
Sbjct: 4157 SIQMAPYEALYGRRCRS 4173
Score = 48.1 bits (113), Expect(3) = 3e-69
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = -2
Query: 2515 DSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEI 2408
DSI V+V+R+T AHFL V+ TN +DY KLY++EI
Sbjct: 1041 DSIWVIVDRMTKSAHFLPVKTTNTTEDYAKLYVQEI 1076
Score = 48.1 bits (113), Expect(3) = 3e-69
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = -2
Query: 2515 DSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEI 2408
DSI V+V+R+T AHFL V+ TN +DY KLY++EI
Sbjct: 2551 DSIWVIVDRMTKSAHFLPVKTTNTTEDYAKLYVQEI 2586
Score = 48.1 bits (113), Expect(3) = 3e-69
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = -2
Query: 2515 DSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEI 2408
DSI V+V+R+T AHFL V+ TN +DY KLY++EI
Sbjct: 4061 DSIWVIVDRMTKSAHFLPVKTTNTTEDYAKLYVQEI 4096
Score = 119 bits (299), Expect = 8e-24
Identities = 73/162 (45%), Positives = 101/162 (62%), Gaps = 13/162 (8%)
Frame = -2
Query: 2131 VGPYWFVQGRRTR--VTW------NLFGPS----G*GR*SLFKSDYGHSQSRHKLYSDVQ 1988
+ PY + GRR R + W L GP + + K +QSR K Y+DV+
Sbjct: 1140 MAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKSYTDVR 1199
Query: 1987 RQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQMAY*LRLYLELEF 1808
R+ LEF++D V+LKV PMKGVMRF +K +L RYI PYRI RIG +AY L L EL
Sbjct: 1200 RRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGNVAYELELPQELAA 1259
Query: 1807 IHLIFYVSMLWKCVRDPSQVVPVD-IQIIEDLSYEKVLVAII 1685
+H +F++SML KC+ DPS ++P + I+I ++LSYE+V V I+
Sbjct: 1260 VHPVFHISMLKKCIGDPSLILPTESIKINDNLSYEEVPVQIL 1301
Score = 119 bits (299), Expect = 8e-24
Identities = 73/162 (45%), Positives = 101/162 (62%), Gaps = 13/162 (8%)
Frame = -2
Query: 2131 VGPYWFVQGRRTR--VTW------NLFGPS----G*GR*SLFKSDYGHSQSRHKLYSDVQ 1988
+ PY + GRR R + W L GP + + K +QSR K Y+DV+
Sbjct: 2650 MAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKSYTDVR 2709
Query: 1987 RQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQMAY*LRLYLELEF 1808
R+ LEF++D V+LKV PMKGVMRF +K +L RYI PYRI RIG +AY L L EL
Sbjct: 2710 RRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGNVAYELELPQELAA 2769
Query: 1807 IHLIFYVSMLWKCVRDPSQVVPVD-IQIIEDLSYEKVLVAII 1685
+H +F++SML KC+ DPS ++P + I+I ++LSYE+V V I+
Sbjct: 2770 VHPVFHISMLKKCIGDPSLILPTESIKINDNLSYEEVPVQIL 2811
Score = 119 bits (299), Expect = 8e-24
Identities = 73/162 (45%), Positives = 101/162 (62%), Gaps = 13/162 (8%)
Frame = -2
Query: 2131 VGPYWFVQGRRTR--VTW------NLFGPS----G*GR*SLFKSDYGHSQSRHKLYSDVQ 1988
+ PY + GRR R + W L GP + + K +QSR K Y+DV+
Sbjct: 4160 MAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKSYTDVR 4219
Query: 1987 RQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQMAY*LRLYLELEF 1808
R+ LEF++D V+LKV PMKGVMRF +K +L RYI PYRI RIG +AY L L EL
Sbjct: 4220 RRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGNVAYELELPQELAA 4279
Query: 1807 IHLIFYVSMLWKCVRDPSQVVPVD-IQIIEDLSYEKVLVAII 1685
+H +F++SML KC+ DPS ++P + I+I ++LSYE+V V I+
Sbjct: 4280 VHPVFHISMLKKCIGDPSLILPTESIKINDNLSYEEVPVQIL 4321
>gb|EOY19264.1| Uncharacterized protein TCM_044274 [Theobroma cacao]
Length = 860
Score = 108 bits (270), Expect(5) = 7e-66
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 1/210 (0%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+ELLKD D I+YHP KANV+AD LSR+S+GSL ++ I +R L RE+H ++ V L E
Sbjct: 341 MELLKDYDCTILYHPGKANVVADALSRKSMGSLAHISIGRRSLVREIHSLGDIGVRL-EV 399
Query: 2985 DDSRFTIQNIEVSSFVLE-VKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LC 2809
++ + + V +++ +KE D +++ + + F G LR+ L
Sbjct: 400 AETSALLAHFRVRPILMDKIKEAQSKDEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLY 459
Query: 2808 ISDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREM 2629
+ D GL I+ E + + Y +H G+ KMY + EFV + CQ+
Sbjct: 460 VPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVK 519
Query: 2628 IEHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EHQK GLL + + KWE + +DF+TG
Sbjct: 520 AEHQKPAGLLQPLPVPEWKWEHIAMDFVTG 549
Score = 92.8 bits (229), Expect(5) = 7e-66
Identities = 41/78 (52%), Positives = 57/78 (73%)
Frame = -1
Query: 2357 QKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYNNSYH 2178
Q+ LGT+++ ST F+PQ DGQ+ERTI TLEDML CV+D W+ Y L+EF YNNS+
Sbjct: 620 QEALGTKLDFSTAFHPQTDGQSERTIKTLEDMLRACVIDLGVKWEQYLPLVEFAYNNSFQ 679
Query: 2177 SNIRLTLYEVRYERKCRS 2124
++I++ +E Y R+CRS
Sbjct: 680 TSIQMAAFEALYGRRCRS 697
Score = 67.8 bits (164), Expect(5) = 7e-66
Identities = 40/93 (43%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Frame = -2
Query: 1960 YLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQMAY*LRLYLELEFIHLIFYVSM 1781
+++ K+L + VMRF +K +L RYI P+ I+ ++G +AY L L +L IH +F+VSM
Sbjct: 723 HMIRQKMLTAQRVMRFGKKGKLSPRYIGPFEILEKVGAVAYRLALPPDLSNIHPVFHVSM 782
Query: 1780 LWKCVRDPSQVVPVD-IQIIEDLSYEKVLVAII 1685
L K DPS V+ + IQ+ DL+YE+ VAI+
Sbjct: 783 LRKYNPDPSHVIRYETIQLQNDLTYEEQPVAIL 815
Score = 52.0 bits (123), Expect(5) = 7e-66
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -2
Query: 2518 FDSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
+DSI +VV+RLT AHFL V+ T Y ++Y+ EIV+ HG+ + I+ D
Sbjct: 557 YDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSD 606
Score = 22.3 bits (46), Expect(5) = 7e-66
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 2124 PIGLFKVGEPESLGIYLVHQDREDKAY 2044
PIG +VGE + LG LV QD +K +
Sbjct: 698 PIGWLEVGERKLLGPELV-QDATEKIH 723
>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
Length = 1573
Score = 101 bits (252), Expect(4) = 5e-65
Identities = 60/117 (51%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Frame = -1
Query: 2369 YKGFQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYN 2190
++ Q+ LGTQ+N ST F+PQ DGQ+ER I LEDML CVLDF G W DY L EF YN
Sbjct: 1344 WQSLQRALGTQLNFSTVFHPQTDGQSERVIQILEDMLRACVLDFGGNWADYLPLAEFAYN 1403
Query: 2189 NSYHSNIRLTLYEVRYERKCRSLLVCSR*ANQSHL--EFIWSIRIGKIKLIQE*LWT 2025
N Y S+I + YE Y R CRS L C +SHL I KI+LI+E L T
Sbjct: 1404 NXYQSSIGMAPYEALYGRPCRSPL-CWIEMGESHLLGPEIVQETTEKIQLIKEKLKT 1459
Score = 89.7 bits (221), Expect(4) = 5e-65
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = -2
Query: 2047 LFKSDYGHSQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYR 1868
L K +Q R K Y+D +R+ LEF+ VF+KV P +G+ RF +K +L R++ P++
Sbjct: 1452 LIKEKLKTAQDRQKNYADKRRRPLEFEEGDWVFVKVSPRRGIFRFGKKGKLAPRFVGPFQ 1511
Query: 1867 IICRIGQMAY*LRLYLELEFIHLIFYVSMLWKCVRDPSQVVPV-DIQIIEDLSY 1709
I R+G + Y L L +L +H +F+VSML KC DP+ VV + D+QI ED SY
Sbjct: 1512 IDKRVGPVTYKLILPQQLSLVHDVFHVSMLRKCTPDPTWVVDLQDVQISEDTSY 1565
Score = 77.0 bits (188), Expect(4) = 5e-65
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 2/211 (0%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+E L+D D + YHP KANV+AD LSR+S G L L +++ + + V
Sbjct: 1071 METLEDYDFALHYHPGKANVVADALSRKSYGQLFSLGLREFEMYAVIEDFELCLV----Q 1126
Query: 2985 DDSRFTIQNIEVSSFVLE-VKE*HYADLILLQLRDKV*QNEVT-TFEVTKYGFLRFRG*L 2812
+ + +I V++ + E D L +++ ++ E+ + + + G +RF+G L
Sbjct: 1127 EGRGPCLYSISARPMVIQRIVEAQVHDEFLEKVKAQLVAGEIDENWSMYEDGSVRFKGRL 1186
Query: 2811 CISDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQRE 2632
C+ L + ++A+ + + Y+IH G+ KMY I +FV CQ+
Sbjct: 1187 CVPKDVELRNELLADAHRAKYTIHPGNTKMYQDLKRQFXWSGMKRDIAQFVANCQICQQV 1246
Query: 2631 MIEHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EHQ+ LL + I KW+ + +DF+ G
Sbjct: 1247 KAEHQRPAELLQPLPIPKWKWDNITMDFVIG 1277
Score = 52.0 bits (123), Expect(4) = 5e-65
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -2
Query: 2521 KFDSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
K + + V+V+RLT AHFLA++ T+ + KLYI+EIV+ HG+ + I+ D
Sbjct: 1284 KKNGVWVIVDRLTKSAHFLAMKTTDSMNSLAKLYIQEIVRLHGIPVSIVSD 1334
>gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
cacao]
Length = 521
Score = 105 bits (262), Expect(5) = 1e-64
Identities = 59/114 (51%), Positives = 81/114 (71%), Gaps = 1/114 (0%)
Frame = -2
Query: 2023 SQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQM 1844
+QSRHK Y+D +R+DLEFQ+ VFLKV P KGVMRF +K +L RYI P+ I+ ++G +
Sbjct: 363 AQSRHKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILDKVGTV 422
Query: 1843 AY*LRLYLELEFIHLIFYVSMLWKCVRDPSQVVPVD-IQIIEDLSYEKVLVAII 1685
AY L L +L IH +F+VSML K DPS V+ + IQ+ +DL+YE+ VAI+
Sbjct: 423 AYRLALPPDLSNIHPVFHVSMLRKYNPDPSHVIRYETIQLQDDLTYEEQPVAIL 476
Score = 92.0 bits (227), Expect(5) = 1e-64
Identities = 41/78 (52%), Positives = 57/78 (73%)
Frame = -1
Query: 2357 QKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYNNSYH 2178
Q+ LGT+++ ST F+PQ DGQ+ERTI TLEDML CV+D W+ Y L+EF YNNS+
Sbjct: 251 QEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSFQ 310
Query: 2177 SNIRLTLYEVRYERKCRS 2124
++I++ +E Y R+CRS
Sbjct: 311 TSIQMAPFEALYGRRCRS 328
Score = 67.8 bits (164), Expect(5) = 1e-64
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Frame = -3
Query: 3078 IGSLTYLQIKKRVLARELHQAANLKV*LFESDDSRFTIQNIEVSSFVLE-VKE*HYADLI 2902
+GSL ++ I +R L RE+H ++ V L E ++ + + V +++ +KE +
Sbjct: 1 MGSLAHISIGRRSLVREIHSLGDIGVRL-EVAETNALLAHFRVRPILMDKIKEAQSKNEF 59
Query: 2901 LLQLRDKV*QNEVTTFEVTKYGFLRFRG*LCISDIAGL*D*IMAEINYSCYSIHLGSNKM 2722
+++ + + F G LR+ L + D GL I+ E + + Y +H G+ KM
Sbjct: 60 VIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKM 119
Query: 2721 YHXXXXXXXXXXXXXXIVEFVPQWPNCQREMIEHQKLGGLL*NIEILM*KWEMVNIDFIT 2542
Y + EFV + CQ+ EHQK GLL + + KWE + +DF+T
Sbjct: 120 YQDLKEVYWWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVT 179
Query: 2541 G 2539
G
Sbjct: 180 G 180
Score = 52.0 bits (123), Expect(5) = 1e-64
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -2
Query: 2518 FDSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
+DSI +VV+RLT AHFL V+ T Y ++Y+ EIV+ HG+ + I+ D
Sbjct: 188 YDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSD 237
Score = 22.3 bits (46), Expect(5) = 1e-64
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 2124 PIGLFKVGEPESLGIYLVHQDREDKAY 2044
PIG +VGE + LG LV QD +K +
Sbjct: 329 PIGWLEVGERKLLGPELV-QDATEKIH 354
>gb|EOY19685.1| DNA/RNA polymerases superfamily protein, putative [Theobroma cacao]
Length = 1347
Score = 104 bits (259), Expect(4) = 1e-64
Identities = 56/110 (50%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
Frame = -1
Query: 2360 FQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYNNSY 2181
FQ+ LGT++ ST F+PQ DGQ+ERTI TLEDML CV+DF G WD + L+EF YNNS+
Sbjct: 1060 FQEALGTKLKFSTAFHPQTDGQSERTIQTLEDMLRACVIDFIGSWDRHLPLVEFAYNNSF 1119
Query: 2180 HSNIRLTLYEVRYERKCRSLLVCSR*ANQSHLEFIWSIRI--GKIKLIQE 2037
S+I + YE YERKCR+ L C + L + I + KIK+I+E
Sbjct: 1120 QSSIGMAPYEALYERKCRTPL-CWDEVGERKLVSVELIELTNDKIKVIRE 1168
Score = 100 bits (250), Expect(4) = 1e-64
Identities = 59/114 (51%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
Frame = -2
Query: 2023 SQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQM 1844
+Q R K +D QR+DLEF+ID VFLKV P KGV+RF ++ +L RYI P+RII RIG +
Sbjct: 1173 AQDRQKSNADKQRKDLEFEIDDKVFLKVSPWKGVIRFAKRGKLNPRYIGPFRIIERIGPV 1232
Query: 1843 AY*LRLYLELEFIHLIFYVSMLWKCVRDPSQVVPV-DIQIIEDLSYEKVLVAII 1685
AY L L EL+ IH +F+VSML K V DPS V+ I++ +DL +E V+I+
Sbjct: 1233 AYRLELPPELDRIHNVFHVSMLKKYVPDPSHVLEAPPIELHDDLKFEVQPVSIL 1286
Score = 92.4 bits (228), Expect(4) = 1e-64
Identities = 68/209 (32%), Positives = 101/209 (48%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+EL+KD D+ I YHP KANV+AD LSR+S SL LQ L + +L V L
Sbjct: 815 LELIKDYDLVIDYHPGKANVVADALSRKSSSSLAALQ---SCYFSALIEMKSLGVQLRNG 871
Query: 2985 DDSRFTIQNIEVSSFVLEVKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LCI 2806
+D I S + ++K+ +D L + K+ V+ F + L FR +C+
Sbjct: 872 EDGSVLANFIVRPSLLNQIKDIQRSDDELRKEIQKLTDGGVSEFRFGEDNVLMFRDRVCV 931
Query: 2805 SDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREMI 2626
+ L IM E + S Y+++ GS KMY + EFV + CQ+
Sbjct: 932 PEGNQLRQTIMEEAHSSAYALNPGSTKMYRTIRENYWWPGMKRDVAEFVAKCLVCQQVKA 991
Query: 2625 EHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EHQ+ G ++ +L KWE V +DF+ G
Sbjct: 992 EHQRPVGTFQSLPVLEWKWEHVTMDFVLG 1020
Score = 21.2 bits (43), Expect(4) = 1e-64
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 2419 IKEIVQFHGVRMCIIFD 2369
I EIV+ HGV + I+ D
Sbjct: 1031 IYEIVRLHGVLVSIVSD 1047
>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
Length = 1501
Score = 97.8 bits (242), Expect(4) = 3e-64
Identities = 44/82 (53%), Positives = 58/82 (70%)
Frame = -1
Query: 2369 YKGFQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYN 2190
+K Q LGT + +ST F+P DGQ ERT T+EDML C +DF+G W+D LIEF+YN
Sbjct: 1217 WKKVQANLGTTLKMSTAFHPATDGQTERTNQTMEDMLRACAIDFQGSWEDQLDLIEFSYN 1276
Query: 2189 NSYHSNIRLTLYEVRYERKCRS 2124
NSYH++I++ +E Y RKCRS
Sbjct: 1277 NSYHASIKMAPFEALYGRKCRS 1298
Score = 90.9 bits (224), Expect(4) = 3e-64
Identities = 64/209 (30%), Positives = 116/209 (55%), Gaps = 1/209 (0%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+EL+KD D++I YH KANV+AD LSR+S SL+ L + + L R++ + NL++
Sbjct: 944 LELIKDYDLDIQYHEGKANVVADALSRKSSHSLSTLIVPEE-LCRDM-KRLNLEILNPGE 1001
Query: 2985 DDSRFTIQNIEVSSFVLEVKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG*LCI 2806
++R + ++ VS F E+ E D L ++++K+ Q + F++ + G LRF+G C+
Sbjct: 1002 SEARLSNLSLGVSIFD-EIIEGQVGDEHLDKIKEKMKQGKEIDFKIHEDGSLRFKGRWCV 1060
Query: 2805 SDIAG-L*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQREM 2629
L +M E + + YS+H G +K+Y + E+V + CQ+
Sbjct: 1061 PQKCNDLKRRLMDEGHNTPYSVHPGGDKLYKDLKVIYWWPNMKREVAEYVSKCLTCQKVK 1120
Query: 2628 IEHQKLGGLL*NIEILM*KWEMVNIDFIT 2542
I+H++ G + +E+ KW+ +++DF+T
Sbjct: 1121 IDHKRPMGTVQPLEVPGWKWDSISMDFVT 1149
Score = 89.4 bits (220), Expect(4) = 3e-64
Identities = 49/114 (42%), Positives = 75/114 (65%), Gaps = 1/114 (0%)
Frame = -2
Query: 2023 SQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQM 1844
+Q R K Y+D++R++ EF + VFLKV P KGVMRF +K +L +Y+ PY I+ RIG++
Sbjct: 1333 AQDRQKSYADLKRREDEFAVGDKVFLKVSPTKGVMRFGKKGKLSAKYVGPYEILERIGKV 1392
Query: 1843 AY*LRLYLELEFIHLIFYVSMLWKCVRDPSQVV-PVDIQIIEDLSYEKVLVAII 1685
AY L L +E E +H +F++S L + + D V+ P +QI L+YE+ V I+
Sbjct: 1393 AYRLALPMEFEKMHDVFHISQLKRYIPDERHVLEPERVQIDSSLTYEERPVKIL 1446
Score = 39.7 bits (91), Expect(4) = 3e-64
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 2515 DSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
D+I V+V+RLT A F+ ++ T K YIK +V+ HGV II D
Sbjct: 1159 DTIWVIVDRLTKSAVFIPIKETWKKKQLATTYIKHVVRLHGVPKDIISD 1207
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 93.6 bits (231), Expect(4) = 4e-64
Identities = 52/116 (44%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Frame = -2
Query: 2023 SQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQM 1844
+QSR K Y+D +R++LEF +D V+L+V P++GV RF K +L R++ P+RII R G++
Sbjct: 2279 AQSRQKSYADNRRRNLEFAVDDFVYLRVTPLRGVHRFQTKGKLAPRFVGPFRIIARRGEV 2338
Query: 1843 AY*LRLYLELEFIHLIFYVSMLWKCVRDPS-QVVPVDIQIIEDLSYEKVLVAIILT 1679
AY L L L +H +F+VS L KC+R PS Q I++ EDL+Y + V I+ T
Sbjct: 2339 AYQLELPASLGNVHDVFHVSQLKKCLRVPSEQADSEQIEVREDLTYVERPVKILDT 2394
Score = 93.2 bits (230), Expect(4) = 4e-64
Identities = 74/213 (34%), Positives = 106/213 (49%), Gaps = 4/213 (1%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQ---AANLKV*L 2995
+EL+KD DV I YHP KANV+AD LSR+S + + R + EL+Q A NL +
Sbjct: 1894 LELIKDYDVGIHYHPGKANVVADALSRKSHCN----TLGVRGIPPELNQQMEALNLSI-- 1947
Query: 2994 FESDDSRFTIQNIEVSSFVL-EVKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG 2818
SR + +E +L +++E D + L + Q + F ++G L R
Sbjct: 1948 ----VSRGFLATLEAKPTLLDQIREAQKNDPDMRGLLKNMKQGKAAGFIEDEHGTLWNRN 2003
Query: 2817 *LCISDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQ 2638
+C+ D+ L I+ E + S YSIH GS KMY I EFV CQ
Sbjct: 2004 RVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQ 2063
Query: 2637 REMIEHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
R EHQ+ GLL +++ KW+ + +DFITG
Sbjct: 2064 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITG 2096
Score = 89.0 bits (219), Expect(4) = 4e-64
Identities = 43/85 (50%), Positives = 56/85 (65%)
Frame = -1
Query: 2369 YKGFQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYN 2190
+K Q+ LGT++N ST ++PQ DGQ ER LEDML CVLDF WD EF+YN
Sbjct: 2163 WKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVLDFGKTWDKSLPYAEFSYN 2222
Query: 2189 NSYHSNIRLTLYEVRYERKCRSLLV 2115
NSY ++I++ YE Y RKCR+ L+
Sbjct: 2223 NSYQASIQMAPYEALYGRKCRTPLL 2247
Score = 41.6 bits (96), Expect(4) = 4e-64
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -2
Query: 2518 FDSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
+DSI VVV+RLT +A F+ V+ T +LY IV HGV I+ D
Sbjct: 2104 YDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGVPKKIVSD 2153
Score = 49.3 bits (116), Expect(2) = 3e-09
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = -1
Query: 2348 LGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYNNSYHSNI 2169
LGT++ STT +PQ DGQ E TL ML + +W++ IEF YN S HS
Sbjct: 1348 LGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFAYNRSLHSTT 1407
Query: 2168 RLTLYEVRY 2142
++ +++ Y
Sbjct: 1408 KMCPFQIVY 1416
Score = 42.0 bits (97), Expect(2) = 3e-09
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = -2
Query: 2515 DSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
DSI VVV+R + +AHF+ T+ L+ +EIV+ HGV I+ D
Sbjct: 1283 DSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSD 1331
>gb|AAK51580.1|AC022352_16 Putative retroelement [Oryza sativa Japonica Group]
Length = 1023
Score = 93.6 bits (231), Expect(4) = 4e-64
Identities = 52/116 (44%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Frame = -2
Query: 2023 SQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQM 1844
+QSR K Y+D +R++LEF +D V+L+V P++GV RF K +L R++ P+RII R G++
Sbjct: 855 AQSRQKSYADNRRRNLEFAVDDFVYLRVTPLRGVHRFQTKGKLAPRFVGPFRIIARRGEV 914
Query: 1843 AY*LRLYLELEFIHLIFYVSMLWKCVRDPS-QVVPVDIQIIEDLSYEKVLVAIILT 1679
AY L L L +H +F+VS L KC+R PS Q I++ EDL+Y + V I+ T
Sbjct: 915 AYQLELPASLGNVHDVFHVSQLKKCLRVPSEQADSEQIEVREDLTYVERPVKILDT 970
Score = 93.2 bits (230), Expect(4) = 4e-64
Identities = 74/213 (34%), Positives = 106/213 (49%), Gaps = 4/213 (1%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQ---AANLKV*L 2995
+EL+KD DV I YHP KANV+AD LSR+S + + R + EL+Q A NL +
Sbjct: 470 LELIKDYDVGIHYHPGKANVVADALSRKSHCN----TLGVRGIPPELNQQMEALNLSI-- 523
Query: 2994 FESDDSRFTIQNIEVSSFVL-EVKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG 2818
SR + +E +L +++E D + L + Q + F ++G L R
Sbjct: 524 ----VSRGFLATLEAKPTLLDQIREAQKNDPDMRGLLKNMKQGKAAGFIEDEHGTLWNRN 579
Query: 2817 *LCISDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQ 2638
+C+ D+ L I+ E + S YSIH GS KMY I EFV CQ
Sbjct: 580 RVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQ 639
Query: 2637 REMIEHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
R EHQ+ GLL +++ KW+ + +DFITG
Sbjct: 640 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITG 672
Score = 89.0 bits (219), Expect(4) = 4e-64
Identities = 43/85 (50%), Positives = 56/85 (65%)
Frame = -1
Query: 2369 YKGFQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYN 2190
+K Q+ LGT++N ST ++PQ DGQ ER LEDML CVLDF WD EF+YN
Sbjct: 739 WKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVLDFGKTWDKSLPYAEFSYN 798
Query: 2189 NSYHSNIRLTLYEVRYERKCRSLLV 2115
NSY ++I++ YE Y RKCR+ L+
Sbjct: 799 NSYQASIQMAPYEALYGRKCRTPLL 823
Score = 41.6 bits (96), Expect(4) = 4e-64
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -2
Query: 2518 FDSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
+DSI VVV+RLT +A F+ V+ T +LY IV HGV I+ D
Sbjct: 680 YDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGVPKKIVSD 729
>gb|ABB47095.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 998
Score = 93.6 bits (231), Expect(4) = 4e-64
Identities = 52/116 (44%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Frame = -2
Query: 2023 SQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYRIICRIGQM 1844
+QSR K Y+D +R++LEF +D V+L+V P++GV RF K +L R++ P+RII R G++
Sbjct: 830 AQSRQKSYADNRRRNLEFAVDDFVYLRVTPLRGVHRFQTKGKLAPRFVGPFRIIARRGEV 889
Query: 1843 AY*LRLYLELEFIHLIFYVSMLWKCVRDPS-QVVPVDIQIIEDLSYEKVLVAIILT 1679
AY L L L +H +F+VS L KC+R PS Q I++ EDL+Y + V I+ T
Sbjct: 890 AYQLELPASLGNVHDVFHVSQLKKCLRVPSEQADSEQIEVREDLTYVERPVKILDT 945
Score = 93.2 bits (230), Expect(4) = 4e-64
Identities = 74/213 (34%), Positives = 106/213 (49%), Gaps = 4/213 (1%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQ---AANLKV*L 2995
+EL+KD DV I YHP KANV+AD LSR+S + + R + EL+Q A NL +
Sbjct: 445 LELIKDYDVGIHYHPGKANVVADALSRKSHCN----TLGVRGIPPELNQQMEALNLSI-- 498
Query: 2994 FESDDSRFTIQNIEVSSFVL-EVKE*HYADLILLQLRDKV*QNEVTTFEVTKYGFLRFRG 2818
SR + +E +L +++E D + L + Q + F ++G L R
Sbjct: 499 ----VSRGFLATLEAKPTLLDQIREAQKNDPDMRGLLKNMKQGKAAGFIEDEHGTLWNRN 554
Query: 2817 *LCISDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQ 2638
+C+ D+ L I+ E + S YSIH GS KMY I EFV CQ
Sbjct: 555 RVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQ 614
Query: 2637 REMIEHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
R EHQ+ GLL +++ KW+ + +DFITG
Sbjct: 615 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITG 647
Score = 89.0 bits (219), Expect(4) = 4e-64
Identities = 43/85 (50%), Positives = 56/85 (65%)
Frame = -1
Query: 2369 YKGFQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYN 2190
+K Q+ LGT++N ST ++PQ DGQ ER LEDML CVLDF WD EF+YN
Sbjct: 714 WKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVLDFGKTWDKSLPYAEFSYN 773
Query: 2189 NSYHSNIRLTLYEVRYERKCRSLLV 2115
NSY ++I++ YE Y RKCR+ L+
Sbjct: 774 NSYQASIQMAPYEALYGRKCRTPLL 798
Score = 41.6 bits (96), Expect(4) = 4e-64
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -2
Query: 2518 FDSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
+DSI VVV+RLT +A F+ V+ T +LY IV HGV I+ D
Sbjct: 655 YDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGVPKKIVSD 704
>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
Length = 1387
Score = 100 bits (249), Expect(4) = 2e-63
Identities = 49/84 (58%), Positives = 57/84 (67%)
Frame = -1
Query: 2369 YKGFQKGLGTQINLSTTFNPQIDGQAERTI*TLEDMLGECVLDFKGIWDDYFLLIEFTYN 2190
++ Q+ LGTQ+N ST F+PQ DGQ+ER I LEDML CVLDF G W DY L EF YN
Sbjct: 1112 WQSLQRTLGTQLNFSTAFHPQTDGQSERVIQILEDMLRACVLDFGGNWADYLPLAEFAYN 1171
Query: 2189 NSYHSNIRLTLYEVRYERKCRSLL 2118
NSY S+I + YE Y R CRS L
Sbjct: 1172 NSYQSSIGMXTYEALYGRPCRSPL 1195
Score = 91.7 bits (226), Expect(4) = 2e-63
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = -2
Query: 2047 LFKSDYGHSQSRHKLYSDVQRQDLEFQIDYLVFLKVLPMKGVMRFDRKCRL**RYIAPYR 1868
L K +Q R K Y+D +R+ LEF+ VF+KV P +G+ RF +K +L R++ P++
Sbjct: 1220 LIKEKLKTAQDRQKSYADKRRRPLEFEEGDWVFVKVSPRRGIFRFGKKGKLAPRFVGPFQ 1279
Query: 1867 IICRIGQMAY*LRLYLELEFIHLIFYVSMLWKCVRDPSQVVPV-DIQIIEDLSY 1709
I R+G +AY L L +L +H +F+VSML KC DP+ VV + D+QI ED SY
Sbjct: 1280 IDKRVGPVAYKLILPQQLSLVHDVFHVSMLRKCTPDPTWVVDMQDVQISEDTSY 1333
Score = 75.9 bits (185), Expect(4) = 2e-63
Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 2/211 (0%)
Frame = -3
Query: 3165 IELLKDCDVEIIYHPRKANVLADTLSRRSIGSLTYLQIKKRVLARELHQAANLKV*LFES 2986
+E L+D D + YHP KANV+AD LSR+S+G L+ L++++ E+H
Sbjct: 850 METLEDYDFALHYHPGKANVVADALSRKSVGQLSSLELRE----FEMHTVIEDFELCLGL 905
Query: 2985 DDSRFTIQNIEVSSFVLE-VKE*HYADLILLQLRDKV*QNEV-TTFEVTKYGFLRFRG*L 2812
+ + +I V++ + E D L +++ ++ E+ + + + G +RF+G L
Sbjct: 906 EGHGPCLYSISARPXVIQRIVEAQVHDEFLEKVKTQLVAGEIDENWSMYEDGSVRFKGRL 965
Query: 2811 CISDIAGL*D*IMAEINYSCYSIHLGSNKMYHXXXXXXXXXXXXXXIVEFVPQWPNCQRE 2632
C+ L + ++A+ + + Y+IH G+ K+ I +FV CQ+
Sbjct: 966 CVPKDVELRNELLADAHRAKYTIHPGNTKI-----------GMKKDIAQFVANCQICQQV 1014
Query: 2631 MIEHQKLGGLL*NIEILM*KWEMVNIDFITG 2539
EHQ+ GLL + I KW+ + +DF+ G
Sbjct: 1015 KAEHQRPAGLLQPLPIPEWKWDNITMDFVIG 1045
Score = 47.0 bits (110), Expect(4) = 2e-63
Identities = 20/51 (39%), Positives = 34/51 (66%)
Frame = -2
Query: 2521 KFDSILVVVNRLTNLAHFLAVRVTNMIKDYVKLYIKEIVQFHGVRMCIIFD 2369
K + + ++V+RLT HFLA++ + + KLYI+EIV+ HG+ + I+ D
Sbjct: 1052 KKNGVWMIVDRLTKSTHFLAMKTIDSMNSLAKLYIQEIVRLHGIPVSIVSD 1102